HEADER HYDROLASE 28-JAN-16 5HW5 TITLE CRYSTAL STRUCTURE OF TEM1 BETA-LACTAMASE IN THE PRESENCE OF 2.0 MPA TITLE 2 XENON COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE TEM; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: IRT-4,PENICILLINASE,TEM-1,TEM-16/CAZ-7,TEM-2,TEM-24/CAZ-6, COMPND 5 TEM-3,TEM-4,TEM-5,TEM-6,TEM-8/CAZ-2; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLA, BLAT-3, BLAT-4, BLAT-5, BLAT-6; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJ411 KEYWDS HYDROLASE, XENON EXPDTA X-RAY DIFFRACTION AUTHOR B.W.ROOSE,I.J.DMOCHOWSKI REVDAT 4 27-SEP-23 5HW5 1 REMARK REVDAT 3 25-DEC-19 5HW5 1 REMARK REVDAT 2 20-SEP-17 5HW5 1 REMARK REVDAT 1 28-JUN-17 5HW5 0 JRNL AUTH B.W.ROOSE,Y.WANG,I.J.DMOCHOWSKI JRNL TITL STRUCTURE OF TEM1 BETA-LACTAMASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 180094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 18166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 15.2539 - 3.8084 0.95 17346 900 0.1561 0.1984 REMARK 3 2 3.8084 - 3.0306 0.95 17324 837 0.1393 0.1787 REMARK 3 3 3.0306 - 2.6498 0.94 17246 913 0.1574 0.2071 REMARK 3 4 2.6498 - 2.4086 0.94 17258 774 0.1625 0.2026 REMARK 3 5 2.4086 - 2.2365 0.93 17089 938 0.1696 0.2215 REMARK 3 6 2.2365 - 2.1050 0.93 17134 867 0.1717 0.2137 REMARK 3 7 2.1050 - 1.9998 0.93 17004 878 0.1805 0.2138 REMARK 3 8 1.9998 - 1.9129 0.93 17128 879 0.1828 0.2094 REMARK 3 9 1.9129 - 1.8394 0.93 16946 833 0.1837 0.2203 REMARK 3 10 1.8394 - 1.7760 0.92 16898 901 0.1992 0.2298 REMARK 3 11 1.7760 - 1.7206 0.92 16952 886 0.2067 0.2181 REMARK 3 12 1.7206 - 1.6715 0.92 16924 811 0.2158 0.2601 REMARK 3 13 1.6715 - 1.6275 0.92 16791 810 0.2177 0.2428 REMARK 3 14 1.6275 - 1.5878 0.91 16784 882 0.2246 0.2486 REMARK 3 15 1.5878 - 1.5518 0.91 16595 906 0.2347 0.2735 REMARK 3 16 1.5518 - 1.5188 0.91 16910 861 0.2450 0.2624 REMARK 3 17 1.5188 - 1.4884 0.91 16560 919 0.2465 0.2744 REMARK 3 18 1.4884 - 1.4604 0.91 16648 878 0.2622 0.2682 REMARK 3 19 1.4604 - 1.4343 0.90 16392 1047 0.2778 0.2861 REMARK 3 20 1.4343 - 1.4100 0.90 16548 883 0.2869 0.3271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.1400 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8214 REMARK 3 ANGLE : 1.239 11151 REMARK 3 CHIRALITY : 0.052 1295 REMARK 3 PLANARITY : 0.006 1455 REMARK 3 DIHEDRAL : 12.539 3063 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HW5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217668. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 - 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 180127 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 51.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.58300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5HVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% (V/V) TACSIMATE (PH 6.0), 0.1 M BIS REMARK 280 -TRIS (PH 6.5), 20% (W/V) PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.31000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 ASN A 52 CG OD1 ND2 REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLN A 99 CG CD OE1 NE2 REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 LYS A 256 CD CE NZ REMARK 470 GLU A 281 CD OE1 OE2 REMARK 470 LYS B 32 CD CE NZ REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLU B 104 CG CD OE1 OE2 REMARK 470 LYS B 256 CD CE NZ REMARK 470 GLU C 28 CD OE1 OE2 REMARK 470 ASN C 52 CG OD1 ND2 REMARK 470 LYS C 55 CG CD CE NZ REMARK 470 GLU C 104 CG CD OE1 OE2 REMARK 470 LYS C 192 CG CD CE NZ REMARK 470 GLU D 28 CG CD OE1 OE2 REMARK 470 GLN D 99 CG CD OE1 NE2 REMARK 470 ASN D 100 CG OD1 ND2 REMARK 470 LYS D 111 CD CE NZ REMARK 470 LYS D 146 CG CD CE NZ REMARK 470 LYS D 256 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP D 35 O HOH D 401 1.97 REMARK 500 OE2 GLU C 177 O HOH C 401 2.02 REMARK 500 O HOH D 421 O HOH D 605 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 561 O HOH C 564 2556 2.06 REMARK 500 O HOH C 576 O HOH D 410 2546 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 49 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 69 -142.84 52.99 REMARK 500 TYR A 105 79.33 59.08 REMARK 500 LEU A 220 -123.27 -103.69 REMARK 500 MET B 69 -141.32 50.94 REMARK 500 TYR B 105 77.08 58.79 REMARK 500 LEU B 220 -125.35 -96.44 REMARK 500 SER B 258 -2.68 -140.29 REMARK 500 MET C 69 -141.90 50.40 REMARK 500 TYR C 105 76.88 56.95 REMARK 500 LEU C 220 -125.42 -100.99 REMARK 500 SER C 258 -7.68 -145.34 REMARK 500 MET D 69 -143.12 49.75 REMARK 500 GLU D 104 127.49 -36.83 REMARK 500 TYR D 105 78.58 60.19 REMARK 500 LEU D 220 -123.80 -101.25 REMARK 500 SER D 258 -3.16 -142.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XE D 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HVI RELATED DB: PDB REMARK 900 RELATED ID: 5HW1 RELATED DB: PDB DBREF 5HW5 A 26 290 UNP P62593 BLAT_ECOLX 24 286 DBREF 5HW5 B 26 290 UNP P62593 BLAT_ECOLX 24 286 DBREF 5HW5 C 26 290 UNP P62593 BLAT_ECOLX 24 286 DBREF 5HW5 D 26 290 UNP P62593 BLAT_ECOLX 24 286 SEQADV 5HW5 THR A 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 5HW5 THR B 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 5HW5 THR C 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 5HW5 THR D 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQRES 1 A 263 HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU ASP SEQRES 2 A 263 GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP LEU SEQRES 3 A 263 ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU GLU SEQRES 4 A 263 ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU CYS SEQRES 5 A 263 GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU GLN SEQRES 6 A 263 LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU VAL SEQRES 7 A 263 GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP GLY SEQRES 8 A 263 MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR MET SEQRES 9 A 263 SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR ILE SEQRES 10 A 263 GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN MET SEQRES 11 A 263 GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 A 263 LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR THR SEQRES 13 A 263 THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU LEU SEQRES 14 A 263 THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN LEU SEQRES 15 A 263 ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO LEU SEQRES 16 A 263 LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA ASP SEQRES 17 A 263 LYS SER GLY ALA GLY GLU ARG GLY SER ARG GLY ILE ILE SEQRES 18 A 263 ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE VAL SEQRES 19 A 263 VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP GLU SEQRES 20 A 263 ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU ILE SEQRES 21 A 263 LYS HIS TRP SEQRES 1 B 263 HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU ASP SEQRES 2 B 263 GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP LEU SEQRES 3 B 263 ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU GLU SEQRES 4 B 263 ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU CYS SEQRES 5 B 263 GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU GLN SEQRES 6 B 263 LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU VAL SEQRES 7 B 263 GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP GLY SEQRES 8 B 263 MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR MET SEQRES 9 B 263 SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR ILE SEQRES 10 B 263 GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN MET SEQRES 11 B 263 GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 B 263 LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR THR SEQRES 13 B 263 THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU LEU SEQRES 14 B 263 THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN LEU SEQRES 15 B 263 ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO LEU SEQRES 16 B 263 LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA ASP SEQRES 17 B 263 LYS SER GLY ALA GLY GLU ARG GLY SER ARG GLY ILE ILE SEQRES 18 B 263 ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE VAL SEQRES 19 B 263 VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP GLU SEQRES 20 B 263 ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU ILE SEQRES 21 B 263 LYS HIS TRP SEQRES 1 C 263 HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU ASP SEQRES 2 C 263 GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP LEU SEQRES 3 C 263 ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU GLU SEQRES 4 C 263 ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU CYS SEQRES 5 C 263 GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU GLN SEQRES 6 C 263 LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU VAL SEQRES 7 C 263 GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP GLY SEQRES 8 C 263 MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR MET SEQRES 9 C 263 SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR ILE SEQRES 10 C 263 GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN MET SEQRES 11 C 263 GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 C 263 LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR THR SEQRES 13 C 263 THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU LEU SEQRES 14 C 263 THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN LEU SEQRES 15 C 263 ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO LEU SEQRES 16 C 263 LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA ASP SEQRES 17 C 263 LYS SER GLY ALA GLY GLU ARG GLY SER ARG GLY ILE ILE SEQRES 18 C 263 ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE VAL SEQRES 19 C 263 VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP GLU SEQRES 20 C 263 ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU ILE SEQRES 21 C 263 LYS HIS TRP SEQRES 1 D 263 HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU ASP SEQRES 2 D 263 GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP LEU SEQRES 3 D 263 ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU GLU SEQRES 4 D 263 ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU CYS SEQRES 5 D 263 GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU GLN SEQRES 6 D 263 LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU VAL SEQRES 7 D 263 GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP GLY SEQRES 8 D 263 MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR MET SEQRES 9 D 263 SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR ILE SEQRES 10 D 263 GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN MET SEQRES 11 D 263 GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO GLU SEQRES 12 D 263 LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR THR SEQRES 13 D 263 THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU LEU SEQRES 14 D 263 THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN LEU SEQRES 15 D 263 ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO LEU SEQRES 16 D 263 LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA ASP SEQRES 17 D 263 LYS SER GLY ALA GLY GLU ARG GLY SER ARG GLY ILE ILE SEQRES 18 D 263 ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE VAL SEQRES 19 D 263 VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP GLU SEQRES 20 D 263 ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU ILE SEQRES 21 D 263 LYS HIS TRP HET XE A 301 1 HET XE A 302 1 HET XE A 303 1 HET XE B 301 1 HET XE B 302 1 HET XE B 303 1 HET XE B 304 1 HET XE C 301 1 HET XE C 302 1 HET XE C 303 1 HET XE D 301 1 HET XE D 302 1 HET XE D 303 1 HETNAM XE XENON FORMUL 5 XE 13(XE) FORMUL 18 HOH *859(H2 O) HELIX 1 AA1 HIS A 26 GLY A 41 1 16 HELIX 2 AA2 THR A 71 ALA A 86 1 16 HELIX 3 AA3 SER A 98 LEU A 102 5 5 HELIX 4 AA4 VAL A 108 HIS A 112 5 5 HELIX 5 AA5 VAL A 119 MET A 129 1 11 HELIX 6 AA6 ASP A 131 GLY A 143 1 13 HELIX 7 AA7 GLY A 144 MET A 155 1 12 HELIX 8 AA8 PRO A 167 GLU A 171 5 5 HELIX 9 AA9 THR A 182 GLY A 196 1 15 HELIX 10 AB1 THR A 200 ALA A 213 1 14 HELIX 11 AB2 LEU A 220 LEU A 225 5 6 HELIX 12 AB3 THR A 271 HIS A 289 1 19 HELIX 13 AB4 PRO B 27 GLY B 41 1 15 HELIX 14 AB5 THR B 71 ALA B 86 1 16 HELIX 15 AB6 SER B 98 LEU B 102 5 5 HELIX 16 AB7 VAL B 108 HIS B 112 5 5 HELIX 17 AB8 VAL B 119 MET B 129 1 11 HELIX 18 AB9 ASP B 131 GLY B 143 1 13 HELIX 19 AC1 GLY B 144 MET B 155 1 12 HELIX 20 AC2 PRO B 167 GLU B 171 5 5 HELIX 21 AC3 THR B 182 GLY B 196 1 15 HELIX 22 AC4 THR B 200 ALA B 213 1 14 HELIX 23 AC5 LEU B 220 LEU B 225 5 6 HELIX 24 AC6 THR B 271 HIS B 289 1 19 HELIX 25 AC7 PRO C 27 GLY C 41 1 15 HELIX 26 AC8 THR C 71 ALA C 86 1 16 HELIX 27 AC9 SER C 98 LEU C 102 5 5 HELIX 28 AD1 VAL C 108 HIS C 112 5 5 HELIX 29 AD2 VAL C 119 MET C 129 1 11 HELIX 30 AD3 ASP C 131 GLY C 143 1 13 HELIX 31 AD4 GLY C 144 MET C 155 1 12 HELIX 32 AD5 PRO C 167 GLU C 171 5 5 HELIX 33 AD6 THR C 182 GLY C 196 1 15 HELIX 34 AD7 THR C 200 ALA C 213 1 14 HELIX 35 AD8 LEU C 220 LEU C 225 5 6 HELIX 36 AD9 THR C 271 HIS C 289 1 19 HELIX 37 AE1 PRO D 27 GLY D 41 1 15 HELIX 38 AE2 THR D 71 ALA D 86 1 16 HELIX 39 AE3 SER D 98 LEU D 102 5 5 HELIX 40 AE4 VAL D 108 HIS D 112 5 5 HELIX 41 AE5 VAL D 119 MET D 129 1 11 HELIX 42 AE6 ASP D 131 GLY D 143 1 13 HELIX 43 AE7 GLY D 144 MET D 155 1 12 HELIX 44 AE8 PRO D 167 GLU D 171 5 5 HELIX 45 AE9 THR D 182 GLY D 196 1 15 HELIX 46 AF1 THR D 200 ALA D 213 1 14 HELIX 47 AF2 LEU D 220 LEU D 225 5 6 HELIX 48 AF3 THR D 271 HIS D 289 1 19 SHEET 1 AA1 5 ILE A 56 PHE A 60 0 SHEET 2 AA1 5 ARG A 43 ASP A 50 -1 N TYR A 46 O PHE A 60 SHEET 3 AA1 5 ARG A 259 THR A 266 -1 O ILE A 260 N LEU A 49 SHEET 4 AA1 5 ARG A 244 GLY A 251 -1 N ILE A 246 O ILE A 263 SHEET 5 AA1 5 PHE A 230 ALA A 237 -1 N PHE A 230 O GLY A 251 SHEET 1 AA2 2 PHE A 66 PRO A 67 0 SHEET 2 AA2 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AA3 2 ARG A 94 ILE A 95 0 SHEET 2 AA3 2 MET A 117 THR A 118 -1 O MET A 117 N ILE A 95 SHEET 1 AA4 5 ILE B 56 PHE B 60 0 SHEET 2 AA4 5 ARG B 43 ASP B 50 -1 N TYR B 46 O PHE B 60 SHEET 3 AA4 5 ARG B 259 THR B 266 -1 O ILE B 260 N LEU B 49 SHEET 4 AA4 5 ARG B 244 GLY B 251 -1 N ILE B 246 O ILE B 263 SHEET 5 AA4 5 PHE B 230 ALA B 237 -1 N PHE B 230 O GLY B 251 SHEET 1 AA5 2 PHE B 66 PRO B 67 0 SHEET 2 AA5 2 THR B 180 THR B 181 -1 O THR B 181 N PHE B 66 SHEET 1 AA6 2 ARG B 94 ILE B 95 0 SHEET 2 AA6 2 MET B 117 THR B 118 -1 O MET B 117 N ILE B 95 SHEET 1 AA7 5 ILE C 56 PHE C 60 0 SHEET 2 AA7 5 ARG C 43 ASP C 50 -1 N GLU C 48 O GLU C 58 SHEET 3 AA7 5 ARG C 259 THR C 266 -1 O ILE C 260 N LEU C 49 SHEET 4 AA7 5 ARG C 244 GLY C 251 -1 N ILE C 246 O ILE C 263 SHEET 5 AA7 5 PHE C 230 ALA C 237 -1 N ALA C 232 O ALA C 249 SHEET 1 AA8 2 PHE C 66 PRO C 67 0 SHEET 2 AA8 2 THR C 180 THR C 181 -1 O THR C 181 N PHE C 66 SHEET 1 AA9 2 ARG C 94 ILE C 95 0 SHEET 2 AA9 2 MET C 117 THR C 118 -1 O MET C 117 N ILE C 95 SHEET 1 AB1 5 ILE D 56 PHE D 60 0 SHEET 2 AB1 5 ARG D 43 ASP D 50 -1 N GLU D 48 O LEU D 57 SHEET 3 AB1 5 ARG D 259 THR D 266 -1 O ILE D 260 N LEU D 49 SHEET 4 AB1 5 ARG D 244 GLY D 251 -1 N ALA D 248 O VAL D 261 SHEET 5 AB1 5 PHE D 230 ALA D 237 -1 N PHE D 230 O GLY D 251 SHEET 1 AB2 2 PHE D 66 PRO D 67 0 SHEET 2 AB2 2 THR D 180 THR D 181 -1 O THR D 181 N PHE D 66 SHEET 1 AB3 2 ARG D 94 ILE D 95 0 SHEET 2 AB3 2 MET D 117 THR D 118 -1 O MET D 117 N ILE D 95 SSBOND 1 CYS A 77 CYS A 123 1555 1555 2.09 SSBOND 2 CYS B 77 CYS B 123 1555 1555 2.11 SSBOND 3 CYS C 77 CYS C 123 1555 1555 2.10 SSBOND 4 CYS D 77 CYS D 123 1555 1555 2.11 CISPEP 1 GLU A 166 PRO A 167 0 2.51 CISPEP 2 GLU B 166 PRO B 167 0 4.37 CISPEP 3 GLU C 166 PRO C 167 0 3.70 CISPEP 4 GLU D 166 PRO D 167 0 2.86 SITE 1 AC1 3 LEU A 51 ILE A 208 PRO A 257 SITE 1 AC2 3 LEU A 221 LEU A 250 ILE A 287 SITE 1 AC3 3 LEU B 51 ILE B 208 PRO B 257 SITE 1 AC4 3 LEU B 221 LEU B 250 ILE B 287 SITE 1 AC5 1 GLU B 28 SITE 1 AC6 4 LEU C 221 LEU C 225 LEU C 250 ILE C 287 SITE 1 AC7 3 LEU C 51 ILE C 208 PRO C 257 SITE 1 AC8 3 LEU D 221 LEU D 250 ILE D 287 SITE 1 AC9 3 LEU D 51 ILE D 208 PRO D 257 CRYST1 60.440 84.620 96.011 90.00 90.58 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016545 0.000000 0.000167 0.00000 SCALE2 0.000000 0.011818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010416 0.00000