HEADER HYDROLASE 01-FEB-16 5HY2 TITLE STRUCTURE-FUNCTION ANALYSIS OF FUNCTIONALLY DIVERSE MEMBERS OF THE TITLE 2 CYCLIC AMIDE HYDROLASE FAMILY OF TOBLERONE FOLD ENZYMES COMPND MOL_ID: 1; COMPND 2 MOLECULE: RING-OPENING AMIDOHYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANKIA SP. EUL1B; SOURCE 3 ORGANISM_TAXID: 985774; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET14B VARIANT KEYWDS TOBLERONE FOLD, PYRIMIDINE CATABOLISM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.S.PEAT,S.BALOTRA,M.WILDING,J.NEWMAN,C.SCOTT REVDAT 4 27-SEP-23 5HY2 1 REMARK REVDAT 3 26-APR-17 5HY2 1 JRNL REVDAT 2 15-MAR-17 5HY2 1 JRNL REVDAT 1 01-FEB-17 5HY2 0 JRNL AUTH T.S.PEAT,S.BALOTRA,M.WILDING,C.J.HARTLEY,J.NEWMAN,C.SCOTT JRNL TITL HIGH-RESOLUTION X-RAY STRUCTURES OF TWO FUNCTIONALLY JRNL TITL 2 DISTINCT MEMBERS OF THE CYCLIC AMIDE HYDROLASE FAMILY OF JRNL TITL 3 TOBLERONE FOLD ENZYMES. JRNL REF APPL. ENVIRON. MICROBIOL. V. 83 2017 JRNL REFN ESSN 1098-5336 JRNL PMID 28235873 JRNL DOI 10.1128/AEM.03365-16 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1354 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1875 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 125 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4719 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.94000 REMARK 3 B22 (A**2) : 4.35000 REMARK 3 B33 (A**2) : -3.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.97000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.440 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.273 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.223 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.081 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4835 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4683 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6598 ; 1.259 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10732 ; 1.474 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 665 ; 5.841 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;31.997 ;23.793 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 699 ;15.888 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;20.962 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 793 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5605 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1015 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2675 ; 4.590 ; 5.373 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2674 ; 4.587 ; 5.371 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3335 ; 7.203 ; 8.026 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3336 ; 7.203 ; 8.028 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2160 ; 4.644 ; 5.701 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2161 ; 4.643 ; 5.703 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3264 ; 7.241 ; 8.424 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 20195 ;11.564 ;50.012 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 20195 ;11.565 ;50.015 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 14 390 B 14 390 36002 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97070 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27567 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 46.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5HY0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS AT 2.7 MG/ML WITH ADDED REMARK 280 ATRAZINE; RESERVOIR WAS 22% PEG 3350, 86 MM SODIUM ACETATE; REMARK 280 DROPS WERE 150 NL PROTEIN PLUS 140 NL RESERVOIR PLUS 10 NL REMARK 280 MICROSEEDS., PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.07147 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.47707 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.07147 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 66.47707 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASN A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 SER A 9 REMARK 465 PRO A 10 REMARK 465 ARG A 11 REMARK 465 SER A 12 REMARK 465 SER A 182 REMARK 465 SER A 183 REMARK 465 ARG A 184 REMARK 465 ALA A 185 REMARK 465 VAL A 186 REMARK 465 ALA A 187 REMARK 465 ASP A 188 REMARK 465 ALA A 189 REMARK 465 LEU A 190 REMARK 465 SER A 191 REMARK 465 ARG A 192 REMARK 465 GLY A 193 REMARK 465 LYS A 194 REMARK 465 THR A 195 REMARK 465 VAL A 196 REMARK 465 VAL A 197 REMARK 465 THR A 198 REMARK 465 GLY A 199 REMARK 465 ASP A 200 REMARK 465 TYR A 201 REMARK 465 GLY A 202 REMARK 465 ILE A 203 REMARK 465 GLY A 204 REMARK 465 PRO A 205 REMARK 465 MET A 206 REMARK 465 GLY A 207 REMARK 465 SER A 208 REMARK 465 MET A 209 REMARK 465 VAL A 232 REMARK 465 ALA A 233 REMARK 465 ASP A 234 REMARK 465 ASP A 235 REMARK 465 ARG A 236 REMARK 465 ILE A 237 REMARK 465 ARG A 238 REMARK 465 SER A 239 REMARK 465 ASP A 240 REMARK 465 TRP A 241 REMARK 465 ASP A 242 REMARK 465 HIS A 372 REMARK 465 MET A 373 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ASN B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 LEU B 8 REMARK 465 SER B 9 REMARK 465 PRO B 10 REMARK 465 ARG B 11 REMARK 465 SER B 12 REMARK 465 ALA B 13 REMARK 465 SER B 182 REMARK 465 SER B 183 REMARK 465 ARG B 184 REMARK 465 ALA B 185 REMARK 465 VAL B 186 REMARK 465 ALA B 187 REMARK 465 ASP B 188 REMARK 465 ALA B 189 REMARK 465 LEU B 190 REMARK 465 SER B 191 REMARK 465 ARG B 192 REMARK 465 GLY B 193 REMARK 465 LYS B 194 REMARK 465 THR B 195 REMARK 465 VAL B 196 REMARK 465 VAL B 197 REMARK 465 THR B 198 REMARK 465 GLY B 199 REMARK 465 ASP B 200 REMARK 465 TYR B 201 REMARK 465 GLY B 202 REMARK 465 ILE B 203 REMARK 465 GLY B 204 REMARK 465 PRO B 205 REMARK 465 MET B 206 REMARK 465 GLY B 207 REMARK 465 SER B 208 REMARK 465 MET B 209 REMARK 465 ASP B 230 REMARK 465 LEU B 231 REMARK 465 VAL B 232 REMARK 465 ALA B 233 REMARK 465 ASP B 234 REMARK 465 ASP B 235 REMARK 465 ARG B 236 REMARK 465 ILE B 237 REMARK 465 ARG B 238 REMARK 465 SER B 239 REMARK 465 ASP B 240 REMARK 465 TRP B 241 REMARK 465 ASP B 242 REMARK 465 SER B 371 REMARK 465 HIS B 372 REMARK 465 MET B 373 REMARK 465 GLY B 374 REMARK 465 PRO B 375 REMARK 465 PRO B 376 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 210 SG REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 139 CG CD1 CD2 REMARK 470 ASP B 142 CG OD1 OD2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 CYS B 210 SG REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 LYS B 256 CG CD CE NZ REMARK 470 ARG B 257 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 137 NZ LYS A 151 1.98 REMARK 500 OG1 THR B 93 NH1 ARG B 132 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 88 4.05 -63.42 REMARK 500 ILE A 143 108.34 -41.10 REMARK 500 THR A 146 -41.18 -27.63 REMARK 500 CYS A 303 -36.02 -146.40 REMARK 500 LEU B 88 1.75 -60.91 REMARK 500 LYS B 256 98.87 -50.84 REMARK 500 CYS B 303 -37.92 -145.06 REMARK 500 PHE B 320 79.01 -111.50 REMARK 500 ARG B 329 47.97 39.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HWE RELATED DB: PDB REMARK 900 RELATED ID: 5HXU RELATED DB: PDB REMARK 900 RELATED ID: 5HXZ RELATED DB: PDB REMARK 900 RELATED ID: 5HY0 RELATED DB: PDB REMARK 900 RELATED ID: 5HY1 RELATED DB: PDB REMARK 900 RELATED ID: 5HY4 RELATED DB: PDB DBREF 5HY2 A 1 390 UNP E3JD18 E3JD18_FRASU 1 390 DBREF 5HY2 B 1 390 UNP E3JD18 E3JD18_FRASU 1 390 SEQADV 5HY2 MET A -19 UNP E3JD18 INITIATING METHIONINE SEQADV 5HY2 GLY A -18 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER A -17 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER A -16 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -15 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -14 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -13 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -12 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -11 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A -10 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER A -9 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER A -8 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 GLY A -7 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 LEU A -6 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 VAL A -5 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 PRO A -4 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 ARG A -3 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 GLY A -2 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER A -1 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS A 0 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 MET B -19 UNP E3JD18 INITIATING METHIONINE SEQADV 5HY2 GLY B -18 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER B -17 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER B -16 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -15 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -14 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -13 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -12 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -11 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B -10 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER B -9 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER B -8 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 GLY B -7 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 LEU B -6 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 VAL B -5 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 PRO B -4 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 ARG B -3 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 GLY B -2 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 SER B -1 UNP E3JD18 EXPRESSION TAG SEQADV 5HY2 HIS B 0 UNP E3JD18 EXPRESSION TAG SEQRES 1 A 410 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 410 LEU VAL PRO ARG GLY SER HIS MET PRO ASN PRO GLU ALA SEQRES 3 A 410 SER LEU SER PRO ARG SER ALA ARG TYR PRO LYS ALA SER SEQRES 4 A 410 MET HIS VAL VAL PRO MET LEU ALA PRO ASN ASP THR ALA SEQRES 5 A 410 ALA PHE ARG ALA LEU PHE ALA SER GLY ALA VAL ASP PRO SEQRES 6 A 410 ALA SER VAL VAL ALA LEU ILE ALA LYS SER GLU GLY SER SEQRES 7 A 410 GLY LEU HIS ASN ASP HIS ALA ARG VAL PHE ALA ASP VAL SEQRES 8 A 410 SER LEU ARG THR ALA LEU ALA GLU ALA ARG GLY CYS PRO SEQRES 9 A 410 VAL GLU ASP LEU ALA ASP SER VAL THR VAL ALA VAL SER SEQRES 10 A 410 GLY GLY SER PRO GLY VAL ILE SER PRO HIS VAL THR VAL SEQRES 11 A 410 VAL THR GLN GLU TRP VAL ALA ASP LEU PRO ALA GLY LEU SEQRES 12 A 410 PRO GLY VAL GLY LEU VAL VAL GLY ARG GLY HIS THR GLU SEQRES 13 A 410 PRO ILE LEU PRO GLU ASP ILE GLY ARG THR ALA GLN VAL SEQRES 14 A 410 ASP LYS VAL ALA ASP ALA VAL ALA ALA ALA MET LEU ASP SEQRES 15 A 410 ALA GLY VAL THR ASP PRO ASP ASP VAL HIS LEU VAL MET SEQRES 16 A 410 VAL LYS GLY PRO ALA LEU SER SER ARG ALA VAL ALA ASP SEQRES 17 A 410 ALA LEU SER ARG GLY LYS THR VAL VAL THR GLY ASP TYR SEQRES 18 A 410 GLY ILE GLY PRO MET GLY SER MET CYS TRP SER ASN ASP SEQRES 19 A 410 ALA SER ALA LEU GLY VAL ALA VAL ALA LEU GLY GLU VAL SEQRES 20 A 410 LYS ARG ASP LEU VAL ALA ASP ASP ARG ILE ARG SER ASP SEQRES 21 A 410 TRP ASP LEU PHE SER ALA VAL ALA ALA THR SER SER GLY SEQRES 22 A 410 GLY GLU LYS ARG GLY GLY GLU VAL LEU LEU LEU ALA ASN SEQRES 23 A 410 SER ALA GLN SER ALA SER GLU LEU ARG ILE GLY HIS GLY SEQRES 24 A 410 ILE THR ARG ASP MET ALA ASP THR GLU GLY ILE LYS THR SEQRES 25 A 410 ALA ILE ARG THR ALA GLY VAL ASP PHE ASP CYS CYS LEU SEQRES 26 A 410 SER PRO ALA GLN GLN ALA GLN VAL VAL GLN VAL PHE GLY SEQRES 27 A 410 LYS PHE VAL LEU PRO GLY SER ASP VAL LEU ARG GLY GLN SEQRES 28 A 410 HIS ILE THR ALA LEU ASP ASP HIS GLU ALA HIS HIS VAL SEQRES 29 A 410 ALA LYS ALA VAL GLY GLY ALA LEU VAL VAL SER ILE THR SEQRES 30 A 410 GLY GLN PRO MET SER PHE ILE SER GLY GLY GLU ARG ASN SEQRES 31 A 410 SER HIS MET GLY PRO PRO GLY GLY ASN PRO VAL ALA ALA SEQRES 32 A 410 VAL VAL ARG ARG LEU PRO ALA SEQRES 1 B 410 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 410 LEU VAL PRO ARG GLY SER HIS MET PRO ASN PRO GLU ALA SEQRES 3 B 410 SER LEU SER PRO ARG SER ALA ARG TYR PRO LYS ALA SER SEQRES 4 B 410 MET HIS VAL VAL PRO MET LEU ALA PRO ASN ASP THR ALA SEQRES 5 B 410 ALA PHE ARG ALA LEU PHE ALA SER GLY ALA VAL ASP PRO SEQRES 6 B 410 ALA SER VAL VAL ALA LEU ILE ALA LYS SER GLU GLY SER SEQRES 7 B 410 GLY LEU HIS ASN ASP HIS ALA ARG VAL PHE ALA ASP VAL SEQRES 8 B 410 SER LEU ARG THR ALA LEU ALA GLU ALA ARG GLY CYS PRO SEQRES 9 B 410 VAL GLU ASP LEU ALA ASP SER VAL THR VAL ALA VAL SER SEQRES 10 B 410 GLY GLY SER PRO GLY VAL ILE SER PRO HIS VAL THR VAL SEQRES 11 B 410 VAL THR GLN GLU TRP VAL ALA ASP LEU PRO ALA GLY LEU SEQRES 12 B 410 PRO GLY VAL GLY LEU VAL VAL GLY ARG GLY HIS THR GLU SEQRES 13 B 410 PRO ILE LEU PRO GLU ASP ILE GLY ARG THR ALA GLN VAL SEQRES 14 B 410 ASP LYS VAL ALA ASP ALA VAL ALA ALA ALA MET LEU ASP SEQRES 15 B 410 ALA GLY VAL THR ASP PRO ASP ASP VAL HIS LEU VAL MET SEQRES 16 B 410 VAL LYS GLY PRO ALA LEU SER SER ARG ALA VAL ALA ASP SEQRES 17 B 410 ALA LEU SER ARG GLY LYS THR VAL VAL THR GLY ASP TYR SEQRES 18 B 410 GLY ILE GLY PRO MET GLY SER MET CYS TRP SER ASN ASP SEQRES 19 B 410 ALA SER ALA LEU GLY VAL ALA VAL ALA LEU GLY GLU VAL SEQRES 20 B 410 LYS ARG ASP LEU VAL ALA ASP ASP ARG ILE ARG SER ASP SEQRES 21 B 410 TRP ASP LEU PHE SER ALA VAL ALA ALA THR SER SER GLY SEQRES 22 B 410 GLY GLU LYS ARG GLY GLY GLU VAL LEU LEU LEU ALA ASN SEQRES 23 B 410 SER ALA GLN SER ALA SER GLU LEU ARG ILE GLY HIS GLY SEQRES 24 B 410 ILE THR ARG ASP MET ALA ASP THR GLU GLY ILE LYS THR SEQRES 25 B 410 ALA ILE ARG THR ALA GLY VAL ASP PHE ASP CYS CYS LEU SEQRES 26 B 410 SER PRO ALA GLN GLN ALA GLN VAL VAL GLN VAL PHE GLY SEQRES 27 B 410 LYS PHE VAL LEU PRO GLY SER ASP VAL LEU ARG GLY GLN SEQRES 28 B 410 HIS ILE THR ALA LEU ASP ASP HIS GLU ALA HIS HIS VAL SEQRES 29 B 410 ALA LYS ALA VAL GLY GLY ALA LEU VAL VAL SER ILE THR SEQRES 30 B 410 GLY GLN PRO MET SER PHE ILE SER GLY GLY GLU ARG ASN SEQRES 31 B 410 SER HIS MET GLY PRO PRO GLY GLY ASN PRO VAL ALA ALA SEQRES 32 B 410 VAL VAL ARG ARG LEU PRO ALA FORMUL 3 HOH *31(H2 O) HELIX 1 AA1 THR A 31 SER A 40 1 10 HELIX 2 AA2 ASP A 44 ALA A 46 5 3 HELIX 3 AA3 ASP A 63 GLY A 82 1 20 HELIX 4 AA4 ASP A 87 VAL A 92 1 6 HELIX 5 AA5 ARG A 145 ALA A 163 1 19 HELIX 6 AA6 ASP A 167 ASP A 169 5 3 HELIX 7 AA7 TRP A 211 LEU A 224 1 14 HELIX 8 AA8 THR A 287 ALA A 297 1 11 HELIX 9 AA9 SER A 306 GLN A 312 1 7 HELIX 10 AB1 GLU A 340 GLY A 358 1 19 HELIX 11 AB2 THR B 31 SER B 40 1 10 HELIX 12 AB3 ASP B 44 ALA B 46 5 3 HELIX 13 AB4 ASP B 63 GLY B 82 1 20 HELIX 14 AB5 ASP B 87 VAL B 92 1 6 HELIX 15 AB6 ARG B 145 ALA B 163 1 19 HELIX 16 AB7 ASP B 167 ASP B 169 5 3 HELIX 17 AB8 TRP B 211 LEU B 224 1 14 HELIX 18 AB9 THR B 287 ALA B 297 1 11 HELIX 19 AC1 SER B 306 GLN B 312 1 7 HELIX 20 AC2 GLU B 340 GLY B 358 1 19 SHEET 1 AA1 4 TYR A 15 PRO A 24 0 SHEET 2 AA1 4 HIS A 107 VAL A 116 -1 O VAL A 110 N HIS A 21 SHEET 3 AA1 4 VAL A 48 SER A 55 -1 N ILE A 52 O THR A 109 SHEET 4 AA1 4 THR A 93 GLY A 98 1 O THR A 93 N LEU A 51 SHEET 1 AA2 4 GLY A 127 HIS A 134 0 SHEET 2 AA2 4 GLU A 260 SER A 267 -1 O LEU A 263 N GLY A 131 SHEET 3 AA2 4 VAL A 171 GLY A 178 -1 N MET A 175 O LEU A 262 SHEET 4 AA2 4 ALA A 248 SER A 252 1 O SER A 251 N VAL A 176 SHEET 1 AA3 4 LEU A 274 THR A 281 0 SHEET 2 AA3 4 ASN A 379 ARG A 386 -1 O ASN A 379 N THR A 281 SHEET 3 AA3 4 VAL A 313 PHE A 320 -1 N PHE A 317 O ALA A 382 SHEET 4 AA3 4 PHE A 363 GLY A 366 1 O SER A 365 N PHE A 320 SHEET 1 AA4 2 VAL A 327 LEU A 328 0 SHEET 2 AA4 2 GLN A 331 HIS A 332 -1 O GLN A 331 N LEU A 328 SHEET 1 AA5 4 TYR B 15 PRO B 24 0 SHEET 2 AA5 4 HIS B 107 VAL B 116 -1 O VAL B 110 N HIS B 21 SHEET 3 AA5 4 VAL B 48 SER B 55 -1 N ILE B 52 O THR B 109 SHEET 4 AA5 4 THR B 93 GLY B 98 1 O THR B 93 N LEU B 51 SHEET 1 AA6 4 GLY B 127 HIS B 134 0 SHEET 2 AA6 4 GLU B 260 SER B 267 -1 O LEU B 263 N GLY B 131 SHEET 3 AA6 4 VAL B 171 GLY B 178 -1 N MET B 175 O LEU B 262 SHEET 4 AA6 4 ALA B 248 SER B 252 1 O SER B 251 N VAL B 176 SHEET 1 AA7 4 LEU B 274 THR B 281 0 SHEET 2 AA7 4 ASN B 379 ARG B 386 -1 O ASN B 379 N THR B 281 SHEET 3 AA7 4 VAL B 313 PHE B 320 -1 N VAL B 314 O VAL B 384 SHEET 4 AA7 4 PHE B 363 GLY B 366 1 O SER B 365 N PHE B 320 SHEET 1 AA8 2 VAL B 327 LEU B 328 0 SHEET 2 AA8 2 GLN B 331 HIS B 332 -1 O GLN B 331 N LEU B 328 SSBOND 1 CYS A 303 CYS B 304 1555 1555 2.01 SSBOND 2 CYS A 304 CYS B 303 1555 1555 2.04 CRYST1 93.297 72.750 133.054 90.00 92.22 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010718 0.000000 0.000415 0.00000 SCALE2 0.000000 0.013746 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007521 0.00000