HEADER METAL BINDING PROTEIN 12-FEB-16 5I4K TITLE METAL ABC TRANSPORTER FROM LISTERIA MONOCYTOGENES WITH MANGANESE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANGANESE-BINDING LIPOPROTEIN MNTA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES EGD-E; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: ATCC BAA-679 / EGD-E; SOURCE 5 GENE: MNTA, LMO1847; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, IDP02508, METAL ABC TRANSPORTER, MANGANESE, KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, METAL KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,M.ZHOU,S.GRIMSHAW,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 11-DEC-19 5I4K 1 REMARK REVDAT 2 20-SEP-17 5I4K 1 REMARK REVDAT 1 24-FEB-16 5I4K 0 JRNL AUTH J.OSIPIUK,M.ZHOU,S.GRIMSHAW,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL METAL ABC TRANSPORTER FROM LISTERIA MONOCYTOGENES WITH JRNL TITL 2 MANGANESE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 24530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1225 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1344 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2204 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81000 REMARK 3 B22 (A**2) : -0.52000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.973 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2308 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2209 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3136 ; 1.424 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5134 ; 0.778 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 296 ; 6.171 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;33.875 ;26.091 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 410 ;13.920 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;10.090 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 347 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2630 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 483 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 1.529 ; 2.008 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1136 ; 1.510 ; 2.005 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1424 ; 2.351 ; 3.002 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 48.4838 27.4851 46.5028 REMARK 3 T TENSOR REMARK 3 T11: 0.0355 T22: 0.0157 REMARK 3 T33: 0.0152 T12: -0.0179 REMARK 3 T13: -0.0208 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.2625 L22: 0.8827 REMARK 3 L33: 0.1352 L12: 0.0887 REMARK 3 L13: 0.0426 L23: -0.0192 REMARK 3 S TENSOR REMARK 3 S11: -0.0380 S12: -0.0157 S13: 0.0277 REMARK 3 S21: -0.1338 S22: 0.0628 S23: 0.0606 REMARK 3 S31: 0.0149 S32: -0.0095 S33: -0.0248 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5I4K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218235. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25812 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 32.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.87200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 8000, 0.2 M MANGANESE REMARK 280 CHLORIDE, 0.1 M TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.95300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.74600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.15550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.74600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.95300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.15550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 ALA A 23 REMARK 465 SER A 24 REMARK 465 ASP A 25 REMARK 465 SER A 26 REMARK 465 LYS A 27 REMARK 465 LYS A 28 REMARK 465 THR A 29 REMARK 465 ASP A 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 153 O HOH A 601 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 59 -63.89 -96.55 REMARK 500 HIS A 140 48.43 -84.52 REMARK 500 THR A 280 -73.21 -120.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 NE2 REMARK 620 2 HIS A 140 NE2 103.1 REMARK 620 3 GLU A 206 OE1 136.5 94.7 REMARK 620 4 GLU A 206 OE2 85.7 88.8 55.0 REMARK 620 5 ASP A 281 OD1 111.8 86.5 108.6 162.4 REMARK 620 6 ASP A 281 OD2 92.7 142.3 96.9 126.8 55.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 291 OD1 REMARK 620 2 GLU A 295 OE1 82.5 REMARK 620 3 GLU A 295 OE2 101.6 50.8 REMARK 620 4 HOH A 623 O 95.1 114.5 66.2 REMARK 620 5 HOH A 724 O 91.0 78.7 124.7 166.1 REMARK 620 6 HOH A 637 O 91.6 158.8 150.2 86.2 81.1 REMARK 620 7 HOH A 779 O 171.0 103.4 87.5 88.7 83.6 80.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP02508 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 5HX7 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, APO-FORM DBREF 5I4K A 24 310 UNP Q8Y653 MNTA_LISMO 24 310 SEQADV 5I4K SER A 21 UNP Q8Y653 EXPRESSION TAG SEQADV 5I4K ASN A 22 UNP Q8Y653 EXPRESSION TAG SEQADV 5I4K ALA A 23 UNP Q8Y653 EXPRESSION TAG SEQRES 1 A 290 SER ASN ALA SER ASP SER LYS LYS THR ASP GLY LYS LEU SEQRES 2 A 290 ASN VAL VAL ALA THR TYR SER ILE LEU ALA ASP ILE VAL SEQRES 3 A 290 LYS ASN VAL GLY GLY ASN LYS ILE GLU LEU HIS SER ILE SEQRES 4 A 290 VAL PRO VAL GLY VAL ASP PRO HIS GLU TYR ASP PRO LEU SEQRES 5 A 290 PRO ALA ASN ILE GLN SER ALA ALA ASP ALA ASP LEU ILE SEQRES 6 A 290 PHE TYR ASN GLY LEU ASN LEU GLU THR GLY ASN GLY TRP SEQRES 7 A 290 PHE ASP ARG MSE LEU GLU THR ALA ASP LYS SER ARG GLU SEQRES 8 A 290 ASP LYS ASN GLN VAL VAL GLU LEU SER LYS GLY VAL LYS SEQRES 9 A 290 PRO LYS TYR LEU THR GLU LYS GLY LYS THR SER GLU THR SEQRES 10 A 290 ASP PRO HIS ALA TRP LEU ASP LEU HIS ASN GLY ILE ILE SEQRES 11 A 290 TYR THR GLU ASN VAL ARG ASP ALA LEU VAL LYS ALA ASP SEQRES 12 A 290 PRO ASP ASN ALA ASP PHE TYR LYS GLU ASN ALA LYS LYS SEQRES 13 A 290 TYR ILE ASP LYS LEU ALA THR LEU ASP LYS GLU ALA LYS SEQRES 14 A 290 GLN LYS PHE ALA ASP LEU PRO GLU ASN GLN LYS THR LEU SEQRES 15 A 290 VAL THR SER GLU GLY ALA PHE LYS TYR PHE ALA ALA ARG SEQRES 16 A 290 TYR GLY LEU LYS ALA ALA TYR ILE TRP GLU ILE ASN THR SEQRES 17 A 290 GLU SER GLN GLY THR PRO ASP GLN MSE LYS GLN ILE VAL SEQRES 18 A 290 GLY ILE VAL GLU LYS GLU LYS VAL PRO ASN LEU PHE VAL SEQRES 19 A 290 GLU THR SER VAL ASP PRO ARG SER MSE GLU SER VAL SER SEQRES 20 A 290 LYS GLU THR GLY VAL PRO ILE PHE ALA LYS ILE PHE THR SEQRES 21 A 290 ASP SER THR ALA LYS LYS GLY GLU VAL GLY ASP THR TYR SEQRES 22 A 290 LEU GLU MSE MSE ARG TYR ASN LEU ASP LYS ILE HIS ASP SEQRES 23 A 290 GLY LEU ALA LYS MODRES 5I4K MSE A 102 MET MODIFIED RESIDUE MODRES 5I4K MSE A 237 MET MODIFIED RESIDUE MODRES 5I4K MSE A 263 MET MODIFIED RESIDUE MODRES 5I4K MSE A 296 MET MODIFIED RESIDUE MODRES 5I4K MSE A 297 MET MODIFIED RESIDUE HET MSE A 102 8 HET MSE A 237 8 HET MSE A 263 8 HET MSE A 296 8 HET MSE A 297 8 HET MN A 501 1 HET MN A 502 1 HET CL A 503 1 HETNAM MSE SELENOMETHIONINE HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 MN 2(MN 2+) FORMUL 4 CL CL 1- FORMUL 5 HOH *222(H2 O) HELIX 1 AA1 TYR A 39 GLY A 51 1 13 HELIX 2 AA2 LEU A 72 ALA A 82 1 11 HELIX 3 AA3 THR A 94 ASN A 96 5 3 HELIX 4 AA4 GLY A 97 ALA A 106 1 10 HELIX 5 AA5 HIS A 140 LEU A 143 5 4 HELIX 6 AA6 ASP A 144 ASP A 163 1 20 HELIX 7 AA7 ASN A 166 PHE A 192 1 27 HELIX 8 AA8 PHE A 209 GLY A 217 1 9 HELIX 9 AA9 THR A 233 GLU A 247 1 15 HELIX 10 AB1 PRO A 260 GLY A 271 1 12 HELIX 11 AB2 THR A 292 ALA A 309 1 18 SHEET 1 AA1 4 ILE A 54 SER A 58 0 SHEET 2 AA1 4 LEU A 33 ALA A 37 1 N LEU A 33 O GLU A 55 SHEET 3 AA1 4 LEU A 84 TYR A 87 1 O PHE A 86 N VAL A 36 SHEET 4 AA1 4 VAL A 116 GLU A 118 1 O VAL A 117 N ILE A 85 SHEET 1 AA2 2 THR A 201 GLU A 206 0 SHEET 2 AA2 2 LYS A 219 TRP A 224 1 O LYS A 219 N LEU A 202 SHEET 1 AA3 2 LEU A 252 GLU A 255 0 SHEET 2 AA3 2 ILE A 274 ILE A 278 1 O PHE A 275 N LEU A 252 LINK NE2 HIS A 67 MN MN A 501 1555 1555 2.25 LINK C ARG A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N LEU A 103 1555 1555 1.33 LINK NE2 HIS A 140 MN MN A 501 1555 1555 2.15 LINK OE1 GLU A 206 MN MN A 501 1555 1555 2.18 LINK OE2 GLU A 206 MN MN A 501 1555 1555 2.54 LINK C GLN A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N LYS A 238 1555 1555 1.33 LINK C SER A 262 N MSE A 263 1555 1555 1.33 LINK C MSE A 263 N GLU A 264 1555 1555 1.34 LINK OD1 ASP A 281 MN MN A 501 1555 1555 2.47 LINK OD2 ASP A 281 MN MN A 501 1555 1555 2.14 LINK OD1 ASP A 291 MN MN A 502 1555 1555 2.25 LINK C GLU A 295 N MSE A 296 1555 1555 1.33 LINK OE1 GLU A 295 MN MN A 502 1555 1555 2.42 LINK OE2 GLU A 295 MN MN A 502 1555 1555 2.72 LINK C MSE A 296 N MSE A 297 1555 1555 1.34 LINK C MSE A 297 N ARG A 298 1555 1555 1.33 LINK MN MN A 502 O HOH A 623 1555 1555 1.90 LINK MN MN A 502 O HOH A 724 1555 1555 2.05 LINK MN MN A 502 O HOH A 637 1555 1555 2.33 LINK MN MN A 502 O HOH A 779 1555 1555 1.99 SITE 1 AC1 4 HIS A 67 HIS A 140 GLU A 206 ASP A 281 SITE 1 AC2 6 ASP A 291 GLU A 295 HOH A 623 HOH A 637 SITE 2 AC2 6 HOH A 724 HOH A 779 SITE 1 AC3 3 LYS A 126 TYR A 127 HOH A 664 CRYST1 57.906 62.311 75.492 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017269 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013246 0.00000