HEADER METAL BINDING PROTEIN 09-FEB-16 5I2L TITLE STRUCTURE OF EF-HAND CONTAINING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: EF-HAND DOMAIN-CONTAINING PROTEIN D2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 70-184; COMPND 5 SYNONYM: SWIPROSIN-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EFHD2, SWS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CALCIUM BINDING PROTEIN, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.R.PARK,M.S.KWON,J.Y.AN,J.G.LEE,H.S.YOUN,Y.LEE,J.Y.KANG,T.G.KIM, AUTHOR 2 J.J.LIM,J.S.PARK,S.H.LEE,W.K.SONG,H.CHEONG,C.JUN,S.H.EOM REVDAT 2 20-MAR-24 5I2L 1 REMARK REVDAT 1 28-DEC-16 5I2L 0 JRNL AUTH K.R.PARK,M.S.KWON,J.Y.AN,J.G.LEE,H.S.YOUN,Y.LEE,J.Y.KANG, JRNL AUTH 2 T.G.KIM,J.J.LIM,J.S.PARK,S.H.LEE,W.K.SONG,H.K.CHEONG, JRNL AUTH 3 C.D.JUN,S.H.EOM JRNL TITL STRUCTURAL IMPLICATIONS OF CA(2+)-DEPENDENT ACTIN-BUNDLING JRNL TITL 2 FUNCTION OF HUMAN EFHD2/SWIPROSIN-1. JRNL REF SCI REP V. 6 39095 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27974828 JRNL DOI 10.1038/SREP39095 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_869 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 8598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7574 - 2.6664 1.00 2975 147 0.1651 0.1950 REMARK 3 2 2.6664 - 2.1164 0.99 2843 146 0.1619 0.2306 REMARK 3 3 2.1164 - 1.8489 0.98 2778 139 0.1677 0.2072 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 41.78 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.660 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.89230 REMARK 3 B22 (A**2) : -1.01620 REMARK 3 B33 (A**2) : -4.87620 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 870 REMARK 3 ANGLE : 1.150 1159 REMARK 3 CHIRALITY : 0.090 124 REMARK 3 PLANARITY : 0.004 150 REMARK 3 DIHEDRAL : 15.034 339 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 80:85) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8800 16.1109 -6.3151 REMARK 3 T TENSOR REMARK 3 T11: 0.2031 T22: 0.1628 REMARK 3 T33: 0.3529 T12: 0.0699 REMARK 3 T13: -0.0258 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.1790 L22: 0.0331 REMARK 3 L33: 0.3549 L12: 0.0531 REMARK 3 L13: -0.1688 L23: -0.0352 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: -0.2734 S13: 0.0777 REMARK 3 S21: 0.0392 S22: 0.3881 S23: -0.5405 REMARK 3 S31: 0.0268 S32: 0.2548 S33: 0.0141 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 86:113) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5172 6.3236 -2.7948 REMARK 3 T TENSOR REMARK 3 T11: 0.0536 T22: 0.0899 REMARK 3 T33: 0.1058 T12: 0.0247 REMARK 3 T13: -0.0123 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.3049 L22: 0.8203 REMARK 3 L33: 0.4167 L12: 0.0224 REMARK 3 L13: 0.2206 L23: -0.0483 REMARK 3 S TENSOR REMARK 3 S11: -0.0542 S12: -0.0428 S13: 0.1020 REMARK 3 S21: -0.0212 S22: 0.0179 S23: 0.2378 REMARK 3 S31: 0.0233 S32: -0.2418 S33: -0.0856 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 114:129) REMARK 3 ORIGIN FOR THE GROUP (A): -18.8083 -8.0229 3.5764 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.0902 REMARK 3 T33: 0.1416 T12: -0.0385 REMARK 3 T13: -0.0020 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.1054 L22: 0.2032 REMARK 3 L33: 0.4001 L12: -0.0424 REMARK 3 L13: 0.0941 L23: 0.0253 REMARK 3 S TENSOR REMARK 3 S11: -0.0566 S12: -0.2764 S13: -0.1092 REMARK 3 S21: 0.3212 S22: 0.1545 S23: -0.0985 REMARK 3 S31: 0.5036 S32: -0.6180 S33: 0.0799 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 130:140) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0398 -4.8815 2.9365 REMARK 3 T TENSOR REMARK 3 T11: 0.1233 T22: 0.1128 REMARK 3 T33: 0.1565 T12: 0.0173 REMARK 3 T13: -0.0105 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.0669 L22: 0.4532 REMARK 3 L33: 0.0037 L12: 0.1307 REMARK 3 L13: 0.0471 L23: -0.0074 REMARK 3 S TENSOR REMARK 3 S11: -0.1984 S12: -0.1616 S13: -0.2724 REMARK 3 S21: -0.3136 S22: 0.1315 S23: -0.3618 REMARK 3 S31: 0.2765 S32: 0.2116 S33: 0.0071 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 141:149) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3312 5.8019 4.8283 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.1525 REMARK 3 T33: 0.0704 T12: -0.0331 REMARK 3 T13: -0.0352 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0372 L22: 0.7404 REMARK 3 L33: 0.0032 L12: -0.0272 REMARK 3 L13: 0.0278 L23: -0.0343 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: 0.0510 S13: 0.0727 REMARK 3 S21: 0.2088 S22: -0.0474 S23: 0.2702 REMARK 3 S31: -0.3533 S32: 0.2767 S33: 0.0005 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 150:169) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3156 1.0769 -7.5954 REMARK 3 T TENSOR REMARK 3 T11: 0.1030 T22: 0.1162 REMARK 3 T33: 0.1008 T12: -0.0035 REMARK 3 T13: -0.0008 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.4536 L22: 0.0262 REMARK 3 L33: 0.4177 L12: -0.1239 REMARK 3 L13: 0.0517 L23: -0.0297 REMARK 3 S TENSOR REMARK 3 S11: 0.0842 S12: 0.0729 S13: 0.0294 REMARK 3 S21: -0.0448 S22: -0.0133 S23: -0.1508 REMARK 3 S31: -0.0440 S32: -0.0277 S33: 0.0383 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 170:184) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2973 -3.9052 -10.5574 REMARK 3 T TENSOR REMARK 3 T11: 0.2191 T22: 0.1242 REMARK 3 T33: 0.1506 T12: -0.0376 REMARK 3 T13: -0.0462 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.2655 L22: 0.0818 REMARK 3 L33: 0.3415 L12: -0.1000 REMARK 3 L13: 0.0131 L23: 0.0416 REMARK 3 S TENSOR REMARK 3 S11: -0.0382 S12: 0.2779 S13: -0.1795 REMARK 3 S21: -0.4739 S22: 0.1643 S23: 0.2463 REMARK 3 S31: 0.1029 S32: 0.1285 S33: 0.0375 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I2L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796, 0.9793, 0.9716, REMARK 200 0.9873,1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8999 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX 1.7.2_869 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ROD SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG 4000, 0.16M NA-ACETATE, 3% REMARK 280 DIOXANE, 0.1 M TRIS-HCL, PH 8.5, VAPOR DIFFUSION, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.66250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.69050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.69050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.66250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 65 REMARK 465 ALA A 66 REMARK 465 MET A 67 REMARK 465 GLY A 68 REMARK 465 SER A 69 REMARK 465 GLY A 70 REMARK 465 GLU A 71 REMARK 465 PRO A 72 REMARK 465 GLN A 73 REMARK 465 SER A 74 REMARK 465 PRO A 75 REMARK 465 SER A 76 REMARK 465 ARG A 77 REMARK 465 ARG A 78 REMARK 465 VAL A 79 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 399 O HOH A 406 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 324 O HOH A 358 2454 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 86 66.97 -113.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 105 OD1 REMARK 620 2 ASP A 109 OD1 78.4 REMARK 620 3 PHE A 111 O 79.9 85.2 REMARK 620 4 GLU A 116 OE1 112.4 160.1 80.5 REMARK 620 5 GLU A 116 OE2 84.4 150.9 114.8 49.0 REMARK 620 6 HOH A 332 O 155.1 78.0 90.4 88.2 120.4 REMARK 620 7 HOH A 387 O 107.0 84.9 166.5 106.6 77.9 78.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD1 REMARK 620 2 ASP A 143 OD1 86.6 REMARK 620 3 ASP A 145 OD1 86.7 84.5 REMARK 620 4 LYS A 147 O 91.2 158.6 74.1 REMARK 620 5 GLU A 152 OE1 109.1 120.5 150.2 80.3 REMARK 620 6 GLU A 152 OE2 87.8 75.3 159.4 125.9 49.7 REMARK 620 7 HOH A 319 O 161.3 87.3 75.1 88.1 89.3 107.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I2O RELATED DB: PDB REMARK 900 RELATED ID: 5I2Q RELATED DB: PDB DBREF 5I2L A 70 184 UNP Q96C19 EFHD2_HUMAN 70 184 SEQADV 5I2L GLY A 65 UNP Q96C19 EXPRESSION TAG SEQADV 5I2L ALA A 66 UNP Q96C19 EXPRESSION TAG SEQADV 5I2L MET A 67 UNP Q96C19 EXPRESSION TAG SEQADV 5I2L GLY A 68 UNP Q96C19 EXPRESSION TAG SEQADV 5I2L SER A 69 UNP Q96C19 EXPRESSION TAG SEQRES 1 A 120 GLY ALA MET GLY SER GLY GLU PRO GLN SER PRO SER ARG SEQRES 2 A 120 ARG VAL PHE ASN PRO TYR THR GLU PHE LYS GLU PHE SER SEQRES 3 A 120 ARG LYS GLN ILE LYS ASP MET GLU LYS MET PHE LYS GLN SEQRES 4 A 120 TYR ASP ALA GLY ARG ASP GLY PHE ILE ASP LEU MET GLU SEQRES 5 A 120 LEU LYS LEU MET MET GLU LYS LEU GLY ALA PRO GLN THR SEQRES 6 A 120 HIS LEU GLY LEU LYS ASN MET ILE LYS GLU VAL ASP GLU SEQRES 7 A 120 ASP PHE ASP SER LYS LEU SER PHE ARG GLU PHE LEU LEU SEQRES 8 A 120 ILE PHE ARG LYS ALA ALA ALA GLY GLU LEU GLN GLU ASP SEQRES 9 A 120 SER GLY LEU CYS VAL LEU ALA ARG LEU SER GLU ILE ASP SEQRES 10 A 120 VAL SER SER HET CA A 201 1 HET CA A 202 1 HETNAM CA CALCIUM ION FORMUL 2 CA 2(CA 2+) FORMUL 4 HOH *114(H2 O) HELIX 1 AA1 ASN A 81 PHE A 86 1 6 HELIX 2 AA2 SER A 90 ASP A 105 1 16 HELIX 3 AA3 ASP A 113 GLY A 125 1 13 HELIX 4 AA4 THR A 129 ASP A 141 1 13 HELIX 5 AA5 PHE A 150 ALA A 162 1 13 HELIX 6 AA6 SER A 169 SER A 178 1 10 SHEET 1 AA1 2 PHE A 111 ILE A 112 0 SHEET 2 AA1 2 LEU A 148 SER A 149 -1 O LEU A 148 N ILE A 112 LINK OD1 ASP A 105 CA CA A 201 1555 1555 2.59 LINK OD1 ASP A 109 CA CA A 201 1555 1555 2.55 LINK O PHE A 111 CA CA A 201 1555 1555 2.55 LINK OE1 GLU A 116 CA CA A 201 1555 1555 2.64 LINK OE2 GLU A 116 CA CA A 201 1555 1555 2.72 LINK OD1 ASP A 141 CA CA A 202 1555 1555 2.56 LINK OD1 ASP A 143 CA CA A 202 1555 1555 2.55 LINK OD1 ASP A 145 CA CA A 202 1555 1555 2.56 LINK O LYS A 147 CA CA A 202 1555 1555 2.58 LINK OE1 GLU A 152 CA CA A 202 1555 1555 2.57 LINK OE2 GLU A 152 CA CA A 202 1555 1555 2.72 LINK CA CA A 201 O HOH A 332 1555 1555 2.54 LINK CA CA A 201 O HOH A 387 1555 1555 2.48 LINK CA CA A 202 O HOH A 319 1555 1555 2.57 SITE 1 AC1 6 ASP A 105 ASP A 109 PHE A 111 GLU A 116 SITE 2 AC1 6 HOH A 332 HOH A 387 SITE 1 AC2 6 ASP A 141 ASP A 143 ASP A 145 LYS A 147 SITE 2 AC2 6 GLU A 152 HOH A 319 CRYST1 37.325 50.670 53.381 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026792 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018733 0.00000