HEADER TRANSPORT PROTEIN 15-FEB-16 5I5P TITLE CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING PROTEIN TITLE 2 SPECIFIC FOR AROMATIC ACID LIGANDS (SORCERER II GLOBAL OCEAN SAMPLING TITLE 3 EXPEDITION, UNIDENTIFIED MICROBE, LOCUS TAG GOS_1523157) IN COMPLEX TITLE 4 WITH CO-PURIFIED 4-HYDROXYBENZOATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP TRANSPORTER SOLUTE BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED MARINE BACTERIUM; SOURCE 3 ORGANISM_TAXID: 56765; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: T7 EXPRESS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PET23 KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,S.L.HOGLE,C.L.DUPONT,S.C.ALMO REVDAT 4 15-NOV-23 5I5P 1 REMARK REVDAT 3 27-SEP-23 5I5P 1 REMARK REVDAT 2 31-JAN-18 5I5P 1 REMARK REVDAT 1 18-JAN-17 5I5P 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,S.L.HOGLE,C.L.DUPONT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING JRNL TITL 2 PROTEIN SPECIFIC FOR AROMATIC ACID LIGANDS (SORCERER II JRNL TITL 3 GLOBAL OCEAN SAMPLING EXPEDITION, UNIDENTIFIED MICROBE, JRNL TITL 4 LOCUS TAG GOS_1523157) IN COMPLEX WITH CO-PURIFIED JRNL TITL 5 4-HYDROXYBENZOATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 69798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2299 - 4.6722 0.99 2887 166 0.1537 0.1942 REMARK 3 2 4.6722 - 3.7096 1.00 2884 155 0.1269 0.1429 REMARK 3 3 3.7096 - 3.2411 1.00 2876 150 0.1413 0.1720 REMARK 3 4 3.2411 - 2.9449 0.99 2781 168 0.1461 0.1722 REMARK 3 5 2.9449 - 2.7339 0.98 2807 141 0.1443 0.1838 REMARK 3 6 2.7339 - 2.5727 0.99 2814 176 0.1473 0.2048 REMARK 3 7 2.5727 - 2.4439 1.00 2845 145 0.1398 0.1807 REMARK 3 8 2.4439 - 2.3376 1.00 2880 160 0.1346 0.1637 REMARK 3 9 2.3376 - 2.2476 1.00 2839 152 0.1273 0.1655 REMARK 3 10 2.2476 - 2.1700 0.98 2790 141 0.1240 0.1690 REMARK 3 11 2.1700 - 2.1022 0.96 2715 148 0.1373 0.1721 REMARK 3 12 2.1022 - 2.0421 0.94 2701 131 0.1399 0.1865 REMARK 3 13 2.0421 - 1.9883 0.93 2670 133 0.1543 0.2009 REMARK 3 14 1.9883 - 1.9398 0.91 2557 140 0.1549 0.1994 REMARK 3 15 1.9398 - 1.8957 0.90 2580 143 0.1537 0.2063 REMARK 3 16 1.8957 - 1.8554 0.89 2528 125 0.1689 0.1971 REMARK 3 17 1.8554 - 1.8183 0.89 2572 117 0.1606 0.2074 REMARK 3 18 1.8183 - 1.7840 0.88 2498 122 0.1554 0.1791 REMARK 3 19 1.7840 - 1.7521 0.88 2533 122 0.1539 0.2111 REMARK 3 20 1.7521 - 1.7224 0.87 2455 137 0.1479 0.1948 REMARK 3 21 1.7224 - 1.6946 0.87 2490 158 0.1536 0.1998 REMARK 3 22 1.6946 - 1.6686 0.86 2447 124 0.1579 0.1882 REMARK 3 23 1.6686 - 1.6440 0.85 2381 158 0.1602 0.2145 REMARK 3 24 1.6440 - 1.6209 0.85 2469 112 0.1721 0.2333 REMARK 3 25 1.6209 - 1.5990 0.81 2265 110 0.1949 0.2044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 5056 REMARK 3 ANGLE : 1.116 6844 REMARK 3 CHIRALITY : 0.060 760 REMARK 3 PLANARITY : 0.009 877 REMARK 3 DIHEDRAL : 13.216 3065 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I5P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.547 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF ARC SEC OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70021 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.599 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5I7I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M POTASSIUM BROMIDE, 30 %(W/V) REMARK 280 PEG MME 2000, PH 7.5, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.24600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 ASP A 13 REMARK 465 LEU A 14 REMARK 465 GLY A 15 REMARK 465 THR A 16 REMARK 465 GLU A 17 REMARK 465 ASN A 18 REMARK 465 LEU A 19 REMARK 465 TYR A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 SER A 23 REMARK 465 MSE B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 SER B 9 REMARK 465 SER B 10 REMARK 465 GLY B 11 REMARK 465 VAL B 12 REMARK 465 ASP B 13 REMARK 465 LEU B 14 REMARK 465 GLY B 15 REMARK 465 THR B 16 REMARK 465 GLU B 17 REMARK 465 ASN B 18 REMARK 465 LEU B 19 REMARK 465 TYR B 20 REMARK 465 PHE B 21 REMARK 465 GLN B 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 313 O HOH A 503 1.50 REMARK 500 HZ2 LYS B 167 O HOH B 502 1.55 REMARK 500 O4 PEG B 404 O HOH B 501 1.82 REMARK 500 O HOH B 535 O HOH B 548 1.99 REMARK 500 O HOH A 766 O HOH A 829 2.02 REMARK 500 O HOH A 755 O HOH A 768 2.05 REMARK 500 O HOH B 761 O HOH B 812 2.06 REMARK 500 O HOH A 741 O HOH A 765 2.06 REMARK 500 O HOH A 531 O HOH A 791 2.18 REMARK 500 O HOH A 803 O HOH A 817 2.18 REMARK 500 O HOH B 610 O HOH B 740 2.19 REMARK 500 O HOH B 812 O HOH B 821 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 551 O HOH B 503 2555 1.97 REMARK 500 O HOH A 798 O HOH A 827 1455 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 166 CG - SE - CE ANGL. DEV. = -17.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 44 -67.44 -131.63 REMARK 500 ALA A 113 -145.56 -97.42 REMARK 500 THR A 128 -101.89 -123.31 REMARK 500 GLU A 154 -21.11 -146.70 REMARK 500 PHE B 44 -66.73 -132.07 REMARK 500 ALA B 113 -146.60 -91.63 REMARK 500 THR B 128 -101.03 -122.13 REMARK 500 GLU B 154 -25.41 -142.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 856 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 857 DISTANCE = 6.21 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHB A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHB B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I7I RELATED DB: PDB DBREF 5I5P A 2 342 PDB 5I5P 5I5P 2 342 DBREF 5I5P B 2 342 PDB 5I5P 5I5P 2 342 SEQRES 1 A 341 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 341 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLU VAL VAL SEQRES 3 A 341 LEU LYS PHE HIS SER PHE PRO PRO MSE PRO ALA ASN SER SEQRES 4 A 341 ASN ALA LYS PHE VAL LYS PRO TRP SER GLU LYS VAL LEU SEQRES 5 A 341 ALA GLU SER ASN GLY GLU ILE LYS VAL GLU ILE TYR PRO SEQRES 6 A 341 ALA MSE GLN LEU GLY GLY LYS PRO PRO GLN LEU VAL ASP SEQRES 7 A 341 GLN VAL ARG ASP GLY VAL VAL ASP ILE VAL TRP THR VAL SEQRES 8 A 341 ALA GLY TYR THR PRO GLY ARG PHE PRO HIS LEU GLU ALA SEQRES 9 A 341 PHE GLU LEU PRO PHE MSE PRO ALA SER ALA GLU ALA THR SEQRES 10 A 341 SER GLN ALA LEU GLN GLU TYR VAL ASP THR VAL ALA ALA SEQRES 11 A 341 SER ASP LEU LYS ASP TYR LYS VAL LEU ALA VAL PHE CYS SEQRES 12 A 341 HIS ALA PRO GLY LYS ILE HIS THR LYS GLU LYS VAL ILE SEQRES 13 A 341 LYS SER ALA ALA ASP LEU ASN GLY MSE LYS MSE ARG GLY SEQRES 14 A 341 PRO THR ARG VAL ILE THR LYS MSE LEU GLU GLY LEU GLY SEQRES 15 A 341 ALA THR PRO VAL GLY MSE PRO VAL PRO ALA VAL ALA GLY SEQRES 16 A 341 ALA LEU SER LYS GLY VAL ILE ASP GLY MSE VAL VAL PRO SEQRES 17 A 341 TRP GLU ILE MSE PRO SER PHE LYS LEU HIS GLU LEU THR SEQRES 18 A 341 LYS ALA HIS THR THR VAL SER GLY SER ARG GLY LEU TYR SEQRES 19 A 341 THR THR PRO PHE LEU PHE LEU MSE ASN LYS ALA LYS TYR SEQRES 20 A 341 GLU SER LEU SER ASP GLU HIS LYS LYS VAL ILE ASP ASN SEQRES 21 A 341 ASN ALA GLY LEU ALA LEU ALA LYS LEU ALA GLY GLN LEU SEQRES 22 A 341 TRP ASP GLY PHE GLU VAL PRO ALA ARG LYS LEU ALA LEU SEQRES 23 A 341 ASP ALA GLY GLY THR ILE HIS SER LEU SER GLY GLY PRO SEQRES 24 A 341 LEU ALA GLU MSE LYS ALA ALA GLY GLU GLY LEU GLU LYS SEQRES 25 A 341 ASP TRP ILE LYS SER ALA ASN ASP ARG GLY LEU ASP GLY SEQRES 26 A 341 ALA MSE LEU VAL LYS THR ALA LYS ASP LEU ILE SER LYS SEQRES 27 A 341 TYR ASP LYS SEQRES 1 B 341 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 341 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLU VAL VAL SEQRES 3 B 341 LEU LYS PHE HIS SER PHE PRO PRO MSE PRO ALA ASN SER SEQRES 4 B 341 ASN ALA LYS PHE VAL LYS PRO TRP SER GLU LYS VAL LEU SEQRES 5 B 341 ALA GLU SER ASN GLY GLU ILE LYS VAL GLU ILE TYR PRO SEQRES 6 B 341 ALA MSE GLN LEU GLY GLY LYS PRO PRO GLN LEU VAL ASP SEQRES 7 B 341 GLN VAL ARG ASP GLY VAL VAL ASP ILE VAL TRP THR VAL SEQRES 8 B 341 ALA GLY TYR THR PRO GLY ARG PHE PRO HIS LEU GLU ALA SEQRES 9 B 341 PHE GLU LEU PRO PHE MSE PRO ALA SER ALA GLU ALA THR SEQRES 10 B 341 SER GLN ALA LEU GLN GLU TYR VAL ASP THR VAL ALA ALA SEQRES 11 B 341 SER ASP LEU LYS ASP TYR LYS VAL LEU ALA VAL PHE CYS SEQRES 12 B 341 HIS ALA PRO GLY LYS ILE HIS THR LYS GLU LYS VAL ILE SEQRES 13 B 341 LYS SER ALA ALA ASP LEU ASN GLY MSE LYS MSE ARG GLY SEQRES 14 B 341 PRO THR ARG VAL ILE THR LYS MSE LEU GLU GLY LEU GLY SEQRES 15 B 341 ALA THR PRO VAL GLY MSE PRO VAL PRO ALA VAL ALA GLY SEQRES 16 B 341 ALA LEU SER LYS GLY VAL ILE ASP GLY MSE VAL VAL PRO SEQRES 17 B 341 TRP GLU ILE MSE PRO SER PHE LYS LEU HIS GLU LEU THR SEQRES 18 B 341 LYS ALA HIS THR THR VAL SER GLY SER ARG GLY LEU TYR SEQRES 19 B 341 THR THR PRO PHE LEU PHE LEU MSE ASN LYS ALA LYS TYR SEQRES 20 B 341 GLU SER LEU SER ASP GLU HIS LYS LYS VAL ILE ASP ASN SEQRES 21 B 341 ASN ALA GLY LEU ALA LEU ALA LYS LEU ALA GLY GLN LEU SEQRES 22 B 341 TRP ASP GLY PHE GLU VAL PRO ALA ARG LYS LEU ALA LEU SEQRES 23 B 341 ASP ALA GLY GLY THR ILE HIS SER LEU SER GLY GLY PRO SEQRES 24 B 341 LEU ALA GLU MSE LYS ALA ALA GLY GLU GLY LEU GLU LYS SEQRES 25 B 341 ASP TRP ILE LYS SER ALA ASN ASP ARG GLY LEU ASP GLY SEQRES 26 B 341 ALA MSE LEU VAL LYS THR ALA LYS ASP LEU ILE SER LYS SEQRES 27 B 341 TYR ASP LYS HET MSE A 24 16 HET MSE A 36 17 HET MSE A 68 17 HET MSE A 111 17 HET MSE A 166 20 HET MSE A 168 10 HET MSE A 178 10 HET MSE A 189 17 HET MSE A 206 10 HET MSE A 213 17 HET MSE A 243 17 HET MSE A 304 17 HET MSE A 328 34 HET MSE B 24 16 HET MSE B 36 34 HET MSE B 68 17 HET MSE B 111 17 HET MSE B 166 16 HET MSE B 168 17 HET MSE B 178 17 HET MSE B 189 17 HET MSE B 206 17 HET MSE B 213 17 HET MSE B 243 17 HET MSE B 304 17 HET MSE B 328 17 HET PHB A 401 15 HET PEG A 402 17 HET BR A 403 1 HET BR A 404 1 HET BR A 405 1 HET PHB B 401 15 HET PEG B 402 17 HET PEG B 403 17 HET PEG B 404 17 HET BR B 405 1 HET BR B 406 1 HET BR B 407 1 HETNAM MSE SELENOMETHIONINE HETNAM PHB P-HYDROXYBENZOIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM BR BROMIDE ION FORMUL 1 MSE 26(C5 H11 N O2 SE) FORMUL 3 PHB 2(C7 H6 O3) FORMUL 4 PEG 4(C4 H10 O3) FORMUL 5 BR 6(BR 1-) FORMUL 15 HOH *749(H2 O) HELIX 1 AA1 ALA A 38 LYS A 43 1 6 HELIX 2 AA2 PHE A 44 SER A 56 1 13 HELIX 3 AA3 LYS A 73 PRO A 75 5 3 HELIX 4 AA4 GLN A 76 ASP A 83 1 8 HELIX 5 AA5 GLY A 94 THR A 96 5 3 HELIX 6 AA6 PHE A 100 LEU A 108 5 9 HELIX 7 AA7 SER A 114 THR A 128 1 15 HELIX 8 AA8 ALA A 130 LYS A 135 5 6 HELIX 9 AA9 SER A 159 ASN A 164 5 6 HELIX 10 AB1 THR A 172 LEU A 182 1 11 HELIX 11 AB2 PRO A 190 PRO A 192 5 3 HELIX 12 AB3 ALA A 193 LYS A 200 1 8 HELIX 13 AB4 PRO A 209 PHE A 216 5 8 HELIX 14 AB5 LYS A 217 THR A 222 1 6 HELIX 15 AB6 LYS A 245 LEU A 251 1 7 HELIX 16 AB7 SER A 252 ASN A 262 1 11 HELIX 17 AB8 GLY A 264 ALA A 289 1 26 HELIX 18 AB9 SER A 297 ARG A 322 1 26 HELIX 19 AC1 ASP A 325 ASP A 341 1 17 HELIX 20 AC2 ALA B 38 LYS B 43 1 6 HELIX 21 AC3 PHE B 44 SER B 56 1 13 HELIX 22 AC4 LYS B 73 PRO B 75 5 3 HELIX 23 AC5 GLN B 76 ASP B 83 1 8 HELIX 24 AC6 GLY B 94 THR B 96 5 3 HELIX 25 AC7 PHE B 100 LEU B 108 5 9 HELIX 26 AC8 SER B 114 THR B 128 1 15 HELIX 27 AC9 ALA B 130 LYS B 135 5 6 HELIX 28 AD1 SER B 159 ASN B 164 5 6 HELIX 29 AD2 THR B 172 LEU B 182 1 11 HELIX 30 AD3 PRO B 190 PRO B 192 5 3 HELIX 31 AD4 ALA B 193 LYS B 200 1 8 HELIX 32 AD5 PRO B 209 PHE B 216 5 8 HELIX 33 AD6 LYS B 217 THR B 222 1 6 HELIX 34 AD7 LYS B 245 LEU B 251 1 7 HELIX 35 AD8 SER B 252 ASN B 262 1 11 HELIX 36 AD9 GLY B 264 ALA B 289 1 26 HELIX 37 AE1 SER B 297 ARG B 322 1 26 HELIX 38 AE2 ASP B 325 ASP B 341 1 17 SHEET 1 AA1 5 ILE A 60 TYR A 65 0 SHEET 2 AA1 5 VAL A 26 HIS A 31 1 N VAL A 26 O LYS A 61 SHEET 3 AA1 5 ILE A 88 VAL A 92 1 O ILE A 88 N HIS A 31 SHEET 4 AA1 5 PRO A 238 ASN A 244 -1 O LEU A 240 N THR A 91 SHEET 5 AA1 5 TYR A 137 CYS A 144 -1 N PHE A 143 O PHE A 239 SHEET 1 AA2 6 THR A 185 GLY A 188 0 SHEET 2 AA2 6 LYS A 167 GLY A 170 1 N MSE A 168 O THR A 185 SHEET 3 AA2 6 GLY A 205 VAL A 208 1 O GLY A 205 N ARG A 169 SHEET 4 AA2 6 LYS A 149 THR A 152 -1 N HIS A 151 O MSE A 206 SHEET 5 AA2 6 ALA A 224 VAL A 228 -1 O THR A 226 N ILE A 150 SHEET 6 AA2 6 THR A 292 LEU A 296 1 O HIS A 294 N THR A 227 SHEET 1 AA3 5 ILE B 60 TYR B 65 0 SHEET 2 AA3 5 VAL B 26 HIS B 31 1 N PHE B 30 O GLU B 63 SHEET 3 AA3 5 ILE B 88 VAL B 92 1 O ILE B 88 N HIS B 31 SHEET 4 AA3 5 PRO B 238 ASN B 244 -1 O LEU B 240 N THR B 91 SHEET 5 AA3 5 TYR B 137 CYS B 144 -1 N PHE B 143 O PHE B 239 SHEET 1 AA4 6 THR B 185 GLY B 188 0 SHEET 2 AA4 6 LYS B 167 GLY B 170 1 N MSE B 168 O THR B 185 SHEET 3 AA4 6 GLY B 205 VAL B 208 1 O VAL B 207 N ARG B 169 SHEET 4 AA4 6 LYS B 149 THR B 152 -1 N HIS B 151 O MSE B 206 SHEET 5 AA4 6 ALA B 224 VAL B 228 -1 O THR B 226 N ILE B 150 SHEET 6 AA4 6 THR B 292 LEU B 296 1 O LEU B 296 N THR B 227 LINK C MSE A 24 N GLU A 25 1555 1555 1.33 LINK C PRO A 35 N MSE A 36 1555 1555 1.33 LINK C MSE A 36 N PRO A 37 1555 1555 1.34 LINK C ALA A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N GLN A 69 1555 1555 1.34 LINK C PHE A 110 N MSE A 111 1555 1555 1.33 LINK C MSE A 111 N PRO A 112 1555 1555 1.34 LINK C GLY A 165 N AMSE A 166 1555 1555 1.32 LINK C GLY A 165 N BMSE A 166 1555 1555 1.33 LINK C AMSE A 166 N LYS A 167 1555 1555 1.33 LINK C BMSE A 166 N LYS A 167 1555 1555 1.33 LINK C LYS A 167 N MSE A 168 1555 1555 1.33 LINK C MSE A 168 N ARG A 169 1555 1555 1.33 LINK C LYS A 177 N MSE A 178 1555 1555 1.34 LINK C MSE A 178 N LEU A 179 1555 1555 1.34 LINK C GLY A 188 N MSE A 189 1555 1555 1.34 LINK C MSE A 189 N PRO A 190 1555 1555 1.33 LINK C GLY A 205 N MSE A 206 1555 1555 1.32 LINK C MSE A 206 N VAL A 207 1555 1555 1.31 LINK C ILE A 212 N MSE A 213 1555 1555 1.32 LINK C MSE A 213 N PRO A 214 1555 1555 1.34 LINK C LEU A 242 N MSE A 243 1555 1555 1.34 LINK C MSE A 243 N ASN A 244 1555 1555 1.33 LINK C GLU A 303 N MSE A 304 1555 1555 1.33 LINK C MSE A 304 N LYS A 305 1555 1555 1.33 LINK C ALA A 327 N AMSE A 328 1555 1555 1.33 LINK C ALA A 327 N BMSE A 328 1555 1555 1.33 LINK C AMSE A 328 N LEU A 329 1555 1555 1.34 LINK C BMSE A 328 N LEU A 329 1555 1555 1.33 LINK C SER B 23 N MSE B 24 1555 1555 1.33 LINK C MSE B 24 N GLU B 25 1555 1555 1.33 LINK C PRO B 35 N AMSE B 36 1555 1555 1.33 LINK C PRO B 35 N BMSE B 36 1555 1555 1.32 LINK C AMSE B 36 N PRO B 37 1555 1555 1.34 LINK C BMSE B 36 N PRO B 37 1555 1555 1.34 LINK C ALA B 67 N MSE B 68 1555 1555 1.33 LINK C MSE B 68 N GLN B 69 1555 1555 1.33 LINK C PHE B 110 N MSE B 111 1555 1555 1.34 LINK C MSE B 111 N PRO B 112 1555 1555 1.34 LINK C GLY B 165 N MSE B 166 1555 1555 1.32 LINK C MSE B 166 N LYS B 167 1555 1555 1.34 LINK C LYS B 167 N MSE B 168 1555 1555 1.32 LINK C MSE B 168 N ARG B 169 1555 1555 1.33 LINK C LYS B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N LEU B 179 1555 1555 1.33 LINK C GLY B 188 N MSE B 189 1555 1555 1.33 LINK C MSE B 189 N PRO B 190 1555 1555 1.33 LINK C GLY B 205 N MSE B 206 1555 1555 1.33 LINK C MSE B 206 N VAL B 207 1555 1555 1.33 LINK C ILE B 212 N MSE B 213 1555 1555 1.33 LINK C MSE B 213 N PRO B 214 1555 1555 1.34 LINK C LEU B 242 N MSE B 243 1555 1555 1.33 LINK C MSE B 243 N ASN B 244 1555 1555 1.33 LINK C GLU B 303 N MSE B 304 1555 1555 1.33 LINK C MSE B 304 N LYS B 305 1555 1555 1.34 LINK C ALA B 327 N MSE B 328 1555 1555 1.34 LINK C MSE B 328 N LEU B 329 1555 1555 1.34 SITE 1 AC1 10 TRP A 90 TYR A 95 ARG A 169 PRO A 171 SITE 2 AC1 10 VAL A 191 VAL A 208 GLU A 211 ILE A 212 SITE 3 AC1 10 HOH A 604 HOH A 614 SITE 1 AC2 8 PHE A 44 PRO A 47 TRP A 48 LYS A 51 SITE 2 AC2 8 HOH A 603 HOH A 694 LYS B 167 THR B 185 SITE 1 AC3 2 TRP A 210 ARG A 283 SITE 1 AC4 2 HOH A 772 HOH A 854 SITE 1 AC5 4 LYS A 153 GLU A 154 LYS A 155 MSE A 166 SITE 1 AC6 10 TRP B 90 TYR B 95 ARG B 169 PRO B 171 SITE 2 AC6 10 VAL B 191 VAL B 208 GLU B 211 ILE B 212 SITE 3 AC6 10 HOH B 601 HOH B 665 SITE 1 AC7 5 THR A 185 LYS B 51 LEU B 274 HOH B 646 SITE 2 AC7 5 HOH B 653 SITE 1 AC8 8 ALA B 113 PRO B 147 THR B 227 VAL B 228 SITE 2 AC8 8 GLY B 230 GLY B 233 HOH B 607 HOH B 634 SITE 1 AC9 8 MSE A 189 ALA A 197 VAL A 202 HOH A 574 SITE 2 AC9 8 GLU B 50 HOH B 501 HOH B 652 HOH B 656 SITE 1 AD1 2 TRP B 210 ARG B 283 SITE 1 AD2 3 GLU B 154 LYS B 155 MSE B 166 CRYST1 46.305 82.492 76.577 90.00 98.59 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021596 0.000000 0.003263 0.00000 SCALE2 0.000000 0.012122 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013207 0.00000 HETATM 1 N MSE A 24 8.990 -12.333 -6.781 1.00 46.38 N HETATM 2 CA MSE A 24 9.285 -13.124 -7.973 1.00 47.13 C HETATM 3 C MSE A 24 9.318 -12.275 -9.255 1.00 36.83 C HETATM 4 O MSE A 24 8.539 -11.340 -9.395 1.00 32.93 O HETATM 5 CB MSE A 24 8.248 -14.228 -8.126 1.00 45.78 C HETATM 6 CG MSE A 24 8.489 -15.071 -9.357 1.00 60.64 C HETATM 7 SE MSE A 24 7.385 -16.662 -9.463 1.00121.11 SE HETATM 8 CE MSE A 24 8.556 -17.698 -10.623 1.00 55.20 C HETATM 9 HA MSE A 24 10.151 -13.546 -7.859 1.00 56.56 H HETATM 10 HB2 MSE A 24 8.285 -14.809 -7.350 1.00 54.93 H HETATM 11 HB3 MSE A 24 7.367 -13.828 -8.202 1.00 54.93 H HETATM 12 HG2 MSE A 24 8.307 -14.533 -10.143 1.00 72.77 H HETATM 13 HG3 MSE A 24 9.417 -15.354 -9.363 1.00 72.77 H HETATM 14 HE1 MSE A 24 8.149 -18.562 -10.791 1.00 66.24 H HETATM 15 HE2 MSE A 24 8.675 -17.219 -11.458 1.00 66.24 H HETATM 16 HE3 MSE A 24 9.412 -17.815 -10.183 1.00 66.24 H