HEADER TRANSFERASE 19-FEB-16 5I90 TITLE CRYSTAL STRUCTURE OF PVDN FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PVDN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: PVDN, PA2394; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYOVERDINE PLP AMINOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.J.DRAKE,A.M.GULICK REVDAT 5 06-MAR-24 5I90 1 REMARK REVDAT 4 25-DEC-19 5I90 1 LINK REVDAT 3 16-MAY-18 5I90 1 JRNL REVDAT 2 20-SEP-17 5I90 1 REMARK REVDAT 1 11-MAY-16 5I90 0 JRNL AUTH E.J.DRAKE,A.M.GULICK JRNL TITL 1.2 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE PERIPLASMIC JRNL TITL 2 AMINOTRANSFERASE PVDN FROM PSEUDOMONAS AERUGINOSA. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 72 403 2016 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 27139833 JRNL DOI 10.1107/S2053230X16006257 REMARK 2 REMARK 2 RESOLUTION. 1.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 221908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 11141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.4159 - 3.7863 1.00 7120 405 0.1472 0.1544 REMARK 3 2 3.7863 - 3.0063 1.00 7088 344 0.1546 0.1739 REMARK 3 3 3.0063 - 2.6265 1.00 7057 382 0.1582 0.1784 REMARK 3 4 2.6265 - 2.3865 1.00 7077 362 0.1514 0.1665 REMARK 3 5 2.3865 - 2.2155 1.00 7079 350 0.1378 0.1593 REMARK 3 6 2.2155 - 2.0849 1.00 7041 376 0.1329 0.1514 REMARK 3 7 2.0849 - 1.9805 1.00 7071 352 0.1288 0.1436 REMARK 3 8 1.9805 - 1.8943 1.00 7033 368 0.1267 0.1479 REMARK 3 9 1.8943 - 1.8214 1.00 7015 425 0.1226 0.1380 REMARK 3 10 1.8214 - 1.7586 1.00 7022 350 0.1161 0.1355 REMARK 3 11 1.7586 - 1.7036 1.00 7047 351 0.1141 0.1337 REMARK 3 12 1.7036 - 1.6549 1.00 7035 382 0.1093 0.1381 REMARK 3 13 1.6549 - 1.6113 1.00 7013 368 0.1058 0.1412 REMARK 3 14 1.6113 - 1.5720 1.00 7000 408 0.1058 0.1363 REMARK 3 15 1.5720 - 1.5363 1.00 7023 380 0.1072 0.1445 REMARK 3 16 1.5363 - 1.5036 1.00 6951 411 0.1091 0.1321 REMARK 3 17 1.5036 - 1.4735 1.00 7051 393 0.1138 0.1555 REMARK 3 18 1.4735 - 1.4457 1.00 7040 365 0.1180 0.1433 REMARK 3 19 1.4457 - 1.4199 1.00 7005 351 0.1230 0.1473 REMARK 3 20 1.4199 - 1.3958 1.00 6991 379 0.1257 0.1573 REMARK 3 21 1.3958 - 1.3733 1.00 7019 392 0.1304 0.1552 REMARK 3 22 1.3733 - 1.3522 1.00 7045 365 0.1351 0.1614 REMARK 3 23 1.3522 - 1.3323 1.00 6956 391 0.1399 0.1695 REMARK 3 24 1.3323 - 1.3135 1.00 7037 348 0.1460 0.1645 REMARK 3 25 1.3135 - 1.2958 1.00 7100 339 0.1575 0.1834 REMARK 3 26 1.2958 - 1.2790 1.00 6999 378 0.1670 0.2126 REMARK 3 27 1.2790 - 1.2630 1.00 7017 337 0.1715 0.1855 REMARK 3 28 1.2630 - 1.2478 1.00 7033 345 0.1870 0.1887 REMARK 3 29 1.2478 - 1.2332 1.00 6966 390 0.1945 0.1962 REMARK 3 30 1.2332 - 1.2194 0.97 6836 354 0.2088 0.2401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6651 REMARK 3 ANGLE : 0.875 9041 REMARK 3 CHIRALITY : 0.079 964 REMARK 3 PLANARITY : 0.005 1195 REMARK 3 DIHEDRAL : 16.139 2479 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI(111) AND SI(220) DOUBLE REMARK 200 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 221938 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.219 REMARK 200 RESOLUTION RANGE LOW (A) : 29.407 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-14% PEG 8000, 100-200 MM GLYCINE, REMARK 280 50 MM MES (PH 6.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.49800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ASP A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 THR A 6 REMARK 465 PHE A 7 REMARK 465 LEU A 8 REMARK 465 LYS A 9 REMARK 465 GLN A 10 REMARK 465 ALA A 11 REMARK 465 GLY A 12 REMARK 465 ILE A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 GLY A 17 REMARK 465 LEU A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 LEU A 27 REMARK 465 ARG A 28 REMARK 465 ALA A 29 REMARK 465 GLU A 30 REMARK 465 GLY A 31 REMARK 465 VAL A 32 REMARK 465 PRO A 33 REMARK 465 SER A 34 REMARK 465 ASP A 35 REMARK 465 ALA A 36 REMARK 465 GLY A 37 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASP B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 THR B 6 REMARK 465 PHE B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 GLN B 10 REMARK 465 ALA B 11 REMARK 465 GLY B 12 REMARK 465 ILE B 13 REMARK 465 LEU B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 GLY B 17 REMARK 465 LEU B 18 REMARK 465 PRO B 19 REMARK 465 LEU B 20 REMARK 465 LEU B 21 REMARK 465 SER B 22 REMARK 465 ALA B 23 REMARK 465 ALA B 24 REMARK 465 GLN B 25 REMARK 465 SER B 26 REMARK 465 LEU B 27 REMARK 465 ARG B 28 REMARK 465 ALA B 29 REMARK 465 GLU B 30 REMARK 465 GLY B 31 REMARK 465 VAL B 32 REMARK 465 PRO B 33 REMARK 465 SER B 34 REMARK 465 ASP B 35 REMARK 465 ALA B 36 REMARK 465 GLY B 37 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 281 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 854 O HOH B 888 1.95 REMARK 500 O HOH A 612 O HOH A 894 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 76 CZ ARG A 76 NH2 -0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 82 73.49 -158.94 REMARK 500 THR A 119 -169.62 -121.32 REMARK 500 SER A 121 171.80 175.71 REMARK 500 SER A 207 -30.31 -137.84 REMARK 500 LYS A 264 -108.07 -117.50 REMARK 500 SER A 365 -120.38 -145.63 REMARK 500 ARG A 396 -136.12 -116.98 REMARK 500 ASN B 82 70.75 -158.51 REMARK 500 THR B 119 -169.20 -122.08 REMARK 500 SER B 121 171.67 176.36 REMARK 500 SER B 207 -30.07 -139.42 REMARK 500 LYS B 264 -106.92 -117.08 REMARK 500 SER B 365 -121.07 -144.49 REMARK 500 ARG B 396 -131.86 -115.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 903 DISTANCE = 6.19 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 503 DBREF 5I90 A 1 427 UNP G3XCY5 G3XCY5_PSEAE 1 427 DBREF 5I90 B 1 427 UNP G3XCY5 G3XCY5_PSEAE 1 427 SEQRES 1 A 427 MET ASN ASP ARG ARG THR PHE LEU LYS GLN ALA GLY ILE SEQRES 2 A 427 LEU ALA ALA GLY LEU PRO LEU LEU SER ALA ALA GLN SER SEQRES 3 A 427 LEU ARG ALA GLU GLY VAL PRO SER ASP ALA GLY ASN LYS SEQRES 4 A 427 TRP LYS ALA LEU ARG GLN GLN PHE ASP LEU ASP PRO GLN SEQRES 5 A 427 TYR LEU HIS PHE ALA ASN PHE LEU LEU THR SER HIS PRO SEQRES 6 A 427 ARG PRO VAL ARG GLU ALA ILE GLU ARG LEU ARG VAL ARG SEQRES 7 A 427 PHE ASP ARG ASN PRO GLY GLU ALA VAL ASP TRP HIS ARG SEQRES 8 A 427 GLU GLU ILE TRP LYS TYR GLU ASP GLU ALA ARG ALA TRP SEQRES 9 A 427 ALA GLY ARG TYR PHE ALA VAL GLN PRO GLY GLN VAL ALA SEQRES 10 A 427 LEU THR GLY SER THR THR ASP GLY LEU ALA ALA ILE TYR SEQRES 11 A 427 GLY GLY LEU LEU VAL GLN PRO GLY LYS GLU ILE LEU THR SEQRES 12 A 427 SER SER HIS GLU HIS TYR SER THR TYR THR THR LEU GLU SEQRES 13 A 427 TYR ARG HIS LYS ARG MET GLY THR GLN VAL ARG GLU PHE SEQRES 14 A 427 PRO LEU PHE LYS ASP PRO HIS ARG VAL SER ALA ASP GLU SEQRES 15 A 427 ILE LEU SER SER ILE ALA ALA GLN ILE ARG PRO GLN THR SEQRES 16 A 427 ARG VAL LEU GLY MET THR TRP VAL GLN SER GLY SER GLY SEQRES 17 A 427 VAL LYS LEU PRO ILE ARG GLU ILE GLY LYS LEU VAL ARG SEQRES 18 A 427 GLU LEU ASN GLN LYS ARG ASP GLU GLN ASP ARG ILE ILE SEQRES 19 A 427 TYR VAL VAL ASP GLY VAL HIS GLY PHE GLY VAL GLU ASP SEQRES 20 A 427 VAL SER PHE ALA ASP PHE ASP CYS ASP TYR PHE ILE ALA SEQRES 21 A 427 GLY THR HIS LYS TRP LEU PHE GLY PRO ARG GLY THR GLY SEQRES 22 A 427 VAL ILE ILE ALA ARG SER GLU GLN LEU GLN GLU HIS LEU SEQRES 23 A 427 VAL PRO SER ILE PRO THR PHE SER ARG ALA ASP ASN PHE SEQRES 24 A 427 GLY THR LEU MET THR PRO GLY GLY TYR HIS ALA PHE GLU SEQRES 25 A 427 HIS ARG LEU ALA LEU GLY THR ALA PHE GLU LEU HIS LEU SEQRES 26 A 427 GLN LEU GLY LYS ALA GLU VAL GLN ALA ARG ILE HIS GLN SEQRES 27 A 427 LEU ASN ALA TYR LEU LYS GLN ARG LEU GLY GLU HIS PRO SEQRES 28 A 427 LYS VAL ARG LEU VAL THR PRO THR SER PRO GLU LEU SER SEQRES 29 A 427 SER GLY PHE THR PHE PHE ARG VAL GLU GLY ARG ASP CYS SEQRES 30 A 427 GLU ALA VAL ALA LYS HIS LEU MET ALA HIS ARG VAL ILE SEQRES 31 A 427 SER ASP ALA VAL ASP ARG ASP VAL GLY PRO VAL VAL ARG SEQRES 32 A 427 LEU ALA PRO SER LEU LEU ASN ASP GLU ALA GLU ILE ASP SEQRES 33 A 427 ARG VAL LEU GLU ILE LEU ALA PRO GLN LEU ALA SEQRES 1 B 427 MET ASN ASP ARG ARG THR PHE LEU LYS GLN ALA GLY ILE SEQRES 2 B 427 LEU ALA ALA GLY LEU PRO LEU LEU SER ALA ALA GLN SER SEQRES 3 B 427 LEU ARG ALA GLU GLY VAL PRO SER ASP ALA GLY ASN LYS SEQRES 4 B 427 TRP LYS ALA LEU ARG GLN GLN PHE ASP LEU ASP PRO GLN SEQRES 5 B 427 TYR LEU HIS PHE ALA ASN PHE LEU LEU THR SER HIS PRO SEQRES 6 B 427 ARG PRO VAL ARG GLU ALA ILE GLU ARG LEU ARG VAL ARG SEQRES 7 B 427 PHE ASP ARG ASN PRO GLY GLU ALA VAL ASP TRP HIS ARG SEQRES 8 B 427 GLU GLU ILE TRP LYS TYR GLU ASP GLU ALA ARG ALA TRP SEQRES 9 B 427 ALA GLY ARG TYR PHE ALA VAL GLN PRO GLY GLN VAL ALA SEQRES 10 B 427 LEU THR GLY SER THR THR ASP GLY LEU ALA ALA ILE TYR SEQRES 11 B 427 GLY GLY LEU LEU VAL GLN PRO GLY LYS GLU ILE LEU THR SEQRES 12 B 427 SER SER HIS GLU HIS TYR SER THR TYR THR THR LEU GLU SEQRES 13 B 427 TYR ARG HIS LYS ARG MET GLY THR GLN VAL ARG GLU PHE SEQRES 14 B 427 PRO LEU PHE LYS ASP PRO HIS ARG VAL SER ALA ASP GLU SEQRES 15 B 427 ILE LEU SER SER ILE ALA ALA GLN ILE ARG PRO GLN THR SEQRES 16 B 427 ARG VAL LEU GLY MET THR TRP VAL GLN SER GLY SER GLY SEQRES 17 B 427 VAL LYS LEU PRO ILE ARG GLU ILE GLY LYS LEU VAL ARG SEQRES 18 B 427 GLU LEU ASN GLN LYS ARG ASP GLU GLN ASP ARG ILE ILE SEQRES 19 B 427 TYR VAL VAL ASP GLY VAL HIS GLY PHE GLY VAL GLU ASP SEQRES 20 B 427 VAL SER PHE ALA ASP PHE ASP CYS ASP TYR PHE ILE ALA SEQRES 21 B 427 GLY THR HIS LYS TRP LEU PHE GLY PRO ARG GLY THR GLY SEQRES 22 B 427 VAL ILE ILE ALA ARG SER GLU GLN LEU GLN GLU HIS LEU SEQRES 23 B 427 VAL PRO SER ILE PRO THR PHE SER ARG ALA ASP ASN PHE SEQRES 24 B 427 GLY THR LEU MET THR PRO GLY GLY TYR HIS ALA PHE GLU SEQRES 25 B 427 HIS ARG LEU ALA LEU GLY THR ALA PHE GLU LEU HIS LEU SEQRES 26 B 427 GLN LEU GLY LYS ALA GLU VAL GLN ALA ARG ILE HIS GLN SEQRES 27 B 427 LEU ASN ALA TYR LEU LYS GLN ARG LEU GLY GLU HIS PRO SEQRES 28 B 427 LYS VAL ARG LEU VAL THR PRO THR SER PRO GLU LEU SER SEQRES 29 B 427 SER GLY PHE THR PHE PHE ARG VAL GLU GLY ARG ASP CYS SEQRES 30 B 427 GLU ALA VAL ALA LYS HIS LEU MET ALA HIS ARG VAL ILE SEQRES 31 B 427 SER ASP ALA VAL ASP ARG ASP VAL GLY PRO VAL VAL ARG SEQRES 32 B 427 LEU ALA PRO SER LEU LEU ASN ASP GLU ALA GLU ILE ASP SEQRES 33 B 427 ARG VAL LEU GLU ILE LEU ALA PRO GLN LEU ALA HET PLP A 501 16 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET PLP B 501 16 HET EDO B 502 4 HET EDO B 503 4 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 4 EDO 5(C2 H6 O2) FORMUL 10 HOH *662(H2 O) HELIX 1 AA1 ASN A 38 GLN A 46 1 9 HELIX 2 AA2 PRO A 65 ASN A 82 1 18 HELIX 3 AA3 ASN A 82 VAL A 87 1 6 HELIX 4 AA4 GLU A 92 ALA A 110 1 19 HELIX 5 AA5 GLN A 112 GLY A 114 5 3 HELIX 6 AA6 SER A 121 LEU A 133 1 13 HELIX 7 AA7 HIS A 148 GLY A 163 1 16 HELIX 8 AA8 SER A 179 ILE A 191 1 13 HELIX 9 AA9 PRO A 212 GLN A 225 1 14 HELIX 10 AB1 LYS A 226 ARG A 227 5 2 HELIX 11 AB2 ASP A 228 ARG A 232 5 5 HELIX 12 AB3 VAL A 240 PHE A 243 5 4 HELIX 13 AB4 SER A 249 ASP A 254 5 6 HELIX 14 AB5 ASN A 298 MET A 303 1 6 HELIX 15 AB6 ALA A 310 LEU A 315 1 6 HELIX 16 AB7 LEU A 317 GLY A 328 1 12 HELIX 17 AB8 GLY A 328 GLY A 348 1 21 HELIX 18 AB9 SER A 360 SER A 364 5 5 HELIX 19 AC1 ASP A 376 HIS A 387 1 12 HELIX 20 AC2 ASP A 411 ALA A 427 1 17 HELIX 21 AC3 LYS B 39 GLN B 45 1 7 HELIX 22 AC4 PRO B 65 ASN B 82 1 18 HELIX 23 AC5 ASN B 82 VAL B 87 1 6 HELIX 24 AC6 GLU B 92 ALA B 110 1 19 HELIX 25 AC7 GLN B 112 GLY B 114 5 3 HELIX 26 AC8 SER B 121 LEU B 133 1 13 HELIX 27 AC9 HIS B 148 GLY B 163 1 16 HELIX 28 AD1 ASP B 174 VAL B 178 5 5 HELIX 29 AD2 SER B 179 ILE B 191 1 13 HELIX 30 AD3 PRO B 212 GLN B 225 1 14 HELIX 31 AD4 LYS B 226 ARG B 227 5 2 HELIX 32 AD5 ASP B 228 ARG B 232 5 5 HELIX 33 AD6 VAL B 240 PHE B 243 5 4 HELIX 34 AD7 SER B 249 PHE B 253 5 5 HELIX 35 AD8 ASN B 298 MET B 303 1 6 HELIX 36 AD9 ALA B 310 LEU B 315 1 6 HELIX 37 AE1 ALA B 316 GLY B 328 1 13 HELIX 38 AE2 GLY B 328 GLY B 348 1 21 HELIX 39 AE3 SER B 360 SER B 364 5 5 HELIX 40 AE4 ASP B 376 HIS B 387 1 12 HELIX 41 AE5 ASP B 411 ALA B 427 1 17 SHEET 1 AA1 2 LEU A 54 HIS A 55 0 SHEET 2 AA1 2 VAL A 389 ILE A 390 1 O ILE A 390 N LEU A 54 SHEET 1 AA2 7 VAL A 116 THR A 119 0 SHEET 2 AA2 7 GLY A 273 ALA A 277 -1 O ILE A 275 N ALA A 117 SHEET 3 AA2 7 TYR A 257 GLY A 261 -1 N PHE A 258 O ILE A 276 SHEET 4 AA2 7 ILE A 234 ASP A 238 1 N VAL A 237 O ILE A 259 SHEET 5 AA2 7 THR A 195 THR A 201 1 N LEU A 198 O VAL A 236 SHEET 6 AA2 7 GLU A 140 SER A 144 1 N LEU A 142 O VAL A 197 SHEET 7 AA2 7 GLN A 165 PHE A 169 1 O ARG A 167 N ILE A 141 SHEET 1 AA3 4 VAL A 353 LEU A 355 0 SHEET 2 AA3 4 THR A 368 VAL A 372 -1 O ARG A 371 N ARG A 354 SHEET 3 AA3 4 GLY A 399 LEU A 404 -1 O VAL A 402 N PHE A 370 SHEET 4 AA3 4 ASP A 392 ARG A 396 -1 N ASP A 392 O ARG A 403 SHEET 1 AA4 2 LEU B 54 HIS B 55 0 SHEET 2 AA4 2 VAL B 389 ILE B 390 1 O ILE B 390 N LEU B 54 SHEET 1 AA5 7 VAL B 116 THR B 119 0 SHEET 2 AA5 7 GLY B 273 ALA B 277 -1 O ILE B 275 N ALA B 117 SHEET 3 AA5 7 TYR B 257 GLY B 261 -1 N PHE B 258 O ILE B 276 SHEET 4 AA5 7 ILE B 234 ASP B 238 1 N VAL B 237 O ILE B 259 SHEET 5 AA5 7 THR B 195 THR B 201 1 N LEU B 198 O VAL B 236 SHEET 6 AA5 7 GLU B 140 SER B 144 1 N LEU B 142 O VAL B 197 SHEET 7 AA5 7 GLN B 165 PHE B 169 1 O GLN B 165 N ILE B 141 SHEET 1 AA6 4 VAL B 353 LEU B 355 0 SHEET 2 AA6 4 THR B 368 VAL B 372 -1 O ARG B 371 N ARG B 354 SHEET 3 AA6 4 GLY B 399 LEU B 404 -1 O VAL B 402 N PHE B 370 SHEET 4 AA6 4 ASP B 392 ARG B 396 -1 N ASP B 392 O ARG B 403 SITE 1 AC1 13 SER A 121 THR A 122 THR A 123 HIS A 148 SITE 2 AC1 13 SER A 205 ASP A 238 VAL A 240 HIS A 241 SITE 3 AC1 13 HIS A 263 LYS A 264 HOH A 620 GLY B 307 SITE 4 AC1 13 TYR B 308 SITE 1 AC2 5 SER A 145 TYR A 152 GLU A 168 HOH A 802 SITE 2 AC2 5 HOH A 821 SITE 1 AC3 6 ARG A 221 ASN A 224 EDO A 504 HOH A 665 SITE 2 AC3 6 HOH A 723 HOH A 793 SITE 1 AC4 6 ILE A 233 ASP A 256 EDO A 503 HOH A 785 SITE 2 AC4 6 HOH A 807 HOH A 816 SITE 1 AC5 13 GLY A 307 TYR A 308 SER B 121 THR B 122 SITE 2 AC5 13 THR B 123 HIS B 148 SER B 205 ASP B 238 SITE 3 AC5 13 VAL B 240 HIS B 241 HIS B 263 LYS B 264 SITE 4 AC5 13 HOH B 633 SITE 1 AC6 5 HOH A 633 HOH A 953 ALA B 103 TRP B 104 SITE 2 AC6 5 ARG B 107 SITE 1 AC7 5 SER B 145 TYR B 152 GLU B 168 HOH B 781 SITE 2 AC7 5 HOH B 831 CRYST1 62.521 98.996 63.046 90.00 102.32 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015995 0.000000 0.003492 0.00000 SCALE2 0.000000 0.010101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016235 0.00000