HEADER IMMUNE SYSTEM 05-FEB-16 5I18 TITLE CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV1-69/IGKV4-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS MONOCLONAL ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.TEPLYAKOV,G.OBMOLOVA,T.MALIA,J.LUO,G.GILLILAND REVDAT 5 27-SEP-23 5I18 1 REMARK REVDAT 4 03-AUG-16 5I18 1 JRNL REVDAT 3 29-JUN-16 5I18 1 JRNL REVDAT 2 08-JUN-16 5I18 1 JRNL REVDAT 1 24-FEB-16 5I18 0 SPRSDE 24-FEB-16 5I18 3QOT JRNL AUTH A.TEPLYAKOV,G.OBMOLOVA,T.J.MALIA,J.LUO,S.MUZAMMIL,R.SWEET, JRNL AUTH 2 J.C.ALMAGRO,G.L.GILLILAND JRNL TITL STRUCTURAL DIVERSITY IN A HUMAN ANTIBODY GERMLINE LIBRARY. JRNL REF MABS V. 8 1045 2016 JRNL REFN ESSN 1942-0870 JRNL PMID 27210805 JRNL DOI 10.1080/19420862.2016.1190060 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.OBMOLOVA,T.J.MALIA,A.TEPLYAKOV,R.W.SWEET,G.L.GILLILAND REMARK 1 TITL PROTEIN CRYSTALLIZATION WITH MICROSEED MATRIX SCREENING: REMARK 1 TITL 2 APPLICATION TO HUMAN GERMLINE ANTIBODY FABS. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 70 1107 2014 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 PMID 25084393 REMARK 1 DOI 10.1107/S2053230X14012552 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 34850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2106 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.1670 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3263 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 399 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.848 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3373 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4589 ; 1.115 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 6.131 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;37.768 ;24.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 540 ;11.882 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.983 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 518 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2514 ; 0.000 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2146 ; 2.327 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3477 ; 3.944 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1227 ;19.502 ;88.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1112 ;20.200 ;88.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I18 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218091. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 95.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35965 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 22.30 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.23100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2DD8,1LVE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8K, 8% ETHYLENE GLYCOL, 0.1 M REMARK 280 HEPES PH 7.5, PH 7.50, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.02000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.02000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.02000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.02000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.02000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.02000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.02000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.02000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU L 219 REMARK 465 CYS L 220 REMARK 465 GLN H 1 REMARK 465 SER H 133 REMARK 465 SER H 134 REMARK 465 LYS H 135 REMARK 465 SER H 136 REMARK 465 THR H 137 REMARK 465 SER H 138 REMARK 465 GLY H 139 REMARK 465 LYS H 220 REMARK 465 SER H 221 REMARK 465 CYS H 222 REMARK 465 HIS H 223 REMARK 465 HIS H 224 REMARK 465 HIS H 225 REMARK 465 HIS H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA L 57 -37.09 67.92 REMARK 500 SER H 30 -121.72 48.76 REMARK 500 TYR H 103 -105.60 -118.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 560 DISTANCE = 6.34 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I15 RELATED DB: PDB REMARK 900 RELATED ID: 5I16 RELATED DB: PDB REMARK 900 RELATED ID: 5I17 RELATED DB: PDB REMARK 900 RELATED ID: 5I19 RELATED DB: PDB REMARK 900 RELATED ID: 5I1A RELATED DB: PDB REMARK 900 RELATED ID: 5I1C RELATED DB: PDB REMARK 900 RELATED ID: 5I1D RELATED DB: PDB REMARK 900 RELATED ID: 5I1E RELATED DB: PDB REMARK 900 RELATED ID: 5I1G RELATED DB: PDB REMARK 900 RELATED ID: 5I1H RELATED DB: PDB REMARK 900 RELATED ID: 5I1I RELATED DB: PDB REMARK 900 RELATED ID: 5I1J RELATED DB: PDB REMARK 900 RELATED ID: 5I1K RELATED DB: PDB REMARK 900 RELATED ID: 5I1L RELATED DB: PDB REMARK 900 RELATED ID: 4KMT RELATED DB: PDB DBREF 5I18 L 0 220 PDB 5I18 5I18 0 220 DBREF 5I18 H 1 228 PDB 5I18 5I18 1 228 SEQRES 1 L 221 MET ASP ILE VAL MET THR GLN SER PRO ASP SER LEU ALA SEQRES 2 L 221 VAL SER LEU GLY GLU ARG ALA THR ILE ASN CYS LYS SER SEQRES 3 L 221 SER GLN SER VAL LEU TYR SER SER ASN ASN LYS ASN TYR SEQRES 4 L 221 LEU ALA TRP TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS SEQRES 5 L 221 LEU LEU ILE TYR TRP ALA SER THR ARG GLU SER GLY VAL SEQRES 6 L 221 PRO ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE SEQRES 7 L 221 THR LEU THR ILE SER SER LEU GLN ALA GLU ASP VAL ALA SEQRES 8 L 221 VAL TYR TYR CYS GLN GLN TYR TYR SER THR PRO LEU THR SEQRES 9 L 221 PHE GLY GLN GLY THR LYS VAL GLU ILE LYS ARG THR VAL SEQRES 10 L 221 ALA ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU SEQRES 11 L 221 GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU SEQRES 12 L 221 ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS SEQRES 13 L 221 VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER SEQRES 14 L 221 VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SEQRES 15 L 221 SER SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS SEQRES 16 L 221 HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SEQRES 17 L 221 SER SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 228 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 228 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 228 GLY THR PHE SER SER TYR ALA ILE SER TRP VAL ARG GLN SEQRES 4 H 228 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE SEQRES 5 H 228 PRO ILE PHE GLY THR ALA ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 228 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 H 228 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 228 ALA VAL TYR TYR CYS ALA ARG TYR ASP GLY ILE TYR GLY SEQRES 9 H 228 GLU LEU ASP PHE TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 H 228 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 H 228 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 H 228 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 H 228 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 H 228 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 H 228 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 H 228 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 H 228 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 18 H 228 CYS HIS HIS HIS HIS HIS HIS HET GOL L 901 6 HET GOL L 902 6 HET GOL L 903 6 HET GOL H 301 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *399(H2 O) HELIX 1 AA1 GLN L 85 VAL L 89 5 5 HELIX 2 AA2 SER L 127 LYS L 132 1 6 HELIX 3 AA3 LYS L 189 HIS L 195 1 7 HELIX 4 AA4 GLY H 26 THR H 28 5 3 HELIX 5 AA5 GLN H 62 GLN H 65 5 4 HELIX 6 AA6 GLU H 74 THR H 76 5 3 HELIX 7 AA7 ARG H 87 THR H 91 5 5 HELIX 8 AA8 SER H 162 ALA H 164 5 3 HELIX 9 AA9 SER H 193 LEU H 195 5 3 HELIX 10 AB1 LYS H 207 ASN H 210 5 4 SHEET 1 AA1 4 MET L 4 SER L 7 0 SHEET 2 AA1 4 ALA L 19 SER L 25 -1 O ASN L 22 N SER L 7 SHEET 3 AA1 4 ASP L 76 ILE L 81 -1 O LEU L 79 N ILE L 21 SHEET 4 AA1 4 PHE L 68 SER L 73 -1 N SER L 69 O THR L 80 SHEET 1 AA2 6 SER L 10 SER L 14 0 SHEET 2 AA2 6 THR L 108 LYS L 113 1 O LYS L 109 N LEU L 11 SHEET 3 AA2 6 ALA L 90 GLN L 96 -1 N ALA L 90 O VAL L 110 SHEET 4 AA2 6 LEU L 39 GLN L 44 -1 N ALA L 40 O GLN L 95 SHEET 5 AA2 6 LYS L 51 TYR L 55 -1 O LEU L 53 N TRP L 41 SHEET 6 AA2 6 THR L 59 ARG L 60 -1 O THR L 59 N TYR L 55 SHEET 1 AA3 4 SER L 10 SER L 14 0 SHEET 2 AA3 4 THR L 108 LYS L 113 1 O LYS L 109 N LEU L 11 SHEET 3 AA3 4 ALA L 90 GLN L 96 -1 N ALA L 90 O VAL L 110 SHEET 4 AA3 4 THR L 103 PHE L 104 -1 O THR L 103 N GLN L 96 SHEET 1 AA4 4 SER L 120 PHE L 124 0 SHEET 2 AA4 4 THR L 135 PHE L 145 -1 O ASN L 143 N SER L 120 SHEET 3 AA4 4 TYR L 179 SER L 188 -1 O LEU L 187 N ALA L 136 SHEET 4 AA4 4 SER L 165 VAL L 169 -1 N GLN L 166 O THR L 184 SHEET 1 AA5 4 ALA L 159 LEU L 160 0 SHEET 2 AA5 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 AA5 4 VAL L 197 THR L 203 -1 O GLU L 201 N GLN L 153 SHEET 4 AA5 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SHEET 1 AA6 4 LEU H 4 GLN H 6 0 SHEET 2 AA6 4 VAL H 18 ALA H 24 -1 O LYS H 23 N VAL H 5 SHEET 3 AA6 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 AA6 4 VAL H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA7 6 GLU H 10 LYS H 12 0 SHEET 2 AA7 6 THR H 113 VAL H 117 1 O THR H 116 N LYS H 12 SHEET 3 AA7 6 ALA H 92 TYR H 99 -1 N TYR H 94 O THR H 113 SHEET 4 AA7 6 ALA H 33 GLN H 39 -1 N ALA H 33 O TYR H 99 SHEET 5 AA7 6 GLU H 46 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 AA7 6 ALA H 58 TYR H 60 -1 O ASN H 59 N GLY H 50 SHEET 1 AA8 4 GLU H 10 LYS H 12 0 SHEET 2 AA8 4 THR H 113 VAL H 117 1 O THR H 116 N LYS H 12 SHEET 3 AA8 4 ALA H 92 TYR H 99 -1 N TYR H 94 O THR H 113 SHEET 4 AA8 4 PHE H 108 TRP H 109 -1 O PHE H 108 N ARG H 98 SHEET 1 AA9 4 SER H 126 LEU H 130 0 SHEET 2 AA9 4 THR H 141 TYR H 151 -1 O LEU H 147 N PHE H 128 SHEET 3 AA9 4 TYR H 182 PRO H 191 -1 O LEU H 184 N VAL H 148 SHEET 4 AA9 4 VAL H 169 THR H 171 -1 N HIS H 170 O VAL H 187 SHEET 1 AB1 4 SER H 126 LEU H 130 0 SHEET 2 AB1 4 THR H 141 TYR H 151 -1 O LEU H 147 N PHE H 128 SHEET 3 AB1 4 TYR H 182 PRO H 191 -1 O LEU H 184 N VAL H 148 SHEET 4 AB1 4 VAL H 175 LEU H 176 -1 N VAL H 175 O SER H 183 SHEET 1 AB2 3 THR H 157 TRP H 160 0 SHEET 2 AB2 3 ILE H 201 HIS H 206 -1 O ASN H 203 N SER H 159 SHEET 3 AB2 3 THR H 211 LYS H 216 -1 O VAL H 213 N VAL H 204 SSBOND 1 CYS L 23 CYS L 94 1555 1555 2.08 SSBOND 2 CYS L 140 CYS L 200 1555 1555 2.02 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.06 SSBOND 4 CYS H 146 CYS H 202 1555 1555 2.04 CISPEP 1 SER L 7 PRO L 8 0 -0.58 CISPEP 2 THR L 100 PRO L 101 0 -0.47 CISPEP 3 TYR L 146 PRO L 147 0 -0.75 CISPEP 4 PHE H 152 PRO H 153 0 -9.47 CISPEP 5 GLU H 154 PRO H 155 0 -6.39 SITE 1 AC1 8 HIS H 170 THR L 170 GLU L 171 ASP L 173 SITE 2 AC1 8 SER L 174 GOL L 903 HOH L1024 HOH L1102 SITE 1 AC2 6 SER L 58 ARG L 60 SER L 69 GLY L 70 SITE 2 AC2 6 LYS L 132 HOH L1029 SITE 1 AC3 8 THR H 166 ASP L 173 SER L 174 LYS L 175 SITE 2 AC3 8 GOL L 901 HOH L1013 HOH L1056 HOH L1167 SITE 1 AC4 11 PHE H 172 PRO H 173 VAL H 175 SER H 183 SITE 2 AC4 11 LEU H 184 SER H 185 HOH H 406 SER L 168 SITE 3 AC4 11 SER L 182 SER L 183 THR L 184 CRYST1 120.040 120.040 64.170 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008331 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008331 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015584 0.00000