HEADER TRANSFERASE 28-JAN-16 5HVJ TITLE CRYSTAL STRUCTURE OF LIMK1 D460N MUTANT IN COMPLEX WITH AMP-PNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIM DOMAIN KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIMK-1; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIMK1, LIMK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PFASTBAC HTB KEYWDS KINASE ATP ANALOG ACTIN-REMODELING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.HAMILL,T.J.BOGGON REVDAT 5 27-SEP-23 5HVJ 1 REMARK REVDAT 4 25-DEC-19 5HVJ 1 REMARK REVDAT 3 13-SEP-17 5HVJ 1 JRNL REMARK REVDAT 2 18-MAY-16 5HVJ 1 JRNL REVDAT 1 04-MAY-16 5HVJ 0 JRNL AUTH S.HAMILL,H.J.LOU,B.E.TURK,T.J.BOGGON JRNL TITL STRUCTURAL BASIS FOR NONCANONICAL SUBSTRATE RECOGNITION OF JRNL TITL 2 COFILIN/ADF PROTEINS BY LIM KINASES. JRNL REF MOL.CELL V. 62 397 2016 JRNL REFN ISSN 1097-2765 JRNL PMID 27153537 JRNL DOI 10.1016/J.MOLCEL.2016.04.001 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1819 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9853 - 5.0338 1.00 2600 137 0.1769 0.2015 REMARK 3 2 5.0338 - 3.9967 1.00 2564 127 0.1590 0.2169 REMARK 3 3 3.9967 - 3.4918 1.00 2521 140 0.1823 0.2124 REMARK 3 4 3.4918 - 3.1727 1.00 2544 126 0.2034 0.2554 REMARK 3 5 3.1727 - 2.9453 1.00 2521 138 0.2227 0.2563 REMARK 3 6 2.9453 - 2.7717 1.00 2512 131 0.2417 0.2917 REMARK 3 7 2.7717 - 2.6330 1.00 2526 113 0.2451 0.3457 REMARK 3 8 2.6330 - 2.5184 1.00 2500 151 0.2538 0.3031 REMARK 3 9 2.5184 - 2.4214 1.00 2501 136 0.2862 0.3718 REMARK 3 10 2.4214 - 2.3379 1.00 2481 145 0.2931 0.3606 REMARK 3 11 2.3379 - 2.2648 1.00 2535 124 0.3219 0.3586 REMARK 3 12 2.2648 - 2.2001 0.98 2397 145 0.3771 0.4401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4772 REMARK 3 ANGLE : 0.641 6450 REMARK 3 CHIRALITY : 0.027 688 REMARK 3 PLANARITY : 0.003 831 REMARK 3 DIHEDRAL : 12.905 1818 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 329 THROUGH 374 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3249 3.5468 -7.8488 REMARK 3 T TENSOR REMARK 3 T11: 0.5900 T22: 0.5172 REMARK 3 T33: 0.7555 T12: 0.0351 REMARK 3 T13: -0.2019 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 8.7573 L22: 7.3386 REMARK 3 L33: 9.2455 L12: 1.7560 REMARK 3 L13: -2.5659 L23: -1.0417 REMARK 3 S TENSOR REMARK 3 S11: -0.1753 S12: -0.6475 S13: -0.1037 REMARK 3 S21: 0.6611 S22: 0.1373 S23: -0.3669 REMARK 3 S31: -0.3130 S32: 0.3262 S33: 0.1307 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 375 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9948 2.4349 2.9264 REMARK 3 T TENSOR REMARK 3 T11: 0.6657 T22: 0.8160 REMARK 3 T33: 0.7947 T12: 0.0944 REMARK 3 T13: -0.0035 T23: 0.1796 REMARK 3 L TENSOR REMARK 3 L11: 8.6240 L22: 2.0332 REMARK 3 L33: 8.3048 L12: 1.5845 REMARK 3 L13: 3.9634 L23: 0.6045 REMARK 3 S TENSOR REMARK 3 S11: -0.1564 S12: -1.3225 S13: -0.3047 REMARK 3 S21: 1.1107 S22: 0.3280 S23: 0.1251 REMARK 3 S31: -0.2819 S32: -0.1818 S33: -0.1960 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 391 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4705 4.7171 -13.3785 REMARK 3 T TENSOR REMARK 3 T11: 0.3670 T22: 0.2596 REMARK 3 T33: 0.5372 T12: -0.0132 REMARK 3 T13: -0.0484 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 5.5747 L22: 2.4284 REMARK 3 L33: 4.7809 L12: -1.3384 REMARK 3 L13: 2.1197 L23: -0.9601 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: 0.0359 S13: -0.1758 REMARK 3 S21: 0.1664 S22: 0.0972 S23: -0.2730 REMARK 3 S31: 0.0639 S32: 0.4317 S33: -0.0308 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 477 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5791 10.0970 1.3184 REMARK 3 T TENSOR REMARK 3 T11: 0.7617 T22: 0.5399 REMARK 3 T33: 0.5293 T12: -0.0314 REMARK 3 T13: -0.1159 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 5.0622 L22: 6.3582 REMARK 3 L33: 6.5249 L12: -3.8824 REMARK 3 L13: 0.7057 L23: 0.1536 REMARK 3 S TENSOR REMARK 3 S11: -0.5113 S12: -0.7883 S13: 0.0777 REMARK 3 S21: 1.1528 S22: 0.0944 S23: -0.3113 REMARK 3 S31: 0.0513 S32: -0.3154 S33: 0.4282 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 528 THROUGH 586 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.9216 16.7224 -13.2525 REMARK 3 T TENSOR REMARK 3 T11: 0.3788 T22: 0.2619 REMARK 3 T33: 0.6233 T12: 0.0041 REMARK 3 T13: -0.1236 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 3.7026 L22: 7.2774 REMARK 3 L33: 8.0751 L12: -0.2698 REMARK 3 L13: 0.1188 L23: -2.3079 REMARK 3 S TENSOR REMARK 3 S11: -0.2569 S12: -0.1982 S13: 0.2340 REMARK 3 S21: 0.0336 S22: -0.0294 S23: 0.3295 REMARK 3 S31: -0.4950 S32: -0.3541 S33: 0.2423 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 587 THROUGH 613 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8037 2.8808 -15.4097 REMARK 3 T TENSOR REMARK 3 T11: 0.3769 T22: 0.2977 REMARK 3 T33: 0.6806 T12: -0.0947 REMARK 3 T13: -0.0975 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 3.2012 L22: 6.1324 REMARK 3 L33: 2.7485 L12: -1.2064 REMARK 3 L13: 0.8141 L23: 3.4985 REMARK 3 S TENSOR REMARK 3 S11: 0.1050 S12: -0.3359 S13: -0.6728 REMARK 3 S21: 0.2779 S22: -0.2079 S23: 0.5886 REMARK 3 S31: 0.7751 S32: -0.1895 S33: 0.3300 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 614 THROUGH 633 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.1120 7.2161 -21.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.4707 T22: 0.3616 REMARK 3 T33: 0.8258 T12: -0.0370 REMARK 3 T13: -0.1683 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.5458 L22: 8.6947 REMARK 3 L33: 9.2754 L12: -1.5850 REMARK 3 L13: -3.7939 L23: 6.4585 REMARK 3 S TENSOR REMARK 3 S11: -0.1506 S12: -0.1030 S13: -0.1533 REMARK 3 S21: -0.3207 S22: -0.1362 S23: 1.0227 REMARK 3 S31: -0.3179 S32: -0.2280 S33: 0.2789 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 330 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8656 -10.6852 -56.8454 REMARK 3 T TENSOR REMARK 3 T11: 1.0497 T22: 1.1824 REMARK 3 T33: 0.8690 T12: 0.3718 REMARK 3 T13: -0.3073 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 5.3283 L22: 4.1092 REMARK 3 L33: 7.5808 L12: -1.3390 REMARK 3 L13: -0.2127 L23: 0.2653 REMARK 3 S TENSOR REMARK 3 S11: 0.5626 S12: 1.3019 S13: -0.1608 REMARK 3 S21: -0.9892 S22: -0.9305 S23: 0.1397 REMARK 3 S31: 0.4553 S32: -0.0838 S33: 0.4149 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 391 THROUGH 569 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.7934 -18.1928 -39.9344 REMARK 3 T TENSOR REMARK 3 T11: 0.7109 T22: 0.4144 REMARK 3 T33: 0.6356 T12: -0.0466 REMARK 3 T13: -0.2284 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 4.6348 L22: 3.6150 REMARK 3 L33: 3.2216 L12: -1.4241 REMARK 3 L13: 1.1624 L23: -0.4566 REMARK 3 S TENSOR REMARK 3 S11: 0.4550 S12: 0.4096 S13: -0.1034 REMARK 3 S21: -0.6931 S22: -0.2655 S23: 0.4667 REMARK 3 S31: 0.4549 S32: -0.2711 S33: -0.1965 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 570 THROUGH 637 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8752 -17.9072 -25.0788 REMARK 3 T TENSOR REMARK 3 T11: 0.5630 T22: 0.3167 REMARK 3 T33: 0.6498 T12: -0.0516 REMARK 3 T13: -0.1234 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 2.2349 L22: 5.8099 REMARK 3 L33: 2.3905 L12: -1.9249 REMARK 3 L13: 0.9866 L23: -1.3696 REMARK 3 S TENSOR REMARK 3 S11: 0.0660 S12: -0.0125 S13: 0.1941 REMARK 3 S21: 0.2480 S22: -0.0743 S23: -0.6774 REMARK 3 S31: -0.0135 S32: 0.0813 S33: 0.0309 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000214966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31929 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 39.979 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3S95 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-24% PEG 3350, 0.2 M POTASSIUM REMARK 280 CITRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.78650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 324 REMARK 465 ALA A 325 REMARK 465 MET A 326 REMARK 465 GLY A 327 REMARK 465 SER A 328 REMARK 465 VAL A 486 REMARK 465 ASP A 487 REMARK 465 GLU A 488 REMARK 465 LYS A 489 REMARK 465 THR A 490 REMARK 465 GLN A 491 REMARK 465 PRO A 492 REMARK 465 GLU A 493 REMARK 465 GLY A 494 REMARK 465 LEU A 495 REMARK 465 ARG A 496 REMARK 465 SER A 497 REMARK 465 LEU A 498 REMARK 465 LYS A 499 REMARK 465 LYS A 500 REMARK 465 PRO A 501 REMARK 465 ASP A 502 REMARK 465 ARG A 503 REMARK 465 LYS A 504 REMARK 465 LYS A 505 REMARK 465 ARG A 506 REMARK 465 TYR A 507 REMARK 465 ARG A 634 REMARK 465 GLY A 635 REMARK 465 GLU A 636 REMARK 465 SER A 637 REMARK 465 GLY A 638 REMARK 465 GLY B 324 REMARK 465 ALA B 325 REMARK 465 MET B 326 REMARK 465 GLY B 327 REMARK 465 SER B 328 REMARK 465 ARG B 329 REMARK 465 MET B 485 REMARK 465 VAL B 486 REMARK 465 ASP B 487 REMARK 465 GLU B 488 REMARK 465 LYS B 489 REMARK 465 THR B 490 REMARK 465 GLN B 491 REMARK 465 PRO B 492 REMARK 465 GLU B 493 REMARK 465 GLY B 494 REMARK 465 LEU B 495 REMARK 465 ARG B 496 REMARK 465 SER B 497 REMARK 465 LEU B 498 REMARK 465 LYS B 499 REMARK 465 LYS B 500 REMARK 465 PRO B 501 REMARK 465 ASP B 502 REMARK 465 ARG B 503 REMARK 465 LYS B 504 REMARK 465 LYS B 505 REMARK 465 ARG B 506 REMARK 465 TYR B 507 REMARK 465 THR B 508 REMARK 465 GLY B 638 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 512 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1138 O HOH A 1139 2.02 REMARK 500 O THR A 420 O HOH A 1101 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 371 -63.50 -90.93 REMARK 500 ASP A 406 -171.03 65.45 REMARK 500 ASN A 460 40.67 -149.32 REMARK 500 ASP A 478 87.07 60.53 REMARK 500 ASP A 527 -154.91 -126.15 REMARK 500 TYR A 552 -78.36 -122.00 REMARK 500 SER A 578 -20.32 76.94 REMARK 500 ARG B 372 -161.37 54.73 REMARK 500 ASP B 374 144.69 -173.13 REMARK 500 ASN B 460 45.14 -154.41 REMARK 500 ASP B 478 85.14 58.14 REMARK 500 ASP B 527 -156.25 -136.06 REMARK 500 TYR B 552 -53.57 -126.80 REMARK 500 SER B 578 -20.23 74.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ANP A 1000 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HVK RELATED DB: PDB DBREF 5HVJ A 329 638 UNP P53667 LIMK1_HUMAN 329 638 DBREF 5HVJ B 329 638 UNP P53667 LIMK1_HUMAN 329 638 SEQADV 5HVJ GLY A 324 UNP P53667 EXPRESSION TAG SEQADV 5HVJ ALA A 325 UNP P53667 EXPRESSION TAG SEQADV 5HVJ MET A 326 UNP P53667 EXPRESSION TAG SEQADV 5HVJ GLY A 327 UNP P53667 EXPRESSION TAG SEQADV 5HVJ SER A 328 UNP P53667 EXPRESSION TAG SEQADV 5HVJ ASN A 460 UNP P53667 ASP 460 ENGINEERED MUTATION SEQADV 5HVJ GLY B 324 UNP P53667 EXPRESSION TAG SEQADV 5HVJ ALA B 325 UNP P53667 EXPRESSION TAG SEQADV 5HVJ MET B 326 UNP P53667 EXPRESSION TAG SEQADV 5HVJ GLY B 327 UNP P53667 EXPRESSION TAG SEQADV 5HVJ SER B 328 UNP P53667 EXPRESSION TAG SEQADV 5HVJ ASN B 460 UNP P53667 ASP 460 ENGINEERED MUTATION SEQRES 1 A 315 GLY ALA MET GLY SER ARG PRO HIS ARG ILE PHE ARG PRO SEQRES 2 A 315 SER ASP LEU ILE HIS GLY GLU VAL LEU GLY LYS GLY CYS SEQRES 3 A 315 PHE GLY GLN ALA ILE LYS VAL THR HIS ARG GLU THR GLY SEQRES 4 A 315 GLU VAL MET VAL MET LYS GLU LEU ILE ARG PHE ASP GLU SEQRES 5 A 315 GLU THR GLN ARG THR PHE LEU LYS GLU VAL LYS VAL MET SEQRES 6 A 315 ARG CYS LEU GLU HIS PRO ASN VAL LEU LYS PHE ILE GLY SEQRES 7 A 315 VAL LEU TYR LYS ASP LYS ARG LEU ASN PHE ILE THR GLU SEQRES 8 A 315 TYR ILE LYS GLY GLY THR LEU ARG GLY ILE ILE LYS SER SEQRES 9 A 315 MET ASP SER GLN TYR PRO TRP SER GLN ARG VAL SER PHE SEQRES 10 A 315 ALA LYS ASP ILE ALA SER GLY MET ALA TYR LEU HIS SER SEQRES 11 A 315 MET ASN ILE ILE HIS ARG ASN LEU ASN SER HIS ASN CYS SEQRES 12 A 315 LEU VAL ARG GLU ASN LYS ASN VAL VAL VAL ALA ASP PHE SEQRES 13 A 315 GLY LEU ALA ARG LEU MET VAL ASP GLU LYS THR GLN PRO SEQRES 14 A 315 GLU GLY LEU ARG SER LEU LYS LYS PRO ASP ARG LYS LYS SEQRES 15 A 315 ARG TYR THR VAL VAL GLY ASN PRO TYR TRP MET ALA PRO SEQRES 16 A 315 GLU MET ILE ASN GLY ARG SER TYR ASP GLU LYS VAL ASP SEQRES 17 A 315 VAL PHE SER PHE GLY ILE VAL LEU CYS GLU ILE ILE GLY SEQRES 18 A 315 ARG VAL ASN ALA ASP PRO ASP TYR LEU PRO ARG THR MET SEQRES 19 A 315 ASP PHE GLY LEU ASN VAL ARG GLY PHE LEU ASP ARG TYR SEQRES 20 A 315 CYS PRO PRO ASN CYS PRO PRO SER PHE PHE PRO ILE THR SEQRES 21 A 315 VAL ARG CYS CYS ASP LEU ASP PRO GLU LYS ARG PRO SER SEQRES 22 A 315 PHE VAL LYS LEU GLU HIS TRP LEU GLU THR LEU ARG MET SEQRES 23 A 315 HIS LEU ALA GLY HIS LEU PRO LEU GLY PRO GLN LEU GLU SEQRES 24 A 315 GLN LEU ASP ARG GLY PHE TRP GLU THR TYR ARG ARG GLY SEQRES 25 A 315 GLU SER GLY SEQRES 1 B 315 GLY ALA MET GLY SER ARG PRO HIS ARG ILE PHE ARG PRO SEQRES 2 B 315 SER ASP LEU ILE HIS GLY GLU VAL LEU GLY LYS GLY CYS SEQRES 3 B 315 PHE GLY GLN ALA ILE LYS VAL THR HIS ARG GLU THR GLY SEQRES 4 B 315 GLU VAL MET VAL MET LYS GLU LEU ILE ARG PHE ASP GLU SEQRES 5 B 315 GLU THR GLN ARG THR PHE LEU LYS GLU VAL LYS VAL MET SEQRES 6 B 315 ARG CYS LEU GLU HIS PRO ASN VAL LEU LYS PHE ILE GLY SEQRES 7 B 315 VAL LEU TYR LYS ASP LYS ARG LEU ASN PHE ILE THR GLU SEQRES 8 B 315 TYR ILE LYS GLY GLY THR LEU ARG GLY ILE ILE LYS SER SEQRES 9 B 315 MET ASP SER GLN TYR PRO TRP SER GLN ARG VAL SER PHE SEQRES 10 B 315 ALA LYS ASP ILE ALA SER GLY MET ALA TYR LEU HIS SER SEQRES 11 B 315 MET ASN ILE ILE HIS ARG ASN LEU ASN SER HIS ASN CYS SEQRES 12 B 315 LEU VAL ARG GLU ASN LYS ASN VAL VAL VAL ALA ASP PHE SEQRES 13 B 315 GLY LEU ALA ARG LEU MET VAL ASP GLU LYS THR GLN PRO SEQRES 14 B 315 GLU GLY LEU ARG SER LEU LYS LYS PRO ASP ARG LYS LYS SEQRES 15 B 315 ARG TYR THR VAL VAL GLY ASN PRO TYR TRP MET ALA PRO SEQRES 16 B 315 GLU MET ILE ASN GLY ARG SER TYR ASP GLU LYS VAL ASP SEQRES 17 B 315 VAL PHE SER PHE GLY ILE VAL LEU CYS GLU ILE ILE GLY SEQRES 18 B 315 ARG VAL ASN ALA ASP PRO ASP TYR LEU PRO ARG THR MET SEQRES 19 B 315 ASP PHE GLY LEU ASN VAL ARG GLY PHE LEU ASP ARG TYR SEQRES 20 B 315 CYS PRO PRO ASN CYS PRO PRO SER PHE PHE PRO ILE THR SEQRES 21 B 315 VAL ARG CYS CYS ASP LEU ASP PRO GLU LYS ARG PRO SER SEQRES 22 B 315 PHE VAL LYS LEU GLU HIS TRP LEU GLU THR LEU ARG MET SEQRES 23 B 315 HIS LEU ALA GLY HIS LEU PRO LEU GLY PRO GLN LEU GLU SEQRES 24 B 315 GLN LEU ASP ARG GLY PHE TRP GLU THR TYR ARG ARG GLY SEQRES 25 B 315 GLU SER GLY HET ANP A1000 19 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 HOH *70(H2 O) HELIX 1 AA1 ARG A 335 SER A 337 5 3 HELIX 2 AA2 ASP A 374 ARG A 389 1 16 HELIX 3 AA3 THR A 420 SER A 427 1 8 HELIX 4 AA4 PRO A 433 MET A 454 1 22 HELIX 5 AA5 ASN A 512 MET A 516 5 5 HELIX 6 AA6 ALA A 517 ASN A 522 1 6 HELIX 7 AA7 GLU A 528 ARG A 545 1 18 HELIX 8 AA8 ASN A 562 TYR A 570 1 9 HELIX 9 AA9 SER A 578 CYS A 587 1 10 HELIX 10 AB1 SER A 596 HIS A 614 1 19 HELIX 11 AB2 GLY A 618 TYR A 632 1 15 HELIX 12 AB3 ASP B 374 ARG B 389 1 16 HELIX 13 AB4 THR B 420 SER B 427 1 8 HELIX 14 AB5 PRO B 433 MET B 454 1 22 HELIX 15 AB6 ALA B 517 ASN B 522 1 6 HELIX 16 AB7 LYS B 529 ARG B 545 1 17 HELIX 17 AB8 ASN B 562 TYR B 570 1 9 HELIX 18 AB9 SER B 578 CYS B 587 1 10 HELIX 19 AC1 SER B 596 ALA B 612 1 17 HELIX 20 AC2 GLY B 618 ARG B 633 1 16 SHEET 1 AA1 6 ARG A 332 PHE A 334 0 SHEET 2 AA1 6 PHE A 399 LEU A 403 1 O VAL A 402 N PHE A 334 SHEET 3 AA1 6 ASN A 410 GLU A 414 -1 O ILE A 412 N GLY A 401 SHEET 4 AA1 6 VAL A 364 GLU A 369 -1 N LYS A 368 O PHE A 411 SHEET 5 AA1 6 GLN A 352 HIS A 358 -1 N VAL A 356 O MET A 365 SHEET 6 AA1 6 LEU A 339 LYS A 347 -1 N GLY A 346 O ALA A 353 SHEET 1 AA2 2 ILE A 456 ILE A 457 0 SHEET 2 AA2 2 ARG A 483 LEU A 484 -1 O ARG A 483 N ILE A 457 SHEET 1 AA3 2 CYS A 466 VAL A 468 0 SHEET 2 AA3 2 VAL A 474 VAL A 476 -1 O VAL A 475 N LEU A 467 SHEET 1 AA4 5 LEU B 339 VAL B 344 0 SHEET 2 AA4 5 GLN B 352 HIS B 358 -1 O LYS B 355 N GLY B 342 SHEET 3 AA4 5 VAL B 364 GLU B 369 -1 O MET B 367 N ILE B 354 SHEET 4 AA4 5 ASN B 410 GLU B 414 -1 O THR B 413 N VAL B 366 SHEET 5 AA4 5 PHE B 399 GLY B 401 -1 N GLY B 401 O ILE B 412 SHEET 1 AA5 2 CYS B 466 VAL B 468 0 SHEET 2 AA5 2 VAL B 474 VAL B 476 -1 O VAL B 475 N LEU B 467 CISPEP 1 ASP A 406 LYS A 407 0 8.23 CISPEP 2 CYS B 349 PHE B 350 0 -1.76 CISPEP 3 LYS B 407 ARG B 408 0 1.37 SITE 1 AC1 4 GLU A 414 ILE A 416 THR A 420 LEU A 467 CRYST1 54.987 59.573 98.276 90.00 101.28 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018186 0.000000 0.003627 0.00000 SCALE2 0.000000 0.016786 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010376 0.00000