HEADER TRANSFERASE 28-JAN-16 5HVO TITLE STRUCTURE OF ASPERGILLUS FUMIGATUS TREHALOSE-6-PHOSPHATE SYNTHASE B IN TITLE 2 COMPLEX WITH UDP AND VALIDOXYLAMINE A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING); COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TREHALOSE-6-PHOSPHATE SYNTHASE; COMPND 5 EC: 2.4.1.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA (STRAIN ATCC MYA-4609 / SOURCE 3 AF293 / CBS 101355 / FGSC A1100); SOURCE 4 ORGANISM_TAXID: 330879; SOURCE 5 STRAIN: ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100; SOURCE 6 GENE: AFUA_2G04010; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TREHALOSE-6-PHOSPHATE SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.MIAO,R.G.BRENNAN REVDAT 5 06-MAR-24 5HVO 1 REMARK REVDAT 4 11-DEC-19 5HVO 1 REMARK REVDAT 3 27-SEP-17 5HVO 1 JRNL REVDAT 2 20-SEP-17 5HVO 1 REMARK REVDAT 1 03-MAY-17 5HVO 0 JRNL AUTH Y.MIAO,J.L.TENOR,D.L.TOFFALETTI,S.A.MASKARINEC,J.LIU, JRNL AUTH 2 R.E.LEE,J.R.PERFECT,R.G.BRENNAN JRNL TITL STRUCTURAL AND IN VIVO STUDIES ON TREHALOSE-6-PHOSPHATE JRNL TITL 2 SYNTHASE FROM PATHOGENIC FUNGI PROVIDE INSIGHTS INTO ITS JRNL TITL 3 CATALYTIC MECHANISM, BIOLOGICAL NECESSITY, AND POTENTIAL FOR JRNL TITL 4 NOVEL ANTIFUNGAL DRUG DESIGN. JRNL REF MBIO V. 8 2017 JRNL REFN ESSN 2150-7511 JRNL PMID 28743811 JRNL DOI 10.1128/MBIO.00643-17 REMARK 2 REMARK 2 RESOLUTION. 2.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 74685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.680 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8330 - 5.9389 0.94 5379 148 0.1840 0.2326 REMARK 3 2 5.9389 - 4.7163 0.96 5307 146 0.1920 0.2140 REMARK 3 3 4.7163 - 4.1209 0.97 5260 144 0.1747 0.1996 REMARK 3 4 4.1209 - 3.7444 0.97 5260 145 0.1849 0.2118 REMARK 3 5 3.7444 - 3.4762 0.98 5261 145 0.1931 0.2419 REMARK 3 6 3.4762 - 3.2713 0.98 5237 143 0.2086 0.2379 REMARK 3 7 3.2713 - 3.1076 0.98 5274 145 0.2172 0.2041 REMARK 3 8 3.1076 - 2.9723 0.98 5238 145 0.2216 0.2871 REMARK 3 9 2.9723 - 2.8579 0.98 5268 145 0.2313 0.2781 REMARK 3 10 2.8579 - 2.7594 0.99 5222 144 0.2331 0.2885 REMARK 3 11 2.7594 - 2.6731 0.99 5280 144 0.2293 0.3309 REMARK 3 12 2.6731 - 2.5967 0.99 5279 146 0.2287 0.2814 REMARK 3 13 2.5967 - 2.5283 0.99 5249 144 0.2335 0.2633 REMARK 3 14 2.5283 - 2.4667 0.78 4172 115 0.2632 0.3463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 15142 REMARK 3 ANGLE : 1.205 20529 REMARK 3 CHIRALITY : 0.050 2267 REMARK 3 PLANARITY : 0.007 2582 REMARK 3 DIHEDRAL : 14.327 5501 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HVO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217784. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74743 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.460 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.68200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS, 20% REMARK 280 PEG 3350, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.29050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.40650 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.29050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.40650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 130.58100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 130.58100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -184.81300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 GLY A 9 REMARK 465 ASP A 10 REMARK 465 HIS A 11 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 SER A 38 REMARK 465 GLY A 39 REMARK 465 GLY A 40 REMARK 465 LEU A 41 REMARK 465 VAL A 42 REMARK 465 THR A 43 REMARK 465 SER A 479 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 ASN B 5 REMARK 465 GLY B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 GLY B 9 REMARK 465 ASP B 10 REMARK 465 HIS B 11 REMARK 465 ARG B 26 REMARK 465 SER B 27 REMARK 465 GLU B 28 REMARK 465 GLY B 29 REMARK 465 GLY B 30 REMARK 465 LYS B 31 REMARK 465 SER B 38 REMARK 465 GLY B 39 REMARK 465 GLY B 40 REMARK 465 LEU B 41 REMARK 465 VAL B 42 REMARK 465 THR B 43 REMARK 465 SER B 478 REMARK 465 SER B 479 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 3 REMARK 465 THR C 4 REMARK 465 ASN C 5 REMARK 465 GLY C 6 REMARK 465 SER C 7 REMARK 465 GLU C 8 REMARK 465 GLY C 9 REMARK 465 ASP C 10 REMARK 465 ARG C 25 REMARK 465 ARG C 26 REMARK 465 SER C 27 REMARK 465 GLU C 28 REMARK 465 GLY C 29 REMARK 465 GLY C 30 REMARK 465 LYS C 31 REMARK 465 SER C 37 REMARK 465 SER C 38 REMARK 465 GLY C 39 REMARK 465 GLY C 40 REMARK 465 LEU C 41 REMARK 465 VAL C 42 REMARK 465 THR C 43 REMARK 465 SER C 479 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 SER D 3 REMARK 465 THR D 4 REMARK 465 ASN D 5 REMARK 465 GLY D 6 REMARK 465 SER D 7 REMARK 465 GLU D 8 REMARK 465 GLY D 9 REMARK 465 ASP D 10 REMARK 465 ARG D 26 REMARK 465 SER D 27 REMARK 465 GLU D 28 REMARK 465 GLY D 29 REMARK 465 GLY D 30 REMARK 465 LYS D 31 REMARK 465 SER D 38 REMARK 465 GLY D 39 REMARK 465 GLY D 40 REMARK 465 LEU D 41 REMARK 465 VAL D 42 REMARK 465 THR D 43 REMARK 465 SER D 479 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1B UDP A 501 H1' VDM A 502 1.55 REMARK 500 NE2 GLN D 476 O HOH D 601 1.86 REMARK 500 OE2 GLU B 33 O HOH B 601 1.87 REMARK 500 OE2 GLU A 186 O HOH A 601 1.90 REMARK 500 OE1 GLU D 158 O HOH D 602 2.02 REMARK 500 OE1 GLN B 446 O HOH B 602 2.05 REMARK 500 O HOH B 610 O HOH B 643 2.06 REMARK 500 O HOH B 639 O HOH B 645 2.07 REMARK 500 NZ LYS A 450 O HOH A 602 2.12 REMARK 500 O LEU D 178 O HOH D 603 2.13 REMARK 500 OE2 GLU B 186 O HOH B 603 2.14 REMARK 500 OE2 GLU C 310 O HOH C 601 2.14 REMARK 500 OD1 ASP D 286 O HOH D 604 2.15 REMARK 500 ND2 ASN D 307 O HOH D 605 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 112 C - N - CA ANGL. DEV. = -11.1 DEGREES REMARK 500 PRO B 112 C - N - CA ANGL. DEV. = -10.4 DEGREES REMARK 500 PRO D 232 C - N - CA ANGL. DEV. = -9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 21 43.49 -76.03 REMARK 500 GLU A 114 101.41 96.92 REMARK 500 ASP A 150 170.27 80.61 REMARK 500 ALA A 166 -2.39 70.54 REMARK 500 SER A 233 13.23 48.20 REMARK 500 MET A 388 -64.91 -133.73 REMARK 500 ASN A 389 104.18 85.38 REMARK 500 GLN A 476 2.44 -68.55 REMARK 500 PRO B 21 45.98 -76.80 REMARK 500 GLU B 114 109.25 119.23 REMARK 500 ASP B 150 171.66 79.45 REMARK 500 ALA B 166 -1.93 72.00 REMARK 500 MET B 388 -64.20 -130.15 REMARK 500 ASN B 389 100.07 88.79 REMARK 500 GLN B 476 2.12 -69.27 REMARK 500 PRO C 21 43.98 -75.75 REMARK 500 GLU C 114 129.20 99.98 REMARK 500 ASP C 150 170.83 79.15 REMARK 500 SER C 233 21.44 -151.64 REMARK 500 MET C 388 -64.51 -131.42 REMARK 500 ASN C 389 102.38 89.86 REMARK 500 GLN C 476 2.78 -64.71 REMARK 500 PRO D 21 45.14 -75.74 REMARK 500 GLU D 114 112.85 122.64 REMARK 500 ASP D 150 170.82 79.55 REMARK 500 ALA D 166 -3.05 69.87 REMARK 500 SER D 233 13.70 53.69 REMARK 500 MET D 388 -64.41 -130.93 REMARK 500 ASN D 389 100.75 89.11 REMARK 500 GLN D 476 2.25 -66.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 654 DISTANCE = 7.05 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VDM A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VDM B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VDM C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VDM D 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HUS RELATED DB: PDB REMARK 900 RELATED ID: 5HUT RELATED DB: PDB REMARK 900 RELATED ID: 5HUU RELATED DB: PDB REMARK 900 RELATED ID: 5HUV RELATED DB: PDB REMARK 900 RELATED ID: 5HVM RELATED DB: PDB REMARK 900 RELATED ID: 5HVL RELATED DB: PDB DBREF 5HVO A 1 479 UNP Q4WHW0 Q4WHW0_ASPFU 1 479 DBREF 5HVO B 1 479 UNP Q4WHW0 Q4WHW0_ASPFU 1 479 DBREF 5HVO C 1 479 UNP Q4WHW0 Q4WHW0_ASPFU 1 479 DBREF 5HVO D 1 479 UNP Q4WHW0 Q4WHW0_ASPFU 1 479 SEQRES 1 A 479 MET SER SER THR ASN GLY SER GLU GLY ASP HIS ARG LEU SEQRES 2 A 479 LEU ILE VAL SER ASN ARG LEU PRO ILE THR ILE ARG ARG SEQRES 3 A 479 SER GLU GLY GLY LYS TYR GLU PHE SER MET SER SER GLY SEQRES 4 A 479 GLY LEU VAL THR GLY LEU SER GLY LEU SER LYS THR THR SEQRES 5 A 479 THR PHE GLN TRP TYR GLY TRP PRO GLY LEU GLU VAL PRO SEQRES 6 A 479 GLU ASP GLU LEU GLY SER VAL LYS LYS ARG LEU LYS ASP SEQRES 7 A 479 GLU PHE ASN ALA THR PRO VAL PHE MET ASP ASP LYS LEU SEQRES 8 A 479 ALA ASP ARG HIS TYR ASN GLY PHE SER ASN SER ILE LEU SEQRES 9 A 479 TRP PRO LEU LEU HIS TYR HIS PRO GLY GLU ILE VAL PHE SEQRES 10 A 479 ASP GLU GLY ALA TRP ASP ALA TYR ARG GLU ALA ASN LEU SEQRES 11 A 479 LEU PHE ALA LYS THR ILE VAL LYS GLU ALA GLN ASP GLY SEQRES 12 A 479 ASP LEU ILE TRP VAL GLN ASP TYR HIS LEU MET LEU LEU SEQRES 13 A 479 PRO GLU LEU LEU ARG ALA GLU LEU ARG ALA ALA GLY LYS SEQRES 14 A 479 LYS ALA ASN LYS ILE GLY PHE PHE LEU HIS THR PRO PHE SEQRES 15 A 479 PRO SER SER GLU ILE TYR ARG ILE LEU PRO VAL ARG GLY SEQRES 16 A 479 GLN LEU LEU ARG GLY VAL LEU HIS CYS ASP LEU ILE GLY SEQRES 17 A 479 PHE HIS THR TYR ASP TYR ALA ARG HIS PHE LEU SER SER SEQRES 18 A 479 CYS SER HIS LEU LEU GLY LEU VAL THR THR PRO SER SER SEQRES 19 A 479 VAL LYS TYR GLU GLY ARG SER VAL ALA VAL GLY ALA PHE SEQRES 20 A 479 PRO ILE GLY ILE ASP PRO ASP LYS PHE THR ASP GLY LEU SEQRES 21 A 479 LYS SER PRO LYS VAL GLN ASN ARG ILE ALA SER LEU GLU SEQRES 22 A 479 ASN LYS PHE GLN GLY THR LYS LEU MET VAL SER VAL ASP SEQRES 23 A 479 ARG LEU ASP TYR ILE LYS GLY ILE PRO GLN LYS LEU HIS SEQRES 24 A 479 ALA LEU GLU VAL PHE LEU GLN ASN HIS PRO GLU TRP VAL SEQRES 25 A 479 GLY LYS VAL VAL LEU VAL GLN VAL ALA VAL PRO SER ARG SEQRES 26 A 479 GLN ASP VAL GLU GLU TYR GLN ASN LEU ARG ALA VAL VAL SEQRES 27 A 479 ASN GLU LEU VAL GLY ARG ILE ASN GLY LYS PHE GLY THR SEQRES 28 A 479 VAL ASP TYR MET PRO ILE HIS PHE MET HIS LYS SER VAL SEQRES 29 A 479 SER PHE ASP GLU LEU ILE ALA LEU TYR ALA ALA SER ASP SEQRES 30 A 479 ALA CYS VAL VAL SER SER THR ARG ASP GLY MET ASN LEU SEQRES 31 A 479 VAL SER PHE GLU TYR ILE ALA THR GLN GLN LYS ARG LYS SEQRES 32 A 479 GLY VAL LEU ILE LEU SER GLU PHE ALA GLY ALA ALA GLN SEQRES 33 A 479 SER LEU ASN GLY SER LEU VAL VAL ASN PRO TRP ASN THR SEQRES 34 A 479 GLU GLU LEU ALA ARG ALA TYR HIS GLU ALA VAL SER MET SEQRES 35 A 479 SER ASP GLU GLN ARG ALA ARG LYS PHE GLU LYS LEU TYR SEQRES 36 A 479 LYS TYR ILE SER LYS TYR THR SER ALA PHE TRP GLY LYS SEQRES 37 A 479 SER PHE VAL ALA GLU LEU LEU GLN CYS SER SER SEQRES 1 B 479 MET SER SER THR ASN GLY SER GLU GLY ASP HIS ARG LEU SEQRES 2 B 479 LEU ILE VAL SER ASN ARG LEU PRO ILE THR ILE ARG ARG SEQRES 3 B 479 SER GLU GLY GLY LYS TYR GLU PHE SER MET SER SER GLY SEQRES 4 B 479 GLY LEU VAL THR GLY LEU SER GLY LEU SER LYS THR THR SEQRES 5 B 479 THR PHE GLN TRP TYR GLY TRP PRO GLY LEU GLU VAL PRO SEQRES 6 B 479 GLU ASP GLU LEU GLY SER VAL LYS LYS ARG LEU LYS ASP SEQRES 7 B 479 GLU PHE ASN ALA THR PRO VAL PHE MET ASP ASP LYS LEU SEQRES 8 B 479 ALA ASP ARG HIS TYR ASN GLY PHE SER ASN SER ILE LEU SEQRES 9 B 479 TRP PRO LEU LEU HIS TYR HIS PRO GLY GLU ILE VAL PHE SEQRES 10 B 479 ASP GLU GLY ALA TRP ASP ALA TYR ARG GLU ALA ASN LEU SEQRES 11 B 479 LEU PHE ALA LYS THR ILE VAL LYS GLU ALA GLN ASP GLY SEQRES 12 B 479 ASP LEU ILE TRP VAL GLN ASP TYR HIS LEU MET LEU LEU SEQRES 13 B 479 PRO GLU LEU LEU ARG ALA GLU LEU ARG ALA ALA GLY LYS SEQRES 14 B 479 LYS ALA ASN LYS ILE GLY PHE PHE LEU HIS THR PRO PHE SEQRES 15 B 479 PRO SER SER GLU ILE TYR ARG ILE LEU PRO VAL ARG GLY SEQRES 16 B 479 GLN LEU LEU ARG GLY VAL LEU HIS CYS ASP LEU ILE GLY SEQRES 17 B 479 PHE HIS THR TYR ASP TYR ALA ARG HIS PHE LEU SER SER SEQRES 18 B 479 CYS SER HIS LEU LEU GLY LEU VAL THR THR PRO SER SER SEQRES 19 B 479 VAL LYS TYR GLU GLY ARG SER VAL ALA VAL GLY ALA PHE SEQRES 20 B 479 PRO ILE GLY ILE ASP PRO ASP LYS PHE THR ASP GLY LEU SEQRES 21 B 479 LYS SER PRO LYS VAL GLN ASN ARG ILE ALA SER LEU GLU SEQRES 22 B 479 ASN LYS PHE GLN GLY THR LYS LEU MET VAL SER VAL ASP SEQRES 23 B 479 ARG LEU ASP TYR ILE LYS GLY ILE PRO GLN LYS LEU HIS SEQRES 24 B 479 ALA LEU GLU VAL PHE LEU GLN ASN HIS PRO GLU TRP VAL SEQRES 25 B 479 GLY LYS VAL VAL LEU VAL GLN VAL ALA VAL PRO SER ARG SEQRES 26 B 479 GLN ASP VAL GLU GLU TYR GLN ASN LEU ARG ALA VAL VAL SEQRES 27 B 479 ASN GLU LEU VAL GLY ARG ILE ASN GLY LYS PHE GLY THR SEQRES 28 B 479 VAL ASP TYR MET PRO ILE HIS PHE MET HIS LYS SER VAL SEQRES 29 B 479 SER PHE ASP GLU LEU ILE ALA LEU TYR ALA ALA SER ASP SEQRES 30 B 479 ALA CYS VAL VAL SER SER THR ARG ASP GLY MET ASN LEU SEQRES 31 B 479 VAL SER PHE GLU TYR ILE ALA THR GLN GLN LYS ARG LYS SEQRES 32 B 479 GLY VAL LEU ILE LEU SER GLU PHE ALA GLY ALA ALA GLN SEQRES 33 B 479 SER LEU ASN GLY SER LEU VAL VAL ASN PRO TRP ASN THR SEQRES 34 B 479 GLU GLU LEU ALA ARG ALA TYR HIS GLU ALA VAL SER MET SEQRES 35 B 479 SER ASP GLU GLN ARG ALA ARG LYS PHE GLU LYS LEU TYR SEQRES 36 B 479 LYS TYR ILE SER LYS TYR THR SER ALA PHE TRP GLY LYS SEQRES 37 B 479 SER PHE VAL ALA GLU LEU LEU GLN CYS SER SER SEQRES 1 C 479 MET SER SER THR ASN GLY SER GLU GLY ASP HIS ARG LEU SEQRES 2 C 479 LEU ILE VAL SER ASN ARG LEU PRO ILE THR ILE ARG ARG SEQRES 3 C 479 SER GLU GLY GLY LYS TYR GLU PHE SER MET SER SER GLY SEQRES 4 C 479 GLY LEU VAL THR GLY LEU SER GLY LEU SER LYS THR THR SEQRES 5 C 479 THR PHE GLN TRP TYR GLY TRP PRO GLY LEU GLU VAL PRO SEQRES 6 C 479 GLU ASP GLU LEU GLY SER VAL LYS LYS ARG LEU LYS ASP SEQRES 7 C 479 GLU PHE ASN ALA THR PRO VAL PHE MET ASP ASP LYS LEU SEQRES 8 C 479 ALA ASP ARG HIS TYR ASN GLY PHE SER ASN SER ILE LEU SEQRES 9 C 479 TRP PRO LEU LEU HIS TYR HIS PRO GLY GLU ILE VAL PHE SEQRES 10 C 479 ASP GLU GLY ALA TRP ASP ALA TYR ARG GLU ALA ASN LEU SEQRES 11 C 479 LEU PHE ALA LYS THR ILE VAL LYS GLU ALA GLN ASP GLY SEQRES 12 C 479 ASP LEU ILE TRP VAL GLN ASP TYR HIS LEU MET LEU LEU SEQRES 13 C 479 PRO GLU LEU LEU ARG ALA GLU LEU ARG ALA ALA GLY LYS SEQRES 14 C 479 LYS ALA ASN LYS ILE GLY PHE PHE LEU HIS THR PRO PHE SEQRES 15 C 479 PRO SER SER GLU ILE TYR ARG ILE LEU PRO VAL ARG GLY SEQRES 16 C 479 GLN LEU LEU ARG GLY VAL LEU HIS CYS ASP LEU ILE GLY SEQRES 17 C 479 PHE HIS THR TYR ASP TYR ALA ARG HIS PHE LEU SER SER SEQRES 18 C 479 CYS SER HIS LEU LEU GLY LEU VAL THR THR PRO SER SER SEQRES 19 C 479 VAL LYS TYR GLU GLY ARG SER VAL ALA VAL GLY ALA PHE SEQRES 20 C 479 PRO ILE GLY ILE ASP PRO ASP LYS PHE THR ASP GLY LEU SEQRES 21 C 479 LYS SER PRO LYS VAL GLN ASN ARG ILE ALA SER LEU GLU SEQRES 22 C 479 ASN LYS PHE GLN GLY THR LYS LEU MET VAL SER VAL ASP SEQRES 23 C 479 ARG LEU ASP TYR ILE LYS GLY ILE PRO GLN LYS LEU HIS SEQRES 24 C 479 ALA LEU GLU VAL PHE LEU GLN ASN HIS PRO GLU TRP VAL SEQRES 25 C 479 GLY LYS VAL VAL LEU VAL GLN VAL ALA VAL PRO SER ARG SEQRES 26 C 479 GLN ASP VAL GLU GLU TYR GLN ASN LEU ARG ALA VAL VAL SEQRES 27 C 479 ASN GLU LEU VAL GLY ARG ILE ASN GLY LYS PHE GLY THR SEQRES 28 C 479 VAL ASP TYR MET PRO ILE HIS PHE MET HIS LYS SER VAL SEQRES 29 C 479 SER PHE ASP GLU LEU ILE ALA LEU TYR ALA ALA SER ASP SEQRES 30 C 479 ALA CYS VAL VAL SER SER THR ARG ASP GLY MET ASN LEU SEQRES 31 C 479 VAL SER PHE GLU TYR ILE ALA THR GLN GLN LYS ARG LYS SEQRES 32 C 479 GLY VAL LEU ILE LEU SER GLU PHE ALA GLY ALA ALA GLN SEQRES 33 C 479 SER LEU ASN GLY SER LEU VAL VAL ASN PRO TRP ASN THR SEQRES 34 C 479 GLU GLU LEU ALA ARG ALA TYR HIS GLU ALA VAL SER MET SEQRES 35 C 479 SER ASP GLU GLN ARG ALA ARG LYS PHE GLU LYS LEU TYR SEQRES 36 C 479 LYS TYR ILE SER LYS TYR THR SER ALA PHE TRP GLY LYS SEQRES 37 C 479 SER PHE VAL ALA GLU LEU LEU GLN CYS SER SER SEQRES 1 D 479 MET SER SER THR ASN GLY SER GLU GLY ASP HIS ARG LEU SEQRES 2 D 479 LEU ILE VAL SER ASN ARG LEU PRO ILE THR ILE ARG ARG SEQRES 3 D 479 SER GLU GLY GLY LYS TYR GLU PHE SER MET SER SER GLY SEQRES 4 D 479 GLY LEU VAL THR GLY LEU SER GLY LEU SER LYS THR THR SEQRES 5 D 479 THR PHE GLN TRP TYR GLY TRP PRO GLY LEU GLU VAL PRO SEQRES 6 D 479 GLU ASP GLU LEU GLY SER VAL LYS LYS ARG LEU LYS ASP SEQRES 7 D 479 GLU PHE ASN ALA THR PRO VAL PHE MET ASP ASP LYS LEU SEQRES 8 D 479 ALA ASP ARG HIS TYR ASN GLY PHE SER ASN SER ILE LEU SEQRES 9 D 479 TRP PRO LEU LEU HIS TYR HIS PRO GLY GLU ILE VAL PHE SEQRES 10 D 479 ASP GLU GLY ALA TRP ASP ALA TYR ARG GLU ALA ASN LEU SEQRES 11 D 479 LEU PHE ALA LYS THR ILE VAL LYS GLU ALA GLN ASP GLY SEQRES 12 D 479 ASP LEU ILE TRP VAL GLN ASP TYR HIS LEU MET LEU LEU SEQRES 13 D 479 PRO GLU LEU LEU ARG ALA GLU LEU ARG ALA ALA GLY LYS SEQRES 14 D 479 LYS ALA ASN LYS ILE GLY PHE PHE LEU HIS THR PRO PHE SEQRES 15 D 479 PRO SER SER GLU ILE TYR ARG ILE LEU PRO VAL ARG GLY SEQRES 16 D 479 GLN LEU LEU ARG GLY VAL LEU HIS CYS ASP LEU ILE GLY SEQRES 17 D 479 PHE HIS THR TYR ASP TYR ALA ARG HIS PHE LEU SER SER SEQRES 18 D 479 CYS SER HIS LEU LEU GLY LEU VAL THR THR PRO SER SER SEQRES 19 D 479 VAL LYS TYR GLU GLY ARG SER VAL ALA VAL GLY ALA PHE SEQRES 20 D 479 PRO ILE GLY ILE ASP PRO ASP LYS PHE THR ASP GLY LEU SEQRES 21 D 479 LYS SER PRO LYS VAL GLN ASN ARG ILE ALA SER LEU GLU SEQRES 22 D 479 ASN LYS PHE GLN GLY THR LYS LEU MET VAL SER VAL ASP SEQRES 23 D 479 ARG LEU ASP TYR ILE LYS GLY ILE PRO GLN LYS LEU HIS SEQRES 24 D 479 ALA LEU GLU VAL PHE LEU GLN ASN HIS PRO GLU TRP VAL SEQRES 25 D 479 GLY LYS VAL VAL LEU VAL GLN VAL ALA VAL PRO SER ARG SEQRES 26 D 479 GLN ASP VAL GLU GLU TYR GLN ASN LEU ARG ALA VAL VAL SEQRES 27 D 479 ASN GLU LEU VAL GLY ARG ILE ASN GLY LYS PHE GLY THR SEQRES 28 D 479 VAL ASP TYR MET PRO ILE HIS PHE MET HIS LYS SER VAL SEQRES 29 D 479 SER PHE ASP GLU LEU ILE ALA LEU TYR ALA ALA SER ASP SEQRES 30 D 479 ALA CYS VAL VAL SER SER THR ARG ASP GLY MET ASN LEU SEQRES 31 D 479 VAL SER PHE GLU TYR ILE ALA THR GLN GLN LYS ARG LYS SEQRES 32 D 479 GLY VAL LEU ILE LEU SER GLU PHE ALA GLY ALA ALA GLN SEQRES 33 D 479 SER LEU ASN GLY SER LEU VAL VAL ASN PRO TRP ASN THR SEQRES 34 D 479 GLU GLU LEU ALA ARG ALA TYR HIS GLU ALA VAL SER MET SEQRES 35 D 479 SER ASP GLU GLN ARG ALA ARG LYS PHE GLU LYS LEU TYR SEQRES 36 D 479 LYS TYR ILE SER LYS TYR THR SER ALA PHE TRP GLY LYS SEQRES 37 D 479 SER PHE VAL ALA GLU LEU LEU GLN CYS SER SER HET UDP A 501 36 HET VDM A 502 48 HET UDP B 501 36 HET VDM B 502 48 HET UDP C 501 36 HET VDM C 502 48 HET UDP D 501 36 HET VDM D 502 48 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM VDM (1S,2S,3R,6S)-4-(HYDROXYMETHYL)-6-{[(1S,2S,3S,4R,5R)-2, HETNAM 2 VDM 3,4-TRIHYDROXY-5-(HYDROXYMETHYL) HETNAM 3 VDM CYCLOHEXYL]AMINO}CYCLOHEX-4-ENE-1,2,3-TRIOL HETSYN VDM VALIDOXYLAMINE FORMUL 5 UDP 4(C9 H14 N2 O12 P2) FORMUL 6 VDM 4(C14 H25 N O8) FORMUL 13 HOH *192(H2 O) HELIX 1 AA1 PRO A 65 ASP A 67 5 3 HELIX 2 AA2 GLU A 68 ASN A 81 1 14 HELIX 3 AA3 ASP A 88 ASN A 97 1 10 HELIX 4 AA4 ILE A 103 HIS A 109 1 7 HELIX 5 AA5 ASP A 118 ALA A 140 1 23 HELIX 6 AA6 TYR A 151 MET A 154 5 4 HELIX 7 AA7 LEU A 155 ARG A 165 1 11 HELIX 8 AA8 SER A 184 ARG A 189 1 6 HELIX 9 AA9 VAL A 193 LEU A 202 1 10 HELIX 10 AB1 THR A 211 LEU A 226 1 16 HELIX 11 AB2 ASP A 252 LYS A 261 1 10 HELIX 12 AB3 SER A 262 PHE A 276 1 15 HELIX 13 AB4 ASP A 289 LYS A 292 5 4 HELIX 14 AB5 GLY A 293 HIS A 308 1 16 HELIX 15 AB6 PRO A 309 VAL A 312 5 4 HELIX 16 AB7 VAL A 328 GLY A 350 1 23 HELIX 17 AB8 SER A 365 SER A 376 1 12 HELIX 18 AB9 LEU A 390 THR A 398 1 9 HELIX 19 AC1 GLY A 413 LEU A 418 1 6 HELIX 20 AC2 ASN A 428 SER A 441 1 14 HELIX 21 AC3 SER A 443 TYR A 461 1 19 HELIX 22 AC4 THR A 462 GLN A 476 1 15 HELIX 23 AC5 PRO B 65 ASP B 67 5 3 HELIX 24 AC6 GLU B 68 ASN B 81 1 14 HELIX 25 AC7 ASP B 88 ASN B 97 1 10 HELIX 26 AC8 ILE B 103 HIS B 109 1 7 HELIX 27 AC9 ASP B 118 ALA B 140 1 23 HELIX 28 AD1 TYR B 151 MET B 154 5 4 HELIX 29 AD2 LEU B 155 ARG B 165 1 11 HELIX 30 AD3 SER B 184 ARG B 189 1 6 HELIX 31 AD4 VAL B 193 LEU B 202 1 10 HELIX 32 AD5 THR B 211 LEU B 226 1 16 HELIX 33 AD6 ASP B 252 LEU B 260 1 9 HELIX 34 AD7 SER B 262 PHE B 276 1 15 HELIX 35 AD8 ASP B 289 LYS B 292 5 4 HELIX 36 AD9 GLY B 293 HIS B 308 1 16 HELIX 37 AE1 PRO B 309 VAL B 312 5 4 HELIX 38 AE2 VAL B 328 GLY B 350 1 23 HELIX 39 AE3 SER B 365 SER B 376 1 12 HELIX 40 AE4 LEU B 390 THR B 398 1 9 HELIX 41 AE5 GLY B 413 LEU B 418 1 6 HELIX 42 AE6 ASN B 428 SER B 441 1 14 HELIX 43 AE7 SER B 443 TYR B 461 1 19 HELIX 44 AE8 THR B 462 GLN B 476 1 15 HELIX 45 AE9 PRO C 65 ASP C 67 5 3 HELIX 46 AF1 GLU C 68 PHE C 80 1 13 HELIX 47 AF2 ASP C 88 ASN C 97 1 10 HELIX 48 AF3 ILE C 103 HIS C 109 1 7 HELIX 49 AF4 ASP C 118 ALA C 140 1 23 HELIX 50 AF5 TYR C 151 MET C 154 5 4 HELIX 51 AF6 LEU C 155 ARG C 165 1 11 HELIX 52 AF7 SER C 184 ARG C 189 1 6 HELIX 53 AF8 VAL C 193 HIS C 203 1 11 HELIX 54 AF9 THR C 211 LEU C 226 1 16 HELIX 55 AG1 ASP C 252 LEU C 260 1 9 HELIX 56 AG2 SER C 262 PHE C 276 1 15 HELIX 57 AG3 ASP C 289 LYS C 292 5 4 HELIX 58 AG4 GLY C 293 HIS C 308 1 16 HELIX 59 AG5 PRO C 309 VAL C 312 5 4 HELIX 60 AG6 VAL C 328 GLY C 350 1 23 HELIX 61 AG7 SER C 365 SER C 376 1 12 HELIX 62 AG8 LEU C 390 THR C 398 1 9 HELIX 63 AG9 ALA C 412 SER C 417 5 6 HELIX 64 AH1 ASN C 428 SER C 441 1 14 HELIX 65 AH2 SER C 443 TYR C 461 1 19 HELIX 66 AH3 THR C 462 GLN C 476 1 15 HELIX 67 AH4 PRO D 65 ASP D 67 5 3 HELIX 68 AH5 GLU D 68 PHE D 80 1 13 HELIX 69 AH6 ASP D 88 ASN D 97 1 10 HELIX 70 AH7 ILE D 103 HIS D 109 1 7 HELIX 71 AH8 ASP D 118 ALA D 140 1 23 HELIX 72 AH9 TYR D 151 MET D 154 5 4 HELIX 73 AI1 LEU D 155 ARG D 165 1 11 HELIX 74 AI2 SER D 184 ARG D 189 1 6 HELIX 75 AI3 VAL D 193 LEU D 202 1 10 HELIX 76 AI4 THR D 211 LEU D 226 1 16 HELIX 77 AI5 ASP D 252 SER D 262 1 11 HELIX 78 AI6 SER D 262 PHE D 276 1 15 HELIX 79 AI7 ASP D 289 LYS D 292 5 4 HELIX 80 AI8 GLY D 293 HIS D 308 1 16 HELIX 81 AI9 PRO D 309 VAL D 312 5 4 HELIX 82 AJ1 VAL D 328 GLY D 350 1 23 HELIX 83 AJ2 SER D 365 ALA D 375 1 11 HELIX 84 AJ3 LEU D 390 THR D 398 1 9 HELIX 85 AJ4 ALA D 412 SER D 417 5 6 HELIX 86 AJ5 ASN D 428 SER D 441 1 14 HELIX 87 AJ6 SER D 443 TYR D 461 1 19 HELIX 88 AJ7 THR D 462 GLN D 476 1 15 SHEET 1 AA1 9 ALA A 82 PRO A 84 0 SHEET 2 AA1 9 PHE A 54 TRP A 59 1 N TRP A 56 O THR A 83 SHEET 3 AA1 9 LEU A 13 ARG A 19 1 N ILE A 15 O TYR A 57 SHEET 4 AA1 9 LEU A 145 GLN A 149 1 O LEU A 145 N LEU A 14 SHEET 5 AA1 9 LYS A 173 PHE A 177 1 O GLY A 175 N VAL A 148 SHEET 6 AA1 9 LEU A 206 PHE A 209 1 O GLY A 208 N PHE A 176 SHEET 7 AA1 9 ARG A 240 ALA A 246 1 O ALA A 243 N ILE A 207 SHEET 8 AA1 9 SER A 234 TYR A 237 -1 N VAL A 235 O VAL A 242 SHEET 9 AA1 9 THR A 230 THR A 231 -1 N THR A 231 O SER A 234 SHEET 1 AA2 2 ILE A 22 ARG A 25 0 SHEET 2 AA2 2 GLU A 33 MET A 36 -1 O SER A 35 N THR A 23 SHEET 1 AA3 6 ILE A 357 MET A 360 0 SHEET 2 AA3 6 VAL A 315 VAL A 322 1 N ALA A 321 O MET A 360 SHEET 3 AA3 6 LYS A 280 ARG A 287 1 N MET A 282 O VAL A 318 SHEET 4 AA3 6 ALA A 378 VAL A 381 1 O ALA A 378 N VAL A 283 SHEET 5 AA3 6 VAL A 405 SER A 409 1 O ILE A 407 N CYS A 379 SHEET 6 AA3 6 LEU A 422 VAL A 424 1 O LEU A 422 N LEU A 406 SHEET 1 AA4 9 ALA B 82 PRO B 84 0 SHEET 2 AA4 9 PHE B 54 TRP B 59 1 N TRP B 56 O THR B 83 SHEET 3 AA4 9 LEU B 13 ARG B 19 1 N ILE B 15 O TYR B 57 SHEET 4 AA4 9 LEU B 145 GLN B 149 1 O TRP B 147 N LEU B 14 SHEET 5 AA4 9 LYS B 173 LEU B 178 1 O GLY B 175 N VAL B 148 SHEET 6 AA4 9 LEU B 206 PHE B 209 1 O GLY B 208 N PHE B 176 SHEET 7 AA4 9 ARG B 240 ALA B 246 1 O ALA B 243 N ILE B 207 SHEET 8 AA4 9 SER B 234 TYR B 237 -1 N TYR B 237 O ARG B 240 SHEET 9 AA4 9 THR B 230 THR B 231 -1 N THR B 231 O SER B 234 SHEET 1 AA5 2 ILE B 22 ILE B 24 0 SHEET 2 AA5 2 PHE B 34 MET B 36 -1 O SER B 35 N THR B 23 SHEET 1 AA6 6 ILE B 357 MET B 360 0 SHEET 2 AA6 6 VAL B 315 VAL B 322 1 N ALA B 321 O MET B 360 SHEET 3 AA6 6 LYS B 280 ARG B 287 1 N SER B 284 O VAL B 320 SHEET 4 AA6 6 ALA B 378 VAL B 381 1 O ALA B 378 N VAL B 283 SHEET 5 AA6 6 VAL B 405 SER B 409 1 O ILE B 407 N CYS B 379 SHEET 6 AA6 6 LEU B 422 VAL B 424 1 O LEU B 422 N LEU B 406 SHEET 1 AA7 9 ALA C 82 PRO C 84 0 SHEET 2 AA7 9 THR C 53 TRP C 59 1 N TRP C 56 O THR C 83 SHEET 3 AA7 9 ARG C 12 ARG C 19 1 N LEU C 13 O THR C 53 SHEET 4 AA7 9 LEU C 145 GLN C 149 1 O LEU C 145 N LEU C 14 SHEET 5 AA7 9 LYS C 173 PHE C 177 1 O GLY C 175 N VAL C 148 SHEET 6 AA7 9 LEU C 206 PHE C 209 1 O GLY C 208 N PHE C 176 SHEET 7 AA7 9 ARG C 240 ALA C 246 1 O ALA C 243 N ILE C 207 SHEET 8 AA7 9 SER C 234 TYR C 237 -1 N VAL C 235 O VAL C 242 SHEET 9 AA7 9 THR C 230 THR C 231 -1 N THR C 231 O SER C 234 SHEET 1 AA8 6 ILE C 357 HIS C 361 0 SHEET 2 AA8 6 VAL C 315 VAL C 322 1 N LEU C 317 O HIS C 358 SHEET 3 AA8 6 LYS C 280 ARG C 287 1 N MET C 282 O VAL C 318 SHEET 4 AA8 6 ALA C 378 VAL C 381 1 O ALA C 378 N VAL C 283 SHEET 5 AA8 6 VAL C 405 SER C 409 1 O ILE C 407 N VAL C 381 SHEET 6 AA8 6 LEU C 422 VAL C 424 1 O LEU C 422 N LEU C 406 SHEET 1 AA9 9 ALA D 82 PRO D 84 0 SHEET 2 AA9 9 THR D 53 TRP D 59 1 N TRP D 56 O THR D 83 SHEET 3 AA9 9 ARG D 12 ARG D 19 1 N LEU D 13 O THR D 53 SHEET 4 AA9 9 LEU D 145 GLN D 149 1 O LEU D 145 N LEU D 14 SHEET 5 AA9 9 LYS D 173 PHE D 177 1 O GLY D 175 N VAL D 148 SHEET 6 AA9 9 LEU D 206 PHE D 209 1 O GLY D 208 N PHE D 176 SHEET 7 AA9 9 ARG D 240 ALA D 246 1 O ALA D 243 N ILE D 207 SHEET 8 AA9 9 SER D 234 TYR D 237 -1 N VAL D 235 O VAL D 242 SHEET 9 AA9 9 THR D 230 THR D 231 -1 N THR D 231 O SER D 234 SHEET 1 AB1 2 ILE D 22 ILE D 24 0 SHEET 2 AB1 2 PHE D 34 MET D 36 -1 O SER D 35 N THR D 23 SHEET 1 AB2 6 ILE D 357 HIS D 361 0 SHEET 2 AB2 6 VAL D 315 VAL D 322 1 N ALA D 321 O MET D 360 SHEET 3 AB2 6 LYS D 280 ARG D 287 1 N MET D 282 O VAL D 316 SHEET 4 AB2 6 ALA D 378 VAL D 381 1 O ALA D 378 N VAL D 283 SHEET 5 AB2 6 VAL D 405 SER D 409 1 O ILE D 407 N VAL D 381 SHEET 6 AB2 6 LEU D 422 VAL D 424 1 O LEU D 422 N LEU D 406 SITE 1 AC1 14 VAL A 285 ARG A 287 LYS A 292 VAL A 322 SITE 2 AC1 14 SER A 363 VAL A 364 LEU A 369 ASN A 389 SITE 3 AC1 14 LEU A 390 VAL A 391 GLU A 394 VDM A 502 SITE 4 AC1 14 HOH A 623 HOH A 631 SITE 1 AC2 11 TRP A 105 ASP A 150 HIS A 152 HIS A 179 SITE 2 AC2 11 ASP A 386 GLY A 387 MET A 388 ASN A 389 SITE 3 AC2 11 UDP A 501 HOH A 617 HOH A 622 SITE 1 AC3 13 VAL B 285 ARG B 287 LYS B 292 VAL B 322 SITE 2 AC3 13 SER B 363 VAL B 364 LEU B 369 LEU B 390 SITE 3 AC3 13 VAL B 391 GLU B 394 VDM B 502 HOH B 614 SITE 4 AC3 13 HOH B 633 SITE 1 AC4 12 ASP B 150 HIS B 152 HIS B 179 ARG B 287 SITE 2 AC4 12 ARG B 325 ASP B 386 GLY B 387 MET B 388 SITE 3 AC4 12 ASN B 389 LEU B 390 UDP B 501 HOH B 613 SITE 1 AC5 13 VAL C 285 ARG C 287 LYS C 292 VAL C 322 SITE 2 AC5 13 SER C 363 VAL C 364 LEU C 369 LEU C 390 SITE 3 AC5 13 VAL C 391 GLU C 394 VDM C 502 HOH C 609 SITE 4 AC5 13 HOH C 614 SITE 1 AC6 12 ASP C 150 HIS C 152 HIS C 179 ILE C 249 SITE 2 AC6 12 ARG C 325 ASP C 386 GLY C 387 MET C 388 SITE 3 AC6 12 ASN C 389 LEU C 390 UDP C 501 HOH C 615 SITE 1 AC7 11 ARG D 287 LYS D 292 VAL D 322 SER D 363 SITE 2 AC7 11 VAL D 364 LEU D 369 LEU D 390 VAL D 391 SITE 3 AC7 11 GLU D 394 VDM D 502 HOH D 622 SITE 1 AC8 12 ASP D 150 HIS D 152 HIS D 179 ARG D 287 SITE 2 AC8 12 ARG D 325 ASP D 386 GLY D 387 MET D 388 SITE 3 AC8 12 ASN D 389 LEU D 390 UDP D 501 HOH D 619 CRYST1 88.276 130.581 184.813 90.00 90.00 90.00 P 2 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011328 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007658 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005411 0.00000