HEADER TRANSCRIPTION 13-FEB-16 5I50 TITLE STRUCTURE OF OMOMYC BOUND TO DOUBLE-STRANDED DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYC PROTO-ONCOGENE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: OMOMYC, UNP RESIDUES 350-439; COMPND 5 SYNONYM: CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 39,BHLHE39,PROTO- COMPND 6 ONCOGENE C-MYC,TRANSCRIPTION FACTOR P64; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(P*CP*AP*CP*CP*CP*GP*GP*TP*CP*AP*CP*GP*TP*GP*GP*CP*CP*TP*AP*CP*AP*C) COMPND 11 -3'); COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA (5'- COMPND 16 D(P*GP*TP*GP*TP*AP*GP*GP*CP*CP*AP*CP*GP*TP*GP*AP*CP*CP*GP*GP*GP*TP*G) COMPND 17 -3'); COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MYC, BHLHE39; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS LEUCINE ZIPPER, TRANSCRIPTION FACTOR, TUMOR SUPPRESSOR, E-BOX, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR W.KOELMEL,L.A.JUNG,J.KUPER,M.EILERS,C.KISKER REVDAT 4 10-JAN-24 5I50 1 REMARK REVDAT 3 20-FEB-19 5I50 1 SOURCE REVDAT 2 19-APR-17 5I50 1 JRNL REVDAT 1 26-OCT-16 5I50 0 JRNL AUTH L.A.JUNG,A.GEBHARDT,W.KOELMEL,C.P.ADE,S.WALZ,J.KUPER, JRNL AUTH 2 B.VON EYSS,S.LETSCHERT,C.REDEL,L.D'ARTISTA,A.BIANKIN, JRNL AUTH 3 L.ZENDER,M.SAUER,E.WOLF,G.EVAN,C.KISKER,M.EILERS JRNL TITL OMOMYC BLUNTS PROMOTER INVASION BY ONCOGENIC MYC TO INHIBIT JRNL TITL 2 GENE EXPRESSION CHARACTERISTIC OF MYC-DEPENDENT TUMORS. JRNL REF ONCOGENE V. 36 1911 2017 JRNL REFN ESSN 1476-5594 JRNL PMID 27748763 JRNL DOI 10.1038/ONC.2016.354 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 11726 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.730 REMARK 3 FREE R VALUE TEST SET COUNT : 555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.9492 - 4.2854 1.00 2847 148 0.1901 0.2298 REMARK 3 2 4.2854 - 3.4021 0.99 2790 122 0.2191 0.2739 REMARK 3 3 3.4021 - 2.9723 0.98 2747 125 0.2682 0.3588 REMARK 3 4 2.9723 - 2.7006 1.00 2787 160 0.3360 0.3957 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2585 REMARK 3 ANGLE : 0.776 3661 REMARK 3 CHIRALITY : 0.034 416 REMARK 3 PLANARITY : 0.004 321 REMARK 3 DIHEDRAL : 23.703 1080 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7945 -17.3269 -15.8928 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.2960 REMARK 3 T33: 0.6814 T12: 0.0380 REMARK 3 T13: 0.1337 T23: -0.1233 REMARK 3 L TENSOR REMARK 3 L11: 3.0526 L22: 3.0714 REMARK 3 L33: 2.7289 L12: -3.0557 REMARK 3 L13: -1.1620 L23: 1.0490 REMARK 3 S TENSOR REMARK 3 S11: -0.1527 S12: 0.2321 S13: -0.7105 REMARK 3 S21: -0.0234 S22: 0.3610 S23: -0.4574 REMARK 3 S31: 0.0442 S32: 0.2942 S33: -0.3359 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4383 24.0246 -13.0704 REMARK 3 T TENSOR REMARK 3 T11: 0.7374 T22: 0.3584 REMARK 3 T33: 0.7533 T12: -0.0885 REMARK 3 T13: 0.6335 T23: -0.0609 REMARK 3 L TENSOR REMARK 3 L11: 1.3646 L22: 2.4280 REMARK 3 L33: 1.1129 L12: 0.3808 REMARK 3 L13: 0.9256 L23: -0.2000 REMARK 3 S TENSOR REMARK 3 S11: -0.1313 S12: 0.1229 S13: 0.7320 REMARK 3 S21: 0.0266 S22: 0.0069 S23: 0.1555 REMARK 3 S31: -0.7074 S32: 0.1306 S33: -0.4414 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -3 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9909 -17.2137 -18.1095 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.2754 REMARK 3 T33: 0.6343 T12: -0.0811 REMARK 3 T13: 0.2719 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 4.5841 L22: 3.8283 REMARK 3 L33: 2.2555 L12: 4.1406 REMARK 3 L13: -0.8279 L23: -1.1596 REMARK 3 S TENSOR REMARK 3 S11: -0.4568 S12: 0.3603 S13: -0.6031 REMARK 3 S21: -0.0648 S22: 0.1296 S23: 0.1576 REMARK 3 S31: 0.5077 S32: -0.4991 S33: -0.0553 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2616 23.2715 -13.4169 REMARK 3 T TENSOR REMARK 3 T11: 0.9525 T22: 0.2524 REMARK 3 T33: 0.6376 T12: -0.0393 REMARK 3 T13: 0.6911 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 1.7768 L22: 1.8242 REMARK 3 L33: 0.6114 L12: -0.1083 REMARK 3 L13: 0.7997 L23: -0.7082 REMARK 3 S TENSOR REMARK 3 S11: -0.2622 S12: -0.1678 S13: 0.5057 REMARK 3 S21: 0.4369 S22: -0.0014 S23: -0.2282 REMARK 3 S31: -0.6764 S32: 0.2492 S33: -0.4565 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6678 -21.6605 -36.0861 REMARK 3 T TENSOR REMARK 3 T11: 1.4258 T22: 1.2343 REMARK 3 T33: 1.1911 T12: 0.3376 REMARK 3 T13: 0.8138 T23: -0.0872 REMARK 3 L TENSOR REMARK 3 L11: 1.5788 L22: 0.6105 REMARK 3 L33: 2.0837 L12: -0.9762 REMARK 3 L13: -1.7199 L23: 1.0257 REMARK 3 S TENSOR REMARK 3 S11: -0.0297 S12: -0.0648 S13: -0.0017 REMARK 3 S21: 0.0165 S22: 0.1741 S23: -0.0766 REMARK 3 S31: 0.1334 S32: 0.3196 S33: 0.1142 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3831 -18.2441 -10.9543 REMARK 3 T TENSOR REMARK 3 T11: 0.7940 T22: 0.7591 REMARK 3 T33: 1.0390 T12: 0.0271 REMARK 3 T13: 0.4575 T23: -0.0827 REMARK 3 L TENSOR REMARK 3 L11: 3.6460 L22: 0.4812 REMARK 3 L33: 2.3105 L12: -1.0055 REMARK 3 L13: 0.8607 L23: 0.2998 REMARK 3 S TENSOR REMARK 3 S11: 0.1701 S12: -0.8007 S13: 0.2733 REMARK 3 S21: 0.6870 S22: 0.0252 S23: 0.4178 REMARK 3 S31: 0.0279 S32: -0.4804 S33: -0.2168 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2928 -20.7413 -10.9284 REMARK 3 T TENSOR REMARK 3 T11: 0.8595 T22: 0.9079 REMARK 3 T33: 0.8913 T12: -0.1120 REMARK 3 T13: 0.4968 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 5.0454 L22: 2.1635 REMARK 3 L33: 0.7016 L12: 0.8472 REMARK 3 L13: 0.0219 L23: -1.1752 REMARK 3 S TENSOR REMARK 3 S11: -0.3804 S12: -0.3513 S13: -0.2503 REMARK 3 S21: 0.8202 S22: 0.2671 S23: 0.5435 REMARK 3 S31: 1.0518 S32: -1.5174 S33: 0.0844 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 17 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6923 -15.6143 -36.1093 REMARK 3 T TENSOR REMARK 3 T11: 1.4327 T22: 1.7671 REMARK 3 T33: 1.3354 T12: 0.3003 REMARK 3 T13: 0.7727 T23: -0.1228 REMARK 3 L TENSOR REMARK 3 L11: 4.6599 L22: 7.9139 REMARK 3 L33: 1.8607 L12: -4.3957 REMARK 3 L13: -2.7192 L23: 3.5794 REMARK 3 S TENSOR REMARK 3 S11: -0.3544 S12: -0.8978 S13: 0.0183 REMARK 3 S21: -0.0049 S22: 0.9902 S23: -0.9111 REMARK 3 S31: 0.3555 S32: 2.1896 S33: -0.7149 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I50 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000217717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11787 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.84500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5I4Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, MAGNESIUM SULFATE, POTASSIUM REMARK 280 CHLORIDE, PEG 400, PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.77250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -25 REMARK 465 LYS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 PRO A -17 REMARK 465 MET A -16 REMARK 465 SER A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET B -25 REMARK 465 LYS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 PRO B -17 REMARK 465 MET B -16 REMARK 465 SER B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 465 THR B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 38 -178.05 57.86 REMARK 500 ASN A 40 -96.99 -143.65 REMARK 500 GLU A 41 140.35 64.20 REMARK 500 SER A 90 57.42 -119.32 REMARK 500 CYS A 91 55.47 -156.13 REMARK 500 GLN B -2 -133.65 61.94 REMARK 500 ASN B 39 47.09 27.75 REMARK 500 SER B 90 53.04 -116.87 REMARK 500 CYS B 91 53.26 -159.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 5I50 A 3 92 UNP P01106 MYC_HUMAN 350 439 DBREF 5I50 B 3 92 UNP P01106 MYC_HUMAN 350 439 DBREF 5I50 C 1 22 PDB 5I50 5I50 1 22 DBREF 5I50 D 1 22 PDB 5I50 5I50 1 22 SEQADV 5I50 MET A -25 UNP P01106 INITIATING METHIONINE SEQADV 5I50 LYS A -24 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -23 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -22 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -21 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -20 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -19 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS A -18 UNP P01106 EXPRESSION TAG SEQADV 5I50 PRO A -17 UNP P01106 EXPRESSION TAG SEQADV 5I50 MET A -16 UNP P01106 EXPRESSION TAG SEQADV 5I50 SER A -15 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASP A -14 UNP P01106 EXPRESSION TAG SEQADV 5I50 TYR A -13 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASP A -12 UNP P01106 EXPRESSION TAG SEQADV 5I50 ILE A -11 UNP P01106 EXPRESSION TAG SEQADV 5I50 PRO A -10 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR A -9 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR A -8 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLU A -7 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASN A -6 UNP P01106 EXPRESSION TAG SEQADV 5I50 LEU A -5 UNP P01106 EXPRESSION TAG SEQADV 5I50 TYR A -4 UNP P01106 EXPRESSION TAG SEQADV 5I50 PHE A -3 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLN A -2 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLY A -1 UNP P01106 EXPRESSION TAG SEQADV 5I50 ALA A 0 UNP P01106 EXPRESSION TAG SEQADV 5I50 MET A 1 UNP P01106 EXPRESSION TAG SEQADV 5I50 ALA A 2 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR A 63 UNP P01106 GLU 410 ENGINEERED MUTATION SEQADV 5I50 ILE A 70 UNP P01106 GLU 417 ENGINEERED MUTATION SEQADV 5I50 GLN A 76 UNP P01106 ARG 423 ENGINEERED MUTATION SEQADV 5I50 ASN A 77 UNP P01106 ARG 424 ENGINEERED MUTATION SEQADV 5I50 MET B -25 UNP P01106 INITIATING METHIONINE SEQADV 5I50 LYS B -24 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -23 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -22 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -21 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -20 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -19 UNP P01106 EXPRESSION TAG SEQADV 5I50 HIS B -18 UNP P01106 EXPRESSION TAG SEQADV 5I50 PRO B -17 UNP P01106 EXPRESSION TAG SEQADV 5I50 MET B -16 UNP P01106 EXPRESSION TAG SEQADV 5I50 SER B -15 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASP B -14 UNP P01106 EXPRESSION TAG SEQADV 5I50 TYR B -13 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASP B -12 UNP P01106 EXPRESSION TAG SEQADV 5I50 ILE B -11 UNP P01106 EXPRESSION TAG SEQADV 5I50 PRO B -10 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR B -9 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR B -8 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLU B -7 UNP P01106 EXPRESSION TAG SEQADV 5I50 ASN B -6 UNP P01106 EXPRESSION TAG SEQADV 5I50 LEU B -5 UNP P01106 EXPRESSION TAG SEQADV 5I50 TYR B -4 UNP P01106 EXPRESSION TAG SEQADV 5I50 PHE B -3 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLN B -2 UNP P01106 EXPRESSION TAG SEQADV 5I50 GLY B -1 UNP P01106 EXPRESSION TAG SEQADV 5I50 ALA B 0 UNP P01106 EXPRESSION TAG SEQADV 5I50 MET B 1 UNP P01106 EXPRESSION TAG SEQADV 5I50 ALA B 2 UNP P01106 EXPRESSION TAG SEQADV 5I50 THR B 63 UNP P01106 GLU 410 ENGINEERED MUTATION SEQADV 5I50 ILE B 70 UNP P01106 GLU 417 ENGINEERED MUTATION SEQADV 5I50 GLN B 76 UNP P01106 ARG 423 ENGINEERED MUTATION SEQADV 5I50 ASN B 77 UNP P01106 ARG 424 ENGINEERED MUTATION SEQRES 1 A 118 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 A 118 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 A 118 MET ALA THR GLU GLU ASN VAL LYS ARG ARG THR HIS ASN SEQRES 4 A 118 VAL LEU GLU ARG GLN ARG ARG ASN GLU LEU LYS ARG SER SEQRES 5 A 118 PHE PHE ALA LEU ARG ASP GLN ILE PRO GLU LEU GLU ASN SEQRES 6 A 118 ASN GLU LYS ALA PRO LYS VAL VAL ILE LEU LYS LYS ALA SEQRES 7 A 118 THR ALA TYR ILE LEU SER VAL GLN ALA GLU THR GLN LYS SEQRES 8 A 118 LEU ILE SER GLU ILE ASP LEU LEU ARG LYS GLN ASN GLU SEQRES 9 A 118 GLN LEU LYS HIS LYS LEU GLU GLN LEU ARG ASN SER CYS SEQRES 10 A 118 ALA SEQRES 1 B 118 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 B 118 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 B 118 MET ALA THR GLU GLU ASN VAL LYS ARG ARG THR HIS ASN SEQRES 4 B 118 VAL LEU GLU ARG GLN ARG ARG ASN GLU LEU LYS ARG SER SEQRES 5 B 118 PHE PHE ALA LEU ARG ASP GLN ILE PRO GLU LEU GLU ASN SEQRES 6 B 118 ASN GLU LYS ALA PRO LYS VAL VAL ILE LEU LYS LYS ALA SEQRES 7 B 118 THR ALA TYR ILE LEU SER VAL GLN ALA GLU THR GLN LYS SEQRES 8 B 118 LEU ILE SER GLU ILE ASP LEU LEU ARG LYS GLN ASN GLU SEQRES 9 B 118 GLN LEU LYS HIS LYS LEU GLU GLN LEU ARG ASN SER CYS SEQRES 10 B 118 ALA SEQRES 1 C 22 DC DA DC DC DC DG DG DT DC DA DC DG DT SEQRES 2 C 22 DG DG DC DC DT DA DC DA DC SEQRES 1 D 22 DG DT DG DT DA DG DG DC DC DA DC DG DT SEQRES 2 D 22 DG DA DC DC DG DG DG DT DG HELIX 1 AA1 MET A 1 GLN A 33 1 33 HELIX 2 AA2 ILE A 34 GLU A 38 5 5 HELIX 3 AA3 PRO A 44 GLN A 86 1 43 HELIX 4 AA4 GLY B -1 ASP B 32 1 34 HELIX 5 AA5 PRO B 44 GLN B 86 1 43 SSBOND 1 CYS A 91 CYS B 91 1555 1555 2.04 CRYST1 36.538 95.545 64.944 90.00 105.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027369 0.000000 0.007798 0.00000 SCALE2 0.000000 0.010466 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016011 0.00000