HEADER HYDROLASE 29-JAN-16 5HX5 TITLE APOBEC3F CATALYTIC DOMAIN CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA DC->DU-EDITING ENZYME APOBEC-3F; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 185-373; COMPND 5 SYNONYM: APOLIPOPROTEIN B MRNA-EDITING ENZYME CATALYTIC POLYPEPTIDE- COMPND 6 LIKE 3F,A3F; COMPND 7 EC: 3.5.4.-; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APOBEC3F; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS APOBEC3F, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.M.SHABAN,K.SHI,H.AIHARA,R.S.HARRIS REVDAT 3 27-SEP-23 5HX5 1 JRNL REMARK LINK REVDAT 2 08-JUN-16 5HX5 1 JRNL REVDAT 1 18-MAY-16 5HX5 0 JRNL AUTH N.M.SHABAN,K.SHI,M.LI,H.AIHARA,R.S.HARRIS JRNL TITL 1.92 ANGSTROM ZINC-FREE APOBEC3F CATALYTIC DOMAIN CRYSTAL JRNL TITL 2 STRUCTURE. JRNL REF J.MOL.BIOL. V. 428 2307 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 27139641 JRNL DOI 10.1016/J.JMB.2016.04.026 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2313: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 14591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9412 - 5.0157 0.91 2641 155 0.1753 0.1756 REMARK 3 2 5.0157 - 3.9828 0.90 2615 107 0.1697 0.2225 REMARK 3 3 3.9828 - 3.4798 0.85 2468 133 0.2179 0.2847 REMARK 3 4 3.4798 - 3.1619 0.90 2636 127 0.2481 0.2860 REMARK 3 5 3.1619 - 2.9354 0.97 2827 143 0.2478 0.2783 REMARK 3 6 2.9354 - 2.7624 0.98 2814 127 0.2681 0.2972 REMARK 3 7 2.7624 - 2.6241 0.91 2679 136 0.3392 0.4464 REMARK 3 8 2.6241 - 2.5099 0.97 2783 154 0.3275 0.3763 REMARK 3 9 2.5099 - 2.4133 0.96 2815 128 0.3322 0.3927 REMARK 3 10 2.4133 - 2.3300 0.97 2844 140 0.3196 0.3537 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2991 REMARK 3 ANGLE : 0.602 4058 REMARK 3 CHIRALITY : 0.043 398 REMARK 3 PLANARITY : 0.005 521 REMARK 3 DIHEDRAL : 15.916 1714 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.5586 12.0759 44.4631 REMARK 3 T TENSOR REMARK 3 T11: 0.3536 T22: 0.5130 REMARK 3 T33: 0.5651 T12: -0.0670 REMARK 3 T13: -0.0000 T23: -0.1051 REMARK 3 L TENSOR REMARK 3 L11: 0.6895 L22: 1.7430 REMARK 3 L33: 0.6593 L12: -1.0758 REMARK 3 L13: 0.3330 L23: -0.0214 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: -0.1247 S13: 0.6107 REMARK 3 S21: 0.4380 S22: -0.0457 S23: -0.4161 REMARK 3 S31: -0.6788 S32: 0.6460 S33: -0.0058 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3663 11.2590 31.4072 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.4360 REMARK 3 T33: 0.4098 T12: -0.0128 REMARK 3 T13: -0.0691 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.1715 L22: 0.5047 REMARK 3 L33: 0.5613 L12: -0.1529 REMARK 3 L13: 0.2564 L23: 0.3266 REMARK 3 S TENSOR REMARK 3 S11: 0.6030 S12: -0.1641 S13: 0.1648 REMARK 3 S21: -0.1539 S22: -0.3512 S23: -0.2689 REMARK 3 S31: -0.0478 S32: 0.0583 S33: 0.1488 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1160 13.4819 29.1897 REMARK 3 T TENSOR REMARK 3 T11: 0.4312 T22: 0.5015 REMARK 3 T33: 0.3627 T12: -0.0442 REMARK 3 T13: 0.0474 T23: -0.0768 REMARK 3 L TENSOR REMARK 3 L11: 0.9801 L22: 1.7586 REMARK 3 L33: 0.5636 L12: 1.0852 REMARK 3 L13: 0.6043 L23: 0.1970 REMARK 3 S TENSOR REMARK 3 S11: 0.3164 S12: 0.1943 S13: -0.9871 REMARK 3 S21: -0.3517 S22: 0.3093 S23: -1.1517 REMARK 3 S31: -0.3497 S32: 0.0318 S33: 0.0758 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0284 20.3349 26.6967 REMARK 3 T TENSOR REMARK 3 T11: 0.7697 T22: 0.5806 REMARK 3 T33: 0.5242 T12: -0.0884 REMARK 3 T13: 0.0106 T23: 0.1094 REMARK 3 L TENSOR REMARK 3 L11: 1.2599 L22: 0.4082 REMARK 3 L33: 5.4773 L12: -0.0560 REMARK 3 L13: 2.1229 L23: 0.5940 REMARK 3 S TENSOR REMARK 3 S11: 0.5215 S12: 0.5015 S13: 0.5547 REMARK 3 S21: -1.1487 S22: -1.1113 S23: -0.3827 REMARK 3 S31: 0.2557 S32: 1.6108 S33: -0.2489 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 268 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.1254 20.0036 36.7047 REMARK 3 T TENSOR REMARK 3 T11: 0.4787 T22: 0.2586 REMARK 3 T33: 0.2150 T12: 0.0246 REMARK 3 T13: -0.0501 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 1.3918 L22: 1.9138 REMARK 3 L33: 2.4516 L12: -0.0951 REMARK 3 L13: -0.4858 L23: -0.1611 REMARK 3 S TENSOR REMARK 3 S11: 0.0686 S12: -0.0021 S13: 0.0306 REMARK 3 S21: -0.6673 S22: 0.3191 S23: -1.1341 REMARK 3 S31: -0.9548 S32: -0.1308 S33: 0.6457 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6240 18.0126 43.7070 REMARK 3 T TENSOR REMARK 3 T11: 0.4351 T22: 0.3592 REMARK 3 T33: 0.4182 T12: 0.1580 REMARK 3 T13: -0.0666 T23: -0.0880 REMARK 3 L TENSOR REMARK 3 L11: 0.5327 L22: 1.1505 REMARK 3 L33: 1.2989 L12: 0.1499 REMARK 3 L13: -0.7839 L23: -0.1141 REMARK 3 S TENSOR REMARK 3 S11: -0.4154 S12: -0.4710 S13: 0.2905 REMARK 3 S21: -0.0697 S22: 0.2241 S23: 0.1094 REMARK 3 S31: 0.0115 S32: -0.8533 S33: 0.2150 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2580 23.7943 47.3219 REMARK 3 T TENSOR REMARK 3 T11: 0.4430 T22: 0.4624 REMARK 3 T33: 0.5152 T12: -0.0433 REMARK 3 T13: -0.0258 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.1541 L22: 0.3831 REMARK 3 L33: 0.3514 L12: -0.2553 REMARK 3 L13: -0.1738 L23: 0.1166 REMARK 3 S TENSOR REMARK 3 S11: 0.5535 S12: 0.3210 S13: 0.7301 REMARK 3 S21: -0.2294 S22: -0.6415 S23: 0.3169 REMARK 3 S31: -0.8550 S32: -0.1195 S33: 0.0041 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 324 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5891 5.9384 41.7833 REMARK 3 T TENSOR REMARK 3 T11: 0.2775 T22: 0.3989 REMARK 3 T33: 0.6437 T12: 0.0562 REMARK 3 T13: -0.0761 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 2.8550 L22: 0.6272 REMARK 3 L33: 0.5978 L12: -1.3689 REMARK 3 L13: -1.2610 L23: 0.7415 REMARK 3 S TENSOR REMARK 3 S11: -0.6045 S12: 0.0755 S13: -0.6722 REMARK 3 S21: 0.3002 S22: 0.0116 S23: 0.6474 REMARK 3 S31: -0.0263 S32: 0.1839 S33: -0.4325 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.2007 0.3497 43.1450 REMARK 3 T TENSOR REMARK 3 T11: 0.2407 T22: 0.4271 REMARK 3 T33: 0.3082 T12: 0.0637 REMARK 3 T13: -0.0471 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.2086 L22: 1.3669 REMARK 3 L33: 0.5953 L12: 0.5242 REMARK 3 L13: 0.2874 L23: 0.3567 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: 0.2089 S13: 0.3017 REMARK 3 S21: 0.3017 S22: 0.3352 S23: -0.2000 REMARK 3 S31: 0.8857 S32: -0.2781 S33: 0.2911 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 357 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2036 10.9634 54.4894 REMARK 3 T TENSOR REMARK 3 T11: 0.3913 T22: 0.3472 REMARK 3 T33: 0.3897 T12: 0.0387 REMARK 3 T13: 0.0078 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.6494 L22: 1.5898 REMARK 3 L33: 0.2119 L12: -1.2413 REMARK 3 L13: 0.6824 L23: -0.4238 REMARK 3 S TENSOR REMARK 3 S11: -0.7265 S12: -0.9452 S13: -1.4112 REMARK 3 S21: 0.7730 S22: 0.7537 S23: 1.1005 REMARK 3 S31: -0.4784 S32: -0.2382 S33: -0.0103 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 190 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.0936 -5.0402 14.5632 REMARK 3 T TENSOR REMARK 3 T11: 0.5840 T22: 1.2405 REMARK 3 T33: 0.7238 T12: 0.0170 REMARK 3 T13: -0.0035 T23: 0.2204 REMARK 3 L TENSOR REMARK 3 L11: 0.0913 L22: 0.6091 REMARK 3 L33: 3.4986 L12: -0.0942 REMARK 3 L13: -0.5548 L23: 0.0289 REMARK 3 S TENSOR REMARK 3 S11: -0.1609 S12: -0.6619 S13: -0.0884 REMARK 3 S21: -0.1034 S22: -1.0447 S23: -0.7845 REMARK 3 S31: -1.2707 S32: 1.5516 S33: -0.0784 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 217 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4717 -3.9595 24.0151 REMARK 3 T TENSOR REMARK 3 T11: 0.6264 T22: 0.5755 REMARK 3 T33: 0.5368 T12: 0.0375 REMARK 3 T13: 0.0945 T23: -0.1353 REMARK 3 L TENSOR REMARK 3 L11: 0.2888 L22: 0.8174 REMARK 3 L33: 0.6045 L12: -0.3905 REMARK 3 L13: 0.3558 L23: 0.0686 REMARK 3 S TENSOR REMARK 3 S11: 0.4491 S12: 0.6336 S13: 0.4088 REMARK 3 S21: -0.3043 S22: -0.2050 S23: 0.3060 REMARK 3 S31: -0.1253 S32: -0.2157 S33: -0.0120 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 232 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6290 -12.4116 21.3904 REMARK 3 T TENSOR REMARK 3 T11: 0.7168 T22: 0.3159 REMARK 3 T33: 0.4087 T12: 0.0496 REMARK 3 T13: -0.1042 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.0251 L22: 1.0040 REMARK 3 L33: 1.1031 L12: 0.2180 REMARK 3 L13: 0.2432 L23: 1.1408 REMARK 3 S TENSOR REMARK 3 S11: 0.4266 S12: 0.1167 S13: -0.4437 REMARK 3 S21: 1.1089 S22: -0.2384 S23: 0.0402 REMARK 3 S31: 0.7345 S32: -0.3378 S33: 0.0046 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 262 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2026 -13.1074 15.6834 REMARK 3 T TENSOR REMARK 3 T11: 0.2532 T22: 0.4392 REMARK 3 T33: 0.4570 T12: 0.0072 REMARK 3 T13: 0.0814 T23: -0.1006 REMARK 3 L TENSOR REMARK 3 L11: 1.0092 L22: 1.6189 REMARK 3 L33: 1.3233 L12: 0.3133 REMARK 3 L13: 1.0219 L23: -0.6084 REMARK 3 S TENSOR REMARK 3 S11: 0.1409 S12: -0.4695 S13: 0.1363 REMARK 3 S21: -0.0617 S22: -0.4604 S23: 0.1802 REMARK 3 S31: 0.2260 S32: 0.0859 S33: -0.2944 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 293 THROUGH 323 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7597 -14.0669 5.4801 REMARK 3 T TENSOR REMARK 3 T11: 0.6564 T22: 0.2595 REMARK 3 T33: 0.2851 T12: 0.1417 REMARK 3 T13: 0.0878 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 4.5252 L22: 1.9895 REMARK 3 L33: 0.9182 L12: -0.7438 REMARK 3 L13: 0.5640 L23: -0.4340 REMARK 3 S TENSOR REMARK 3 S11: -0.0926 S12: -0.5985 S13: 0.0884 REMARK 3 S21: -0.8368 S22: 0.1280 S23: 0.0882 REMARK 3 S31: 0.6272 S32: -0.0130 S33: 2.1181 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 324 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.5967 -0.0227 10.1644 REMARK 3 T TENSOR REMARK 3 T11: 0.5255 T22: 0.3767 REMARK 3 T33: 0.4352 T12: -0.0572 REMARK 3 T13: -0.0058 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.5321 L22: 0.5497 REMARK 3 L33: 1.2726 L12: 0.6310 REMARK 3 L13: -0.1692 L23: 0.4067 REMARK 3 S TENSOR REMARK 3 S11: 0.2202 S12: 0.1444 S13: 0.8995 REMARK 3 S21: -0.1047 S22: -0.4249 S23: 0.6627 REMARK 3 S31: -0.5088 S32: -0.1851 S33: -0.0427 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 343 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2085 -0.0422 3.9807 REMARK 3 T TENSOR REMARK 3 T11: 1.1162 T22: 0.4313 REMARK 3 T33: 0.1845 T12: -0.3951 REMARK 3 T13: 0.0567 T23: 0.2066 REMARK 3 L TENSOR REMARK 3 L11: 1.2794 L22: 2.4823 REMARK 3 L33: 1.6946 L12: 0.0437 REMARK 3 L13: -0.8234 L23: -0.0526 REMARK 3 S TENSOR REMARK 3 S11: 0.5161 S12: 0.1062 S13: -0.6013 REMARK 3 S21: -0.9109 S22: -0.7127 S23: -0.5639 REMARK 3 S31: -1.0862 S32: 0.9435 S33: -0.5554 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HX5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15324 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 35.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.11730 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IOU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, MGCL2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.45000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 175 REMARK 465 PRO A 176 REMARK 465 LEU A 177 REMARK 465 GLY A 178 REMARK 465 SER A 179 REMARK 465 PRO A 180 REMARK 465 GLY A 181 REMARK 465 ILE A 182 REMARK 465 PRO A 183 REMARK 465 GLY A 184 REMARK 465 LYS A 185 REMARK 465 GLU A 186 REMARK 465 ILE A 187 REMARK 465 LEU A 188 REMARK 465 ARG A 189 REMARK 465 HIS A 228 REMARK 465 SER A 229 REMARK 465 PRO A 230 REMARK 465 GLN A 241 REMARK 465 VAL A 242 REMARK 465 ASP A 243 REMARK 465 PRO A 244 REMARK 465 GLU A 245 REMARK 465 THR A 246 REMARK 465 GLY A 247 REMARK 465 GLY B 175 REMARK 465 PRO B 176 REMARK 465 LEU B 177 REMARK 465 GLY B 178 REMARK 465 SER B 179 REMARK 465 PRO B 180 REMARK 465 GLY B 181 REMARK 465 ILE B 182 REMARK 465 PRO B 183 REMARK 465 GLY B 184 REMARK 465 LYS B 185 REMARK 465 GLU B 186 REMARK 465 ILE B 187 REMARK 465 LEU B 188 REMARK 465 ARG B 189 REMARK 465 LEU B 207 REMARK 465 ARG B 208 REMARK 465 LYS B 209 REMARK 465 ALA B 210 REMARK 465 TYR B 211 REMARK 465 GLY B 212 REMARK 465 ARG B 213 REMARK 465 ASN B 214 REMARK 465 GLU B 215 REMARK 465 GLN B 241 REMARK 465 VAL B 242 REMARK 465 ASP B 243 REMARK 465 PRO B 244 REMARK 465 GLU B 245 REMARK 465 THR B 246 REMARK 465 GLY B 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 307 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TYR B 307 CB CG CD1 CD2 CE1 CE2 CZ REMARK 480 TYR B 307 OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE B 309 O HOH B 501 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 206 30.42 -95.30 REMARK 500 LEU A 306 -158.39 -88.38 REMARK 500 TYR B 308 63.17 60.81 REMARK 500 ASP B 310 -15.76 80.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 249 ND1 REMARK 620 2 CYS A 280 SG 110.6 REMARK 620 3 CYS A 283 SG 99.8 107.3 REMARK 620 4 HOH A 517 O 103.4 113.5 121.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 249 ND1 REMARK 620 2 CYS B 280 SG 116.6 REMARK 620 3 CYS B 283 SG 104.3 86.0 REMARK 620 4 HOH B 522 O 96.3 122.5 131.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HX4 RELATED DB: PDB DBREF 5HX5 A 185 373 UNP Q8IUX4 ABC3F_HUMAN 185 373 DBREF 5HX5 B 185 373 UNP Q8IUX4 ABC3F_HUMAN 185 373 SEQADV 5HX5 GLY A 175 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO A 176 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 LEU A 177 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY A 178 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 SER A 179 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO A 180 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY A 181 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 ILE A 182 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO A 183 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY A 184 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 ASP A 196 UNP Q8IUX4 TYR 196 ENGINEERED MUTATION SEQADV 5HX5 GLY A 247 UNP Q8IUX4 HIS 247 ENGINEERED MUTATION SEQADV 5HX5 ARG A 248 UNP Q8IUX4 CYS 248 ENGINEERED MUTATION SEQADV 5HX5 ALA A 259 UNP Q8IUX4 CYS 259 ENGINEERED MUTATION SEQADV 5HX5 LYS A 302 UNP Q8IUX4 PHE 302 ENGINEERED MUTATION SEQADV 5HX5 ASP A 310 UNP Q8IUX4 TRP 310 ENGINEERED MUTATION SEQADV 5HX5 ASP A 355 UNP Q8IUX4 LYS 355 ENGINEERED MUTATION SEQADV 5HX5 ASP A 358 UNP Q8IUX4 LYS 358 ENGINEERED MUTATION SEQADV 5HX5 ASP A 363 UNP Q8IUX4 PHE 363 ENGINEERED MUTATION SEQADV 5HX5 GLY B 175 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO B 176 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 LEU B 177 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY B 178 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 SER B 179 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO B 180 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY B 181 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 ILE B 182 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 PRO B 183 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 GLY B 184 UNP Q8IUX4 EXPRESSION TAG SEQADV 5HX5 ASP B 196 UNP Q8IUX4 TYR 196 ENGINEERED MUTATION SEQADV 5HX5 GLY B 247 UNP Q8IUX4 HIS 247 ENGINEERED MUTATION SEQADV 5HX5 ARG B 248 UNP Q8IUX4 CYS 248 ENGINEERED MUTATION SEQADV 5HX5 ALA B 259 UNP Q8IUX4 CYS 259 ENGINEERED MUTATION SEQADV 5HX5 LYS B 302 UNP Q8IUX4 PHE 302 ENGINEERED MUTATION SEQADV 5HX5 ASP B 310 UNP Q8IUX4 TRP 310 ENGINEERED MUTATION SEQADV 5HX5 ASP B 355 UNP Q8IUX4 LYS 355 ENGINEERED MUTATION SEQADV 5HX5 ASP B 358 UNP Q8IUX4 LYS 358 ENGINEERED MUTATION SEQADV 5HX5 ASP B 363 UNP Q8IUX4 PHE 363 ENGINEERED MUTATION SEQRES 1 A 199 GLY PRO LEU GLY SER PRO GLY ILE PRO GLY LYS GLU ILE SEQRES 2 A 199 LEU ARG ASN PRO MET GLU ALA MET ASP PRO HIS ILE PHE SEQRES 3 A 199 TYR PHE HIS PHE LYS ASN LEU ARG LYS ALA TYR GLY ARG SEQRES 4 A 199 ASN GLU SER TRP LEU CYS PHE THR MET GLU VAL VAL LYS SEQRES 5 A 199 HIS HIS SER PRO VAL SER TRP LYS ARG GLY VAL PHE ARG SEQRES 6 A 199 ASN GLN VAL ASP PRO GLU THR GLY ARG HIS ALA GLU ARG SEQRES 7 A 199 CYS PHE LEU SER TRP PHE ALA ASP ASP ILE LEU SER PRO SEQRES 8 A 199 ASN THR ASN TYR GLU VAL THR TRP TYR THR SER TRP SER SEQRES 9 A 199 PRO CYS PRO GLU CYS ALA GLY GLU VAL ALA GLU PHE LEU SEQRES 10 A 199 ALA ARG HIS SER ASN VAL ASN LEU THR ILE LYS THR ALA SEQRES 11 A 199 ARG LEU TYR TYR PHE ASP ASP THR ASP TYR GLN GLU GLY SEQRES 12 A 199 LEU ARG SER LEU SER GLN GLU GLY ALA SER VAL GLU ILE SEQRES 13 A 199 MET GLY TYR LYS ASP PHE LYS TYR CYS TRP GLU ASN PHE SEQRES 14 A 199 VAL TYR ASN ASP ASP GLU PRO PHE LYS PRO TRP ASP GLY SEQRES 15 A 199 LEU ASP TYR ASN PHE LEU ASP LEU ASP SER LYS LEU GLN SEQRES 16 A 199 GLU ILE LEU GLU SEQRES 1 B 199 GLY PRO LEU GLY SER PRO GLY ILE PRO GLY LYS GLU ILE SEQRES 2 B 199 LEU ARG ASN PRO MET GLU ALA MET ASP PRO HIS ILE PHE SEQRES 3 B 199 TYR PHE HIS PHE LYS ASN LEU ARG LYS ALA TYR GLY ARG SEQRES 4 B 199 ASN GLU SER TRP LEU CYS PHE THR MET GLU VAL VAL LYS SEQRES 5 B 199 HIS HIS SER PRO VAL SER TRP LYS ARG GLY VAL PHE ARG SEQRES 6 B 199 ASN GLN VAL ASP PRO GLU THR GLY ARG HIS ALA GLU ARG SEQRES 7 B 199 CYS PHE LEU SER TRP PHE ALA ASP ASP ILE LEU SER PRO SEQRES 8 B 199 ASN THR ASN TYR GLU VAL THR TRP TYR THR SER TRP SER SEQRES 9 B 199 PRO CYS PRO GLU CYS ALA GLY GLU VAL ALA GLU PHE LEU SEQRES 10 B 199 ALA ARG HIS SER ASN VAL ASN LEU THR ILE LYS THR ALA SEQRES 11 B 199 ARG LEU TYR TYR PHE ASP ASP THR ASP TYR GLN GLU GLY SEQRES 12 B 199 LEU ARG SER LEU SER GLN GLU GLY ALA SER VAL GLU ILE SEQRES 13 B 199 MET GLY TYR LYS ASP PHE LYS TYR CYS TRP GLU ASN PHE SEQRES 14 B 199 VAL TYR ASN ASP ASP GLU PRO PHE LYS PRO TRP ASP GLY SEQRES 15 B 199 LEU ASP TYR ASN PHE LEU ASP LEU ASP SER LYS LEU GLN SEQRES 16 B 199 GLU ILE LEU GLU HET ZN A 401 1 HET ZN B 401 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *61(H2 O) HELIX 1 AA1 ASP A 196 LYS A 205 1 10 HELIX 2 AA2 ARG A 208 ARG A 213 5 6 HELIX 3 AA3 HIS A 249 ILE A 262 1 14 HELIX 4 AA4 CYS A 280 ARG A 293 1 14 HELIX 5 AA5 ASP A 311 GLU A 324 1 14 HELIX 6 AA6 GLY A 332 PHE A 343 1 12 HELIX 7 AA7 GLY A 356 GLU A 373 1 18 HELIX 8 AA8 ASP B 196 LYS B 205 1 10 HELIX 9 AA9 HIS B 249 ILE B 262 1 14 HELIX 10 AB1 CYS B 280 ARG B 293 1 14 HELIX 11 AB2 ASP B 311 GLU B 324 1 14 HELIX 12 AB3 GLY B 332 PHE B 343 1 12 HELIX 13 AB4 GLY B 356 GLU B 373 1 18 SHEET 1 AA1 5 SER A 232 ARG A 239 0 SHEET 2 AA1 5 TRP A 217 VAL A 225 -1 N MET A 222 O LYS A 234 SHEET 3 AA1 5 ASN A 268 TRP A 277 -1 O TYR A 274 N CYS A 219 SHEET 4 AA1 5 VAL A 297 ARG A 305 1 O THR A 300 N TRP A 273 SHEET 5 AA1 5 SER A 327 ILE A 330 1 O SER A 327 N ILE A 301 SHEET 1 AA2 5 SER B 232 ARG B 239 0 SHEET 2 AA2 5 TRP B 217 LYS B 226 -1 N MET B 222 O LYS B 234 SHEET 3 AA2 5 THR B 267 THR B 275 -1 O ASN B 268 N VAL B 225 SHEET 4 AA2 5 VAL B 297 THR B 303 1 O ASN B 298 N VAL B 271 SHEET 5 AA2 5 SER B 327 ILE B 330 1 O SER B 327 N ILE B 301 LINK ND1 HIS A 249 ZN ZN A 401 1555 1555 2.05 LINK SG CYS A 280 ZN ZN A 401 1555 1555 2.34 LINK SG CYS A 283 ZN ZN A 401 1555 1555 2.28 LINK ZN ZN A 401 O HOH A 517 1555 1555 2.47 LINK ND1 HIS B 249 ZN ZN B 401 1555 1555 2.03 LINK SG CYS B 280 ZN ZN B 401 1555 1555 2.33 LINK SG CYS B 283 ZN ZN B 401 1555 1555 2.35 LINK ZN ZN B 401 O HOH B 522 1555 1555 2.47 CISPEP 1 ASN B 190 PRO B 191 0 -3.84 SITE 1 AC1 4 HIS A 249 CYS A 280 CYS A 283 HOH A 517 SITE 1 AC2 4 HIS B 249 CYS B 280 CYS B 283 HOH B 522 CRYST1 35.940 50.900 100.860 90.00 90.75 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027824 0.000000 0.000364 0.00000 SCALE2 0.000000 0.019646 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009916 0.00000