HEADER TRANSPORT PROTEIN 27-JAN-16 5HU6 TITLE STRUCTURE OF THE T. BRUCEI HAPTOGLOBIN-HAEMOGLOBIN RECEPTOR BOUND TO TITLE 2 HUMAN HAPTOLGOBIN-HAEMOGLOBIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-GLOBIN,HEMOGLOBIN ALPHA CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEMOGLOBIN SUBUNIT BETA; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: BETA-GLOBIN,HEMOGLOBIN BETA CHAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HAPTOGLOBIN; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: ZONULIN; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: HAPTOGLOBIN-HEMOGLOBIN RECEPTOR; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HBA1, HBA2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: HBB; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: HP; SOURCE 22 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 23 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 27 ORGANISM_TAXID: 5702; SOURCE 28 GENE: HPHBR; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRYPANOSOME HAPTOGLOBIN-HAEMOGLOBIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LANE-SERFF,M.K.HIGGINS REVDAT 3 10-JAN-24 5HU6 1 HETSYN REVDAT 2 29-JUL-20 5HU6 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 02-MAR-16 5HU6 0 SPRSDE 02-MAR-16 5HU6 4X0I JRNL AUTH H.LANE-SERFF,P.MACGREGOR,E.D.LOWE,M.CARRINGTON,M.K.HIGGINS JRNL TITL STRUCTURAL BASIS FOR LIGAND AND INNATE IMMUNITY FACTOR JRNL TITL 2 UPTAKE BY THE TRYPANOSOME HAPTOGLOBIN-HAEMOGLOBIN RECEPTOR. JRNL REF ELIFE V. 3 05553 2014 JRNL REFN ESSN 2050-084X JRNL PMID 25497229 JRNL DOI 10.7554/ELIFE.05553 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 18253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 923 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.68 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2891 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2357 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2772 REMARK 3 BIN R VALUE (WORKING SET) : 0.2351 REMARK 3 BIN FREE R VALUE : 0.2483 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.12 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 119 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5998 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 118 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.68680 REMARK 3 B22 (A**2) : 18.15270 REMARK 3 B33 (A**2) : -5.46590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.09890 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.441 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.368 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6248 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8494 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2166 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 148 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 906 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6248 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 814 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7142 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.61 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.48 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 53.1255 36.0395 12.3792 REMARK 3 T TENSOR REMARK 3 T11: -0.1940 T22: -0.0010 REMARK 3 T33: -0.0032 T12: -0.1643 REMARK 3 T13: -0.1175 T23: -0.1283 REMARK 3 L TENSOR REMARK 3 L11: 3.5190 L22: 2.1363 REMARK 3 L33: 4.3148 L12: -0.0473 REMARK 3 L13: -1.3214 L23: -0.3133 REMARK 3 S TENSOR REMARK 3 S11: -0.0337 S12: -0.3356 S13: 0.2747 REMARK 3 S21: -0.0040 S22: -0.0014 S23: -0.7398 REMARK 3 S31: -0.4541 S32: 0.7668 S33: 0.0351 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 42.5060 17.1937 23.2236 REMARK 3 T TENSOR REMARK 3 T11: -0.0516 T22: -0.1596 REMARK 3 T33: 0.0672 T12: 0.2413 REMARK 3 T13: -0.0797 T23: 0.0996 REMARK 3 L TENSOR REMARK 3 L11: 5.1620 L22: 1.2914 REMARK 3 L33: 4.2697 L12: 1.1825 REMARK 3 L13: -3.0346 L23: -1.0092 REMARK 3 S TENSOR REMARK 3 S11: -0.4235 S12: -0.5726 S13: -0.9651 REMARK 3 S21: 0.2547 S22: 0.0185 S23: -0.3208 REMARK 3 S31: 0.6491 S32: 0.8791 S33: 0.4050 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 25.3883 34.7680 -2.3998 REMARK 3 T TENSOR REMARK 3 T11: -0.0995 T22: -0.1772 REMARK 3 T33: -0.0649 T12: -0.0750 REMARK 3 T13: -0.0992 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 2.6026 L22: 2.2221 REMARK 3 L33: 3.7942 L12: 0.4616 REMARK 3 L13: 0.5022 L23: 0.2611 REMARK 3 S TENSOR REMARK 3 S11: -0.3381 S12: 0.4206 S13: 0.0516 REMARK 3 S21: -0.2061 S22: 0.4021 S23: 0.1679 REMARK 3 S31: -0.3995 S32: -0.1481 S33: -0.0640 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 10.6630 31.6901 24.7413 REMARK 3 T TENSOR REMARK 3 T11: -0.1063 T22: -0.1974 REMARK 3 T33: 0.1142 T12: 0.1603 REMARK 3 T13: 0.1070 T23: 0.1617 REMARK 3 L TENSOR REMARK 3 L11: 0.7933 L22: 4.9748 REMARK 3 L33: 0.4044 L12: -2.0449 REMARK 3 L13: 0.1271 L23: 0.5090 REMARK 3 S TENSOR REMARK 3 S11: -0.0906 S12: -0.1318 S13: -0.2216 REMARK 3 S21: 0.2918 S22: 0.1424 S23: 0.4108 REMARK 3 S31: 0.1429 S32: -0.1665 S33: -0.0519 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HU6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.975 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18486 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 66.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XOL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% V/V MPD, 0.03 M NABR, 0.03M NAI, REMARK 280 0.03M NAF, 0.1 M MES/IMIDAZOLE PH 6.5, 12.5% W/V PEG 1000, 12.5% REMARK 280 W/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 111.14500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.28000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 111.14500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.28000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN C 154 REMARK 465 PRO C 155 REMARK 465 ALA C 156 REMARK 465 ASN C 157 REMARK 465 PRO C 158 REMARK 465 VAL C 159 REMARK 465 GLN C 160 REMARK 465 ARG C 161 REMARK 465 ILE C 162 REMARK 465 LEU C 163 REMARK 465 GLY C 164 REMARK 465 GLY C 165 REMARK 465 HIS C 166 REMARK 465 LEU C 167 REMARK 465 ASP C 168 REMARK 465 ALA C 169 REMARK 465 LYS C 170 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS B 78 40.66 -141.83 REMARK 500 CYS B 94 -71.46 -71.83 REMARK 500 ASN C 241 51.89 -117.09 REMARK 500 ASN C 259 -166.72 -161.96 REMARK 500 ALA C 273 49.77 -86.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 88 NE2 REMARK 620 2 HEM A 201 NA 100.2 REMARK 620 3 HEM A 201 NB 87.0 87.6 REMARK 620 4 HEM A 201 NC 101.1 156.7 84.2 REMARK 620 5 HEM A 201 ND 98.2 92.5 174.7 93.7 REMARK 620 6 OXY A 202 O1 172.2 78.6 85.3 79.1 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 93 NE2 REMARK 620 2 HEM B 201 NA 102.0 REMARK 620 3 HEM B 201 NB 91.5 88.4 REMARK 620 4 HEM B 201 NC 95.8 161.6 86.6 REMARK 620 5 HEM B 201 ND 87.0 93.0 178.0 92.4 REMARK 620 6 OXY B 202 O1 175.4 77.8 93.2 84.9 88.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4X0I RELATED DB: PDB REMARK 900 RE-REFINEMENT DBREF 5HU6 A 2 142 UNP P69905 HBA_HUMAN 2 142 DBREF 5HU6 B 3 143 UNP P68871 HBB_HUMAN 3 143 DBREF 5HU6 C 148 406 UNP P00738 HPT_HUMAN 148 406 DBREF 5HU6 D 38 297 UNP I7B1A7 I7B1A7_TRYBB 38 297 SEQADV 5HU6 GLY D 252 UNP I7B1A7 ASP 252 CONFLICT SEQRES 1 A 141 VAL LEU SER PRO ALA ASP LYS THR ASN VAL LYS ALA ALA SEQRES 2 A 141 TRP GLY LYS VAL GLY ALA HIS ALA GLY GLU TYR GLY ALA SEQRES 3 A 141 GLU ALA LEU GLU ARG MET PHE LEU SER PHE PRO THR THR SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER SEQRES 5 A 141 ALA GLN VAL LYS GLY HIS GLY LYS LYS VAL ALA ASP ALA SEQRES 6 A 141 LEU THR ASN ALA VAL ALA HIS VAL ASP ASP MET PRO ASN SEQRES 7 A 141 ALA LEU SER ALA LEU SER ASP LEU HIS ALA HIS LYS LEU SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU SER HIS CYS SEQRES 9 A 141 LEU LEU VAL THR LEU ALA ALA HIS LEU PRO ALA GLU PHE SEQRES 10 A 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE LEU ALA SEQRES 11 A 141 SER VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 B 141 HIS LEU THR PRO GLU GLU LYS SER ALA VAL THR ALA LEU SEQRES 2 B 141 TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU ALA SEQRES 3 B 141 LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN ARG SEQRES 4 B 141 PHE PHE GLU SER PHE GLY ASP LEU SER THR PRO ASP ALA SEQRES 5 B 141 VAL MET GLY ASN PRO LYS VAL LYS ALA HIS GLY LYS LYS SEQRES 6 B 141 VAL LEU GLY ALA PHE SER ASP GLY LEU ALA HIS LEU ASP SEQRES 7 B 141 ASN LEU LYS GLY THR PHE ALA THR LEU SER GLU LEU HIS SEQRES 8 B 141 CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG LEU SEQRES 9 B 141 LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS PHE SEQRES 10 B 141 GLY LYS GLU PHE THR PRO PRO VAL GLN ALA ALA TYR GLN SEQRES 11 B 141 LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA SEQRES 1 C 259 VAL CYS GLY LYS PRO LYS ASN PRO ALA ASN PRO VAL GLN SEQRES 2 C 259 ARG ILE LEU GLY GLY HIS LEU ASP ALA LYS GLY SER PHE SEQRES 3 C 259 PRO TRP GLN ALA LYS MET VAL SER HIS HIS ASN LEU THR SEQRES 4 C 259 THR GLY ALA THR LEU ILE ASN GLU GLN TRP LEU LEU THR SEQRES 5 C 259 THR ALA LYS ASN LEU PHE LEU ASN HIS SER GLU ASN ALA SEQRES 6 C 259 THR ALA LYS ASP ILE ALA PRO THR LEU THR LEU TYR VAL SEQRES 7 C 259 GLY LYS LYS GLN LEU VAL GLU ILE GLU LYS VAL VAL LEU SEQRES 8 C 259 HIS PRO ASN TYR SER GLN VAL ASP ILE GLY LEU ILE LYS SEQRES 9 C 259 LEU LYS GLN LYS VAL SER VAL ASN GLU ARG VAL MET PRO SEQRES 10 C 259 ILE CYS LEU PRO SER LYS ASP TYR ALA GLU VAL GLY ARG SEQRES 11 C 259 VAL GLY TYR VAL SER GLY TRP GLY ARG ASN ALA ASN PHE SEQRES 12 C 259 LYS PHE THR ASP HIS LEU LYS TYR VAL MET LEU PRO VAL SEQRES 13 C 259 ALA ASP GLN ASP GLN CYS ILE ARG HIS TYR GLU GLY SER SEQRES 14 C 259 THR VAL PRO GLU LYS LYS THR PRO LYS SER PRO VAL GLY SEQRES 15 C 259 VAL GLN PRO ILE LEU ASN GLU HIS THR PHE CYS ALA GLY SEQRES 16 C 259 MET SER LYS TYR GLN GLU ASP THR CYS TYR GLY ASP ALA SEQRES 17 C 259 GLY SER ALA PHE ALA VAL HIS ASP LEU GLU GLU ASP THR SEQRES 18 C 259 TRP TYR ALA THR GLY ILE LEU SER PHE ASP LYS SER CYS SEQRES 19 C 259 ALA VAL ALA GLU TYR GLY VAL TYR VAL LYS VAL THR SER SEQRES 20 C 259 ILE GLN ASP TRP VAL GLN LYS THR ILE ALA GLU ASN SEQRES 1 D 260 GLY LEU LYS THR LYS ASP GLU VAL GLU LYS ALA CYS HIS SEQRES 2 D 260 LEU ALA GLN GLN LEU LYS GLU VAL SER ILE THR LEU GLY SEQRES 3 D 260 VAL ILE TYR ARG THR THR GLU ARG HIS SER VAL GLN VAL SEQRES 4 D 260 GLU ALA HIS LYS THR ALA ILE ASP LYS HIS ALA ASP ALA SEQRES 5 D 260 VAL SER ARG ALA VAL GLU ALA LEU THR ARG VAL ASP VAL SEQRES 6 D 260 ALA LEU GLN ARG LEU LYS GLU LEU GLY LYS ALA ASN ASP SEQRES 7 D 260 THR LYS ALA VAL LYS ILE ILE GLU ASN ILE THR SER ALA SEQRES 8 D 260 ARG GLU ASN LEU ALA LEU PHE ASN ASN GLU THR GLN ALA SEQRES 9 D 260 VAL LEU THR ALA ARG ASP HIS VAL HIS LYS HIS ARG ALA SEQRES 10 D 260 ALA ALA LEU GLN GLY TRP SER ASP ALA LYS GLU LYS GLY SEQRES 11 D 260 ASP ALA ALA ALA GLU ASP VAL TRP VAL LEU LEU ASN ALA SEQRES 12 D 260 ALA LYS LYS GLY ASN GLY SER ALA ASP ALA LYS ALA ALA SEQRES 13 D 260 ALA GLU LYS CYS SER ARG TYR SER SER SER SER THR SER SEQRES 14 D 260 GLU THR GLU LEU GLN LYS ALA ILE ASP ALA ALA ALA ASN SEQRES 15 D 260 VAL GLY GLY LEU SER ALA HIS LYS SER LYS TYR GLY ASP SEQRES 16 D 260 VAL LEU ASN LYS PHE LYS LEU SER ASN ALA SER VAL GLY SEQRES 17 D 260 ALA VAL ARG ASP THR SER GLY ARG GLY GLY LYS HIS MET SEQRES 18 D 260 GLU LYS VAL ASN ASN VAL ALA LYS LEU LEU LYS ASP ALA SEQRES 19 D 260 GLU VAL SER LEU ALA ALA ALA ALA ALA GLU ILE GLU GLU SEQRES 20 D 260 VAL LYS ASN ALA HIS GLU THR LYS VAL GLN GLU GLU MET HET HEM A 201 43 HET OXY A 202 2 HET HEM B 201 43 HET OXY B 202 2 HET NAG C 501 14 HET NAG C 502 14 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OXY OXYGEN MOLECULE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN HEM HEME HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 HEM 2(C34 H32 FE N4 O4) FORMUL 6 OXY 2(O2) FORMUL 9 NAG 2(C8 H15 N O6) HELIX 1 AA1 SER A 4 GLY A 19 1 16 HELIX 2 AA2 HIS A 21 PHE A 37 1 17 HELIX 3 AA3 PRO A 38 PHE A 44 5 7 HELIX 4 AA4 SER A 53 HIS A 73 1 21 HELIX 5 AA5 ASP A 76 LEU A 81 1 6 HELIX 6 AA6 LEU A 81 HIS A 90 1 10 HELIX 7 AA7 PRO A 96 LEU A 114 1 19 HELIX 8 AA8 THR A 119 SER A 139 1 21 HELIX 9 AA9 THR B 5 GLY B 17 1 13 HELIX 10 AB1 GLU B 23 TYR B 36 1 14 HELIX 11 AB2 PRO B 37 GLY B 47 5 11 HELIX 12 AB3 THR B 51 ASN B 58 1 8 HELIX 13 AB4 ASN B 58 ALA B 77 1 20 HELIX 14 AB5 ASN B 81 PHE B 86 1 6 HELIX 15 AB6 PHE B 86 LYS B 96 1 11 HELIX 16 AB7 PRO B 101 GLY B 120 1 20 HELIX 17 AB8 LYS B 121 PHE B 123 5 3 HELIX 18 AB9 THR B 124 ALA B 143 1 20 HELIX 19 AC1 THR C 200 LEU C 206 1 7 HELIX 20 AC2 THR C 213 ALA C 218 1 6 HELIX 21 AC3 PRO C 219 LEU C 221 5 3 HELIX 22 AC4 ASP C 305 GLY C 315 1 11 HELIX 23 AC5 VAL C 318 LYS C 322 5 5 HELIX 24 AC6 ILE C 395 ASN C 406 1 12 HELIX 25 AC7 THR D 41 ARG D 67 1 27 HELIX 26 AC8 THR D 69 VAL D 90 1 22 HELIX 27 AC9 VAL D 90 LEU D 110 1 21 HELIX 28 AD1 ASP D 115 ALA D 181 1 67 HELIX 29 AD2 SER D 187 CYS D 197 1 11 HELIX 30 AD3 SER D 206 ALA D 218 1 13 HELIX 31 AD4 VAL D 220 ALA D 225 1 6 HELIX 32 AD5 HIS D 226 MET D 297 1 72 SHEET 1 AA1 7 GLN C 229 VAL C 231 0 SHEET 2 AA1 7 THR C 222 VAL C 225 -1 N VAL C 225 O GLN C 229 SHEET 3 AA1 7 GLN C 176 VAL C 180 -1 N VAL C 180 O THR C 222 SHEET 4 AA1 7 THR C 186 ASN C 193 -1 O THR C 187 N MET C 179 SHEET 5 AA1 7 TRP C 196 THR C 199 -1 O LEU C 198 N THR C 190 SHEET 6 AA1 7 GLY C 248 LEU C 252 -1 O ILE C 250 N LEU C 197 SHEET 7 AA1 7 ILE C 233 LEU C 238 -1 N LYS C 235 O LYS C 251 SHEET 1 AA2 6 LYS C 297 PRO C 302 0 SHEET 2 AA2 6 VAL C 278 GLY C 283 -1 N GLY C 279 O LEU C 301 SHEET 3 AA2 6 ALA C 358 ASP C 363 -1 O ALA C 360 N TYR C 280 SHEET 4 AA2 6 THR C 368 PHE C 377 -1 O THR C 368 N ASP C 363 SHEET 5 AA2 6 GLY C 387 LYS C 391 -1 O VAL C 390 N ILE C 374 SHEET 6 AA2 6 THR C 338 ALA C 341 -1 N PHE C 339 O TYR C 389 SSBOND 1 CYS C 149 CYS C 266 1555 1555 2.77 SSBOND 2 CYS C 309 CYS C 340 1555 1555 2.27 SSBOND 3 CYS C 351 CYS C 381 1555 1555 2.35 SSBOND 4 CYS D 49 CYS D 197 1555 1555 2.56 LINK ND2 ASN C 184 C1 NAG C 501 1555 1555 1.44 LINK ND2 ASN C 241 C1 NAG C 502 1555 1555 1.44 LINK NE2 HIS A 88 FE HEM A 201 1555 1555 2.08 LINK FE HEM A 201 O1 OXY A 202 1555 1555 2.20 LINK NE2 HIS B 93 FE HEM B 201 1555 1555 2.32 LINK FE HEM B 201 O1 OXY B 202 1555 1555 2.11 CRYST1 222.290 56.560 66.100 90.00 92.97 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004499 0.000000 0.000233 0.00000 SCALE2 0.000000 0.017680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015149 0.00000