HEADER UNKNOWN FUNCTION 02-FEB-16 5HZL TITLE SECRETED INTERNALIN-LIKE PROTEIN LMO2445 FROM LISTERIA MONOCYTOGENES COMPND MOL_ID: 1; COMPND 2 MOLECULE: LMO2445 PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES EGD-E; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: ATCC BAA-679 / EGD-E; SOURCE 5 GENE: LMO2445; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEUCINE RICH REPEAT, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR S.H.LIGHT,G.MINASOV,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 2 INFECTIOUS DISEASES (CSGID) REVDAT 1 17-FEB-16 5HZL 0 JRNL AUTH S.H.LIGHT,G.MINASOV,W.F.ANDERSON, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL SECRETED INTERNALIN-LIKE PROTEIN LMO2445 FROM LISTERIA JRNL TITL 2 MONOCYTOGENES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 687 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 968 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2164 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.50000 REMARK 3 B22 (A**2) : 0.50000 REMARK 3 B33 (A**2) : -1.63000 REMARK 3 B12 (A**2) : 0.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.392 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.261 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.188 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.912 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2227 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2069 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3048 ; 1.693 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4783 ; 1.083 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 277 ; 1.985 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;28.881 ;26.832 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 317 ; 7.583 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 2.878 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 354 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2530 ; 0.024 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 461 ; 0.020 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1117 ; 1.179 ; 3.761 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1116 ; 1.179 ; 3.761 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1391 ; 2.001 ; 5.632 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1392 ; 2.001 ; 5.632 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1110 ; 1.305 ; 3.952 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1111 ; 1.305 ; 3.954 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1658 ; 2.208 ; 5.862 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2366 ; 3.886 ;30.375 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2367 ; 3.885 ;30.390 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 38 REMARK 3 ORIGIN FOR THE GROUP (A): 66.7342 -28.5407 25.9034 REMARK 3 T TENSOR REMARK 3 T11: 0.0435 T22: 0.0867 REMARK 3 T33: 0.0488 T12: -0.0147 REMARK 3 T13: -0.0121 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 6.1144 L22: 4.9760 REMARK 3 L33: 6.3715 L12: 0.8591 REMARK 3 L13: 0.5614 L23: -3.2801 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: -0.2646 S13: 0.3305 REMARK 3 S21: 0.1581 S22: -0.1016 S23: -0.2360 REMARK 3 S31: -0.2379 S32: 0.1535 S33: 0.0366 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 39 B 95 REMARK 3 ORIGIN FOR THE GROUP (A): 68.1030 -27.0004 17.8627 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.0659 REMARK 3 T33: 0.0148 T12: -0.0365 REMARK 3 T13: -0.0306 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 2.5836 L22: 1.6453 REMARK 3 L33: 3.2760 L12: 0.4645 REMARK 3 L13: -0.7553 L23: -1.8091 REMARK 3 S TENSOR REMARK 3 S11: -0.0761 S12: -0.1988 S13: 0.0663 REMARK 3 S21: 0.1296 S22: -0.0998 S23: -0.0764 REMARK 3 S31: -0.3924 S32: 0.3246 S33: 0.1759 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 212 REMARK 3 ORIGIN FOR THE GROUP (A): 68.9887 -15.0351 -2.6220 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.0964 REMARK 3 T33: 0.0873 T12: -0.0404 REMARK 3 T13: -0.0087 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.9266 L22: 1.6582 REMARK 3 L33: 2.3101 L12: -0.5389 REMARK 3 L13: 0.3786 L23: -0.7592 REMARK 3 S TENSOR REMARK 3 S11: 0.0189 S12: -0.0559 S13: 0.2376 REMARK 3 S21: -0.0968 S22: -0.2309 S23: -0.2648 REMARK 3 S31: -0.1046 S32: 0.2292 S33: 0.2120 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 213 B 281 REMARK 3 ORIGIN FOR THE GROUP (A): 54.3058 -5.2115 -23.5959 REMARK 3 T TENSOR REMARK 3 T11: 0.3230 T22: 0.0700 REMARK 3 T33: 0.0596 T12: 0.0623 REMARK 3 T13: -0.0527 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 6.0370 L22: 2.5935 REMARK 3 L33: 3.3406 L12: -0.1964 REMARK 3 L13: 1.3645 L23: 0.2336 REMARK 3 S TENSOR REMARK 3 S11: 0.1427 S12: 0.4917 S13: 0.3257 REMARK 3 S21: -0.6889 S22: -0.1995 S23: 0.2212 REMARK 3 S31: -0.2824 S32: -0.0328 S33: 0.0569 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 282 B 299 REMARK 3 ORIGIN FOR THE GROUP (A): 52.5904 -9.3543 -18.4814 REMARK 3 T TENSOR REMARK 3 T11: 0.3047 T22: 0.1979 REMARK 3 T33: 0.0768 T12: 0.0188 REMARK 3 T13: -0.0195 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 6.2302 L22: 8.7216 REMARK 3 L33: 0.9098 L12: -4.9194 REMARK 3 L13: 0.0652 L23: 1.7803 REMARK 3 S TENSOR REMARK 3 S11: 0.6584 S12: 0.2791 S13: -0.4761 REMARK 3 S21: -0.6731 S22: -0.6552 S23: 0.3859 REMARK 3 S31: -0.2289 S32: -0.0484 S33: -0.0032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26135 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 17.5 MG/ML, 0.5 M NACL, 10 MM REMARK 280 TRIS PH 8.3, 1 MM TCEP CRYSTALLIZATION CONDITION: PACT B11 REMARK 280 (QIAGEN), 0.2 M CALCIUM CHLORIDE, 0.1 M MES PH 6, 20% (W/V) PEG REMARK 280 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.76200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.52400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.52400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.76200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE B 1 REMARK 465 LEU B 2 REMARK 465 PHE B 3 REMARK 465 ALA B 4 REMARK 465 PRO B 5 REMARK 465 THR B 6 REMARK 465 ILE B 7 REMARK 465 LYS B 8 REMARK 465 ALA B 9 REMARK 465 GLN B 10 REMARK 465 ALA B 11 REMARK 465 SER B 235 REMARK 465 ASN B 236 REMARK 465 HIS B 237 REMARK 465 ASP B 238 REMARK 465 ASN B 284 REMARK 465 SER B 285 REMARK 465 GLY B 286 REMARK 465 GLU B 287 REMARK 465 GLU B 300 REMARK 465 SER B 301 REMARK 465 ASN B 302 REMARK 465 ALA B 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 502 O HOH B 502 5554 1.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 132 -157.62 -97.35 REMARK 500 ASN B 133 70.87 -151.68 REMARK 500 ASN B 180 -167.57 -103.02 REMARK 500 ASN B 202 72.10 49.79 REMARK 500 GLN B 214 108.53 -57.89 REMARK 500 ALA B 233 80.91 -161.64 REMARK 500 ASP B 258 15.14 -143.16 REMARK 500 GLU B 266 76.44 -62.39 REMARK 500 THR B 289 166.02 177.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 27 OE2 REMARK 620 2 GLU B 31 OE1 101.7 REMARK 620 3 GLU B 31 OE2 96.2 51.9 REMARK 620 4 ASN B 109 OD1 109.4 58.9 109.5 REMARK 620 5 HOH B 521 O 165.8 92.1 94.8 75.1 REMARK 620 6 HOH B 507 O 87.2 129.0 77.4 160.6 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 35 O REMARK 620 2 ASP B 38 OD1 107.7 REMARK 620 3 HOH B 524 O 58.2 122.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 40 OD1 REMARK 620 2 ASP B 44 OD1 107.8 REMARK 620 3 ASP B 44 OD2 75.7 51.6 REMARK 620 4 HOH B 515 O 70.2 86.0 111.6 REMARK 620 5 GLU B 153 OE2 49.1 77.4 29.1 105.3 REMARK 620 6 GLU B 179 OE1 46.8 75.3 29.5 100.3 5.2 REMARK 620 7 GLU B 179 OE2 47.0 76.8 30.0 102.2 3.1 2.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 153 OE1 REMARK 620 2 GLU B 153 OE2 45.7 REMARK 620 3 ASP B 40 OD2 69.2 106.1 REMARK 620 4 HOH B 515 O 80.5 64.9 75.3 REMARK 620 5 HOH B 532 O 149.3 117.0 100.6 68.8 REMARK 620 6 HOH B 516 O 69.0 74.4 115.7 139.2 137.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 163 OE1 REMARK 620 2 GLU B 187 OE2 73.5 REMARK 620 3 HOH B 504 O 94.1 97.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 173 OD1 REMARK 620 2 GLN B 194 O 73.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG5 B 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95186 RELATED DB: TARGETTRACK DBREF 5HZL B 1 300 UNP Q8Y4J3 Q8Y4J3_LISMO 1 300 SEQADV 5HZL SER B 301 UNP Q8Y4J3 EXPRESSION TAG SEQADV 5HZL ASN B 302 UNP Q8Y4J3 EXPRESSION TAG SEQADV 5HZL ALA B 303 UNP Q8Y4J3 EXPRESSION TAG SEQRES 1 B 303 MSE LEU PHE ALA PRO THR ILE LYS ALA GLN ALA ASP THR SEQRES 2 B 303 VAL PRO LEU PRO ALA PRO ILE ILE GLU ALA PHE PRO VAL SEQRES 3 B 303 GLU ALA ILE ALA GLU ALA ILE ALA GLY GLU LEU ASP LYS SEQRES 4 B 303 ASP SER VAL ASN ASP THR ILE THR GLN ALA ASP LEU ASP SEQRES 5 B 303 THR MSE THR ALA ILE PRO LEU PRO SER LEU GLY LEU THR SEQRES 6 B 303 GLY GLU ASP LEU SER VAL LEU ASN ASN GLU VAL PHE THR SEQRES 7 B 303 ASN ALA ILE GLU LEU ALA ILE TRP SER ASN ASN ILE GLY SEQRES 8 B 303 GLU LEU PRO ASP LEU SER GLU ALA LEU PRO ALA LEU GLU SEQRES 9 B 303 ASN ILE GLU ALA ASN GLY ALA ASN ILE THR VAL PHE PRO SEQRES 10 B 303 ASP ALA ASN TYR PRO ASN LEU THR ASN VAL ASP LEU SER SEQRES 11 B 303 GLN ASN ASN PHE GLY PHE ASN ILE PRO LYS PHE VAL GLY SEQRES 12 B 303 MSE GLU GLY LEU VAL SER ILE ASN MSE GLU ASN ALA GLY SEQRES 13 B 303 LEU SER GLY TYR ILE ALA GLU ASP ILE TRP MSE ASN MSE SEQRES 14 B 303 PRO ASN LEU ASP SER LEU ILE LEU ASN GLU ASN HIS LEU SEQRES 15 B 303 ILE SER ILE PRO GLU ASP ILE PHE LEU SER GLN GLN LEU SEQRES 16 B 303 GLY THR HIS SER PHE ALA ASN GLN THR ALA THR TYR PRO SEQRES 17 B 303 PRO THR THR ILE LYS GLN GLY GLU ASN LEU LYS VAL PHE SEQRES 18 B 303 VAL PRO PHE ILE TYR GLN ALA LEU ASP PHE ILE ALA PRO SEQRES 19 B 303 SER ASN HIS ASP LEU ILE ILE ILE LYS ASP ASN GLY ARG SEQRES 20 B 303 THR LEU TYR GLU PRO PRO TYR PRO THR TYR ASP GLY SER SEQRES 21 B 303 TYR MSE TYR THR ILE GLU THR ALA GLY LEU GLN PRO GLY SEQRES 22 B 303 GLU HIS LEU LEU GLU ILE SER LEU GLY TYR ASN SER GLY SEQRES 23 B 303 GLU TYR THR GLY TRP TYR ASP PHE PRO VAL THR ILE THR SEQRES 24 B 303 GLU SER ASN ALA MODRES 5HZL MSE B 54 MET MODIFIED RESIDUE MODRES 5HZL MSE B 144 MET MODIFIED RESIDUE MODRES 5HZL MSE B 152 MET MODIFIED RESIDUE MODRES 5HZL MSE B 167 MET MODIFIED RESIDUE MODRES 5HZL MSE B 169 MET MODIFIED RESIDUE MODRES 5HZL MSE B 262 MET MODIFIED RESIDUE HET MSE B 54 8 HET MSE B 144 8 HET MSE B 152 8 HET MSE B 167 8 HET MSE B 169 8 HET MSE B 262 8 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HET CA B 404 1 HET CA B 405 1 HET CA B 406 1 HET CA B 407 1 HET PG5 B 408 12 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM PG5 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 CA 7(CA 2+) FORMUL 9 PG5 C8 H18 O4 FORMUL 10 HOH *35(H2 O) HELIX 1 AA1 ILE B 20 PHE B 24 1 5 HELIX 2 AA2 VAL B 26 LEU B 37 1 12 HELIX 3 AA3 THR B 47 ASP B 52 1 6 HELIX 4 AA4 THR B 65 VAL B 71 1 7 HELIX 5 AA5 LEU B 72 GLU B 75 5 4 HELIX 6 AA6 PRO B 186 SER B 192 1 7 HELIX 7 AA7 VAL B 222 ALA B 228 1 7 HELIX 8 AA8 LEU B 229 PHE B 231 5 3 SHEET 1 AA1 2 ALA B 18 PRO B 19 0 SHEET 2 AA1 2 THR B 45 ILE B 46 -1 O ILE B 46 N ALA B 18 SHEET 1 AA2 7 ALA B 56 PRO B 58 0 SHEET 2 AA2 7 GLU B 82 ALA B 84 1 O ALA B 84 N ILE B 57 SHEET 3 AA2 7 ASN B 105 GLU B 107 1 O GLU B 107 N LEU B 83 SHEET 4 AA2 7 ASN B 126 ASP B 128 1 O ASP B 128 N ILE B 106 SHEET 5 AA2 7 SER B 149 ASN B 151 1 O ASN B 151 N VAL B 127 SHEET 6 AA2 7 SER B 174 ILE B 176 1 O ILE B 176 N ILE B 150 SHEET 7 AA2 7 THR B 197 SER B 199 1 O THR B 197 N LEU B 175 SHEET 1 AA3 2 GLY B 91 GLU B 92 0 SHEET 2 AA3 2 ILE B 113 VAL B 115 1 O THR B 114 N GLY B 91 SHEET 1 AA4 2 SER B 158 GLY B 159 0 SHEET 2 AA4 2 HIS B 181 LEU B 182 1 O HIS B 181 N GLY B 159 SHEET 1 AA5 3 GLN B 203 THR B 206 0 SHEET 2 AA5 3 GLY B 290 ILE B 298 1 O ASP B 293 N ALA B 205 SHEET 3 AA5 3 THR B 210 ILE B 212 1 N ILE B 212 O THR B 297 SHEET 1 AA6 5 GLN B 203 THR B 206 0 SHEET 2 AA6 5 GLY B 290 ILE B 298 1 O ASP B 293 N ALA B 205 SHEET 3 AA6 5 GLY B 273 LEU B 281 -1 N HIS B 275 O VAL B 296 SHEET 4 AA6 5 ILE B 240 ASP B 244 -1 N ILE B 241 O SER B 280 SHEET 5 AA6 5 ARG B 247 TYR B 250 -1 O LEU B 249 N ILE B 242 SHEET 1 AA7 2 LYS B 219 PHE B 221 0 SHEET 2 AA7 2 MSE B 262 THR B 264 -1 O TYR B 263 N VAL B 220 LINK OE2 GLU B 27 CA CA B 401 1555 1555 2.58 LINK OE1 GLU B 31 CA CA B 401 1555 1555 2.61 LINK OE2 GLU B 31 CA CA B 401 1555 1555 2.42 LINK O GLY B 35 CA CA B 407 1555 1555 2.82 LINK OD1 ASP B 38 CA CA B 407 1555 1555 2.98 LINK OD1 ASP B 40 CA CA B 402 1555 1555 2.44 LINK OD1 ASP B 44 CA CA B 402 1555 1555 2.48 LINK OD2 ASP B 44 CA CA B 402 1555 1555 2.46 LINK C THR B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N THR B 55 1555 1555 1.33 LINK C GLY B 143 N MSE B 144 1555 1555 1.34 LINK C MSE B 144 N GLU B 145 1555 1555 1.33 LINK C ASN B 151 N MSE B 152 1555 1555 1.34 LINK C MSE B 152 N GLU B 153 1555 1555 1.33 LINK OE1 GLU B 153 CA CA B 404 1555 1555 2.78 LINK OE2 GLU B 153 CA CA B 404 1555 1555 2.73 LINK OE1 GLU B 163 CA CA B 403 1555 1555 2.55 LINK C TRP B 166 N MSE B 167 1555 1555 1.33 LINK C MSE B 167 N ASN B 168 1555 1555 1.33 LINK C ASN B 168 N MSE B 169 1555 1555 1.34 LINK C MSE B 169 N PRO B 170 1555 1555 1.34 LINK OD1 ASP B 173 CA CA B 405 1555 1555 2.60 LINK OE2 GLU B 187 CA CA B 403 1555 1555 2.56 LINK O GLN B 194 CA CA B 405 1555 1555 2.38 LINK OD1 ASP B 258 CA CA B 406 1555 1555 2.94 LINK C TYR B 261 N MSE B 262 1555 1555 1.33 LINK C MSE B 262 N TYR B 263 1555 1555 1.33 LINK CA CA B 402 O HOH B 515 1555 1555 2.44 LINK CA CA B 407 O HOH B 524 1555 1555 3.18 LINK OD2 ASP B 40 CA CA B 404 1555 3655 2.48 LINK OD1 ASN B 109 CA CA B 401 1555 3654 2.36 LINK OE2 GLU B 153 CA CA B 402 1555 2544 2.62 LINK OE1 GLU B 179 CA CA B 402 1555 2544 2.63 LINK OE2 GLU B 179 CA CA B 402 1555 2544 2.52 LINK CA CA B 401 O HOH B 521 1555 2545 2.27 LINK CA CA B 401 O HOH B 507 1555 2545 2.50 LINK CA CA B 403 O HOH B 504 1555 5554 2.40 LINK CA CA B 404 O HOH B 515 1555 2544 2.61 LINK CA CA B 404 O HOH B 532 1555 2544 2.41 LINK CA CA B 404 O HOH B 516 1555 2544 2.40 CISPEP 1 LEU B 16 PRO B 17 0 1.39 SITE 1 AC1 5 GLU B 27 GLU B 31 ASN B 109 HOH B 507 SITE 2 AC1 5 HOH B 521 SITE 1 AC2 5 ASP B 40 ASP B 44 GLU B 153 GLU B 179 SITE 2 AC2 5 HOH B 515 SITE 1 AC3 4 GLU B 163 GLU B 187 ASP B 230 HOH B 504 SITE 1 AC4 5 ASP B 40 GLU B 153 HOH B 515 HOH B 516 SITE 2 AC4 5 HOH B 532 SITE 1 AC5 2 ASP B 173 GLN B 194 SITE 1 AC6 1 ASP B 258 SITE 1 AC7 2 GLY B 35 ASP B 38 SITE 1 AC8 1 THR B 206 CRYST1 120.350 120.350 62.286 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008309 0.004797 0.000000 0.00000 SCALE2 0.000000 0.009595 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016055 0.00000