HEADER HYDROLASE 10-FEB-16 5I3M TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-12 IN COMPLEX WITH A TITLE 2 SELECTIVE SUGAR-CONJUGATED THIOUREA-LINKED CARBOXYLATE ZINC-CHELATOR TITLE 3 WATER-SOLUBLE INHIBITOR (DC31). COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROPHAGE METALLOELASTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: MME,MACROPHAGE ELASTASE,HME,MATRIX METALLOPROTEINASE-12,MMP- COMPND 5 12; COMPND 6 EC: 3.4.24.65; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: MACROPHAGE ELASTASE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL: MACROPHAGE; SOURCE 6 GENE: MMP12, HME; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, GLYCOCONJUGATE, METALLOPROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.A.STURA,L.ROSALIA,D.CUFFARO,L.TEPSHI,L.CICCONE,A.ROSSELLO REVDAT 4 10-JAN-24 5I3M 1 LINK REVDAT 3 17-AUG-16 5I3M 1 JRNL REVDAT 2 13-JUL-16 5I3M 1 JRNL REVDAT 1 06-JUL-16 5I3M 0 JRNL AUTH E.NUTI,D.CUFFARO,F.D'ANDREA,L.ROSALIA,L.TEPSHI,M.FABBI, JRNL AUTH 2 G.CARBOTTI,S.FERRINI,S.SANTAMARIA,C.CAMODECA,L.CICCONE, JRNL AUTH 3 E.ORLANDINI,S.NENCETTI,E.A.STURA,V.DIVE,A.ROSSELLO JRNL TITL SUGAR-BASED ARYLSULFONAMIDE CARBOXYLATES AS SELECTIVE AND JRNL TITL 2 WATER-SOLUBLE MATRIX METALLOPROTEINASE-12 INHIBITORS. JRNL REF CHEMMEDCHEM V. 11 1626 2016 JRNL REFN ESSN 1860-7187 JRNL PMID 27356908 JRNL DOI 10.1002/CMDC.201600235 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 30719 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1617 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.17 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2245 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 232 REMARK 3 SOLVENT ATOMS : 430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.53000 REMARK 3 B22 (A**2) : -3.80000 REMARK 3 B33 (A**2) : 4.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.98000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.380 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.181 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.178 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5350 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4855 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7259 ; 1.904 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11126 ; 1.054 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 634 ; 6.907 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 254 ;35.216 ;23.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 767 ;12.398 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.818 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 753 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6136 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1402 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2533 ; 2.939 ; 3.277 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2532 ; 2.938 ; 3.276 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3168 ; 4.228 ; 4.896 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3169 ; 4.229 ; 4.897 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2817 ; 3.680 ; 3.959 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2818 ; 3.679 ; 3.959 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4092 ; 5.652 ; 5.779 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6569 ; 8.183 ;28.804 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6430 ; 8.023 ;28.589 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5I3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32560 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 48.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.340 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 9.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.73 REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5I2Z REMARK 200 REMARK 200 REMARK: THIN FLAT PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN-LIGAND: HMMP12 F67D E219Q 465 REMARK 280 MICRO-M, 0.02M ACETOHYDROXAMIC ACID 0.5 MILLI-M INHIBITOR (DC31) REMARK 280 10% DMSO. PRECIPITANT: 32.4% PEG 4K, 8% DIOXANE, 0.2M IMIDAZOLE REMARK 280 PIPERIDINE, PH 8.5. CRYOPROTECTANT: 40% CRYOMIX:(12.5 % REMARK 280 DIETHYLENE GLYCOL + 12.5 % GLYCEROL + 12.5 % 1,2-PROPANEDIOL + REMARK 280 25 % DMSO + 25 % 1,4-DIOXANE) 12% PEG 4K, 10% DIOXANE, 0.1 M REMARK 280 IMIDAZOLE PIPERIDINE PH 8.5., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.57000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 105 REMARK 465 GLY A 106 REMARK 465 MET B 105 REMARK 465 GLY B 106 REMARK 465 MET C 105 REMARK 465 GLY C 106 REMARK 465 MET D 105 REMARK 465 GLY D 106 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP C 170 ZN ZN C 303 1.68 REMARK 500 O19 67F D 301 ZN ZN D 302 1.69 REMARK 500 O HOH C 442 O HOH C 514 2.07 REMARK 500 OH TYR D 113 O HOH D 401 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 457 O HOH C 504 2445 2.11 REMARK 500 O HOH A 469 O HOH C 409 1655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 198 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 168 28.76 -142.37 REMARK 500 HIS A 206 -136.73 -110.47 REMARK 500 ARG B 110 41.57 -103.15 REMARK 500 HIS B 168 22.60 -141.75 REMARK 500 HIS B 206 -134.40 -122.45 REMARK 500 ARG C 110 31.77 -91.68 REMARK 500 HIS C 206 -123.02 -121.04 REMARK 500 ARG D 110 41.75 -83.35 REMARK 500 HIS D 168 25.23 -146.12 REMARK 500 ALA D 182 161.78 179.32 REMARK 500 HIS D 206 -126.56 -116.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 508 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A 509 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH D 497 DISTANCE = 6.41 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 124 OD1 REMARK 620 2 ASP A 124 OD2 50.9 REMARK 620 3 GLU A 199 O 156.7 136.1 REMARK 620 4 GLU A 199 OE2 81.3 85.5 77.7 REMARK 620 5 GLU A 201 O 121.3 76.4 79.2 122.7 REMARK 620 6 HOH A 452 O 87.5 98.3 110.1 162.1 75.2 REMARK 620 7 HOH A 462 O 86.8 137.4 80.8 83.4 142.2 82.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 158 O REMARK 620 2 GLY A 190 O 167.1 REMARK 620 3 GLY A 192 O 96.6 94.6 REMARK 620 4 ASP A 194 OD1 91.1 95.1 90.7 REMARK 620 5 HOH A 403 O 88.1 87.8 79.6 170.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 168 NE2 REMARK 620 2 ASP A 170 OD2 112.8 REMARK 620 3 HIS A 183 NE2 112.2 111.4 REMARK 620 4 HIS A 196 ND1 107.4 104.2 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 175 OD1 REMARK 620 2 GLY A 176 O 82.6 REMARK 620 3 GLY A 178 O 93.8 91.1 REMARK 620 4 ILE A 180 O 90.2 170.0 82.4 REMARK 620 5 ASP A 198 OD2 95.1 89.8 171.1 97.8 REMARK 620 6 GLU A 201 OE2 171.5 101.2 78.6 84.9 92.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 218 NE2 REMARK 620 2 HIS A 222 NE2 111.9 REMARK 620 3 HIS A 228 NE2 108.5 95.0 REMARK 620 4 67F A 301 O19 108.7 127.2 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD1 REMARK 620 2 ASP B 124 OD2 53.9 REMARK 620 3 GLU B 199 O 159.5 140.2 REMARK 620 4 GLU B 199 OE2 82.5 87.4 83.6 REMARK 620 5 GLU B 201 O 126.2 78.0 74.1 121.3 REMARK 620 6 HOH B 467 O 85.3 99.3 103.0 158.9 79.7 REMARK 620 7 HOH B 471 O 78.5 131.4 83.7 76.2 148.9 84.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 158 O REMARK 620 2 GLY B 190 O 161.0 REMARK 620 3 GLY B 192 O 100.8 93.7 REMARK 620 4 ASP B 194 OD1 91.8 100.9 88.5 REMARK 620 5 HOH B 430 O 83.5 86.6 81.7 168.1 REMARK 620 6 HOH B 444 O 82.8 81.9 174.4 95.6 94.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 168 NE2 REMARK 620 2 ASP B 170 OD2 91.5 REMARK 620 3 HIS B 183 NE2 112.8 139.2 REMARK 620 4 HIS B 196 ND1 101.7 89.0 115.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 175 OD1 REMARK 620 2 GLY B 176 O 89.0 REMARK 620 3 GLY B 178 O 83.4 83.0 REMARK 620 4 ILE B 180 O 84.4 173.2 97.8 REMARK 620 5 ASP B 198 OD2 93.9 85.6 168.3 93.3 REMARK 620 6 GLU B 201 OE2 174.0 87.4 91.4 99.4 90.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 218 NE2 REMARK 620 2 HIS B 222 NE2 102.7 REMARK 620 3 HIS B 228 NE2 118.5 117.5 REMARK 620 4 67F B 301 O19 105.1 118.9 94.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 124 OD1 REMARK 620 2 ASP C 124 OD2 52.9 REMARK 620 3 GLU C 199 O 159.5 135.8 REMARK 620 4 GLU C 199 OE2 81.1 83.8 81.8 REMARK 620 5 GLU C 201 O 124.7 79.1 74.6 123.2 REMARK 620 6 HOH C 468 O 86.9 99.5 106.7 162.1 74.6 REMARK 620 7 HOH C 469 O 85.9 138.6 81.9 86.8 137.4 79.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 158 O REMARK 620 2 GLY C 190 O 168.7 REMARK 620 3 GLY C 192 O 92.7 89.8 REMARK 620 4 ASP C 194 OD1 95.6 95.5 86.7 REMARK 620 5 HOH C 410 O 89.9 86.0 171.0 101.5 REMARK 620 6 HOH C 437 O 80.2 89.4 80.1 165.9 92.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 168 NE2 REMARK 620 2 HIS C 183 NE2 119.1 REMARK 620 3 HIS C 196 ND1 104.4 108.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 175 OD1 REMARK 620 2 GLY C 176 O 87.8 REMARK 620 3 GLY C 178 O 88.9 82.9 REMARK 620 4 ILE C 180 O 86.1 172.2 101.8 REMARK 620 5 ASP C 198 OD2 96.8 79.5 161.3 96.3 REMARK 620 6 GLU C 201 OE2 164.9 107.3 91.6 79.0 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 218 NE2 REMARK 620 2 HIS C 222 NE2 109.7 REMARK 620 3 HIS C 228 NE2 110.2 95.3 REMARK 620 4 67F C 301 O20 88.8 118.8 133.1 REMARK 620 5 67F C 301 O19 131.0 114.9 85.3 52.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 124 OD1 REMARK 620 2 ASP D 124 OD2 50.0 REMARK 620 3 GLU D 199 O 167.4 129.3 REMARK 620 4 GLU D 199 OE2 88.1 85.1 79.5 REMARK 620 5 GLU D 201 O 116.5 75.7 72.1 121.0 REMARK 620 6 HOH D 429 O 86.7 135.0 90.0 81.7 146.2 REMARK 620 7 HOH D 450 O 84.2 101.5 107.3 162.7 76.2 82.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 158 O REMARK 620 2 GLY D 190 O 170.5 REMARK 620 3 GLY D 192 O 93.6 94.0 REMARK 620 4 ASP D 194 OD1 83.6 103.3 79.8 REMARK 620 5 HOH D 415 O 87.5 87.1 87.8 164.3 REMARK 620 6 HOH D 440 O 92.2 79.4 169.2 109.8 83.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 168 NE2 REMARK 620 2 ASP D 170 OD2 106.7 REMARK 620 3 HIS D 196 ND1 112.5 92.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 175 OD1 REMARK 620 2 GLY D 176 O 81.1 REMARK 620 3 GLY D 178 O 81.7 88.7 REMARK 620 4 ILE D 180 O 90.9 170.5 95.0 REMARK 620 5 ASP D 198 OD2 101.9 90.5 176.1 86.3 REMARK 620 6 GLU D 201 OE2 168.6 95.2 87.5 93.6 88.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 218 NE2 REMARK 620 2 HIS D 222 NE2 110.1 REMARK 620 3 HIS D 228 NE2 117.7 93.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 67F A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 67F B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 67F C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO C 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 67F D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS D 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I2Z RELATED DB: PDB REMARK 900 SAME PROTEIN WITH RELATED LIGAND REMARK 900 RELATED ID: 5IOL RELATED DB: PDB REMARK 900 SAME PROTEIN WITH RELATED LIGAND REMARK 900 RELATED ID: 5I12 RELATED DB: PDB REMARK 900 MMP-9 WITH RELATED LIGAND DBREF 5I3M A 106 263 UNP P39900 MMP12_HUMAN 106 263 DBREF 5I3M B 106 263 UNP P39900 MMP12_HUMAN 106 263 DBREF 5I3M C 106 263 UNP P39900 MMP12_HUMAN 106 263 DBREF 5I3M D 106 263 UNP P39900 MMP12_HUMAN 106 263 SEQADV 5I3M MET A 105 UNP P39900 INITIATING METHIONINE SEQADV 5I3M ASP A 171 UNP P39900 PHE 171 ENGINEERED MUTATION SEQADV 5I3M GLN A 219 UNP P39900 GLU 219 ENGINEERED MUTATION SEQADV 5I3M MET B 105 UNP P39900 INITIATING METHIONINE SEQADV 5I3M ASP B 171 UNP P39900 PHE 171 ENGINEERED MUTATION SEQADV 5I3M GLN B 219 UNP P39900 GLU 219 ENGINEERED MUTATION SEQADV 5I3M MET C 105 UNP P39900 INITIATING METHIONINE SEQADV 5I3M ASP C 171 UNP P39900 PHE 171 ENGINEERED MUTATION SEQADV 5I3M GLN C 219 UNP P39900 GLU 219 ENGINEERED MUTATION SEQADV 5I3M MET D 105 UNP P39900 INITIATING METHIONINE SEQADV 5I3M ASP D 171 UNP P39900 PHE 171 ENGINEERED MUTATION SEQADV 5I3M GLN D 219 UNP P39900 GLU 219 ENGINEERED MUTATION SEQRES 1 A 159 MET GLY PRO VAL TRP ARG LYS HIS TYR ILE THR TYR ARG SEQRES 2 A 159 ILE ASN ASN TYR THR PRO ASP MET ASN ARG GLU ASP VAL SEQRES 3 A 159 ASP TYR ALA ILE ARG LYS ALA PHE GLN VAL TRP SER ASN SEQRES 4 A 159 VAL THR PRO LEU LYS PHE SER LYS ILE ASN THR GLY MET SEQRES 5 A 159 ALA ASP ILE LEU VAL VAL PHE ALA ARG GLY ALA HIS GLY SEQRES 6 A 159 ASP ASP HIS ALA PHE ASP GLY LYS GLY GLY ILE LEU ALA SEQRES 7 A 159 HIS ALA PHE GLY PRO GLY SER GLY ILE GLY GLY ASP ALA SEQRES 8 A 159 HIS PHE ASP GLU ASP GLU PHE TRP THR THR HIS SER GLY SEQRES 9 A 159 GLY THR ASN LEU PHE LEU THR ALA VAL HIS GLN ILE GLY SEQRES 10 A 159 HIS SER LEU GLY LEU GLY HIS SER SER ASP PRO LYS ALA SEQRES 11 A 159 VAL MET PHE PRO THR TYR LYS TYR VAL ASP ILE ASN THR SEQRES 12 A 159 PHE ARG LEU SER ALA ASP ASP ILE ARG GLY ILE GLN SER SEQRES 13 A 159 LEU TYR GLY SEQRES 1 B 159 MET GLY PRO VAL TRP ARG LYS HIS TYR ILE THR TYR ARG SEQRES 2 B 159 ILE ASN ASN TYR THR PRO ASP MET ASN ARG GLU ASP VAL SEQRES 3 B 159 ASP TYR ALA ILE ARG LYS ALA PHE GLN VAL TRP SER ASN SEQRES 4 B 159 VAL THR PRO LEU LYS PHE SER LYS ILE ASN THR GLY MET SEQRES 5 B 159 ALA ASP ILE LEU VAL VAL PHE ALA ARG GLY ALA HIS GLY SEQRES 6 B 159 ASP ASP HIS ALA PHE ASP GLY LYS GLY GLY ILE LEU ALA SEQRES 7 B 159 HIS ALA PHE GLY PRO GLY SER GLY ILE GLY GLY ASP ALA SEQRES 8 B 159 HIS PHE ASP GLU ASP GLU PHE TRP THR THR HIS SER GLY SEQRES 9 B 159 GLY THR ASN LEU PHE LEU THR ALA VAL HIS GLN ILE GLY SEQRES 10 B 159 HIS SER LEU GLY LEU GLY HIS SER SER ASP PRO LYS ALA SEQRES 11 B 159 VAL MET PHE PRO THR TYR LYS TYR VAL ASP ILE ASN THR SEQRES 12 B 159 PHE ARG LEU SER ALA ASP ASP ILE ARG GLY ILE GLN SER SEQRES 13 B 159 LEU TYR GLY SEQRES 1 C 159 MET GLY PRO VAL TRP ARG LYS HIS TYR ILE THR TYR ARG SEQRES 2 C 159 ILE ASN ASN TYR THR PRO ASP MET ASN ARG GLU ASP VAL SEQRES 3 C 159 ASP TYR ALA ILE ARG LYS ALA PHE GLN VAL TRP SER ASN SEQRES 4 C 159 VAL THR PRO LEU LYS PHE SER LYS ILE ASN THR GLY MET SEQRES 5 C 159 ALA ASP ILE LEU VAL VAL PHE ALA ARG GLY ALA HIS GLY SEQRES 6 C 159 ASP ASP HIS ALA PHE ASP GLY LYS GLY GLY ILE LEU ALA SEQRES 7 C 159 HIS ALA PHE GLY PRO GLY SER GLY ILE GLY GLY ASP ALA SEQRES 8 C 159 HIS PHE ASP GLU ASP GLU PHE TRP THR THR HIS SER GLY SEQRES 9 C 159 GLY THR ASN LEU PHE LEU THR ALA VAL HIS GLN ILE GLY SEQRES 10 C 159 HIS SER LEU GLY LEU GLY HIS SER SER ASP PRO LYS ALA SEQRES 11 C 159 VAL MET PHE PRO THR TYR LYS TYR VAL ASP ILE ASN THR SEQRES 12 C 159 PHE ARG LEU SER ALA ASP ASP ILE ARG GLY ILE GLN SER SEQRES 13 C 159 LEU TYR GLY SEQRES 1 D 159 MET GLY PRO VAL TRP ARG LYS HIS TYR ILE THR TYR ARG SEQRES 2 D 159 ILE ASN ASN TYR THR PRO ASP MET ASN ARG GLU ASP VAL SEQRES 3 D 159 ASP TYR ALA ILE ARG LYS ALA PHE GLN VAL TRP SER ASN SEQRES 4 D 159 VAL THR PRO LEU LYS PHE SER LYS ILE ASN THR GLY MET SEQRES 5 D 159 ALA ASP ILE LEU VAL VAL PHE ALA ARG GLY ALA HIS GLY SEQRES 6 D 159 ASP ASP HIS ALA PHE ASP GLY LYS GLY GLY ILE LEU ALA SEQRES 7 D 159 HIS ALA PHE GLY PRO GLY SER GLY ILE GLY GLY ASP ALA SEQRES 8 D 159 HIS PHE ASP GLU ASP GLU PHE TRP THR THR HIS SER GLY SEQRES 9 D 159 GLY THR ASN LEU PHE LEU THR ALA VAL HIS GLN ILE GLY SEQRES 10 D 159 HIS SER LEU GLY LEU GLY HIS SER SER ASP PRO LYS ALA SEQRES 11 D 159 VAL MET PHE PRO THR TYR LYS TYR VAL ASP ILE ASN THR SEQRES 12 D 159 PHE ARG LEU SER ALA ASP ASP ILE ARG GLY ILE GLN SER SEQRES 13 D 159 LEU TYR GLY HET 67F A 301 43 HET ZN A 302 1 HET ZN A 303 1 HET CA A 304 1 HET CA A 305 1 HET CA A 306 1 HET DMS A 307 4 HET PGO A 308 5 HET 67F B 301 43 HET ZN B 302 1 HET ZN B 303 1 HET CA B 304 1 HET CA B 305 1 HET CA B 306 1 HET PGO B 307 5 HET DIO B 308 6 HET DIO B 309 6 HET 67F C 301 43 HET ZN C 302 1 HET ZN C 303 1 HET CA C 304 1 HET CA C 305 1 HET CA C 306 1 HET EDO C 307 4 HET DIO C 308 6 HET 67F D 301 43 HET ZN D 302 1 HET ZN D 303 1 HET CA D 304 1 HET CA D 305 1 HET CA D 306 1 HET DMS D 307 4 HETNAM 67F (2S)-2-{[2-({[(2R,3R,4R,5S,6R)-3-(ACETYLAMINO)-4,5- HETNAM 2 67F DIHYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2- HETNAM 3 67F YL]CARBAMOTHIOYL}AMINO)ETHYL](BIPHENYL-4-YLSULFONYL) HETNAM 4 67F AMINO}-3-METHYLBUTANOIC ACID (NON-PREFERRED NAME) HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM PGO S-1,2-PROPANEDIOL HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 67F 4(C28 H38 N4 O9 S2) FORMUL 6 ZN 8(ZN 2+) FORMUL 8 CA 12(CA 2+) FORMUL 11 DMS 2(C2 H6 O S) FORMUL 12 PGO 2(C3 H8 O2) FORMUL 20 DIO 3(C4 H8 O2) FORMUL 28 EDO C2 H6 O2 FORMUL 37 HOH *430(H2 O) HELIX 1 AA1 ASN A 126 ASN A 143 1 18 HELIX 2 AA2 LEU A 212 LEU A 224 1 13 HELIX 3 AA3 ASP A 244 PHE A 248 5 5 HELIX 4 AA4 SER A 251 GLY A 263 1 13 HELIX 5 AA5 ASN B 126 ASN B 143 1 18 HELIX 6 AA6 LEU B 212 GLY B 225 1 14 HELIX 7 AA7 ASP B 244 PHE B 248 5 5 HELIX 8 AA8 SER B 251 GLY B 263 1 13 HELIX 9 AA9 ASN C 126 ASN C 143 1 18 HELIX 10 AB1 LEU C 212 GLY C 225 1 14 HELIX 11 AB2 ASP C 244 PHE C 248 5 5 HELIX 12 AB3 SER C 251 GLY C 263 1 13 HELIX 13 AB4 ASN D 126 ASN D 143 1 18 HELIX 14 AB5 LEU D 212 GLY D 225 1 14 HELIX 15 AB6 ASP D 244 PHE D 248 5 5 HELIX 16 AB7 SER D 251 TYR D 262 1 12 SHEET 1 AA1 5 LYS A 148 LYS A 151 0 SHEET 2 AA1 5 TYR A 113 ILE A 118 1 N ILE A 114 O LYS A 148 SHEET 3 AA1 5 ILE A 159 ALA A 164 1 O VAL A 161 N ARG A 117 SHEET 4 AA1 5 ALA A 195 ASP A 198 1 O PHE A 197 N VAL A 162 SHEET 5 AA1 5 ALA A 182 ALA A 184 -1 N HIS A 183 O HIS A 196 SHEET 1 AA2 2 TRP A 203 THR A 204 0 SHEET 2 AA2 2 THR A 210 ASN A 211 1 O THR A 210 N THR A 204 SHEET 1 AA3 5 LYS B 148 LYS B 151 0 SHEET 2 AA3 5 TYR B 113 ILE B 118 1 N ILE B 114 O LYS B 148 SHEET 3 AA3 5 ILE B 159 ALA B 164 1 O ILE B 159 N THR B 115 SHEET 4 AA3 5 ALA B 195 ASP B 198 1 O PHE B 197 N VAL B 162 SHEET 5 AA3 5 ALA B 182 ALA B 184 -1 N HIS B 183 O HIS B 196 SHEET 1 AA4 2 TRP B 203 THR B 204 0 SHEET 2 AA4 2 THR B 210 ASN B 211 1 O THR B 210 N THR B 204 SHEET 1 AA5 5 LYS C 148 LYS C 151 0 SHEET 2 AA5 5 TYR C 113 ILE C 118 1 N ILE C 114 O LYS C 148 SHEET 3 AA5 5 ILE C 159 ALA C 164 1 O VAL C 161 N ARG C 117 SHEET 4 AA5 5 ALA C 195 ASP C 198 1 O PHE C 197 N VAL C 162 SHEET 5 AA5 5 ALA C 182 ALA C 184 -1 N HIS C 183 O HIS C 196 SHEET 1 AA6 2 TRP C 203 THR C 204 0 SHEET 2 AA6 2 THR C 210 ASN C 211 1 O THR C 210 N THR C 204 SHEET 1 AA7 5 LYS D 148 LYS D 151 0 SHEET 2 AA7 5 TYR D 113 ILE D 118 1 N ILE D 114 O LYS D 148 SHEET 3 AA7 5 ILE D 159 ALA D 164 1 O VAL D 161 N ARG D 117 SHEET 4 AA7 5 ALA D 195 ASP D 198 1 O PHE D 197 N VAL D 162 SHEET 5 AA7 5 ALA D 182 ALA D 184 -1 N HIS D 183 O HIS D 196 SHEET 1 AA8 2 TRP D 203 THR D 204 0 SHEET 2 AA8 2 THR D 210 ASN D 211 1 O THR D 210 N THR D 204 LINK OD1 ASP A 124 CA CA A 305 1555 1555 2.60 LINK OD2 ASP A 124 CA CA A 305 1555 1555 2.38 LINK O ASP A 158 CA CA A 304 1555 1555 2.33 LINK NE2 HIS A 168 ZN ZN A 303 1555 1555 2.11 LINK OD2 ASP A 170 ZN ZN A 303 1555 1555 1.92 LINK OD1 ASP A 175 CA CA A 306 1555 1555 2.25 LINK O GLY A 176 CA CA A 306 1555 1555 2.18 LINK O GLY A 178 CA CA A 306 1555 1555 2.26 LINK O ILE A 180 CA CA A 306 1555 1555 2.28 LINK NE2 HIS A 183 ZN ZN A 303 1555 1555 2.25 LINK O GLY A 190 CA CA A 304 1555 1555 2.25 LINK O GLY A 192 CA CA A 304 1555 1555 2.21 LINK OD1 ASP A 194 CA CA A 304 1555 1555 2.47 LINK ND1 HIS A 196 ZN ZN A 303 1555 1555 2.05 LINK OD2 ASP A 198 CA CA A 306 1555 1555 2.24 LINK O GLU A 199 CA CA A 305 1555 1555 2.32 LINK OE2 GLU A 199 CA CA A 305 1555 1555 2.48 LINK O GLU A 201 CA CA A 305 1555 1555 2.41 LINK OE2 GLU A 201 CA CA A 306 1555 1555 2.37 LINK NE2 HIS A 218 ZN ZN A 302 1555 1555 2.08 LINK NE2 HIS A 222 ZN ZN A 302 1555 1555 2.07 LINK NE2 HIS A 228 ZN ZN A 302 1555 1555 2.17 LINK O19 67F A 301 ZN ZN A 302 1555 1555 1.90 LINK CA CA A 304 O HOH A 403 1555 1555 2.51 LINK CA CA A 305 O HOH A 452 1555 1555 2.34 LINK CA CA A 305 O HOH A 462 1555 1555 2.32 LINK OD1 ASP B 124 CA CA B 305 1555 1555 2.52 LINK OD2 ASP B 124 CA CA B 305 1555 1555 2.25 LINK O ASP B 158 CA CA B 304 1555 1555 2.28 LINK NE2 HIS B 168 ZN ZN B 303 1555 1555 2.22 LINK OD2 ASP B 170 ZN ZN B 303 1555 1555 1.81 LINK OD1 ASP B 175 CA CA B 306 1555 1555 2.31 LINK O GLY B 176 CA CA B 306 1555 1555 2.22 LINK O GLY B 178 CA CA B 306 1555 1555 2.35 LINK O ILE B 180 CA CA B 306 1555 1555 2.30 LINK NE2 HIS B 183 ZN ZN B 303 1555 1555 1.97 LINK O GLY B 190 CA CA B 304 1555 1555 2.32 LINK O GLY B 192 CA CA B 304 1555 1555 2.11 LINK OD1 ASP B 194 CA CA B 304 1555 1555 2.42 LINK ND1 HIS B 196 ZN ZN B 303 1555 1555 2.06 LINK OD2 ASP B 198 CA CA B 306 1555 1555 2.40 LINK O GLU B 199 CA CA B 305 1555 1555 2.16 LINK OE2 GLU B 199 CA CA B 305 1555 1555 2.36 LINK O GLU B 201 CA CA B 305 1555 1555 2.36 LINK OE2 GLU B 201 CA CA B 306 1555 1555 2.27 LINK NE2 HIS B 218 ZN ZN B 302 1555 1555 2.01 LINK NE2 HIS B 222 ZN ZN B 302 1555 1555 2.08 LINK NE2 HIS B 228 ZN ZN B 302 1555 1555 2.24 LINK O19 67F B 301 ZN ZN B 302 1555 1555 1.88 LINK CA CA B 304 O HOH B 430 1555 1555 2.51 LINK CA CA B 304 O HOH B 444 1555 1555 2.13 LINK CA CA B 305 O HOH B 467 1555 1555 2.43 LINK CA CA B 305 O HOH B 471 1555 1555 2.67 LINK OD1 ASP C 124 CA CA C 305 1555 1555 2.52 LINK OD2 ASP C 124 CA CA C 305 1555 1555 2.39 LINK O ASP C 158 CA CA C 304 1555 1555 2.33 LINK NE2 HIS C 168 ZN ZN C 303 1555 1555 2.05 LINK OD1 ASP C 175 CA CA C 306 1555 1555 2.28 LINK O GLY C 176 CA CA C 306 1555 1555 2.23 LINK O GLY C 178 CA CA C 306 1555 1555 2.18 LINK O ILE C 180 CA CA C 306 1555 1555 2.32 LINK NE2 HIS C 183 ZN ZN C 303 1555 1555 2.02 LINK O GLY C 190 CA CA C 304 1555 1555 2.36 LINK O GLY C 192 CA CA C 304 1555 1555 2.19 LINK OD1 ASP C 194 CA CA C 304 1555 1555 2.38 LINK ND1 HIS C 196 ZN ZN C 303 1555 1555 2.11 LINK OD2 ASP C 198 CA CA C 306 1555 1555 2.46 LINK O GLU C 199 CA CA C 305 1555 1555 2.22 LINK OE2 GLU C 199 CA CA C 305 1555 1555 2.30 LINK O GLU C 201 CA CA C 305 1555 1555 2.37 LINK OE2 GLU C 201 CA CA C 306 1555 1555 2.36 LINK NE2 HIS C 218 ZN ZN C 302 1555 1555 2.15 LINK NE2 HIS C 222 ZN ZN C 302 1555 1555 2.08 LINK NE2 HIS C 228 ZN ZN C 302 1555 1555 2.27 LINK O20 67F C 301 ZN ZN C 302 1555 1555 2.61 LINK O19 67F C 301 ZN ZN C 302 1555 1555 1.81 LINK CA CA C 304 O HOH C 410 1555 1555 2.28 LINK CA CA C 304 O HOH C 437 1555 1555 2.44 LINK CA CA C 305 O HOH C 468 1555 1555 2.53 LINK CA CA C 305 O HOH C 469 1555 1555 2.36 LINK OD1 ASP D 124 CA CA D 305 1555 1555 2.60 LINK OD2 ASP D 124 CA CA D 305 1555 1555 2.57 LINK O ASP D 158 CA CA D 304 1555 1555 2.29 LINK NE2 HIS D 168 ZN ZN D 303 1555 1555 2.16 LINK OD2 ASP D 170 ZN ZN D 303 1555 1555 1.92 LINK OD1 ASP D 175 CA CA D 306 1555 1555 2.15 LINK O GLY D 176 CA CA D 306 1555 1555 2.18 LINK O GLY D 178 CA CA D 306 1555 1555 2.40 LINK O ILE D 180 CA CA D 306 1555 1555 2.39 LINK O GLY D 190 CA CA D 304 1555 1555 2.27 LINK O GLY D 192 CA CA D 304 1555 1555 2.38 LINK OD1 ASP D 194 CA CA D 304 1555 1555 2.48 LINK ND1 HIS D 196 ZN ZN D 303 1555 1555 2.02 LINK OD2 ASP D 198 CA CA D 306 1555 1555 2.24 LINK O GLU D 199 CA CA D 305 1555 1555 2.18 LINK OE2 GLU D 199 CA CA D 305 1555 1555 2.44 LINK O GLU D 201 CA CA D 305 1555 1555 2.48 LINK OE2 GLU D 201 CA CA D 306 1555 1555 2.15 LINK NE2 HIS D 218 ZN ZN D 302 1555 1555 2.23 LINK NE2 HIS D 222 ZN ZN D 302 1555 1555 2.15 LINK NE2 HIS D 228 ZN ZN D 302 1555 1555 2.18 LINK CA CA D 304 O HOH D 415 1555 1555 2.39 LINK CA CA D 304 O HOH D 440 1555 1555 2.16 LINK CA CA D 305 O HOH D 429 1555 1555 2.75 LINK CA CA D 305 O HOH D 450 1555 1555 2.22 SITE 1 AC1 17 ILE A 180 LEU A 181 ALA A 182 HIS A 183 SITE 2 AC1 17 LEU A 214 HIS A 218 GLN A 219 HIS A 222 SITE 3 AC1 17 HIS A 228 VAL A 235 PHE A 237 PRO A 238 SITE 4 AC1 17 THR A 239 TYR A 240 ZN A 302 HOH A 455 SITE 5 AC1 17 GLU C 128 SITE 1 AC2 4 HIS A 218 HIS A 222 HIS A 228 67F A 301 SITE 1 AC3 4 HIS A 168 ASP A 170 HIS A 183 HIS A 196 SITE 1 AC4 5 ASP A 158 GLY A 190 GLY A 192 ASP A 194 SITE 2 AC4 5 HOH A 403 SITE 1 AC5 5 ASP A 124 GLU A 199 GLU A 201 HOH A 452 SITE 2 AC5 5 HOH A 462 SITE 1 AC6 6 ASP A 175 GLY A 176 GLY A 178 ILE A 180 SITE 2 AC6 6 ASP A 198 GLU A 201 SITE 1 AC7 2 HIS A 172 PHE A 185 SITE 1 AC8 5 LYS A 136 THR A 205 PHE A 213 HOH A 439 SITE 2 AC8 5 HOH A 472 SITE 1 AC9 17 ILE B 180 LEU B 181 ALA B 182 HIS B 183 SITE 2 AC9 17 LEU B 214 THR B 215 HIS B 218 GLN B 219 SITE 3 AC9 17 HIS B 222 HIS B 228 VAL B 235 PHE B 237 SITE 4 AC9 17 PRO B 238 TYR B 240 ZN B 302 HOH B 450 SITE 5 AC9 17 ASP D 231 SITE 1 AD1 4 HIS B 218 HIS B 222 HIS B 228 67F B 301 SITE 1 AD2 4 HIS B 168 ASP B 170 HIS B 183 HIS B 196 SITE 1 AD3 6 ASP B 158 GLY B 190 GLY B 192 ASP B 194 SITE 2 AD3 6 HOH B 430 HOH B 444 SITE 1 AD4 5 ASP B 124 GLU B 199 GLU B 201 HOH B 467 SITE 2 AD4 5 HOH B 471 SITE 1 AD5 6 ASP B 175 GLY B 176 GLY B 178 ILE B 180 SITE 2 AD5 6 ASP B 198 GLU B 201 SITE 1 AD6 3 LEU B 226 SER B 229 ASP B 253 SITE 1 AD7 2 ALA B 184 PHE B 185 SITE 1 AD8 3 ALA B 133 THR B 205 HOH B 442 SITE 1 AD9 19 ARG A 135 ASP C 175 GLY C 179 ILE C 180 SITE 2 AD9 19 LEU C 181 ALA C 182 HIS C 183 LEU C 214 SITE 3 AD9 19 HIS C 218 GLN C 219 HIS C 222 HIS C 228 SITE 4 AD9 19 VAL C 235 PHE C 237 PRO C 238 TYR C 240 SITE 5 AD9 19 ZN C 302 HOH C 409 HOH C 420 SITE 1 AE1 4 HIS C 218 HIS C 222 HIS C 228 67F C 301 SITE 1 AE2 4 HIS C 168 ASP C 170 HIS C 183 HIS C 196 SITE 1 AE3 6 ASP C 158 GLY C 190 GLY C 192 ASP C 194 SITE 2 AE3 6 HOH C 410 HOH C 437 SITE 1 AE4 5 ASP C 124 GLU C 199 GLU C 201 HOH C 468 SITE 2 AE4 5 HOH C 469 SITE 1 AE5 6 ASP C 175 GLY C 176 GLY C 178 ILE C 180 SITE 2 AE5 6 ASP C 198 GLU C 201 SITE 1 AE6 6 THR C 205 PHE C 213 ILE C 245 HOH C 407 SITE 2 AE6 6 HOH C 435 HOH C 470 SITE 1 AE7 4 HIS C 183 ALA C 184 PHE C 185 HOH C 431 SITE 1 AE8 19 PRO B 232 HOH B 423 ILE D 180 LEU D 181 SITE 2 AE8 19 ALA D 182 HIS D 183 LEU D 214 HIS D 218 SITE 3 AE8 19 GLN D 219 HIS D 222 HIS D 228 VAL D 235 SITE 4 AE8 19 PHE D 237 PRO D 238 THR D 239 TYR D 240 SITE 5 AE8 19 ZN D 302 DMS D 307 HOH D 486 SITE 1 AE9 4 HIS D 218 HIS D 222 HIS D 228 67F D 301 SITE 1 AF1 4 HIS D 168 ASP D 170 HIS D 183 HIS D 196 SITE 1 AF2 6 ASP D 158 GLY D 190 GLY D 192 ASP D 194 SITE 2 AF2 6 HOH D 415 HOH D 440 SITE 1 AF3 5 ASP D 124 GLU D 199 GLU D 201 HOH D 429 SITE 2 AF3 5 HOH D 450 SITE 1 AF4 6 ASP D 175 GLY D 176 GLY D 178 ILE D 180 SITE 2 AF4 6 ASP D 198 GLU D 201 SITE 1 AF5 3 HIS D 172 ALA D 184 67F D 301 CRYST1 63.720 63.140 78.920 90.00 103.09 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015694 0.000000 0.003649 0.00000 SCALE2 0.000000 0.015838 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013009 0.00000