HEADER TRANSFERASE 28-JAN-16 5HVC TITLE SOLUTION STRUCTURE OF THE APO STATE OF THE ACYL CARRIER PROTEIN FROM TITLE 2 THE MLSA2 SUBUNIT OF THE MYCOLACTONE POLYKETIDE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE I MODULAR POLYKETIDE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ACYL CARRIER PROTEIN FRAGMENT, UNP RESIDUES 2050 TO 2140; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM ULCERANS; SOURCE 3 ORGANISM_TAXID: 1809; SOURCE 4 GENE: MLSA2, MUP039C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: TUNER; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS ACYL CARRIER PROTEIN MYCOLACTONE, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.VANCE,O.TKACHENKO,B.THOMAS,M.BASSUNI,H.HONG,D.NIETLISPACH, AUTHOR 2 R.W.BROADHURST REVDAT 5 14-JUN-23 5HVC 1 REMARK REVDAT 4 08-MAY-19 5HVC 1 REMARK REVDAT 3 20-APR-16 5HVC 1 JRNL REVDAT 2 30-MAR-16 5HVC 1 JRNL REVDAT 1 09-MAR-16 5HVC 0 JRNL AUTH S.VANCE,O.TKACHENKO,B.THOMAS,M.BASSUNI,H.HONG,D.NIETLISPACH, JRNL AUTH 2 W.BROADHURST JRNL TITL STICKY SWINGING ARM DYNAMICS: STUDIES OF AN ACYL CARRIER JRNL TITL 2 PROTEIN DOMAIN FROM THE MYCOLACTONE POLYKETIDE SYNTHASE. JRNL REF BIOCHEM.J. V. 473 1097 2016 JRNL REFN ESSN 1470-8728 JRNL PMID 26920023 JRNL DOI 10.1042/BCJ20160041 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 2839 REMARK 3 DISTANCE RESTRAINTS, NO HYDROGEN BOND RESTRAINTS, AND 167 REMARK 3 BACKBONE DIHEDRAL ANGLE RESTRAINTS DEFINED USING THE DANGLE REMARK 3 ALGORITHM IN CCPN ANALYSIS REMARK 4 REMARK 4 5HVC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217821. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 150 MM SODIUM PHOSPHATE, 0.1 MM REMARK 210 333-TRIMETHYLSILYLPROPIONATE, REMARK 210 SODIUM SALT, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 15N-TOCSY REMARK 210 -HSQC; 3D 15N-NOESY-HSQC; 3D REMARK 210 HNCA; 3D HNCACB; 3D HN(CO)CA; 3D REMARK 210 CBCA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 13C-NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A2049 37.95 -81.78 REMARK 500 1 ARG A2050 10.47 -39.44 REMARK 500 1 LEU A2051 14.09 -37.90 REMARK 500 1 HIS A2078 -31.71 70.86 REMARK 500 1 THR A2124 155.54 167.20 REMARK 500 2 SER A2047 -62.21 69.38 REMARK 500 2 MET A2049 37.35 -85.59 REMARK 500 2 ARG A2050 9.95 -35.87 REMARK 500 2 LEU A2051 41.73 -39.92 REMARK 500 2 HIS A2078 -23.60 69.97 REMARK 500 2 THR A2124 155.35 167.04 REMARK 500 3 HIS A2048 -126.01 56.08 REMARK 500 3 ARG A2050 3.75 -38.14 REMARK 500 3 LEU A2051 -17.62 -39.98 REMARK 500 3 ASN A2052 151.00 -48.71 REMARK 500 3 HIS A2078 -178.74 66.07 REMARK 500 3 THR A2079 115.33 54.09 REMARK 500 3 THR A2124 158.57 166.82 REMARK 500 4 MET A2049 35.24 -82.47 REMARK 500 4 ARG A2050 6.21 -47.33 REMARK 500 4 LEU A2051 44.68 -27.70 REMARK 500 4 HIS A2078 -54.10 67.66 REMARK 500 4 THR A2124 155.45 167.86 REMARK 500 4 SER A2139 74.21 -151.58 REMARK 500 5 MET A2049 40.25 -79.54 REMARK 500 5 ARG A2050 5.60 -31.94 REMARK 500 5 LEU A2051 39.19 -51.91 REMARK 500 5 HIS A2078 161.33 65.37 REMARK 500 5 THR A2079 138.68 43.60 REMARK 500 5 LEU A2112 -160.38 -101.48 REMARK 500 5 THR A2124 155.96 167.60 REMARK 500 6 MET A2049 -78.75 -28.87 REMARK 500 6 HIS A2078 159.36 69.57 REMARK 500 6 THR A2079 141.25 46.59 REMARK 500 6 LEU A2112 -158.27 -99.80 REMARK 500 6 THR A2124 154.59 168.33 REMARK 500 7 MET A2049 30.03 -85.10 REMARK 500 7 ARG A2050 6.03 -59.35 REMARK 500 7 LEU A2051 45.39 -26.78 REMARK 500 7 LEU A2112 -159.22 -95.26 REMARK 500 7 THR A2124 157.57 167.21 REMARK 500 8 SER A2047 45.99 -168.48 REMARK 500 8 MET A2049 34.69 -91.65 REMARK 500 8 ARG A2050 4.96 -46.53 REMARK 500 8 LEU A2051 46.72 -24.36 REMARK 500 8 HIS A2078 -38.48 67.50 REMARK 500 8 LEU A2112 -159.68 -97.31 REMARK 500 8 THR A2124 158.31 167.78 REMARK 500 9 MET A2049 37.57 -78.91 REMARK 500 9 ARG A2050 8.29 -38.83 REMARK 500 REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HV8 RELATED DB: PDB REMARK 900 STRUCTURE OF THE OCTANOYL-LOADED FORM OF THE SAME ACYL CARRIER REMARK 900 PROTEIN DOMAIN REMARK 900 RELATED ID: 30006 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFTS OF THE OCTANOYL-LOADED FORM OF THE SAME ACYL REMARK 900 CARRIER PROTEIN DOMAIN REMARK 900 RELATED ID: 30007 RELATED DB: BMRB DBREF 5HVC A 2050 2140 UNP Q6MZA5 Q6MZA5_MYCUA 2050 2140 SEQADV 5HVC GLY A 2046 UNP Q6MZA5 EXPRESSION TAG SEQADV 5HVC SER A 2047 UNP Q6MZA5 EXPRESSION TAG SEQADV 5HVC HIS A 2048 UNP Q6MZA5 EXPRESSION TAG SEQADV 5HVC MET A 2049 UNP Q6MZA5 EXPRESSION TAG SEQRES 1 A 95 GLY SER HIS MET ARG LEU ASN GLY LEU SER PRO GLN GLN SEQRES 2 A 95 GLN GLN GLN THR LEU ALA THR LEU VAL ALA ALA ALA THR SEQRES 3 A 95 ALA THR VAL LEU GLY HIS HIS THR PRO GLU SER ILE SER SEQRES 4 A 95 PRO ALA THR ALA PHE LYS ASP LEU GLY ILE ASP SER LEU SEQRES 5 A 95 THR ALA LEU GLU LEU ARG ASN THR LEU THR HIS ASN THR SEQRES 6 A 95 GLY LEU ASP LEU PRO PRO THR LEU ILE PHE ASP HIS PRO SEQRES 7 A 95 THR PRO HIS ALA LEU THR GLN HIS LEU HIS THR ARG LEU SEQRES 8 A 95 THR GLN SER HIS HELIX 1 AA1 SER A 2055 GLY A 2076 1 22 HELIX 2 AA2 ALA A 2088 GLY A 2093 1 6 HELIX 3 AA3 ASP A 2095 GLY A 2111 1 17 HELIX 4 AA4 THR A 2117 HIS A 2122 1 6 HELIX 5 AA5 THR A 2124 GLN A 2138 1 15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.001000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.001000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001000 0.00000 MODEL 1