data_5I5O # _entry.id 5I5O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5I5O WWPDB D_1000218331 # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5I5N _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5I5O _pdbx_database_status.recvd_initial_deposition_date 2016-02-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Y.' 1 'Liang, H.' 2 'Yang, M.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Gen.Virol. _citation.journal_id_ASTM JGVIAY _citation.journal_id_CSD 2058 _citation.journal_id_ISSN 1465-2099 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 97 _citation.language ? _citation.page_first 2149 _citation.page_last 2156 _citation.title 'pH-dependent conformational changes of a Thogoto virus matrix protein reveal mechanisms of viral assembly and uncoating' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1099/jgv.0.000551 _citation.pdbx_database_id_PubMed 27411929 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yang, M.' 1 primary 'Feng, F.' 2 primary 'Liu, Y.' 3 primary 'Wang, H.' 4 primary 'Yang, Z.' 5 primary 'Hou, W.' 6 primary 'Liang, H.' 7 # _cell.entry_id 5I5O _cell.length_a 37.037 _cell.length_b 73.298 _cell.length_c 94.215 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5I5O _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Matrix protein' 17215.727 2 ? ? 'UNP residues 3-151' ? 2 water nat water 18.015 14 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSSNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQSSDLTTTVQVMMVYRFISKRVPEGCFAILSGV NTGMYNPRELKRSYVQSLSSGTSCEFLRSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSSNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQSSDLTTTVQVMMVYRFISKRVPEGCFAILSGV NTGMYNPRELKRSYVQSLSSGTSCEFLRSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 ASN n 1 8 LEU n 1 9 PRO n 1 10 VAL n 1 11 ARG n 1 12 SER n 1 13 PHE n 1 14 SER n 1 15 GLU n 1 16 VAL n 1 17 CYS n 1 18 CYS n 1 19 ALA n 1 20 GLU n 1 21 ALA n 1 22 ARG n 1 23 ALA n 1 24 ALA n 1 25 ILE n 1 26 ILE n 1 27 GLN n 1 28 MET n 1 29 GLU n 1 30 ASN n 1 31 ASN n 1 32 PRO n 1 33 ASP n 1 34 GLU n 1 35 THR n 1 36 VAL n 1 37 CYS n 1 38 ASN n 1 39 ARG n 1 40 ILE n 1 41 TRP n 1 42 LYS n 1 43 ILE n 1 44 HIS n 1 45 ARG n 1 46 ASP n 1 47 LEU n 1 48 GLN n 1 49 SER n 1 50 SER n 1 51 ASP n 1 52 LEU n 1 53 THR n 1 54 THR n 1 55 THR n 1 56 VAL n 1 57 GLN n 1 58 VAL n 1 59 MET n 1 60 MET n 1 61 VAL n 1 62 TYR n 1 63 ARG n 1 64 PHE n 1 65 ILE n 1 66 SER n 1 67 LYS n 1 68 ARG n 1 69 VAL n 1 70 PRO n 1 71 GLU n 1 72 GLY n 1 73 CYS n 1 74 PHE n 1 75 ALA n 1 76 ILE n 1 77 LEU n 1 78 SER n 1 79 GLY n 1 80 VAL n 1 81 ASN n 1 82 THR n 1 83 GLY n 1 84 MET n 1 85 TYR n 1 86 ASN n 1 87 PRO n 1 88 ARG n 1 89 GLU n 1 90 LEU n 1 91 LYS n 1 92 ARG n 1 93 SER n 1 94 TYR n 1 95 VAL n 1 96 GLN n 1 97 SER n 1 98 LEU n 1 99 SER n 1 100 SER n 1 101 GLY n 1 102 THR n 1 103 SER n 1 104 CYS n 1 105 GLU n 1 106 PHE n 1 107 LEU n 1 108 ARG n 1 109 SER n 1 110 LEU n 1 111 ASP n 1 112 LYS n 1 113 LEU n 1 114 ALA n 1 115 LYS n 1 116 ASN n 1 117 LEU n 1 118 LEU n 1 119 ALA n 1 120 VAL n 1 121 HIS n 1 122 VAL n 1 123 CYS n 1 124 SER n 1 125 ASP n 1 126 VAL n 1 127 LYS n 1 128 MET n 1 129 SER n 1 130 LEU n 1 131 ASN n 1 132 LYS n 1 133 ARG n 1 134 GLN n 1 135 VAL n 1 136 ILE n 1 137 ASP n 1 138 PHE n 1 139 ILE n 1 140 SER n 1 141 GLY n 1 142 GLU n 1 143 GLU n 1 144 ASP n 1 145 PRO n 1 146 THR n 1 147 LEU n 1 148 HIS n 1 149 THR n 1 150 ALA n 1 151 GLU n 1 152 HIS n 1 153 LEU n 1 154 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thogoto virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11569 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9E781_9ORTO _struct_ref.pdbx_db_accession Q9E781 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQSSDLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMY NPRELKRSYVQSLSSGTSCEFLRSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLT ; _struct_ref.pdbx_align_begin 3 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5I5O A 6 ? 154 ? Q9E781 3 ? 151 ? 3 151 2 1 5I5O B 6 ? 154 ? Q9E781 3 ? 151 ? 3 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5I5O GLY A 1 ? UNP Q9E781 ? ? 'expression tag' -2 1 1 5I5O PRO A 2 ? UNP Q9E781 ? ? 'expression tag' -1 2 1 5I5O LEU A 3 ? UNP Q9E781 ? ? 'expression tag' 0 3 1 5I5O GLY A 4 ? UNP Q9E781 ? ? 'expression tag' 1 4 1 5I5O SER A 5 ? UNP Q9E781 ? ? 'expression tag' 2 5 2 5I5O GLY B 1 ? UNP Q9E781 ? ? 'expression tag' -2 6 2 5I5O PRO B 2 ? UNP Q9E781 ? ? 'expression tag' -1 7 2 5I5O LEU B 3 ? UNP Q9E781 ? ? 'expression tag' 0 8 2 5I5O GLY B 4 ? UNP Q9E781 ? ? 'expression tag' 1 9 2 5I5O SER B 5 ? UNP Q9E781 ? ? 'expression tag' 2 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5I5O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 33.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M Ammonium citrate tribasic pH 7.0, 20%(w/v) Polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.989 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.989 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5I5O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.682 _reflns.d_resolution_low 34.156 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7381 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.50 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.1 _reflns.pdbx_Rmerge_I_obs 0.1352 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.93 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.68 _reflns_shell.d_res_low 2.75 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.17 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.589 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5I5O _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7381 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.156 _refine.ls_d_res_high 2.682 _refine.ls_percent_reflns_obs 96.64 _refine.ls_R_factor_obs 0.2726 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2712 _refine.ls_R_factor_R_free 0.2852 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.99 _refine.ls_number_reflns_R_free 737 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 35.23 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2052 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 2066 _refine_hist.d_res_high 2.682 _refine_hist.d_res_low 34.156 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.011 ? ? 2080 'X-RAY DIFFRACTION' ? f_angle_d 1.340 ? ? 2800 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.668 ? ? 790 'X-RAY DIFFRACTION' ? f_chiral_restr 0.051 ? ? 326 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 356 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6817 2.8886 1278 0.3333 96.00 0.4134 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.8886 3.1791 1351 0.2940 100.00 0.3331 . . 151 . . . . 'X-RAY DIFFRACTION' . 3.1791 3.6387 1308 0.2783 97.00 0.2965 . . 145 . . . . 'X-RAY DIFFRACTION' . 3.6387 4.5826 1337 0.2592 97.00 0.2771 . . 148 . . . . 'X-RAY DIFFRACTION' . 4.5826 34.1586 1370 0.2574 95.00 0.2495 . . 152 . . . . # _struct.entry_id 5I5O _struct.title 'Crystal Structure of N-terminal Domain of Matrix Protein of Thogoto Virus at Neutral pH.' _struct.pdbx_descriptor 'Matrix protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5I5O _struct_keywords.text 'Viral protein' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 12 ? CYS A 17 ? SER A 9 CYS A 14 1 ? 6 HELX_P HELX_P2 AA2 CYS A 18 ? ASN A 30 ? CYS A 15 ASN A 27 1 ? 13 HELX_P HELX_P3 AA3 ASP A 33 ? ASP A 46 ? ASP A 30 ASP A 43 1 ? 14 HELX_P HELX_P4 AA4 ASP A 51 ? LYS A 67 ? ASP A 48 LYS A 64 1 ? 17 HELX_P HELX_P5 AA5 CYS A 73 ? SER A 78 ? CYS A 70 SER A 75 5 ? 6 HELX_P HELX_P6 AA6 ASN A 86 ? SER A 100 ? ASN A 83 SER A 97 1 ? 15 HELX_P HELX_P7 AA7 THR A 102 ? SER A 109 ? THR A 99 SER A 106 1 ? 8 HELX_P HELX_P8 AA8 ASP A 111 ? ASP A 125 ? ASP A 108 ASP A 122 1 ? 15 HELX_P HELX_P9 AA9 ASN A 131 ? ILE A 139 ? ASN A 128 ILE A 136 1 ? 9 HELX_P HELX_P10 AB1 SER B 12 ? CYS B 17 ? SER B 9 CYS B 14 1 ? 6 HELX_P HELX_P11 AB2 CYS B 18 ? GLU B 20 ? CYS B 15 GLU B 17 5 ? 3 HELX_P HELX_P12 AB3 ALA B 21 ? ASN B 31 ? ALA B 18 ASN B 28 1 ? 11 HELX_P HELX_P13 AB4 GLU B 34 ? ASP B 46 ? GLU B 31 ASP B 43 1 ? 13 HELX_P HELX_P14 AB5 ASP B 51 ? LYS B 67 ? ASP B 48 LYS B 64 1 ? 17 HELX_P HELX_P15 AB6 CYS B 73 ? SER B 78 ? CYS B 70 SER B 75 5 ? 6 HELX_P HELX_P16 AB7 ASN B 86 ? GLY B 101 ? ASN B 83 GLY B 98 1 ? 16 HELX_P HELX_P17 AB8 THR B 102 ? SER B 109 ? THR B 99 SER B 106 1 ? 8 HELX_P HELX_P18 AB9 ASP B 111 ? ASP B 125 ? ASP B 108 ASP B 122 1 ? 15 HELX_P HELX_P19 AC1 ASN B 131 ? SER B 140 ? ASN B 128 SER B 137 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale none ? A ARG 133 NH1 ? ? ? 1_555 A ASP 137 CG ? ? A ARG 130 A ASP 134 1_555 ? ? ? ? ? ? ? 1.570 ? covale2 covale none ? B ARG 11 CD ? ? ? 1_555 B ARG 88 NH1 ? ? B ARG 8 B ARG 85 1_655 ? ? ? ? ? ? ? 1.595 ? covale3 covale none ? B GLU 15 OE1 ? ? ? 1_555 B ARG 88 NE ? ? B GLU 12 B ARG 85 1_655 ? ? ? ? ? ? ? 1.356 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5I5O _atom_sites.fract_transf_matrix[1][1] 0.027000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013643 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010614 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 PRO 2 -1 ? ? ? A . n A 1 3 LEU 3 0 ? ? ? A . n A 1 4 GLY 4 1 ? ? ? A . n A 1 5 SER 5 2 ? ? ? A . n A 1 6 SER 6 3 ? ? ? A . n A 1 7 ASN 7 4 ? ? ? A . n A 1 8 LEU 8 5 ? ? ? A . n A 1 9 PRO 9 6 ? ? ? A . n A 1 10 VAL 10 7 ? ? ? A . n A 1 11 ARG 11 8 8 ARG ARG A . n A 1 12 SER 12 9 9 SER SER A . n A 1 13 PHE 13 10 10 PHE PHE A . n A 1 14 SER 14 11 11 SER SER A . n A 1 15 GLU 15 12 12 GLU GLU A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 CYS 17 14 14 CYS CYS A . n A 1 18 CYS 18 15 15 CYS CYS A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 GLU 20 17 17 GLU GLU A . n A 1 21 ALA 21 18 18 ALA ALA A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 ILE 25 22 22 ILE ILE A . n A 1 26 ILE 26 23 23 ILE ILE A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 MET 28 25 25 MET MET A . n A 1 29 GLU 29 26 26 GLU GLU A . n A 1 30 ASN 30 27 27 ASN ASN A . n A 1 31 ASN 31 28 28 ASN ASN A . n A 1 32 PRO 32 29 29 PRO PRO A . n A 1 33 ASP 33 30 30 ASP ASP A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 THR 35 32 32 THR THR A . n A 1 36 VAL 36 33 33 VAL VAL A . n A 1 37 CYS 37 34 34 CYS CYS A . n A 1 38 ASN 38 35 35 ASN ASN A . n A 1 39 ARG 39 36 36 ARG ARG A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 TRP 41 38 38 TRP TRP A . n A 1 42 LYS 42 39 39 LYS LYS A . n A 1 43 ILE 43 40 40 ILE ILE A . n A 1 44 HIS 44 41 41 HIS HIS A . n A 1 45 ARG 45 42 42 ARG ARG A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 GLN 48 45 45 GLN GLN A . n A 1 49 SER 49 46 46 SER SER A . n A 1 50 SER 50 47 47 SER SER A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 LEU 52 49 49 LEU LEU A . n A 1 53 THR 53 50 50 THR THR A . n A 1 54 THR 54 51 51 THR THR A . n A 1 55 THR 55 52 52 THR THR A . n A 1 56 VAL 56 53 53 VAL VAL A . n A 1 57 GLN 57 54 54 GLN GLN A . n A 1 58 VAL 58 55 55 VAL VAL A . n A 1 59 MET 59 56 56 MET MET A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 VAL 61 58 58 VAL VAL A . n A 1 62 TYR 62 59 59 TYR TYR A . n A 1 63 ARG 63 60 60 ARG ARG A . n A 1 64 PHE 64 61 61 PHE PHE A . n A 1 65 ILE 65 62 62 ILE ILE A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 ARG 68 65 65 ARG ARG A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PRO 70 67 67 PRO PRO A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 GLY 72 69 69 GLY GLY A . n A 1 73 CYS 73 70 70 CYS CYS A . n A 1 74 PHE 74 71 71 PHE PHE A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ILE 76 73 73 ILE ILE A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 SER 78 75 75 SER SER A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 ASN 81 78 78 ASN ASN A . n A 1 82 THR 82 79 79 THR THR A . n A 1 83 GLY 83 80 80 GLY GLY A . n A 1 84 MET 84 81 81 MET MET A . n A 1 85 TYR 85 82 82 TYR TYR A . n A 1 86 ASN 86 83 83 ASN ASN A . n A 1 87 PRO 87 84 84 PRO PRO A . n A 1 88 ARG 88 85 85 ARG ARG A . n A 1 89 GLU 89 86 86 GLU GLU A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 LYS 91 88 88 LYS LYS A . n A 1 92 ARG 92 89 89 ARG ARG A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 TYR 94 91 91 TYR TYR A . n A 1 95 VAL 95 92 92 VAL VAL A . n A 1 96 GLN 96 93 93 GLN GLN A . n A 1 97 SER 97 94 94 SER SER A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 SER 99 96 96 SER SER A . n A 1 100 SER 100 97 97 SER SER A . n A 1 101 GLY 101 98 98 GLY GLY A . n A 1 102 THR 102 99 99 THR THR A . n A 1 103 SER 103 100 100 SER SER A . n A 1 104 CYS 104 101 101 CYS CYS A . n A 1 105 GLU 105 102 102 GLU GLU A . n A 1 106 PHE 106 103 103 PHE PHE A . n A 1 107 LEU 107 104 104 LEU LEU A . n A 1 108 ARG 108 105 105 ARG ARG A . n A 1 109 SER 109 106 106 SER SER A . n A 1 110 LEU 110 107 107 LEU LEU A . n A 1 111 ASP 111 108 108 ASP ASP A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 LEU 113 110 110 LEU LEU A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 LYS 115 112 112 LYS LYS A . n A 1 116 ASN 116 113 113 ASN ASN A . n A 1 117 LEU 117 114 114 LEU LEU A . n A 1 118 LEU 118 115 115 LEU LEU A . n A 1 119 ALA 119 116 116 ALA ALA A . n A 1 120 VAL 120 117 117 VAL VAL A . n A 1 121 HIS 121 118 118 HIS HIS A . n A 1 122 VAL 122 119 119 VAL VAL A . n A 1 123 CYS 123 120 120 CYS CYS A . n A 1 124 SER 124 121 121 SER SER A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 LYS 127 124 124 LYS LYS A . n A 1 128 MET 128 125 125 MET MET A . n A 1 129 SER 129 126 126 SER SER A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 ASN 131 128 128 ASN ASN A . n A 1 132 LYS 132 129 129 LYS LYS A . n A 1 133 ARG 133 130 130 ARG ARG A . n A 1 134 GLN 134 131 131 GLN GLN A . n A 1 135 VAL 135 132 132 VAL VAL A . n A 1 136 ILE 136 133 133 ILE ILE A . n A 1 137 ASP 137 134 134 ASP ASP A . n A 1 138 PHE 138 135 135 PHE PHE A . n A 1 139 ILE 139 136 136 ILE ILE A . n A 1 140 SER 140 137 137 SER SER A . n A 1 141 GLY 141 138 ? ? ? A . n A 1 142 GLU 142 139 ? ? ? A . n A 1 143 GLU 143 140 ? ? ? A . n A 1 144 ASP 144 141 ? ? ? A . n A 1 145 PRO 145 142 ? ? ? A . n A 1 146 THR 146 143 ? ? ? A . n A 1 147 LEU 147 144 ? ? ? A . n A 1 148 HIS 148 145 ? ? ? A . n A 1 149 THR 149 146 ? ? ? A . n A 1 150 ALA 150 147 ? ? ? A . n A 1 151 GLU 151 148 ? ? ? A . n A 1 152 HIS 152 149 ? ? ? A . n A 1 153 LEU 153 150 ? ? ? A . n A 1 154 THR 154 151 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 PRO 2 -1 ? ? ? B . n B 1 3 LEU 3 0 ? ? ? B . n B 1 4 GLY 4 1 ? ? ? B . n B 1 5 SER 5 2 ? ? ? B . n B 1 6 SER 6 3 ? ? ? B . n B 1 7 ASN 7 4 ? ? ? B . n B 1 8 LEU 8 5 ? ? ? B . n B 1 9 PRO 9 6 ? ? ? B . n B 1 10 VAL 10 7 ? ? ? B . n B 1 11 ARG 11 8 8 ARG ARG B . n B 1 12 SER 12 9 9 SER SER B . n B 1 13 PHE 13 10 10 PHE PHE B . n B 1 14 SER 14 11 11 SER SER B . n B 1 15 GLU 15 12 12 GLU GLU B . n B 1 16 VAL 16 13 13 VAL VAL B . n B 1 17 CYS 17 14 14 CYS CYS B . n B 1 18 CYS 18 15 15 CYS CYS B . n B 1 19 ALA 19 16 16 ALA ALA B . n B 1 20 GLU 20 17 17 GLU GLU B . n B 1 21 ALA 21 18 18 ALA ALA B . n B 1 22 ARG 22 19 19 ARG ARG B . n B 1 23 ALA 23 20 20 ALA ALA B . n B 1 24 ALA 24 21 21 ALA ALA B . n B 1 25 ILE 25 22 22 ILE ILE B . n B 1 26 ILE 26 23 23 ILE ILE B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 MET 28 25 25 MET MET B . n B 1 29 GLU 29 26 26 GLU GLU B . n B 1 30 ASN 30 27 27 ASN ASN B . n B 1 31 ASN 31 28 28 ASN ASN B . n B 1 32 PRO 32 29 29 PRO PRO B . n B 1 33 ASP 33 30 30 ASP ASP B . n B 1 34 GLU 34 31 31 GLU GLU B . n B 1 35 THR 35 32 32 THR THR B . n B 1 36 VAL 36 33 33 VAL VAL B . n B 1 37 CYS 37 34 34 CYS CYS B . n B 1 38 ASN 38 35 35 ASN ASN B . n B 1 39 ARG 39 36 36 ARG ARG B . n B 1 40 ILE 40 37 37 ILE ILE B . n B 1 41 TRP 41 38 38 TRP TRP B . n B 1 42 LYS 42 39 39 LYS LYS B . n B 1 43 ILE 43 40 40 ILE ILE B . n B 1 44 HIS 44 41 41 HIS HIS B . n B 1 45 ARG 45 42 42 ARG ARG B . n B 1 46 ASP 46 43 43 ASP ASP B . n B 1 47 LEU 47 44 44 LEU LEU B . n B 1 48 GLN 48 45 45 GLN GLN B . n B 1 49 SER 49 46 46 SER SER B . n B 1 50 SER 50 47 47 SER SER B . n B 1 51 ASP 51 48 48 ASP ASP B . n B 1 52 LEU 52 49 49 LEU LEU B . n B 1 53 THR 53 50 50 THR THR B . n B 1 54 THR 54 51 51 THR THR B . n B 1 55 THR 55 52 52 THR THR B . n B 1 56 VAL 56 53 53 VAL VAL B . n B 1 57 GLN 57 54 54 GLN GLN B . n B 1 58 VAL 58 55 55 VAL VAL B . n B 1 59 MET 59 56 56 MET MET B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 VAL 61 58 58 VAL VAL B . n B 1 62 TYR 62 59 59 TYR TYR B . n B 1 63 ARG 63 60 60 ARG ARG B . n B 1 64 PHE 64 61 61 PHE PHE B . n B 1 65 ILE 65 62 62 ILE ILE B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 LYS 67 64 64 LYS LYS B . n B 1 68 ARG 68 65 65 ARG ARG B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PRO 70 67 67 PRO PRO B . n B 1 71 GLU 71 68 68 GLU GLU B . n B 1 72 GLY 72 69 69 GLY GLY B . n B 1 73 CYS 73 70 70 CYS CYS B . n B 1 74 PHE 74 71 71 PHE PHE B . n B 1 75 ALA 75 72 72 ALA ALA B . n B 1 76 ILE 76 73 73 ILE ILE B . n B 1 77 LEU 77 74 74 LEU LEU B . n B 1 78 SER 78 75 75 SER SER B . n B 1 79 GLY 79 76 76 GLY GLY B . n B 1 80 VAL 80 77 77 VAL VAL B . n B 1 81 ASN 81 78 78 ASN ASN B . n B 1 82 THR 82 79 79 THR THR B . n B 1 83 GLY 83 80 80 GLY GLY B . n B 1 84 MET 84 81 81 MET MET B . n B 1 85 TYR 85 82 82 TYR TYR B . n B 1 86 ASN 86 83 83 ASN ASN B . n B 1 87 PRO 87 84 84 PRO PRO B . n B 1 88 ARG 88 85 85 ARG ARG B . n B 1 89 GLU 89 86 86 GLU GLU B . n B 1 90 LEU 90 87 87 LEU LEU B . n B 1 91 LYS 91 88 88 LYS LYS B . n B 1 92 ARG 92 89 89 ARG ARG B . n B 1 93 SER 93 90 90 SER SER B . n B 1 94 TYR 94 91 91 TYR TYR B . n B 1 95 VAL 95 92 92 VAL VAL B . n B 1 96 GLN 96 93 93 GLN GLN B . n B 1 97 SER 97 94 94 SER SER B . n B 1 98 LEU 98 95 95 LEU LEU B . n B 1 99 SER 99 96 96 SER SER B . n B 1 100 SER 100 97 97 SER SER B . n B 1 101 GLY 101 98 98 GLY GLY B . n B 1 102 THR 102 99 99 THR THR B . n B 1 103 SER 103 100 100 SER SER B . n B 1 104 CYS 104 101 101 CYS CYS B . n B 1 105 GLU 105 102 102 GLU GLU B . n B 1 106 PHE 106 103 103 PHE PHE B . n B 1 107 LEU 107 104 104 LEU LEU B . n B 1 108 ARG 108 105 105 ARG ARG B . n B 1 109 SER 109 106 106 SER SER B . n B 1 110 LEU 110 107 107 LEU LEU B . n B 1 111 ASP 111 108 108 ASP ASP B . n B 1 112 LYS 112 109 109 LYS LYS B . n B 1 113 LEU 113 110 110 LEU LEU B . n B 1 114 ALA 114 111 111 ALA ALA B . n B 1 115 LYS 115 112 112 LYS LYS B . n B 1 116 ASN 116 113 113 ASN ASN B . n B 1 117 LEU 117 114 114 LEU LEU B . n B 1 118 LEU 118 115 115 LEU LEU B . n B 1 119 ALA 119 116 116 ALA ALA B . n B 1 120 VAL 120 117 117 VAL VAL B . n B 1 121 HIS 121 118 118 HIS HIS B . n B 1 122 VAL 122 119 119 VAL VAL B . n B 1 123 CYS 123 120 120 CYS CYS B . n B 1 124 SER 124 121 121 SER SER B . n B 1 125 ASP 125 122 122 ASP ASP B . n B 1 126 VAL 126 123 123 VAL VAL B . n B 1 127 LYS 127 124 124 LYS LYS B . n B 1 128 MET 128 125 125 MET MET B . n B 1 129 SER 129 126 126 SER SER B . n B 1 130 LEU 130 127 127 LEU LEU B . n B 1 131 ASN 131 128 128 ASN ASN B . n B 1 132 LYS 132 129 129 LYS LYS B . n B 1 133 ARG 133 130 130 ARG ARG B . n B 1 134 GLN 134 131 131 GLN GLN B . n B 1 135 VAL 135 132 132 VAL VAL B . n B 1 136 ILE 136 133 133 ILE ILE B . n B 1 137 ASP 137 134 134 ASP ASP B . n B 1 138 PHE 138 135 135 PHE PHE B . n B 1 139 ILE 139 136 136 ILE ILE B . n B 1 140 SER 140 137 137 SER SER B . n B 1 141 GLY 141 138 ? ? ? B . n B 1 142 GLU 142 139 ? ? ? B . n B 1 143 GLU 143 140 ? ? ? B . n B 1 144 ASP 144 141 ? ? ? B . n B 1 145 PRO 145 142 ? ? ? B . n B 1 146 THR 146 143 ? ? ? B . n B 1 147 LEU 147 144 ? ? ? B . n B 1 148 HIS 148 145 ? ? ? B . n B 1 149 THR 149 146 ? ? ? B . n B 1 150 ALA 150 147 ? ? ? B . n B 1 151 GLU 151 148 ? ? ? B . n B 1 152 HIS 152 149 ? ? ? B . n B 1 153 LEU 153 150 ? ? ? B . n B 1 154 THR 154 151 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 9 HOH HOH A . C 2 HOH 2 202 7 HOH HOH A . C 2 HOH 3 203 12 HOH HOH A . C 2 HOH 4 204 5 HOH HOH A . D 2 HOH 1 201 4 HOH HOH B . D 2 HOH 2 202 6 HOH HOH B . D 2 HOH 3 203 3 HOH HOH B . D 2 HOH 4 204 1 HOH HOH B . D 2 HOH 5 205 13 HOH HOH B . D 2 HOH 6 206 2 HOH HOH B . D 2 HOH 7 207 8 HOH HOH B . D 2 HOH 8 208 14 HOH HOH B . D 2 HOH 9 209 11 HOH HOH B . D 2 HOH 10 210 10 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-17 2 'Structure model' 1 1 2016-10-12 3 'Structure model' 1 2 2017-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' diffrn_detector 3 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_diffrn_detector.detector' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 130 ? ? OD1 A ASP 134 ? ? 1.10 2 1 CZ A ARG 130 ? ? OD1 A ASP 134 ? ? 1.65 3 1 OD1 A ASP 48 ? ? N A LEU 49 ? ? 1.80 4 1 O B ARG 85 ? ? O B HOH 201 ? ? 1.82 5 1 O B ARG 89 ? ? O B HOH 202 ? ? 1.84 6 1 ND1 B HIS 118 ? ? O B HOH 203 ? ? 1.85 7 1 NH2 A ARG 130 ? ? OD1 A ASP 134 ? ? 1.89 8 1 N B ALA 20 ? ? O B HOH 204 ? ? 2.00 9 1 SD B MET 56 ? ? O B HOH 210 ? ? 2.06 10 1 O B SER 11 ? ? NH2 B ARG 19 ? ? 2.08 11 1 O A ILE 40 ? ? O A HOH 201 ? ? 2.09 12 1 N B SER 47 ? ? O B HOH 205 ? ? 2.09 13 1 C B SER 46 ? ? O B HOH 205 ? ? 2.11 14 1 N A GLU 17 ? ? O A HOH 202 ? ? 2.11 15 1 CG B ARG 89 ? ? O B HOH 202 ? ? 2.12 16 1 NH1 A ARG 130 ? ? OD2 A ASP 134 ? ? 2.12 17 1 C B ARG 85 ? ? O B HOH 201 ? ? 2.14 18 1 OG B SER 97 ? ? OG1 B THR 99 ? ? 2.17 19 1 OE1 A GLN 24 ? ? O A HOH 203 ? ? 2.17 20 1 O A ILE 133 ? ? OG A SER 137 ? ? 2.18 21 1 CG A GLU 17 ? ? O A HOH 202 ? ? 2.19 22 1 NE2 B GLN 24 ? ? O B HOH 206 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE1 B GLU 12 ? ? 1_555 CZ B ARG 85 ? ? 1_655 1.88 2 1 CB B ARG 8 ? ? 1_555 NH2 B ARG 85 ? ? 1_655 2.03 3 1 OE1 B GLU 12 ? ? 1_555 NH2 B ARG 85 ? ? 1_655 2.04 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 44 ? ? CA A LEU 44 ? ? C A LEU 44 ? ? 122.01 110.20 11.81 1.90 N 2 1 CB A GLN 45 ? ? CA A GLN 45 ? ? C A GLN 45 ? ? 96.36 110.40 -14.04 2.00 N 3 1 N A GLN 45 ? ? CA A GLN 45 ? ? C A GLN 45 ? ? 127.92 111.00 16.92 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 14 ? ? -69.79 -177.71 2 1 ASN A 28 ? ? -153.36 71.63 3 1 PRO A 29 ? ? -73.01 20.27 4 1 SER A 46 ? ? -156.45 17.29 5 1 MET B 125 ? ? -163.16 96.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A PRO -1 ? A PRO 2 3 1 Y 1 A LEU 0 ? A LEU 3 4 1 Y 1 A GLY 1 ? A GLY 4 5 1 Y 1 A SER 2 ? A SER 5 6 1 Y 1 A SER 3 ? A SER 6 7 1 Y 1 A ASN 4 ? A ASN 7 8 1 Y 1 A LEU 5 ? A LEU 8 9 1 Y 1 A PRO 6 ? A PRO 9 10 1 Y 1 A VAL 7 ? A VAL 10 11 1 Y 1 A GLY 138 ? A GLY 141 12 1 Y 1 A GLU 139 ? A GLU 142 13 1 Y 1 A GLU 140 ? A GLU 143 14 1 Y 1 A ASP 141 ? A ASP 144 15 1 Y 1 A PRO 142 ? A PRO 145 16 1 Y 1 A THR 143 ? A THR 146 17 1 Y 1 A LEU 144 ? A LEU 147 18 1 Y 1 A HIS 145 ? A HIS 148 19 1 Y 1 A THR 146 ? A THR 149 20 1 Y 1 A ALA 147 ? A ALA 150 21 1 Y 1 A GLU 148 ? A GLU 151 22 1 Y 1 A HIS 149 ? A HIS 152 23 1 Y 1 A LEU 150 ? A LEU 153 24 1 Y 1 A THR 151 ? A THR 154 25 1 Y 1 B GLY -2 ? B GLY 1 26 1 Y 1 B PRO -1 ? B PRO 2 27 1 Y 1 B LEU 0 ? B LEU 3 28 1 Y 1 B GLY 1 ? B GLY 4 29 1 Y 1 B SER 2 ? B SER 5 30 1 Y 1 B SER 3 ? B SER 6 31 1 Y 1 B ASN 4 ? B ASN 7 32 1 Y 1 B LEU 5 ? B LEU 8 33 1 Y 1 B PRO 6 ? B PRO 9 34 1 Y 1 B VAL 7 ? B VAL 10 35 1 Y 1 B GLY 138 ? B GLY 141 36 1 Y 1 B GLU 139 ? B GLU 142 37 1 Y 1 B GLU 140 ? B GLU 143 38 1 Y 1 B ASP 141 ? B ASP 144 39 1 Y 1 B PRO 142 ? B PRO 145 40 1 Y 1 B THR 143 ? B THR 146 41 1 Y 1 B LEU 144 ? B LEU 147 42 1 Y 1 B HIS 145 ? B HIS 148 43 1 Y 1 B THR 146 ? B THR 149 44 1 Y 1 B ALA 147 ? B ALA 150 45 1 Y 1 B GLU 148 ? B GLU 151 46 1 Y 1 B HIS 149 ? B HIS 152 47 1 Y 1 B LEU 150 ? B LEU 153 48 1 Y 1 B THR 151 ? B THR 154 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #