HEADER TRANSFERASE 31-JAN-16 5HXQ TITLE CRYSTAL STRUCTURE OF Z,Z-FARNESYL DIPHOSPHATE SYNTHASE (D71M, E75A AND TITLE 2 H103Y MUTANTS) COMPLEXED WITH DMSPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: (2Z,6Z)-FARNESYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 72-303; COMPND 5 SYNONYM: Z,Z-FPP SYNTHASE,Z-FARNESYL PYROPHOSPHATE SYNTHASE; COMPND 6 EC: 2.5.1.92; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM HABROCHAITES; SOURCE 3 ORGANISM_COMMON: WILD TOMATO; SOURCE 4 ORGANISM_TAXID: 62890; SOURCE 5 GENE: ZFPS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-32 XA/LIC KEYWDS PRENYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.C.LEE,Y.T.CHAN,A.H.J.WANG REVDAT 3 08-NOV-23 5HXQ 1 HETSYN REVDAT 2 16-OCT-19 5HXQ 1 COMPND JRNL FORMUL REVDAT 1 05-APR-17 5HXQ 0 JRNL AUTH Y.T.CHAN,T.P.KO,S.H.YAO,Y.W.CHEN,C.C.LEE,A.H.J.WANG JRNL TITL CRYSTAL STRUCTURE AND POTENTIAL HEAD-TO-MIDDLE CONDENSATION JRNL TITL 2 FUNCTION OF A Z,Z-FARNESYL DIPHOSPHATE SYNTHASE JRNL REF ACS OMEGA V. 2 930 2017 JRNL REFN ESSN 2470-1343 JRNL DOI 10.1021/ACSOMEGA.6B00562 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 3 NUMBER OF REFLECTIONS : 31779 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1679 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1273 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 48.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3639 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 347 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46000 REMARK 3 B22 (A**2) : 1.26000 REMARK 3 B33 (A**2) : -0.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.205 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.168 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3763 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3652 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5053 ; 1.246 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8425 ; 1.129 ; 3.011 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 5.529 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;36.174 ;24.722 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 703 ;14.870 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;13.638 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 549 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4162 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 856 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1798 ; 1.479 ; 2.830 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1797 ; 1.477 ; 2.828 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2244 ; 2.466 ; 4.234 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2245 ; 2.467 ; 4.236 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1965 ; 1.844 ; 3.189 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1966 ; 1.844 ; 3.190 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2810 ; 3.085 ; 4.635 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4508 ; 5.844 ;23.422 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4383 ; 5.561 ;23.005 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HXQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38064 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5HXN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 10K, 20MM 18-CROWN-6, 0.1M REMARK 280 MES, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.87600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.36300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.36300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.87600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 71 REMARK 465 LEU A 72 REMARK 465 ASP A 73 REMARK 465 GLU A 74 REMARK 465 ALA A 75 REMARK 465 GLY A 299 REMARK 465 GLY A 300 REMARK 465 HIS A 301 REMARK 465 THR A 302 REMARK 465 TYR A 303 REMARK 465 PHE C 298 REMARK 465 GLY C 299 REMARK 465 GLY C 300 REMARK 465 HIS C 301 REMARK 465 THR C 302 REMARK 465 TYR C 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 601 O HOH C 522 1.14 REMARK 500 O HOH C 530 O HOH C 596 1.32 REMARK 500 O HOH C 526 O HOH C 633 1.96 REMARK 500 O HOH C 615 O HOH C 617 1.99 REMARK 500 O HOH A 646 O HOH A 695 2.11 REMARK 500 NE2 GLN C 293 O HOH C 501 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 700 O HOH C 513 4545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 254 68.98 -109.83 REMARK 500 PHE A 259 -136.39 -87.13 REMARK 500 GLN C 254 54.96 -114.49 REMARK 500 PHE C 259 -133.42 -83.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 772 DISTANCE = 6.40 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DST A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue O4B C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue O4B C 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HXN RELATED DB: PDB REMARK 900 RELATED ID: 5HXO RELATED DB: PDB REMARK 900 RELATED ID: 5HXP RELATED DB: PDB REMARK 900 RELATED ID: 5HXT RELATED DB: PDB DBREF 5HXQ A 72 303 UNP B8XA40 ZFPS_SOLHA 72 303 DBREF 5HXQ C 72 303 UNP B8XA40 ZFPS_SOLHA 72 303 SEQADV 5HXQ MET A 71 UNP B8XA40 INITIATING METHIONINE SEQADV 5HXQ ALA A 75 UNP B8XA40 GLU 75 ENGINEERED MUTATION SEQADV 5HXQ TYR A 103 UNP B8XA40 HIS 103 ENGINEERED MUTATION SEQADV 5HXQ MET C 71 UNP B8XA40 INITIATING METHIONINE SEQADV 5HXQ ALA C 75 UNP B8XA40 GLU 75 ENGINEERED MUTATION SEQADV 5HXQ TYR C 103 UNP B8XA40 HIS 103 ENGINEERED MUTATION SEQRES 1 A 233 MET LEU ASP GLU ALA LEU MET PRO LYS HIS ILE ALA LEU SEQRES 2 A 233 ILE MET ASP GLY ASN ARG ARG TRP ALA LYS ASP LYS GLY SEQRES 3 A 233 LEU ASP VAL SER GLU GLY TYR LYS HIS LEU PHE PRO LYS SEQRES 4 A 233 LEU LYS GLU ILE CYS ASP ILE SER SER LYS LEU GLY ILE SEQRES 5 A 233 GLN VAL ILE THR ALA PHE ALA PHE SER THR GLU ASN TRP SEQRES 6 A 233 LYS ARG ALA LYS GLY GLU VAL ASP PHE LEU MET GLN MET SEQRES 7 A 233 PHE GLU GLU LEU TYR ASP GLU PHE SER ARG SER GLY VAL SEQRES 8 A 233 ARG VAL SER ILE ILE GLY CYS LYS THR ASP LEU PRO MET SEQRES 9 A 233 THR LEU GLN LYS CYS ILE ALA LEU THR GLU GLU THR THR SEQRES 10 A 233 LYS GLY ASN LYS GLY LEU HIS LEU VAL ILE ALA LEU ASN SEQRES 11 A 233 TYR GLY GLY TYR TYR ASP ILE LEU GLN ALA THR LYS SER SEQRES 12 A 233 ILE VAL ASN LYS ALA MET ASN GLY LEU LEU ASP VAL GLU SEQRES 13 A 233 ASP ILE ASN LYS ASN LEU PHE ASP GLN GLU LEU GLU SER SEQRES 14 A 233 LYS CYS PRO ASN PRO ASP LEU LEU ILE ARG THR GLY GLY SEQRES 15 A 233 ASP GLN ARG VAL SER ASN PHE LEU LEU TRP GLN LEU ALA SEQRES 16 A 233 TYR THR GLU PHE TYR PHE THR LYS THR LEU PHE PRO ASP SEQRES 17 A 233 PHE GLY GLU GLU ASP LEU LYS GLU ALA ILE ILE ASN PHE SEQRES 18 A 233 GLN GLN ARG HIS ARG ARG PHE GLY GLY HIS THR TYR SEQRES 1 C 233 MET LEU ASP GLU ALA LEU MET PRO LYS HIS ILE ALA LEU SEQRES 2 C 233 ILE MET ASP GLY ASN ARG ARG TRP ALA LYS ASP LYS GLY SEQRES 3 C 233 LEU ASP VAL SER GLU GLY TYR LYS HIS LEU PHE PRO LYS SEQRES 4 C 233 LEU LYS GLU ILE CYS ASP ILE SER SER LYS LEU GLY ILE SEQRES 5 C 233 GLN VAL ILE THR ALA PHE ALA PHE SER THR GLU ASN TRP SEQRES 6 C 233 LYS ARG ALA LYS GLY GLU VAL ASP PHE LEU MET GLN MET SEQRES 7 C 233 PHE GLU GLU LEU TYR ASP GLU PHE SER ARG SER GLY VAL SEQRES 8 C 233 ARG VAL SER ILE ILE GLY CYS LYS THR ASP LEU PRO MET SEQRES 9 C 233 THR LEU GLN LYS CYS ILE ALA LEU THR GLU GLU THR THR SEQRES 10 C 233 LYS GLY ASN LYS GLY LEU HIS LEU VAL ILE ALA LEU ASN SEQRES 11 C 233 TYR GLY GLY TYR TYR ASP ILE LEU GLN ALA THR LYS SER SEQRES 12 C 233 ILE VAL ASN LYS ALA MET ASN GLY LEU LEU ASP VAL GLU SEQRES 13 C 233 ASP ILE ASN LYS ASN LEU PHE ASP GLN GLU LEU GLU SER SEQRES 14 C 233 LYS CYS PRO ASN PRO ASP LEU LEU ILE ARG THR GLY GLY SEQRES 15 C 233 ASP GLN ARG VAL SER ASN PHE LEU LEU TRP GLN LEU ALA SEQRES 16 C 233 TYR THR GLU PHE TYR PHE THR LYS THR LEU PHE PRO ASP SEQRES 17 C 233 PHE GLY GLU GLU ASP LEU LYS GLU ALA ILE ILE ASN PHE SEQRES 18 C 233 GLN GLN ARG HIS ARG ARG PHE GLY GLY HIS THR TYR HET DST A 501 14 HET O4B C 401 18 HET O4B C 402 18 HETNAM DST DIMETHYLALLYL S-THIOLODIPHOSPHATE HETNAM O4B 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE HETSYN DST DMASPP; DMAPP; DMADP; DIMETHYLALLYL PYROPHOSPHATE; HETSYN 2 DST DIMETHYLALLYL DIPHOSPHATE; ISOPRENYL PYROPHOSPHATE FORMUL 3 DST C5 H12 O6 P2 S FORMUL 4 O4B 2(C12 H24 O6) FORMUL 6 HOH *347(H2 O) HELIX 1 AA1 GLY A 87 GLY A 96 1 10 HELIX 2 AA2 ASP A 98 LYS A 104 1 7 HELIX 3 AA3 HIS A 105 LEU A 120 1 16 HELIX 4 AA4 GLU A 133 ARG A 137 5 5 HELIX 5 AA5 ALA A 138 GLU A 150 1 13 HELIX 6 AA6 GLU A 151 SER A 157 1 7 HELIX 7 AA7 CYS A 168 LEU A 172 5 5 HELIX 8 AA8 PRO A 173 LYS A 188 1 16 HELIX 9 AA9 GLY A 202 ASN A 220 1 19 HELIX 10 AB1 ASP A 224 ILE A 228 5 5 HELIX 11 AB2 ASN A 229 LEU A 237 1 9 HELIX 12 AB3 LEU A 275 PHE A 279 5 5 HELIX 13 AB4 GLY A 280 PHE A 298 1 19 HELIX 14 AB5 ASP C 73 MET C 77 5 5 HELIX 15 AB6 GLY C 87 LYS C 95 1 9 HELIX 16 AB7 ASP C 98 LYS C 104 1 7 HELIX 17 AB8 HIS C 105 GLY C 121 1 17 HELIX 18 AB9 GLU C 133 ARG C 137 5 5 HELIX 19 AC1 ALA C 138 PHE C 149 1 12 HELIX 20 AC2 GLU C 151 SER C 157 1 7 HELIX 21 AC3 CYS C 168 LEU C 172 5 5 HELIX 22 AC4 PRO C 173 LYS C 188 1 16 HELIX 23 AC5 GLY C 202 ASN C 220 1 19 HELIX 24 AC6 ASP C 224 ILE C 228 5 5 HELIX 25 AC7 ASN C 229 LEU C 237 1 9 HELIX 26 AC8 LEU C 261 ALA C 265 5 5 HELIX 27 AC9 LEU C 275 PHE C 279 5 5 HELIX 28 AD1 GLY C 280 ARG C 294 1 15 SHEET 1 AA1 6 ARG A 162 ILE A 166 0 SHEET 2 AA1 6 HIS A 194 TYR A 201 1 O ILE A 197 N SER A 164 SHEET 3 AA1 6 VAL A 124 SER A 131 1 N ILE A 125 O VAL A 196 SHEET 4 AA1 6 HIS A 80 ILE A 84 1 N LEU A 83 O PHE A 128 SHEET 5 AA1 6 LEU A 246 ARG A 249 1 O LEU A 246 N ALA A 82 SHEET 6 AA1 6 GLU A 268 PHE A 271 1 O GLU A 268 N LEU A 247 SHEET 1 AA2 6 ARG C 162 ILE C 166 0 SHEET 2 AA2 6 HIS C 194 TYR C 201 1 O ILE C 197 N SER C 164 SHEET 3 AA2 6 VAL C 124 SER C 131 1 N ALA C 127 O ALA C 198 SHEET 4 AA2 6 HIS C 80 ILE C 84 1 N LEU C 83 O THR C 126 SHEET 5 AA2 6 LEU C 246 ARG C 249 1 O ILE C 248 N ILE C 84 SHEET 6 AA2 6 GLU C 268 PHE C 271 1 O TYR C 270 N LEU C 247 CISPEP 1 CYS A 241 PRO A 242 0 -0.44 CISPEP 2 CYS C 241 PRO C 242 0 -5.70 SITE 1 AC1 12 MET A 85 PHE A 128 SER A 131 GLU A 133 SITE 2 AC1 12 ASN A 134 ARG A 137 ARG A 249 SER A 257 SITE 3 AC1 12 HOH A 607 HOH A 618 HOH A 629 ARG C 296 SITE 1 AC2 5 GLU A 226 ILE A 228 LEU C 208 GLN C 209 SITE 2 AC2 5 LYS C 212 SITE 1 AC3 5 TYR A 153 LEU A 182 MET C 174 GLN C 177 SITE 2 AC3 5 LYS C 178 CRYST1 59.752 66.800 128.726 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016736 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007768 0.00000