HEADER HYDROLASE 03-FEB-16 5HZX TITLE CRYSTAL STRUCTURE OF ZEBRAFISH MTH1 IN COMPLEX WITH TH588 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUDIX (NUCLEOSIDE DIPHOSPHATE LINKED MOIETY X)-TYPE MOTIF COMPND 3 1; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: UNCHARACTERIZED PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: NUDT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INHIBITOR, COMPLEX, MTH1, TH588, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.NARWAL,R.GUSTAFSSON,L.BRAUTIGAM,L.PUDELKO,A.-S.JEMTH,H.GAD, AUTHOR 2 S.KARSTEN,J.CARRERAS-PUIGVERT,E.HOMAN,C.BERNDT,U.W.BERGLUND, AUTHOR 3 T.HELLEDAY,P.STENMARK REVDAT 5 10-JAN-24 5HZX 1 REMARK REVDAT 4 06-SEP-17 5HZX 1 REMARK REVDAT 3 01-JUN-16 5HZX 1 JRNL REVDAT 2 24-FEB-16 5HZX 1 AUTHOR REVDAT 1 10-FEB-16 5HZX 0 JRNL AUTH L.BRAUTIGAM,L.PUDELKO,A.S.JEMTH,H.GAD,M.NARWAL,R.GUSTAFSSON, JRNL AUTH 2 S.KARSTEN,J.CARRERAS PUIGVERT,E.HOMAN,C.BERNDT,U.W.BERGLUND, JRNL AUTH 3 P.STENMARK,T.HELLEDAY JRNL TITL HYPOXIC SIGNALING AND THE CELLULAR REDOX TUMOR ENVIRONMENT JRNL TITL 2 DETERMINE SENSITIVITY TO MTH1 INHIBITION. JRNL REF CANCER RES. V. 76 2366 2016 JRNL REFN ESSN 1538-7445 JRNL PMID 26862114 JRNL DOI 10.1158/0008-5472.CAN-15-2380 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1377 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1840 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 298 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.91000 REMARK 3 B22 (A**2) : -0.54000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.165 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.412 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2702 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2563 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3653 ; 1.311 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5908 ; 0.914 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 320 ; 5.981 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;32.176 ;24.462 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 482 ;13.372 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;18.846 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 384 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3030 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 629 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1266 ; 1.042 ; 1.629 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1264 ; 1.041 ; 1.628 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1589 ; 1.793 ; 2.437 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1590 ; 1.792 ; 2.437 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1436 ; 1.406 ; 1.846 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1436 ; 1.406 ; 1.846 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2058 ; 2.349 ; 2.707 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3011 ; 5.337 ;13.813 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3012 ; 5.337 ;13.825 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 3 156 B 3 156 9430 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HZX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91991 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26840 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.21000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3ZR1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG 10K, 0.1 M SODIUM ACETATE, PH REMARK 280 4.0, 0.2 M LITHIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.60100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.60100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 PHE B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 62 -83.45 -77.71 REMARK 500 ASP A 62 -83.45 -77.58 REMARK 500 ASP B 62 -81.95 -76.57 REMARK 500 ASP B 62 -81.95 -78.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2GE A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2GE B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N1U RELATED DB: PDB REMARK 900 4N1U CONTAINS THE SAME INHIBITOR DBREF 5HZX A 1 156 UNP Q7ZWC3 Q7ZWC3_DANRE 1 156 DBREF 5HZX B 1 156 UNP Q7ZWC3 Q7ZWC3_DANRE 1 156 SEQADV 5HZX MET A -19 UNP Q7ZWC3 INITIATING METHIONINE SEQADV 5HZX GLY A -18 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER A -17 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER A -16 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -15 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -14 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -13 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -12 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -11 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A -10 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER A -9 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER A -8 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX GLY A -7 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX LEU A -6 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX VAL A -5 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX PRO A -4 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX ARG A -3 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX GLY A -2 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER A -1 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS A 0 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX MET B -19 UNP Q7ZWC3 INITIATING METHIONINE SEQADV 5HZX GLY B -18 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER B -17 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER B -16 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -15 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -14 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -13 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -12 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -11 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B -10 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER B -9 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER B -8 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX GLY B -7 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX LEU B -6 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX VAL B -5 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX PRO B -4 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX ARG B -3 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX GLY B -2 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX SER B -1 UNP Q7ZWC3 EXPRESSION TAG SEQADV 5HZX HIS B 0 UNP Q7ZWC3 EXPRESSION TAG SEQRES 1 A 176 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 176 LEU VAL PRO ARG GLY SER HIS MET PHE THR SER LYS LEU SEQRES 3 A 176 LEU THR LEU VAL LEU VAL VAL GLN PRO GLY ARG VAL LEU SEQRES 4 A 176 LEU GLY MET LYS LYS ARG GLY PHE GLY ALA GLY LYS TRP SEQRES 5 A 176 ASN GLY PHE GLY GLY LYS VAL GLN THR GLY GLU THR ILE SEQRES 6 A 176 GLU GLN ALA ALA ARG ARG GLU LEU LEU GLU GLU SER GLY SEQRES 7 A 176 LEU THR VAL ASP THR LEU HIS LYS ILE GLY ASN ILE LYS SEQRES 8 A 176 PHE GLU PHE ILE GLY GLU THR GLU LEU MET ASP VAL HIS SEQRES 9 A 176 ILE PHE ARG ALA ASP ASN TYR GLU GLY GLU PRO ALA GLU SEQRES 10 A 176 SER ASP GLU MET ARG PRO GLN TRP PHE ASP ILE ASP LYS SEQRES 11 A 176 ILE PRO PHE SER GLN MET TRP ALA ASP ASP ILE LEU TRP SEQRES 12 A 176 PHE PRO LEU MET LEU GLN LYS LYS ARG PHE LEU GLY TYR SEQRES 13 A 176 PHE LYS PHE GLN GLY HIS ASP VAL ILE VAL GLU HIS LYS SEQRES 14 A 176 LEU ASP GLU VAL GLU ASP LEU SEQRES 1 B 176 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 176 LEU VAL PRO ARG GLY SER HIS MET PHE THR SER LYS LEU SEQRES 3 B 176 LEU THR LEU VAL LEU VAL VAL GLN PRO GLY ARG VAL LEU SEQRES 4 B 176 LEU GLY MET LYS LYS ARG GLY PHE GLY ALA GLY LYS TRP SEQRES 5 B 176 ASN GLY PHE GLY GLY LYS VAL GLN THR GLY GLU THR ILE SEQRES 6 B 176 GLU GLN ALA ALA ARG ARG GLU LEU LEU GLU GLU SER GLY SEQRES 7 B 176 LEU THR VAL ASP THR LEU HIS LYS ILE GLY ASN ILE LYS SEQRES 8 B 176 PHE GLU PHE ILE GLY GLU THR GLU LEU MET ASP VAL HIS SEQRES 9 B 176 ILE PHE ARG ALA ASP ASN TYR GLU GLY GLU PRO ALA GLU SEQRES 10 B 176 SER ASP GLU MET ARG PRO GLN TRP PHE ASP ILE ASP LYS SEQRES 11 B 176 ILE PRO PHE SER GLN MET TRP ALA ASP ASP ILE LEU TRP SEQRES 12 B 176 PHE PRO LEU MET LEU GLN LYS LYS ARG PHE LEU GLY TYR SEQRES 13 B 176 PHE LYS PHE GLN GLY HIS ASP VAL ILE VAL GLU HIS LYS SEQRES 14 B 176 LEU ASP GLU VAL GLU ASP LEU HET 2GE A 201 19 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET GOL A 205 6 HET PEG A 206 7 HET 2GE B 201 19 HET SO4 B 202 5 HET SO4 B 203 5 HET ACT B 204 4 HETNAM 2GE N~4~-CYCLOPROPYL-6-(2,3-DICHLOROPHENYL)PYRIMIDINE-2,4- HETNAM 2 2GE DIAMINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 2GE 2(C13 H12 CL2 N4) FORMUL 4 SO4 5(O4 S 2-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 PEG C4 H10 O3 FORMUL 12 ACT C2 H3 O2 1- FORMUL 13 HOH *298(H2 O) HELIX 1 AA1 THR A 44 GLY A 58 1 15 HELIX 2 AA2 ASP A 109 ILE A 111 5 3 HELIX 3 AA3 PRO A 112 MET A 116 5 5 HELIX 4 AA4 ASP A 119 GLN A 129 1 11 HELIX 5 AA5 GLU A 154 LEU A 156 5 3 HELIX 6 AA6 THR B 44 GLY B 58 1 15 HELIX 7 AA7 ASP B 109 ILE B 111 5 3 HELIX 8 AA8 PRO B 112 MET B 116 5 5 HELIX 9 AA9 ASP B 119 GLN B 129 1 11 HELIX 10 AB1 GLU B 154 LEU B 156 5 3 SHEET 1 AA1 4 TRP A 32 ASN A 33 0 SHEET 2 AA1 4 ARG A 17 LYS A 23 -1 N GLY A 21 O ASN A 33 SHEET 3 AA1 4 SER A 4 GLN A 14 -1 N GLN A 14 O ARG A 17 SHEET 4 AA1 4 MET A 101 ASP A 107 0 SHEET 1 AA2 7 PHE A 35 LYS A 38 0 SHEET 2 AA2 7 SER A 4 GLN A 14 -1 N THR A 8 O GLY A 37 SHEET 3 AA2 7 ARG A 17 LYS A 23 -1 O ARG A 17 N GLN A 14 SHEET 4 AA2 7 LEU A 80 ALA A 88 0 SHEET 5 AA2 7 HIS A 65 PHE A 74 -1 N GLY A 68 O ILE A 85 SHEET 6 AA2 7 PHE A 133 GLN A 140 1 O PHE A 139 N GLU A 73 SHEET 7 AA2 7 VAL A 144 GLU A 152 -1 O VAL A 144 N GLN A 140 SHEET 1 AA3 4 TRP B 32 ASN B 33 0 SHEET 2 AA3 4 ARG B 17 LYS B 23 -1 N GLY B 21 O ASN B 33 SHEET 3 AA3 4 SER B 4 GLN B 14 -1 N GLN B 14 O ARG B 17 SHEET 4 AA3 4 MET B 101 ASP B 107 0 SHEET 1 AA4 7 PHE B 35 LYS B 38 0 SHEET 2 AA4 7 SER B 4 GLN B 14 -1 N THR B 8 O GLY B 37 SHEET 3 AA4 7 ARG B 17 LYS B 23 -1 O ARG B 17 N GLN B 14 SHEET 4 AA4 7 LEU B 80 ALA B 88 0 SHEET 5 AA4 7 HIS B 65 PHE B 74 -1 N GLY B 68 O ILE B 85 SHEET 6 AA4 7 PHE B 133 GLN B 140 1 O PHE B 139 N GLU B 73 SHEET 7 AA4 7 VAL B 144 GLU B 152 -1 O VAL B 144 N GLN B 140 SITE 1 AC1 9 THR A 8 ASN A 33 PHE A 72 PHE A 74 SITE 2 AC1 9 MET A 81 TRP A 117 ASP A 119 ASP A 120 SITE 3 AC1 9 SO4 A 202 SITE 1 AC2 10 LEU A 9 LYS A 23 ASN A 33 GLY A 34 SITE 2 AC2 10 GLY A 36 GLY A 37 GLU A 56 2GE A 201 SITE 3 AC2 10 HOH A 339 LEU B 156 SITE 1 AC3 4 ARG A 132 HOH A 311 HOH A 347 ARG B 25 SITE 1 AC4 6 ASP A 62 THR A 63 HIS A 65 ASP A 89 SITE 2 AC4 6 ASN A 90 HOH A 308 SITE 1 AC5 2 ASN A 90 TYR A 91 SITE 1 AC6 8 GLU A 46 GLN A 47 ARG A 50 GLN A 115 SITE 2 AC6 8 HOH A 310 HOH A 324 HOH A 340 HOH A 356 SITE 1 AC7 9 THR B 8 PHE B 27 ASN B 33 PHE B 72 SITE 2 AC7 9 MET B 81 TRP B 117 ASP B 119 ASP B 120 SITE 3 AC7 9 SO4 B 202 SITE 1 AC8 8 LEU A 156 LYS B 23 GLY B 34 GLY B 36 SITE 2 AC8 8 GLY B 37 GLU B 56 2GE B 201 HOH B 324 SITE 1 AC9 3 ARG A 25 ARG B 132 HOH B 334 SITE 1 AD1 4 HOH A 335 LEU B 122 HOH B 309 HOH B 347 CRYST1 76.260 71.202 60.924 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013113 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016414 0.00000