data_5I50 # _entry.id 5I50 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5I50 pdb_00005i50 10.2210/pdb5i50/pdb WWPDB D_1000217717 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-26 2 'Structure model' 1 1 2017-04-19 3 'Structure model' 1 2 2019-02-20 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_entity_src_syn 3 3 'Structure model' pdbx_seq_map_depositor_info 4 3 'Structure model' struct_conn 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 4 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5I50 _pdbx_database_status.recvd_initial_deposition_date 2016-02-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Koelmel, W.' 1 'Jung, L.A.' 2 'Kuper, J.' 3 'Eilers, M.' 4 'Kisker, C.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Oncogene _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1476-5594 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 36 _citation.language ? _citation.page_first 1911 _citation.page_last 1924 _citation.title 'OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/onc.2016.354 _citation.pdbx_database_id_PubMed 27748763 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jung, L.A.' 1 ? primary 'Gebhardt, A.' 2 ? primary 'Koelmel, W.' 3 ? primary 'Ade, C.P.' 4 ? primary 'Walz, S.' 5 ? primary 'Kuper, J.' 6 ? primary 'von Eyss, B.' 7 ? primary 'Letschert, S.' 8 ? primary 'Redel, C.' 9 ? primary ;d'Artista, L. ; 10 ? primary 'Biankin, A.' 11 ? primary 'Zender, L.' 12 ? primary 'Sauer, M.' 13 ? primary 'Wolf, E.' 14 ? primary 'Evan, G.' 15 ? primary 'Kisker, C.' 16 ? primary 'Eilers, M.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myc proto-oncogene protein' 14036.048 2 ? ? 'OmoMYC, UNP Residues 350-439' ? 2 polymer syn ;DNA (5'-D(P*CP*AP*CP*CP*CP*GP*GP*TP*CP*AP*CP*GP*TP*GP*GP*CP*CP*TP*AP*CP*AP*C)-3') ; 6658.294 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*TP*GP*TP*AP*GP*GP*CP*CP*AP*CP*GP*TP*GP*AP*CP*CP*GP*GP*GP*TP*G)-3') ; 6849.401 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Class E basic helix-loop-helix protein 39,bHLHe39,Proto-oncogene c-Myc,Transcription factor p64' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKHHHHHHPMSDYDIPTTENLYFQGAMATEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATA YILSVQAETQKLISEIDLLRKQNEQLKHKLEQLRNSCA ; ;MKHHHHHHPMSDYDIPTTENLYFQGAMATEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATA YILSVQAETQKLISEIDLLRKQNEQLKHKLEQLRNSCA ; A,B ? 2 polydeoxyribonucleotide no no ;(DC)(DA)(DC)(DC)(DC)(DG)(DG)(DT)(DC)(DA)(DC)(DG)(DT)(DG)(DG)(DC)(DC)(DT)(DA)(DC) (DA)(DC) ; CACCCGGTCACGTGGCCTACAC C ? 3 polydeoxyribonucleotide no no ;(DG)(DT)(DG)(DT)(DA)(DG)(DG)(DC)(DC)(DA)(DC)(DG)(DT)(DG)(DA)(DC)(DC)(DG)(DG)(DG) (DT)(DG) ; GTGTAGGCCACGTGACCGGGTG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 PRO n 1 10 MET n 1 11 SER n 1 12 ASP n 1 13 TYR n 1 14 ASP n 1 15 ILE n 1 16 PRO n 1 17 THR n 1 18 THR n 1 19 GLU n 1 20 ASN n 1 21 LEU n 1 22 TYR n 1 23 PHE n 1 24 GLN n 1 25 GLY n 1 26 ALA n 1 27 MET n 1 28 ALA n 1 29 THR n 1 30 GLU n 1 31 GLU n 1 32 ASN n 1 33 VAL n 1 34 LYS n 1 35 ARG n 1 36 ARG n 1 37 THR n 1 38 HIS n 1 39 ASN n 1 40 VAL n 1 41 LEU n 1 42 GLU n 1 43 ARG n 1 44 GLN n 1 45 ARG n 1 46 ARG n 1 47 ASN n 1 48 GLU n 1 49 LEU n 1 50 LYS n 1 51 ARG n 1 52 SER n 1 53 PHE n 1 54 PHE n 1 55 ALA n 1 56 LEU n 1 57 ARG n 1 58 ASP n 1 59 GLN n 1 60 ILE n 1 61 PRO n 1 62 GLU n 1 63 LEU n 1 64 GLU n 1 65 ASN n 1 66 ASN n 1 67 GLU n 1 68 LYS n 1 69 ALA n 1 70 PRO n 1 71 LYS n 1 72 VAL n 1 73 VAL n 1 74 ILE n 1 75 LEU n 1 76 LYS n 1 77 LYS n 1 78 ALA n 1 79 THR n 1 80 ALA n 1 81 TYR n 1 82 ILE n 1 83 LEU n 1 84 SER n 1 85 VAL n 1 86 GLN n 1 87 ALA n 1 88 GLU n 1 89 THR n 1 90 GLN n 1 91 LYS n 1 92 LEU n 1 93 ILE n 1 94 SER n 1 95 GLU n 1 96 ILE n 1 97 ASP n 1 98 LEU n 1 99 LEU n 1 100 ARG n 1 101 LYS n 1 102 GLN n 1 103 ASN n 1 104 GLU n 1 105 GLN n 1 106 LEU n 1 107 LYS n 1 108 HIS n 1 109 LYS n 1 110 LEU n 1 111 GLU n 1 112 GLN n 1 113 LEU n 1 114 ARG n 1 115 ASN n 1 116 SER n 1 117 CYS n 1 118 ALA n 2 1 DC n 2 2 DA n 2 3 DC n 2 4 DC n 2 5 DC n 2 6 DG n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DA n 2 11 DC n 2 12 DG n 2 13 DT n 2 14 DG n 2 15 DG n 2 16 DC n 2 17 DC n 2 18 DT n 2 19 DA n 2 20 DC n 2 21 DA n 2 22 DC n 3 1 DG n 3 2 DT n 3 3 DG n 3 4 DT n 3 5 DA n 3 6 DG n 3 7 DG n 3 8 DC n 3 9 DC n 3 10 DA n 3 11 DC n 3 12 DG n 3 13 DT n 3 14 DG n 3 15 DA n 3 16 DC n 3 17 DC n 3 18 DG n 3 19 DG n 3 20 DG n 3 21 DT n 3 22 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 118 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MYC, BHLHE39' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 22 'synthetic construct' ? 32630 ? 3 1 sample 1 22 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -25 ? ? ? A . n A 1 2 LYS 2 -24 ? ? ? A . n A 1 3 HIS 3 -23 ? ? ? A . n A 1 4 HIS 4 -22 ? ? ? A . n A 1 5 HIS 5 -21 ? ? ? A . n A 1 6 HIS 6 -20 ? ? ? A . n A 1 7 HIS 7 -19 ? ? ? A . n A 1 8 HIS 8 -18 ? ? ? A . n A 1 9 PRO 9 -17 ? ? ? A . n A 1 10 MET 10 -16 ? ? ? A . n A 1 11 SER 11 -15 ? ? ? A . n A 1 12 ASP 12 -14 ? ? ? A . n A 1 13 TYR 13 -13 ? ? ? A . n A 1 14 ASP 14 -12 ? ? ? A . n A 1 15 ILE 15 -11 ? ? ? A . n A 1 16 PRO 16 -10 ? ? ? A . n A 1 17 THR 17 -9 ? ? ? A . n A 1 18 THR 18 -8 ? ? ? A . n A 1 19 GLU 19 -7 ? ? ? A . n A 1 20 ASN 20 -6 ? ? ? A . n A 1 21 LEU 21 -5 ? ? ? A . n A 1 22 TYR 22 -4 ? ? ? A . n A 1 23 PHE 23 -3 ? ? ? A . n A 1 24 GLN 24 -2 ? ? ? A . n A 1 25 GLY 25 -1 ? ? ? A . n A 1 26 ALA 26 0 ? ? ? A . n A 1 27 MET 27 1 1 MET MET A . n A 1 28 ALA 28 2 2 ALA ALA A . n A 1 29 THR 29 3 3 THR THR A . n A 1 30 GLU 30 4 4 GLU GLU A . n A 1 31 GLU 31 5 5 GLU GLU A . n A 1 32 ASN 32 6 6 ASN ASN A . n A 1 33 VAL 33 7 7 VAL VAL A . n A 1 34 LYS 34 8 8 LYS LYS A . n A 1 35 ARG 35 9 9 ARG ARG A . n A 1 36 ARG 36 10 10 ARG ARG A . n A 1 37 THR 37 11 11 THR THR A . n A 1 38 HIS 38 12 12 HIS HIS A . n A 1 39 ASN 39 13 13 ASN ASN A . n A 1 40 VAL 40 14 14 VAL VAL A . n A 1 41 LEU 41 15 15 LEU LEU A . n A 1 42 GLU 42 16 16 GLU GLU A . n A 1 43 ARG 43 17 17 ARG ARG A . n A 1 44 GLN 44 18 18 GLN GLN A . n A 1 45 ARG 45 19 19 ARG ARG A . n A 1 46 ARG 46 20 20 ARG ARG A . n A 1 47 ASN 47 21 21 ASN ASN A . n A 1 48 GLU 48 22 22 GLU GLU A . n A 1 49 LEU 49 23 23 LEU LEU A . n A 1 50 LYS 50 24 24 LYS LYS A . n A 1 51 ARG 51 25 25 ARG ARG A . n A 1 52 SER 52 26 26 SER SER A . n A 1 53 PHE 53 27 27 PHE PHE A . n A 1 54 PHE 54 28 28 PHE PHE A . n A 1 55 ALA 55 29 29 ALA ALA A . n A 1 56 LEU 56 30 30 LEU LEU A . n A 1 57 ARG 57 31 31 ARG ARG A . n A 1 58 ASP 58 32 32 ASP ASP A . n A 1 59 GLN 59 33 33 GLN GLN A . n A 1 60 ILE 60 34 34 ILE ILE A . n A 1 61 PRO 61 35 35 PRO PRO A . n A 1 62 GLU 62 36 36 GLU GLU A . n A 1 63 LEU 63 37 37 LEU LEU A . n A 1 64 GLU 64 38 38 GLU GLU A . n A 1 65 ASN 65 39 39 ASN ASN A . n A 1 66 ASN 66 40 40 ASN ASN A . n A 1 67 GLU 67 41 41 GLU GLU A . n A 1 68 LYS 68 42 42 LYS LYS A . n A 1 69 ALA 69 43 43 ALA ALA A . n A 1 70 PRO 70 44 44 PRO PRO A . n A 1 71 LYS 71 45 45 LYS LYS A . n A 1 72 VAL 72 46 46 VAL VAL A . n A 1 73 VAL 73 47 47 VAL VAL A . n A 1 74 ILE 74 48 48 ILE ILE A . n A 1 75 LEU 75 49 49 LEU LEU A . n A 1 76 LYS 76 50 50 LYS LYS A . n A 1 77 LYS 77 51 51 LYS LYS A . n A 1 78 ALA 78 52 52 ALA ALA A . n A 1 79 THR 79 53 53 THR THR A . n A 1 80 ALA 80 54 54 ALA ALA A . n A 1 81 TYR 81 55 55 TYR TYR A . n A 1 82 ILE 82 56 56 ILE ILE A . n A 1 83 LEU 83 57 57 LEU LEU A . n A 1 84 SER 84 58 58 SER SER A . n A 1 85 VAL 85 59 59 VAL VAL A . n A 1 86 GLN 86 60 60 GLN GLN A . n A 1 87 ALA 87 61 61 ALA ALA A . n A 1 88 GLU 88 62 62 GLU GLU A . n A 1 89 THR 89 63 63 THR THR A . n A 1 90 GLN 90 64 64 GLN GLN A . n A 1 91 LYS 91 65 65 LYS LYS A . n A 1 92 LEU 92 66 66 LEU LEU A . n A 1 93 ILE 93 67 67 ILE ILE A . n A 1 94 SER 94 68 68 SER SER A . n A 1 95 GLU 95 69 69 GLU GLU A . n A 1 96 ILE 96 70 70 ILE ILE A . n A 1 97 ASP 97 71 71 ASP ASP A . n A 1 98 LEU 98 72 72 LEU LEU A . n A 1 99 LEU 99 73 73 LEU LEU A . n A 1 100 ARG 100 74 74 ARG ARG A . n A 1 101 LYS 101 75 75 LYS LYS A . n A 1 102 GLN 102 76 76 GLN GLN A . n A 1 103 ASN 103 77 77 ASN ASN A . n A 1 104 GLU 104 78 78 GLU GLU A . n A 1 105 GLN 105 79 79 GLN GLN A . n A 1 106 LEU 106 80 80 LEU LEU A . n A 1 107 LYS 107 81 81 LYS LYS A . n A 1 108 HIS 108 82 82 HIS HIS A . n A 1 109 LYS 109 83 83 LYS LYS A . n A 1 110 LEU 110 84 84 LEU LEU A . n A 1 111 GLU 111 85 85 GLU GLU A . n A 1 112 GLN 112 86 86 GLN GLN A . n A 1 113 LEU 113 87 87 LEU LEU A . n A 1 114 ARG 114 88 88 ARG ARG A . n A 1 115 ASN 115 89 89 ASN ASN A . n A 1 116 SER 116 90 90 SER SER A . n A 1 117 CYS 117 91 91 CYS CYS A . n A 1 118 ALA 118 92 92 ALA ALA A . n B 1 1 MET 1 -25 ? ? ? B . n B 1 2 LYS 2 -24 ? ? ? B . n B 1 3 HIS 3 -23 ? ? ? B . n B 1 4 HIS 4 -22 ? ? ? B . n B 1 5 HIS 5 -21 ? ? ? B . n B 1 6 HIS 6 -20 ? ? ? B . n B 1 7 HIS 7 -19 ? ? ? B . n B 1 8 HIS 8 -18 ? ? ? B . n B 1 9 PRO 9 -17 ? ? ? B . n B 1 10 MET 10 -16 ? ? ? B . n B 1 11 SER 11 -15 ? ? ? B . n B 1 12 ASP 12 -14 ? ? ? B . n B 1 13 TYR 13 -13 ? ? ? B . n B 1 14 ASP 14 -12 ? ? ? B . n B 1 15 ILE 15 -11 ? ? ? B . n B 1 16 PRO 16 -10 ? ? ? B . n B 1 17 THR 17 -9 ? ? ? B . n B 1 18 THR 18 -8 ? ? ? B . n B 1 19 GLU 19 -7 ? ? ? B . n B 1 20 ASN 20 -6 ? ? ? B . n B 1 21 LEU 21 -5 ? ? ? B . n B 1 22 TYR 22 -4 ? ? ? B . n B 1 23 PHE 23 -3 -3 PHE PHE B . n B 1 24 GLN 24 -2 -2 GLN GLN B . n B 1 25 GLY 25 -1 -1 GLY GLY B . n B 1 26 ALA 26 0 0 ALA ALA B . n B 1 27 MET 27 1 1 MET MET B . n B 1 28 ALA 28 2 2 ALA ALA B . n B 1 29 THR 29 3 3 THR THR B . n B 1 30 GLU 30 4 4 GLU GLU B . n B 1 31 GLU 31 5 5 GLU GLU B . n B 1 32 ASN 32 6 6 ASN ASN B . n B 1 33 VAL 33 7 7 VAL VAL B . n B 1 34 LYS 34 8 8 LYS LYS B . n B 1 35 ARG 35 9 9 ARG ARG B . n B 1 36 ARG 36 10 10 ARG ARG B . n B 1 37 THR 37 11 11 THR THR B . n B 1 38 HIS 38 12 12 HIS HIS B . n B 1 39 ASN 39 13 13 ASN ASN B . n B 1 40 VAL 40 14 14 VAL VAL B . n B 1 41 LEU 41 15 15 LEU LEU B . n B 1 42 GLU 42 16 16 GLU GLU B . n B 1 43 ARG 43 17 17 ARG ARG B . n B 1 44 GLN 44 18 18 GLN GLN B . n B 1 45 ARG 45 19 19 ARG ARG B . n B 1 46 ARG 46 20 20 ARG ARG B . n B 1 47 ASN 47 21 21 ASN ASN B . n B 1 48 GLU 48 22 22 GLU GLU B . n B 1 49 LEU 49 23 23 LEU LEU B . n B 1 50 LYS 50 24 24 LYS LYS B . n B 1 51 ARG 51 25 25 ARG ARG B . n B 1 52 SER 52 26 26 SER SER B . n B 1 53 PHE 53 27 27 PHE PHE B . n B 1 54 PHE 54 28 28 PHE PHE B . n B 1 55 ALA 55 29 29 ALA ALA B . n B 1 56 LEU 56 30 30 LEU LEU B . n B 1 57 ARG 57 31 31 ARG ARG B . n B 1 58 ASP 58 32 32 ASP ASP B . n B 1 59 GLN 59 33 33 GLN GLN B . n B 1 60 ILE 60 34 34 ILE ILE B . n B 1 61 PRO 61 35 35 PRO PRO B . n B 1 62 GLU 62 36 36 GLU GLU B . n B 1 63 LEU 63 37 37 LEU LEU B . n B 1 64 GLU 64 38 38 GLU GLU B . n B 1 65 ASN 65 39 39 ASN ASN B . n B 1 66 ASN 66 40 40 ASN ASN B . n B 1 67 GLU 67 41 41 GLU GLU B . n B 1 68 LYS 68 42 42 LYS LYS B . n B 1 69 ALA 69 43 43 ALA ALA B . n B 1 70 PRO 70 44 44 PRO PRO B . n B 1 71 LYS 71 45 45 LYS LYS B . n B 1 72 VAL 72 46 46 VAL VAL B . n B 1 73 VAL 73 47 47 VAL VAL B . n B 1 74 ILE 74 48 48 ILE ILE B . n B 1 75 LEU 75 49 49 LEU LEU B . n B 1 76 LYS 76 50 50 LYS LYS B . n B 1 77 LYS 77 51 51 LYS LYS B . n B 1 78 ALA 78 52 52 ALA ALA B . n B 1 79 THR 79 53 53 THR THR B . n B 1 80 ALA 80 54 54 ALA ALA B . n B 1 81 TYR 81 55 55 TYR TYR B . n B 1 82 ILE 82 56 56 ILE ILE B . n B 1 83 LEU 83 57 57 LEU LEU B . n B 1 84 SER 84 58 58 SER SER B . n B 1 85 VAL 85 59 59 VAL VAL B . n B 1 86 GLN 86 60 60 GLN GLN B . n B 1 87 ALA 87 61 61 ALA ALA B . n B 1 88 GLU 88 62 62 GLU GLU B . n B 1 89 THR 89 63 63 THR THR B . n B 1 90 GLN 90 64 64 GLN GLN B . n B 1 91 LYS 91 65 65 LYS LYS B . n B 1 92 LEU 92 66 66 LEU LEU B . n B 1 93 ILE 93 67 67 ILE ILE B . n B 1 94 SER 94 68 68 SER SER B . n B 1 95 GLU 95 69 69 GLU GLU B . n B 1 96 ILE 96 70 70 ILE ILE B . n B 1 97 ASP 97 71 71 ASP ASP B . n B 1 98 LEU 98 72 72 LEU LEU B . n B 1 99 LEU 99 73 73 LEU LEU B . n B 1 100 ARG 100 74 74 ARG ARG B . n B 1 101 LYS 101 75 75 LYS LYS B . n B 1 102 GLN 102 76 76 GLN GLN B . n B 1 103 ASN 103 77 77 ASN ASN B . n B 1 104 GLU 104 78 78 GLU GLU B . n B 1 105 GLN 105 79 79 GLN GLN B . n B 1 106 LEU 106 80 80 LEU LEU B . n B 1 107 LYS 107 81 81 LYS LYS B . n B 1 108 HIS 108 82 82 HIS HIS B . n B 1 109 LYS 109 83 83 LYS LYS B . n B 1 110 LEU 110 84 84 LEU LEU B . n B 1 111 GLU 111 85 85 GLU GLU B . n B 1 112 GLN 112 86 86 GLN GLN B . n B 1 113 LEU 113 87 87 LEU LEU B . n B 1 114 ARG 114 88 88 ARG ARG B . n B 1 115 ASN 115 89 89 ASN ASN B . n B 1 116 SER 116 90 90 SER SER B . n B 1 117 CYS 117 91 91 CYS CYS B . n B 1 118 ALA 118 92 92 ALA ALA B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DA 2 2 2 DA DA C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DC 4 4 4 DC DC C . n C 2 5 DC 5 5 5 DC DC C . n C 2 6 DG 6 6 6 DG DG C . n C 2 7 DG 7 7 7 DG DG C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DC 9 9 9 DC DC C . n C 2 10 DA 10 10 10 DA DA C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DG 12 12 12 DG DG C . n C 2 13 DT 13 13 13 DT DT C . n C 2 14 DG 14 14 14 DG DG C . n C 2 15 DG 15 15 15 DG DG C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DC 17 17 17 DC DC C . n C 2 18 DT 18 18 18 DT DT C . n C 2 19 DA 19 19 19 DA DA C . n C 2 20 DC 20 20 20 DC DC C . n C 2 21 DA 21 21 21 DA DA C . n C 2 22 DC 22 22 22 DC DC C . n D 3 1 DG 1 1 1 DG DG D . n D 3 2 DT 2 2 2 DT DT D . n D 3 3 DG 3 3 3 DG DG D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DA 5 5 5 DA DA D . n D 3 6 DG 6 6 6 DG DG D . n D 3 7 DG 7 7 7 DG DG D . n D 3 8 DC 8 8 8 DC DC D . n D 3 9 DC 9 9 9 DC DC D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DG 12 12 12 DG DG D . n D 3 13 DT 13 13 13 DT DT D . n D 3 14 DG 14 14 14 DG DG D . n D 3 15 DA 15 15 15 DA DA D . n D 3 16 DC 16 16 16 DC DC D . n D 3 17 DC 17 17 17 DC DC D . n D 3 18 DG 18 18 18 DG DG D . n D 3 19 DG 19 19 19 DG DG D . n D 3 20 DG 20 20 20 DG DG D . n D 3 21 DT 21 21 21 DT DT D . n D 3 22 DG 22 22 22 DG DG D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 5I50 _cell.length_a 36.538 _cell.length_b 95.545 _cell.length_c 64.944 _cell.angle_alpha 90.00 _cell.angle_beta 105.90 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I50 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5I50 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MES, magnesium sulfate, potassium chloride, PEG 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-06-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 68.9 _reflns.entry_id 5I50 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 47.77 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11787 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.8 _reflns.pdbx_Rmerge_I_obs 0.116 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.83 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.845 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.593 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5I50 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11726 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.945 _refine.ls_d_res_high 2.701 _refine.ls_percent_reflns_obs 99.05 _refine.ls_R_factor_obs 0.2290 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2265 _refine.ls_R_factor_R_free 0.2794 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.73 _refine.ls_number_reflns_R_free 555 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 5I4Z _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 35.82 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1557 _refine_hist.pdbx_number_atoms_nucleic_acid 902 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2459 _refine_hist.d_res_high 2.701 _refine_hist.d_res_low 37.945 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2585 'X-RAY DIFFRACTION' ? f_angle_d 0.776 ? ? 3661 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.703 ? ? 1080 'X-RAY DIFFRACTION' ? f_chiral_restr 0.034 ? ? 416 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 321 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.7006 2.9723 2787 0.3360 100.00 0.3957 . . 160 . . . . 'X-RAY DIFFRACTION' . 2.9723 3.4021 2747 0.2682 98.00 0.3588 . . 125 . . . . 'X-RAY DIFFRACTION' . 3.4021 4.2854 2790 0.2191 99.00 0.2739 . . 122 . . . . 'X-RAY DIFFRACTION' . 4.2854 37.9492 2847 0.1901 100.00 0.2298 . . 148 . . . . # _struct.entry_id 5I50 _struct.title 'Structure of OmoMYC bound to double-stranded DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5I50 _struct_keywords.text 'leucine zipper, transcription factor, tumor suppressor, E-box, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MYC_HUMAN P01106 ? 1 ;TEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKH KLEQLRNSCA ; 350 2 PDB 5I50 5I50 ? 2 ? 1 3 PDB 5I50 5I50 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5I50 A 29 ? 118 ? P01106 350 ? 439 ? 3 92 2 1 5I50 B 29 ? 118 ? P01106 350 ? 439 ? 3 92 3 2 5I50 C 1 ? 22 ? 5I50 1 ? 22 ? 1 22 4 3 5I50 D 1 ? 22 ? 5I50 1 ? 22 ? 1 22 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5I50 MET A 1 ? UNP P01106 ? ? 'initiating methionine' -25 1 1 5I50 LYS A 2 ? UNP P01106 ? ? 'expression tag' -24 2 1 5I50 HIS A 3 ? UNP P01106 ? ? 'expression tag' -23 3 1 5I50 HIS A 4 ? UNP P01106 ? ? 'expression tag' -22 4 1 5I50 HIS A 5 ? UNP P01106 ? ? 'expression tag' -21 5 1 5I50 HIS A 6 ? UNP P01106 ? ? 'expression tag' -20 6 1 5I50 HIS A 7 ? UNP P01106 ? ? 'expression tag' -19 7 1 5I50 HIS A 8 ? UNP P01106 ? ? 'expression tag' -18 8 1 5I50 PRO A 9 ? UNP P01106 ? ? 'expression tag' -17 9 1 5I50 MET A 10 ? UNP P01106 ? ? 'expression tag' -16 10 1 5I50 SER A 11 ? UNP P01106 ? ? 'expression tag' -15 11 1 5I50 ASP A 12 ? UNP P01106 ? ? 'expression tag' -14 12 1 5I50 TYR A 13 ? UNP P01106 ? ? 'expression tag' -13 13 1 5I50 ASP A 14 ? UNP P01106 ? ? 'expression tag' -12 14 1 5I50 ILE A 15 ? UNP P01106 ? ? 'expression tag' -11 15 1 5I50 PRO A 16 ? UNP P01106 ? ? 'expression tag' -10 16 1 5I50 THR A 17 ? UNP P01106 ? ? 'expression tag' -9 17 1 5I50 THR A 18 ? UNP P01106 ? ? 'expression tag' -8 18 1 5I50 GLU A 19 ? UNP P01106 ? ? 'expression tag' -7 19 1 5I50 ASN A 20 ? UNP P01106 ? ? 'expression tag' -6 20 1 5I50 LEU A 21 ? UNP P01106 ? ? 'expression tag' -5 21 1 5I50 TYR A 22 ? UNP P01106 ? ? 'expression tag' -4 22 1 5I50 PHE A 23 ? UNP P01106 ? ? 'expression tag' -3 23 1 5I50 GLN A 24 ? UNP P01106 ? ? 'expression tag' -2 24 1 5I50 GLY A 25 ? UNP P01106 ? ? 'expression tag' -1 25 1 5I50 ALA A 26 ? UNP P01106 ? ? 'expression tag' 0 26 1 5I50 MET A 27 ? UNP P01106 ? ? 'expression tag' 1 27 1 5I50 ALA A 28 ? UNP P01106 ? ? 'expression tag' 2 28 1 5I50 THR A 89 ? UNP P01106 GLU 410 'engineered mutation' 63 29 1 5I50 ILE A 96 ? UNP P01106 GLU 417 'engineered mutation' 70 30 1 5I50 GLN A 102 ? UNP P01106 ARG 423 'engineered mutation' 76 31 1 5I50 ASN A 103 ? UNP P01106 ARG 424 'engineered mutation' 77 32 2 5I50 MET B 1 ? UNP P01106 ? ? 'initiating methionine' -25 33 2 5I50 LYS B 2 ? UNP P01106 ? ? 'expression tag' -24 34 2 5I50 HIS B 3 ? UNP P01106 ? ? 'expression tag' -23 35 2 5I50 HIS B 4 ? UNP P01106 ? ? 'expression tag' -22 36 2 5I50 HIS B 5 ? UNP P01106 ? ? 'expression tag' -21 37 2 5I50 HIS B 6 ? UNP P01106 ? ? 'expression tag' -20 38 2 5I50 HIS B 7 ? UNP P01106 ? ? 'expression tag' -19 39 2 5I50 HIS B 8 ? UNP P01106 ? ? 'expression tag' -18 40 2 5I50 PRO B 9 ? UNP P01106 ? ? 'expression tag' -17 41 2 5I50 MET B 10 ? UNP P01106 ? ? 'expression tag' -16 42 2 5I50 SER B 11 ? UNP P01106 ? ? 'expression tag' -15 43 2 5I50 ASP B 12 ? UNP P01106 ? ? 'expression tag' -14 44 2 5I50 TYR B 13 ? UNP P01106 ? ? 'expression tag' -13 45 2 5I50 ASP B 14 ? UNP P01106 ? ? 'expression tag' -12 46 2 5I50 ILE B 15 ? UNP P01106 ? ? 'expression tag' -11 47 2 5I50 PRO B 16 ? UNP P01106 ? ? 'expression tag' -10 48 2 5I50 THR B 17 ? UNP P01106 ? ? 'expression tag' -9 49 2 5I50 THR B 18 ? UNP P01106 ? ? 'expression tag' -8 50 2 5I50 GLU B 19 ? UNP P01106 ? ? 'expression tag' -7 51 2 5I50 ASN B 20 ? UNP P01106 ? ? 'expression tag' -6 52 2 5I50 LEU B 21 ? UNP P01106 ? ? 'expression tag' -5 53 2 5I50 TYR B 22 ? UNP P01106 ? ? 'expression tag' -4 54 2 5I50 PHE B 23 ? UNP P01106 ? ? 'expression tag' -3 55 2 5I50 GLN B 24 ? UNP P01106 ? ? 'expression tag' -2 56 2 5I50 GLY B 25 ? UNP P01106 ? ? 'expression tag' -1 57 2 5I50 ALA B 26 ? UNP P01106 ? ? 'expression tag' 0 58 2 5I50 MET B 27 ? UNP P01106 ? ? 'expression tag' 1 59 2 5I50 ALA B 28 ? UNP P01106 ? ? 'expression tag' 2 60 2 5I50 THR B 89 ? UNP P01106 GLU 410 'engineered mutation' 63 61 2 5I50 ILE B 96 ? UNP P01106 GLU 417 'engineered mutation' 70 62 2 5I50 GLN B 102 ? UNP P01106 ARG 423 'engineered mutation' 76 63 2 5I50 ASN B 103 ? UNP P01106 ARG 424 'engineered mutation' 77 64 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8110 ? 1 MORE -66 ? 1 'SSA (A^2)' 19310 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 27 ? GLN A 59 ? MET A 1 GLN A 33 1 ? 33 HELX_P HELX_P2 AA2 ILE A 60 ? GLU A 64 ? ILE A 34 GLU A 38 5 ? 5 HELX_P HELX_P3 AA3 PRO A 70 ? GLN A 112 ? PRO A 44 GLN A 86 1 ? 43 HELX_P HELX_P4 AA4 GLY B 25 ? ASP B 58 ? GLY B -1 ASP B 32 1 ? 34 HELX_P HELX_P5 AA5 PRO B 70 ? GLN B 112 ? PRO B 44 GLN B 86 1 ? 43 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 117 SG ? ? ? 1_555 B CYS 117 SG ? ? A CYS 91 B CYS 91 1_555 ? ? ? ? ? ? ? 2.037 ? ? hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 22 N1 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 22 O6 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 22 N2 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 21 N3 ? ? C DA 2 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 21 O4 ? ? C DA 2 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 20 N1 ? ? C DC 3 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 20 O6 ? ? C DC 3 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 20 N2 ? ? C DC 3 D DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 18 N2 ? ? C DC 4 D DG 18 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog10 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 19 N2 ? ? C DC 4 D DG 19 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog11 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 18 N2 ? ? C DC 5 D DG 18 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog12 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 16 N4 ? ? C DG 6 D DC 16 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog13 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 17 O2 ? ? C DG 6 D DC 17 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog14 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 16 N3 ? ? C DG 7 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 16 O2 ? ? C DG 7 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 16 N4 ? ? C DG 7 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 8 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 8 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 14 N1 ? ? C DC 9 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 14 O6 ? ? C DC 9 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 14 N2 ? ? C DC 9 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 10 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 10 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 12 N1 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 12 O6 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 12 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 12 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 12 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 13 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 13 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 15 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 15 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 15 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 16 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 16 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 16 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 17 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 17 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 17 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DT 18 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 18 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DT 18 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 18 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 19 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 19 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 20 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 20 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DC 20 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 20 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DC 20 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 20 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DA 21 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 21 D DT 2 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog52 hydrog ? ? C DC 22 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 22 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DC 22 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 22 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DC 22 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 22 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 38 ? ? 57.86 -178.05 2 1 ASN A 40 ? ? -143.65 -96.99 3 1 GLU A 41 ? ? 64.20 140.35 4 1 SER A 90 ? ? -119.32 57.42 5 1 CYS A 91 ? ? -156.13 55.47 6 1 GLN B -2 ? ? 61.94 -133.65 7 1 ASN B 39 ? ? 27.75 47.09 8 1 SER B 90 ? ? -116.87 53.04 9 1 CYS B 91 ? ? -159.72 53.26 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 3.7945 -17.3269 -15.8928 0.1453 0.2960 0.6814 0.0380 0.1337 -0.1233 3.0526 3.0714 2.7289 -3.0557 -1.1620 1.0490 -0.1527 0.2321 -0.7105 -0.0234 0.3610 -0.4574 0.0442 0.2942 -0.3359 'X-RAY DIFFRACTION' 2 ? refined -5.4383 24.0246 -13.0704 0.7374 0.3584 0.7533 -0.0885 0.6335 -0.0609 1.3646 2.4280 1.1129 0.3808 0.9256 -0.2000 -0.1313 0.1229 0.7320 0.0266 0.0069 0.1555 -0.7074 0.1306 -0.4414 'X-RAY DIFFRACTION' 3 ? refined -16.9909 -17.2137 -18.1095 0.1704 0.2754 0.6343 -0.0811 0.2719 -0.0080 4.5841 3.8283 2.2555 4.1406 -0.8279 -1.1596 -0.4568 0.3603 -0.6031 -0.0648 0.1296 0.1576 0.5077 -0.4991 -0.0553 'X-RAY DIFFRACTION' 4 ? refined -0.2616 23.2715 -13.4169 0.9525 0.2524 0.6376 -0.0393 0.6911 0.0446 1.7768 1.8242 0.6114 -0.1083 0.7997 -0.7082 -0.2622 -0.1678 0.5057 0.4369 -0.0014 -0.2282 -0.6764 0.2492 -0.4565 'X-RAY DIFFRACTION' 5 ? refined 11.6678 -21.6605 -36.0861 1.4258 1.2343 1.1911 0.3376 0.8138 -0.0872 1.5788 0.6105 2.0837 -0.9762 -1.7199 1.0257 -0.0297 -0.0648 -0.0017 0.0165 0.1741 -0.0766 0.1334 0.3196 0.1142 'X-RAY DIFFRACTION' 6 ? refined -13.3831 -18.2441 -10.9543 0.7940 0.7591 1.0390 0.0271 0.4575 -0.0827 3.6460 0.4812 2.3105 -1.0055 0.8607 0.2998 0.1701 -0.8007 0.2733 0.6870 0.0252 0.4178 0.0279 -0.4804 -0.2168 'X-RAY DIFFRACTION' 7 ? refined -13.2928 -20.7413 -10.9284 0.8595 0.9079 0.8913 -0.1120 0.4968 0.0239 5.0454 2.1635 0.7016 0.8472 0.0219 -1.1752 -0.3804 -0.3513 -0.2503 0.8202 0.2671 0.5435 1.0518 -1.5174 0.0844 'X-RAY DIFFRACTION' 8 ? refined 12.6923 -15.6143 -36.1093 1.4327 1.7671 1.3354 0.3003 0.7727 -0.1228 4.6599 7.9139 1.8607 -4.3957 -2.7192 3.5794 -0.3544 -0.8978 0.0183 -0.0049 0.9902 -0.9111 0.3555 2.1896 -0.7149 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 33 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 34 through 92 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid -3 through 33 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 34 through 92 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 1 through 6 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 7 through 22 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 1 through 16 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 17 through 22 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -25 ? A MET 1 2 1 Y 1 A LYS -24 ? A LYS 2 3 1 Y 1 A HIS -23 ? A HIS 3 4 1 Y 1 A HIS -22 ? A HIS 4 5 1 Y 1 A HIS -21 ? A HIS 5 6 1 Y 1 A HIS -20 ? A HIS 6 7 1 Y 1 A HIS -19 ? A HIS 7 8 1 Y 1 A HIS -18 ? A HIS 8 9 1 Y 1 A PRO -17 ? A PRO 9 10 1 Y 1 A MET -16 ? A MET 10 11 1 Y 1 A SER -15 ? A SER 11 12 1 Y 1 A ASP -14 ? A ASP 12 13 1 Y 1 A TYR -13 ? A TYR 13 14 1 Y 1 A ASP -12 ? A ASP 14 15 1 Y 1 A ILE -11 ? A ILE 15 16 1 Y 1 A PRO -10 ? A PRO 16 17 1 Y 1 A THR -9 ? A THR 17 18 1 Y 1 A THR -8 ? A THR 18 19 1 Y 1 A GLU -7 ? A GLU 19 20 1 Y 1 A ASN -6 ? A ASN 20 21 1 Y 1 A LEU -5 ? A LEU 21 22 1 Y 1 A TYR -4 ? A TYR 22 23 1 Y 1 A PHE -3 ? A PHE 23 24 1 Y 1 A GLN -2 ? A GLN 24 25 1 Y 1 A GLY -1 ? A GLY 25 26 1 Y 1 A ALA 0 ? A ALA 26 27 1 Y 1 B MET -25 ? B MET 1 28 1 Y 1 B LYS -24 ? B LYS 2 29 1 Y 1 B HIS -23 ? B HIS 3 30 1 Y 1 B HIS -22 ? B HIS 4 31 1 Y 1 B HIS -21 ? B HIS 5 32 1 Y 1 B HIS -20 ? B HIS 6 33 1 Y 1 B HIS -19 ? B HIS 7 34 1 Y 1 B HIS -18 ? B HIS 8 35 1 Y 1 B PRO -17 ? B PRO 9 36 1 Y 1 B MET -16 ? B MET 10 37 1 Y 1 B SER -15 ? B SER 11 38 1 Y 1 B ASP -14 ? B ASP 12 39 1 Y 1 B TYR -13 ? B TYR 13 40 1 Y 1 B ASP -12 ? B ASP 14 41 1 Y 1 B ILE -11 ? B ILE 15 42 1 Y 1 B PRO -10 ? B PRO 16 43 1 Y 1 B THR -9 ? B THR 17 44 1 Y 1 B THR -8 ? B THR 18 45 1 Y 1 B GLU -7 ? B GLU 19 46 1 Y 1 B ASN -6 ? B ASN 20 47 1 Y 1 B LEU -5 ? B LEU 21 48 1 Y 1 B TYR -4 ? B TYR 22 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 VAL N N N N 485 VAL CA C N S 486 VAL C C N N 487 VAL O O N N 488 VAL CB C N N 489 VAL CG1 C N N 490 VAL CG2 C N N 491 VAL OXT O N N 492 VAL H H N N 493 VAL H2 H N N 494 VAL HA H N N 495 VAL HB H N N 496 VAL HG11 H N N 497 VAL HG12 H N N 498 VAL HG13 H N N 499 VAL HG21 H N N 500 VAL HG22 H N N 501 VAL HG23 H N N 502 VAL HXT H N N 503 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TYR N CA sing N N 453 TYR N H sing N N 454 TYR N H2 sing N N 455 TYR CA C sing N N 456 TYR CA CB sing N N 457 TYR CA HA sing N N 458 TYR C O doub N N 459 TYR C OXT sing N N 460 TYR CB CG sing N N 461 TYR CB HB2 sing N N 462 TYR CB HB3 sing N N 463 TYR CG CD1 doub Y N 464 TYR CG CD2 sing Y N 465 TYR CD1 CE1 sing Y N 466 TYR CD1 HD1 sing N N 467 TYR CD2 CE2 doub Y N 468 TYR CD2 HD2 sing N N 469 TYR CE1 CZ doub Y N 470 TYR CE1 HE1 sing N N 471 TYR CE2 CZ sing Y N 472 TYR CE2 HE2 sing N N 473 TYR CZ OH sing N N 474 TYR OH HH sing N N 475 TYR OXT HXT sing N N 476 VAL N CA sing N N 477 VAL N H sing N N 478 VAL N H2 sing N N 479 VAL CA C sing N N 480 VAL CA CB sing N N 481 VAL CA HA sing N N 482 VAL C O doub N N 483 VAL C OXT sing N N 484 VAL CB CG1 sing N N 485 VAL CB CG2 sing N N 486 VAL CB HB sing N N 487 VAL CG1 HG11 sing N N 488 VAL CG1 HG12 sing N N 489 VAL CG1 HG13 sing N N 490 VAL CG2 HG21 sing N N 491 VAL CG2 HG22 sing N N 492 VAL CG2 HG23 sing N N 493 VAL OXT HXT sing N N 494 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5I50 'double helix' 5I50 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 D DG 22 1_555 -0.627 -0.131 0.264 -13.489 -12.696 -13.953 1 C_DC1:DG22_D C 1 ? D 22 ? 19 1 1 C DA 2 1_555 D DT 21 1_555 1.846 -0.001 -0.070 -10.658 -15.202 -7.538 2 C_DA2:DT21_D C 2 ? D 21 ? 20 1 1 C DC 3 1_555 D DG 20 1_555 -0.586 -0.204 0.194 -10.023 -8.435 2.933 3 C_DC3:DG20_D C 3 ? D 20 ? 19 1 1 C DC 4 1_555 D DG 19 1_555 -0.022 0.476 0.616 -12.890 -12.879 10.732 4 C_DC4:DG19_D C 4 ? D 19 ? ? 1 1 C DC 5 1_555 D DG 18 1_555 -1.691 1.620 0.533 9.930 -24.175 55.265 5 C_DC5:DG18_D C 5 ? D 18 ? ? 1 1 C DG 6 1_555 D DC 17 1_555 0.518 0.271 0.682 4.664 -20.174 11.785 6 C_DG6:DC17_D C 6 ? D 17 ? ? 1 1 C DG 7 1_555 D DC 16 1_555 -0.533 -0.576 0.480 9.022 -13.621 0.837 7 C_DG7:DC16_D C 7 ? D 16 ? 19 1 1 C DT 8 1_555 D DA 15 1_555 -0.119 -0.332 0.219 -10.673 -9.648 -3.277 8 C_DT8:DA15_D C 8 ? D 15 ? 20 1 1 C DC 9 1_555 D DG 14 1_555 0.368 -0.193 0.359 -1.004 -14.155 -1.247 9 C_DC9:DG14_D C 9 ? D 14 ? 19 1 1 C DA 10 1_555 D DT 13 1_555 0.160 0.028 0.243 13.344 -14.371 -0.585 10 C_DA10:DT13_D C 10 ? D 13 ? 20 1 1 C DC 11 1_555 D DG 12 1_555 0.299 -0.405 0.523 -0.131 -16.106 -1.336 11 C_DC11:DG12_D C 11 ? D 12 ? 19 1 1 C DG 12 1_555 D DC 11 1_555 -0.408 -0.310 0.608 2.948 -18.773 -2.487 12 C_DG12:DC11_D C 12 ? D 11 ? 19 1 1 C DT 13 1_555 D DA 10 1_555 -0.431 -0.002 0.757 -8.059 -13.639 0.868 13 C_DT13:DA10_D C 13 ? D 10 ? 20 1 1 C DG 14 1_555 D DC 9 1_555 -0.268 -0.156 -0.048 7.712 -14.862 1.563 14 C_DG14:DC9_D C 14 ? D 9 ? 19 1 1 C DG 15 1_555 D DC 8 1_555 -0.094 0.012 -0.171 -4.636 -12.886 0.901 15 C_DG15:DC8_D C 15 ? D 8 ? 19 1 1 C DC 16 1_555 D DG 7 1_555 -0.185 -0.290 0.227 -3.330 -10.821 -0.307 16 C_DC16:DG7_D C 16 ? D 7 ? 19 1 1 C DC 17 1_555 D DG 6 1_555 -0.137 0.044 -0.618 0.657 -7.282 13.558 17 C_DC17:DG6_D C 17 ? D 6 ? 19 1 1 C DT 18 1_555 D DA 5 1_555 -0.243 -0.029 -0.292 13.898 -11.779 -3.147 18 C_DT18:DA5_D C 18 ? D 5 ? 20 1 1 C DA 19 1_555 D DT 4 1_555 -0.650 -0.362 -0.249 1.307 -7.187 5.427 19 C_DA19:DT4_D C 19 ? D 4 ? 20 1 1 C DC 20 1_555 D DG 3 1_555 0.321 -0.524 -0.565 5.626 -12.076 -5.218 20 C_DC20:DG3_D C 20 ? D 3 ? 19 1 1 C DA 21 1_555 D DT 2 1_555 1.170 0.374 0.363 -21.206 -8.067 13.579 21 C_DA21:DT2_D C 21 ? D 2 ? ? ? 1 C DC 22 1_555 D DG 1 1_555 -0.040 -0.789 0.864 -9.619 -11.632 -7.441 22 C_DC22:DG1_D C 22 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 D DG 22 1_555 C DA 2 1_555 D DT 21 1_555 0.378 0.215 3.235 6.943 -2.585 48.911 0.448 0.061 3.242 -3.101 -8.330 49.435 1 CC_DC1DA2:DT21DG22_DD C 1 ? D 22 ? C 2 ? D 21 ? 1 C DA 2 1_555 D DT 21 1_555 C DC 3 1_555 D DG 20 1_555 0.532 -0.880 3.180 -3.028 2.078 26.374 -2.430 -1.911 3.024 4.527 6.595 26.624 2 CC_DA2DC3:DG20DT21_DD C 2 ? D 21 ? C 3 ? D 20 ? 1 C DC 3 1_555 D DG 20 1_555 C DC 4 1_555 D DG 19 1_555 0.280 0.248 3.413 -0.588 0.063 33.136 0.423 -0.593 3.408 0.110 1.031 33.141 3 CC_DC3DC4:DG19DG20_DD C 3 ? D 20 ? C 4 ? D 19 ? 1 C DC 4 1_555 D DG 19 1_555 C DC 5 1_555 D DG 18 1_555 1.137 0.523 2.504 3.737 7.730 26.209 -0.438 -1.645 2.680 16.494 -7.974 27.556 4 CC_DC4DC5:DG18DG19_DD C 4 ? D 19 ? C 5 ? D 18 ? 1 C DC 5 1_555 D DG 18 1_555 C DG 6 1_555 D DC 17 1_555 -1.533 2.195 3.295 -9.480 4.065 49.595 2.259 1.072 3.669 4.786 11.162 50.590 5 CC_DC5DG6:DC17DG18_DD C 5 ? D 18 ? C 6 ? D 17 ? 1 C DG 6 1_555 D DC 17 1_555 C DG 7 1_555 D DC 16 1_555 -0.441 -0.639 3.112 -4.986 6.024 26.068 -2.785 -0.243 2.925 12.988 10.750 27.196 6 CC_DG6DG7:DC16DC17_DD C 6 ? D 17 ? C 7 ? D 16 ? 1 C DG 7 1_555 D DC 16 1_555 C DT 8 1_555 D DA 15 1_555 0.048 -1.089 3.877 3.720 4.163 34.285 -2.568 0.585 3.708 7.004 -6.259 34.723 7 CC_DG7DT8:DA15DC16_DD C 7 ? D 16 ? C 8 ? D 15 ? 1 C DT 8 1_555 D DA 15 1_555 C DC 9 1_555 D DG 14 1_555 0.030 -0.896 3.149 -1.688 0.491 35.168 -1.551 -0.290 3.132 0.811 2.791 35.210 8 CC_DT8DC9:DG14DA15_DD C 8 ? D 15 ? C 9 ? D 14 ? 1 C DC 9 1_555 D DG 14 1_555 C DA 10 1_555 D DT 13 1_555 -0.142 0.403 2.973 4.194 3.876 33.533 0.124 0.855 2.961 6.658 -7.205 34.002 9 CC_DC9DA10:DT13DG14_DD C 9 ? D 14 ? C 10 ? D 13 ? 1 C DA 10 1_555 D DT 13 1_555 C DC 11 1_555 D DG 12 1_555 -0.330 -0.797 3.603 -5.851 7.238 29.827 -2.974 -0.592 3.326 13.650 11.033 31.214 10 CC_DA10DC11:DG12DT13_DD C 10 ? D 13 ? C 11 ? D 12 ? 1 C DC 11 1_555 D DG 12 1_555 C DG 12 1_555 D DC 11 1_555 -0.367 0.100 3.469 -2.586 4.063 33.398 -0.530 0.184 3.474 7.024 4.470 33.734 11 CC_DC11DG12:DC11DG12_DD C 11 ? D 12 ? C 12 ? D 11 ? 1 C DG 12 1_555 D DC 11 1_555 C DT 13 1_555 D DA 10 1_555 0.549 -0.836 3.492 2.483 -1.243 31.914 -1.273 -0.512 3.553 -2.255 -4.506 32.031 12 CC_DG12DT13:DA10DC11_DD C 12 ? D 11 ? C 13 ? D 10 ? 1 C DT 13 1_555 D DA 10 1_555 C DG 14 1_555 D DC 9 1_555 0.059 0.530 2.959 5.044 5.210 34.117 0.158 0.606 2.983 8.758 -8.478 34.856 13 CC_DT13DG14:DC9DA10_DD C 13 ? D 10 ? C 14 ? D 9 ? 1 C DG 14 1_555 D DC 9 1_555 C DG 15 1_555 D DC 8 1_555 -0.489 -0.255 3.516 -4.270 6.359 34.337 -1.445 0.123 3.449 10.608 7.124 35.156 14 CC_DG14DG15:DC8DC9_DD C 14 ? D 9 ? C 15 ? D 8 ? 1 C DG 15 1_555 D DC 8 1_555 C DC 16 1_555 D DG 7 1_555 0.120 -0.638 3.368 -4.096 2.737 30.830 -1.716 -1.016 3.258 5.107 7.644 31.211 15 CC_DG15DC16:DG7DC8_DD C 15 ? D 8 ? C 16 ? D 7 ? 1 C DC 16 1_555 D DG 7 1_555 C DC 17 1_555 D DG 6 1_555 0.752 0.030 3.161 8.183 4.209 31.466 -0.670 0.072 3.227 7.560 -14.700 32.751 16 CC_DC16DC17:DG6DG7_DD C 16 ? D 7 ? C 17 ? D 6 ? 1 C DC 17 1_555 D DG 6 1_555 C DT 18 1_555 D DA 5 1_555 -0.592 0.294 3.131 -1.933 5.179 35.899 -0.229 0.688 3.168 8.341 3.114 36.308 17 CC_DC17DT18:DA5DG6_DD C 17 ? D 6 ? C 18 ? D 5 ? 1 C DT 18 1_555 D DA 5 1_555 C DA 19 1_555 D DT 4 1_555 1.328 0.354 3.440 2.168 7.892 34.150 -0.687 -1.853 3.507 13.205 -3.628 35.088 18 CC_DT18DA19:DT4DA5_DD C 18 ? D 5 ? C 19 ? D 4 ? 1 C DA 19 1_555 D DT 4 1_555 C DC 20 1_555 D DG 3 1_555 -0.596 -0.054 3.174 -2.550 1.463 40.881 -0.233 0.579 3.200 2.091 3.645 40.982 19 CC_DA19DC20:DG3DT4_DD C 19 ? D 4 ? C 20 ? D 3 ? 1 C DC 20 1_555 D DG 3 1_555 C DA 21 1_555 D DT 2 1_555 -0.175 -0.372 3.890 -4.266 0.242 35.100 -0.655 -0.462 3.881 0.399 7.041 35.351 20 CC_DC20DA21:DT2DG3_DD C 20 ? D 3 ? C 21 ? D 2 ? 1 C DA 21 1_555 D DT 2 1_555 C DC 22 1_555 D DG 1 1_555 -1.212 -0.842 3.329 -5.476 -6.734 31.924 -0.254 1.133 3.581 -11.970 9.733 33.053 21 CC_DA21DC22:DG1DT2_DD C 21 ? D 2 ? C 22 ? D 1 ? # _pdbx_audit_support.funding_organization 'German Research Foundation' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number 2341 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5I4Z _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5I50 _atom_sites.fract_transf_matrix[1][1] 0.027369 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007798 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010466 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016011 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_