HEADER TRANSFERASE/TRANSFERASE INHIBITOR 27-JAN-16 5HU9 TITLE CRYSTAL STRUCTURE OF ABL1 IN COMPLEX WITH CHMFL-074 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 229-500; COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1,ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1,PROTO-ONCOGENE C-ABL,P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL1, ABL, JTK7; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9 KEYWDS ABL, BCR-ABL, CHMFL-074, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.L.KONG,C.H.YUN REVDAT 3 08-NOV-23 5HU9 1 REMARK REVDAT 2 28-DEC-16 5HU9 1 JRNL REVDAT 1 13-JUL-16 5HU9 0 JRNL AUTH F.LIU,B.WANG,Q.WANG,Z.QI,C.CHEN,L.L.KONG,J.Y.CHEN,X.LIU, JRNL AUTH 2 A.WANG,C.HU,W.WANG,H.WANG,F.WU,Y.RUAN,S.QI,J.LIU,F.ZOU,Z.HU, JRNL AUTH 3 W.WANG,L.WANG,S.ZHANG,C.H.YUN,Z.ZHAI,J.LIU,Q.LIU JRNL TITL DISCOVERY AND CHARACTERIZATION OF A NOVEL POTENT TYPE II JRNL TITL 2 NATIVE AND MUTANT BCR-ABL INHIBITOR (CHMFL-074) FOR CHRONIC JRNL TITL 3 MYELOID LEUKEMIA (CML) JRNL REF ONCOTARGET V. 7 45562 2016 JRNL REFN ESSN 1949-2553 JRNL PMID 27322145 JRNL DOI 10.18632/ONCOTARGET.10037 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 44782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.5748 - 3.8525 0.99 2881 173 0.1556 0.1738 REMARK 3 2 3.8525 - 3.0581 1.00 2821 137 0.1532 0.1575 REMARK 3 3 3.0581 - 2.6716 1.00 2757 164 0.1942 0.1767 REMARK 3 4 2.6716 - 2.4273 1.00 2758 129 0.1939 0.2009 REMARK 3 5 2.4273 - 2.2534 1.00 2732 143 0.1927 0.1968 REMARK 3 6 2.2534 - 2.1205 1.00 2718 133 0.2004 0.2021 REMARK 3 7 2.1205 - 2.0143 1.00 2718 154 0.1959 0.2174 REMARK 3 8 2.0143 - 1.9266 1.00 2720 133 0.2080 0.2240 REMARK 3 9 1.9266 - 1.8525 0.99 2684 138 0.2146 0.2461 REMARK 3 10 1.8525 - 1.7885 0.99 2645 150 0.2236 0.2486 REMARK 3 11 1.7885 - 1.7326 0.98 2659 139 0.2256 0.2786 REMARK 3 12 1.7326 - 1.6831 0.95 2599 146 0.2393 0.2493 REMARK 3 13 1.6831 - 1.6388 0.96 2572 119 0.2419 0.2741 REMARK 3 14 1.6388 - 1.5988 0.92 2507 128 0.2480 0.2489 REMARK 3 15 1.5988 - 1.5624 0.91 2485 136 0.2540 0.2953 REMARK 3 16 1.5624 - 1.5292 0.85 2258 146 0.2670 0.2869 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.064 2450 REMARK 3 ANGLE : 1.680 3315 REMARK 3 CHIRALITY : 0.174 342 REMARK 3 PLANARITY : 0.011 409 REMARK 3 DIHEDRAL : 22.393 918 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44923 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.529 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CS9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M POTASSIUM THIOCYANATE, 28% REMARK 280 PEG2000, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.14750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.14750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 18.92600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.21750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 18.92600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.21750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.14750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 18.92600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.21750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 73.14750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 18.92600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.21750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 852 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 998 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1045 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 224 REMARK 465 THR A 389 REMARK 465 GLY A 390 REMARK 465 ASP A 391 REMARK 465 THR A 392 REMARK 465 TYR A 393 REMARK 465 SER A 500 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 226 SD CE REMARK 470 SER A 228 OG REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 ARG A 386 CZ NH1 NH2 REMARK 470 THR A 394 OG1 CG2 REMARK 470 GLN A 447 OE1 NE2 REMARK 470 GLU A 450 CG CD OE1 OE2 REMARK 470 GLU A 462 CD OE1 OE2 REMARK 470 LYS A 467 CD CE NZ REMARK 470 GLN A 498 CD OE1 NE2 REMARK 470 GLU A 499 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 349 N SER A 349 CA -0.137 REMARK 500 GLU A 494 C THR A 495 N 0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 245 -158.60 -97.18 REMARK 500 ARG A 362 -11.30 83.46 REMARK 500 ASP A 363 43.95 -150.16 REMARK 500 ASP A 455 16.08 80.22 REMARK 500 GLN A 498 0.66 94.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1061 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1062 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A1063 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A1064 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A1065 DISTANCE = 7.43 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 66K A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 66K A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 615 DBREF 5HU9 A 229 500 UNP P00519 ABL1_HUMAN 229 500 SEQADV 5HU9 GLY A 224 UNP P00519 EXPRESSION TAG SEQADV 5HU9 ALA A 225 UNP P00519 EXPRESSION TAG SEQADV 5HU9 MET A 226 UNP P00519 EXPRESSION TAG SEQADV 5HU9 GLY A 227 UNP P00519 EXPRESSION TAG SEQADV 5HU9 SER A 228 UNP P00519 EXPRESSION TAG SEQRES 1 A 277 GLY ALA MET GLY SER SER PRO ASN TYR ASP LYS TRP GLU SEQRES 2 A 277 MET GLU ARG THR ASP ILE THR MET LYS HIS LYS LEU GLY SEQRES 3 A 277 GLY GLY GLN TYR GLY GLU VAL TYR GLU GLY VAL TRP LYS SEQRES 4 A 277 LYS TYR SER LEU THR VAL ALA VAL LYS THR LEU LYS GLU SEQRES 5 A 277 ASP THR MET GLU VAL GLU GLU PHE LEU LYS GLU ALA ALA SEQRES 6 A 277 VAL MET LYS GLU ILE LYS HIS PRO ASN LEU VAL GLN LEU SEQRES 7 A 277 LEU GLY VAL CYS THR ARG GLU PRO PRO PHE TYR ILE ILE SEQRES 8 A 277 THR GLU PHE MET THR TYR GLY ASN LEU LEU ASP TYR LEU SEQRES 9 A 277 ARG GLU CYS ASN ARG GLN GLU VAL ASN ALA VAL VAL LEU SEQRES 10 A 277 LEU TYR MET ALA THR GLN ILE SER SER ALA MET GLU TYR SEQRES 11 A 277 LEU GLU LYS LYS ASN PHE ILE HIS ARG ASP LEU ALA ALA SEQRES 12 A 277 ARG ASN CYS LEU VAL GLY GLU ASN HIS LEU VAL LYS VAL SEQRES 13 A 277 ALA ASP PHE GLY LEU SER ARG LEU MET THR GLY ASP THR SEQRES 14 A 277 TYR THR ALA HIS ALA GLY ALA LYS PHE PRO ILE LYS TRP SEQRES 15 A 277 THR ALA PRO GLU SER LEU ALA TYR ASN LYS PHE SER ILE SEQRES 16 A 277 LYS SER ASP VAL TRP ALA PHE GLY VAL LEU LEU TRP GLU SEQRES 17 A 277 ILE ALA THR TYR GLY MET SER PRO TYR PRO GLY ILE ASP SEQRES 18 A 277 LEU SER GLN VAL TYR GLU LEU LEU GLU LYS ASP TYR ARG SEQRES 19 A 277 MET GLU ARG PRO GLU GLY CYS PRO GLU LYS VAL TYR GLU SEQRES 20 A 277 LEU MET ARG ALA CYS TRP GLN TRP ASN PRO SER ASP ARG SEQRES 21 A 277 PRO SER PHE ALA GLU ILE HIS GLN ALA PHE GLU THR MET SEQRES 22 A 277 PHE GLN GLU SER HET 66K A 601 43 HET 66K A 602 43 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO A 607 4 HET EDO A 608 4 HET EDO A 609 4 HET EDO A 610 4 HET EDO A 611 4 HET EDO A 612 4 HET EDO A 613 4 HET EDO A 614 4 HET CL A 615 1 HETNAM 66K 4-[(4-METHYLPIPERAZIN-1-YL)METHYL]-N-(4-METHYL-3-{[1- HETNAM 2 66K (PYRIDIN-3-YLCARBONYL)PIPERIDIN-4-YL]OXY}PHENYL)-3- HETNAM 3 66K (TRIFLUOROMETHYL)BENZAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 66K 2(C32 H36 F3 N5 O3) FORMUL 4 EDO 12(C2 H6 O2) FORMUL 16 CL CL 1- FORMUL 17 HOH *365(H2 O) HELIX 1 AA1 GLU A 238 THR A 240 5 3 HELIX 2 AA2 GLY A 249 GLN A 252 5 4 HELIX 3 AA3 LYS A 263 SER A 265 5 3 HELIX 4 AA4 GLU A 279 LYS A 291 1 13 HELIX 5 AA5 ASN A 322 CYS A 330 1 9 HELIX 6 AA6 ASN A 336 LYS A 357 1 22 HELIX 7 AA7 ALA A 365 ARG A 367 5 3 HELIX 8 AA8 GLU A 373 HIS A 375 5 3 HELIX 9 AA9 PRO A 402 THR A 406 5 5 HELIX 10 AB1 ALA A 407 ASN A 414 1 8 HELIX 11 AB2 SER A 417 THR A 434 1 18 HELIX 12 AB3 ASP A 444 SER A 446 5 3 HELIX 13 AB4 GLN A 447 LYS A 454 1 8 HELIX 14 AB5 PRO A 465 TRP A 476 1 12 HELIX 15 AB6 ASN A 479 ARG A 483 5 5 HELIX 16 AB7 SER A 485 PHE A 497 1 13 SHEET 1 AA1 5 ILE A 242 LYS A 247 0 SHEET 2 AA1 5 VAL A 256 TRP A 261 -1 O VAL A 260 N THR A 243 SHEET 3 AA1 5 LEU A 266 LYS A 271 -1 O VAL A 268 N GLY A 259 SHEET 4 AA1 5 TYR A 312 GLU A 316 -1 O THR A 315 N ALA A 269 SHEET 5 AA1 5 LEU A 301 CYS A 305 -1 N LEU A 302 O ILE A 314 SHEET 1 AA2 2 CYS A 369 VAL A 371 0 SHEET 2 AA2 2 VAL A 377 VAL A 379 -1 O LYS A 378 N LEU A 370 CISPEP 1 PRO A 309 PRO A 310 0 -3.90 SITE 1 AC1 21 VAL A 270 LYS A 271 GLU A 286 MET A 290 SITE 2 AC1 21 ILE A 293 LEU A 298 VAL A 299 ILE A 313 SITE 3 AC1 21 THR A 315 GLU A 316 PHE A 317 MET A 318 SITE 4 AC1 21 GLY A 321 ILE A 360 HIS A 361 LEU A 370 SITE 5 AC1 21 VAL A 379 ALA A 380 ASP A 381 PHE A 382 SITE 6 AC1 21 HOH A 868 SITE 1 AC2 13 MET A 226 PRO A 309 PHE A 311 ARG A 386 SITE 2 AC2 13 LEU A 387 MET A 388 ILE A 403 ALA A 412 SITE 3 AC2 13 TYR A 449 GLU A 453 HOH A 758 HOH A 760 SITE 4 AC2 13 HOH A 776 SITE 1 AC3 5 TYR A 253 ASN A 322 ARG A 367 HIS A 396 SITE 2 AC3 5 HOH A 857 SITE 1 AC4 5 GLU A 238 ARG A 457 ARG A 473 TRP A 476 SITE 2 AC4 5 GLN A 477 SITE 1 AC5 3 MET A 244 TYR A 257 TYR A 312 SITE 1 AC6 7 LYS A 234 TRP A 235 MET A 237 TRP A 261 SITE 2 AC6 7 LEU A 302 HOH A 739 HOH A 784 SITE 1 AC7 4 ALA A 337 TYR A 435 HOH A 711 HOH A 728 SITE 1 AC8 5 ASN A 336 GLU A 494 HOH A 705 HOH A 710 SITE 2 AC8 5 HOH A 736 SITE 1 AC9 1 ALA A 492 SITE 1 AD1 4 ILE A 360 PHE A 416 SER A 417 HOH A 805 SITE 1 AD2 6 TYR A 326 GLU A 329 CYS A 330 EDO A 612 SITE 2 AD2 6 HOH A 791 HOH A 895 SITE 1 AD3 6 TYR A 320 TYR A 326 GLU A 334 ASN A 374 SITE 2 AD3 6 EDO A 611 HOH A 815 SITE 1 AD4 3 GLN A 498 HOH A 786 HOH A 836 SITE 1 AD5 1 HOH A 702 SITE 1 AD6 3 LYS A 274 GLU A 275 ASP A 276 CRYST1 37.852 108.435 146.295 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026419 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009222 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006836 0.00000