HEADER TRANSFERASE 21-FEB-16 5IAO TITLE STRUCTURE AND MAPPING OF SPONTANEOUS MUTATIONAL SITES OF PYRR FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL PROTEIN PYRR; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 EC: 2.4.2.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25177 / SOURCE 3 H37RA); SOURCE 4 ORGANISM_TAXID: 419947; SOURCE 5 STRAIN: ATCC 25177 / H37RA; SOURCE 6 GENE: PYRR, MRA_1388; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS URACIL PHOSPHORIBOSYLTRANSFERASE (UPRTASE), TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.SIVARAMAN,P.GHODE,S.RAMACHANDRAN REVDAT 3 08-NOV-23 5IAO 1 JRNL REMARK REVDAT 2 06-APR-16 5IAO 1 JRNL REVDAT 1 16-MAR-16 5IAO 0 JRNL AUTH P.GHODE,S.RAMACHANDRAN,P.BIFANI,J.SIVARAMAN JRNL TITL STRUCTURE AND MAPPING OF SPONTANEOUS MUTATIONAL SITES OF JRNL TITL 2 PYRR FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 471 409 2016 JRNL REFN ESSN 1090-2104 JRNL PMID 26902118 JRNL DOI 10.1016/J.BBRC.2016.02.071 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 49742 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2488 - 6.2562 0.99 3481 151 0.1715 0.1820 REMARK 3 2 6.2562 - 4.9683 1.00 3482 147 0.1880 0.2155 REMARK 3 3 4.9683 - 4.3410 1.00 3439 141 0.1445 0.1620 REMARK 3 4 4.3410 - 3.9444 1.00 3440 145 0.1626 0.2099 REMARK 3 5 3.9444 - 3.6618 1.00 3395 144 0.1718 0.2080 REMARK 3 6 3.6618 - 3.4460 1.00 3460 148 0.1919 0.2736 REMARK 3 7 3.4460 - 3.2735 0.99 3404 141 0.2069 0.2590 REMARK 3 8 3.2735 - 3.1311 0.99 3393 146 0.2207 0.2594 REMARK 3 9 3.1311 - 3.0106 0.99 3397 139 0.2293 0.3144 REMARK 3 10 3.0106 - 2.9067 0.99 3393 145 0.2322 0.3197 REMARK 3 11 2.9067 - 2.8159 0.99 3377 141 0.2497 0.2704 REMARK 3 12 2.8159 - 2.7354 0.99 3371 144 0.2481 0.3268 REMARK 3 13 2.7354 - 2.6634 0.99 3395 137 0.2506 0.3014 REMARK 3 14 2.6634 - 2.5984 0.97 3309 137 0.2554 0.2720 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7896 REMARK 3 ANGLE : 0.860 10713 REMARK 3 CHIRALITY : 0.033 1278 REMARK 3 PLANARITY : 0.004 1413 REMARK 3 DIHEDRAL : 10.451 2964 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IAO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218417. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 188352 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.598 REMARK 200 RESOLUTION RANGE LOW (A) : 42.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.13800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1W30 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE PH 6.5, 1.0M SODIUM REMARK 280 ACETATE TRIHYDRATE, 10%(V/V) 1,2-BUTANEDIOL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.41800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.88500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.41800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 63.88500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 ASP A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 ILE A 9 REMARK 465 GLY A 10 REMARK 465 ARG A 11 REMARK 465 ASP A 91 REMARK 465 LEU A 92 REMARK 465 MET A 93 REMARK 465 ILE A 94 REMARK 465 LYS A 95 REMARK 465 PRO A 96 REMARK 465 PRO A 97 REMARK 465 ARG A 98 REMARK 465 PRO A 99 REMARK 465 LEU A 100 REMARK 465 ALA A 101 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 GLY B 5 REMARK 465 ASP B 6 REMARK 465 ALA B 7 REMARK 465 ALA B 8 REMARK 465 ILE B 9 REMARK 465 GLY B 10 REMARK 465 ARG B 11 REMARK 465 ASP B 91 REMARK 465 LEU B 92 REMARK 465 MET B 93 REMARK 465 ILE B 94 REMARK 465 LYS B 95 REMARK 465 PRO B 96 REMARK 465 PRO B 97 REMARK 465 ARG B 98 REMARK 465 PRO B 99 REMARK 465 LEU B 100 REMARK 465 ALA B 101 REMARK 465 HIS B 194 REMARK 465 HIS B 195 REMARK 465 HIS B 196 REMARK 465 HIS B 197 REMARK 465 HIS B 198 REMARK 465 HIS B 199 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 ALA C 3 REMARK 465 ALA C 4 REMARK 465 GLY C 5 REMARK 465 ASP C 6 REMARK 465 ALA C 7 REMARK 465 ALA C 8 REMARK 465 ILE C 9 REMARK 465 GLY C 10 REMARK 465 ARG C 11 REMARK 465 ASP C 91 REMARK 465 LEU C 92 REMARK 465 MET C 93 REMARK 465 ILE C 94 REMARK 465 LYS C 95 REMARK 465 PRO C 96 REMARK 465 PRO C 97 REMARK 465 ARG C 98 REMARK 465 PRO C 99 REMARK 465 LEU C 100 REMARK 465 ALA C 101 REMARK 465 HIS C 194 REMARK 465 HIS C 195 REMARK 465 HIS C 196 REMARK 465 HIS C 197 REMARK 465 HIS C 198 REMARK 465 HIS C 199 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 ALA D 3 REMARK 465 ALA D 4 REMARK 465 GLY D 5 REMARK 465 ASP D 6 REMARK 465 ALA D 7 REMARK 465 ALA D 8 REMARK 465 ILE D 9 REMARK 465 GLY D 10 REMARK 465 ARG D 11 REMARK 465 ASP D 91 REMARK 465 LEU D 92 REMARK 465 MET D 93 REMARK 465 ILE D 94 REMARK 465 LYS D 95 REMARK 465 PRO D 96 REMARK 465 PRO D 97 REMARK 465 ARG D 98 REMARK 465 PRO D 99 REMARK 465 LEU D 100 REMARK 465 ALA D 101 REMARK 465 HIS D 194 REMARK 465 HIS D 195 REMARK 465 HIS D 196 REMARK 465 HIS D 197 REMARK 465 HIS D 198 REMARK 465 HIS D 199 REMARK 465 MET E 1 REMARK 465 GLY E 2 REMARK 465 ALA E 3 REMARK 465 ALA E 4 REMARK 465 GLY E 5 REMARK 465 ASP E 6 REMARK 465 ALA E 7 REMARK 465 ALA E 8 REMARK 465 ILE E 9 REMARK 465 GLY E 10 REMARK 465 ARG E 11 REMARK 465 ASP E 91 REMARK 465 LEU E 92 REMARK 465 MET E 93 REMARK 465 ILE E 94 REMARK 465 LYS E 95 REMARK 465 PRO E 96 REMARK 465 PRO E 97 REMARK 465 ARG E 98 REMARK 465 PRO E 99 REMARK 465 LEU E 100 REMARK 465 ALA E 101 REMARK 465 HIS E 194 REMARK 465 HIS E 195 REMARK 465 HIS E 196 REMARK 465 HIS E 197 REMARK 465 HIS E 198 REMARK 465 HIS E 199 REMARK 465 MET F 1 REMARK 465 GLY F 2 REMARK 465 ALA F 3 REMARK 465 ALA F 4 REMARK 465 GLY F 5 REMARK 465 ASP F 6 REMARK 465 ALA F 7 REMARK 465 ALA F 8 REMARK 465 ILE F 9 REMARK 465 GLY F 10 REMARK 465 ARG F 11 REMARK 465 ASP F 91 REMARK 465 LEU F 92 REMARK 465 MET F 93 REMARK 465 ILE F 94 REMARK 465 LYS F 95 REMARK 465 PRO F 96 REMARK 465 PRO F 97 REMARK 465 ARG F 98 REMARK 465 PRO F 99 REMARK 465 LEU F 100 REMARK 465 ALA F 101 REMARK 465 HIS F 194 REMARK 465 HIS F 195 REMARK 465 HIS F 196 REMARK 465 HIS F 197 REMARK 465 HIS F 198 REMARK 465 HIS F 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 90 O REMARK 470 ASP D 90 O REMARK 470 ASP F 90 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG F 58 F5 URF F 301 2.12 REMARK 500 O HOH C 473 O HOH C 479 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 123 -100.16 -123.91 REMARK 500 PRO A 158 49.80 -75.02 REMARK 500 ARG B 89 -118.22 -106.06 REMARK 500 TYR B 123 -101.30 -123.63 REMARK 500 PRO B 158 48.95 -75.01 REMARK 500 PRO C 42 29.05 -60.50 REMARK 500 VAL C 43 80.68 38.68 REMARK 500 TYR C 123 -101.70 -123.48 REMARK 500 PRO C 158 49.96 -74.02 REMARK 500 VAL D 43 -88.18 -41.27 REMARK 500 TYR D 123 -101.99 -122.16 REMARK 500 PRO D 158 49.10 -75.84 REMARK 500 TYR E 123 -101.91 -121.91 REMARK 500 PRO E 158 48.56 -75.14 REMARK 500 PRO F 42 62.33 -58.18 REMARK 500 VAL F 43 -129.22 28.83 REMARK 500 TYR F 123 -101.74 -122.69 REMARK 500 PRO F 158 48.41 -76.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 456 DISTANCE = 7.28 ANGSTROMS REMARK 525 HOH A 457 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH F 460 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH F 461 DISTANCE = 8.17 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue URF A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue URF C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue URF F 301 DBREF 5IAO A 1 193 UNP A5U281 PYRR_MYCTA 1 193 DBREF 5IAO B 1 193 UNP A5U281 PYRR_MYCTA 1 193 DBREF 5IAO C 1 193 UNP A5U281 PYRR_MYCTA 1 193 DBREF 5IAO D 1 193 UNP A5U281 PYRR_MYCTA 1 193 DBREF 5IAO E 1 193 UNP A5U281 PYRR_MYCTA 1 193 DBREF 5IAO F 1 193 UNP A5U281 PYRR_MYCTA 1 193 SEQADV 5IAO HIS A 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS A 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS A 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS A 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS A 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS A 199 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS B 199 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS C 199 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS D 199 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS E 199 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 194 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 195 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 196 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 197 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 198 UNP A5U281 EXPRESSION TAG SEQADV 5IAO HIS F 199 UNP A5U281 EXPRESSION TAG SEQRES 1 A 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 A 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 A 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 A 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 A 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 A 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 A 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 A 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 A 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 A 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 A 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 A 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 A 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 A 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 A 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 A 199 HIS HIS HIS HIS SEQRES 1 B 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 B 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 B 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 B 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 B 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 B 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 B 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 B 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 B 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 B 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 B 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 B 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 B 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 B 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 B 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 B 199 HIS HIS HIS HIS SEQRES 1 C 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 C 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 C 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 C 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 C 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 C 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 C 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 C 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 C 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 C 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 C 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 C 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 C 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 C 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 C 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 C 199 HIS HIS HIS HIS SEQRES 1 D 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 D 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 D 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 D 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 D 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 D 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 D 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 D 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 D 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 D 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 D 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 D 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 D 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 D 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 D 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 D 199 HIS HIS HIS HIS SEQRES 1 E 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 E 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 E 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 E 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 E 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 E 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 E 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 E 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 E 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 E 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 E 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 E 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 E 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 E 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 E 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 E 199 HIS HIS HIS HIS SEQRES 1 F 199 MET GLY ALA ALA GLY ASP ALA ALA ILE GLY ARG GLU SER SEQRES 2 F 199 ARG GLU LEU MET SER ALA ALA ASP VAL GLY ARG THR ILE SEQRES 3 F 199 SER ARG ILE ALA HIS GLN ILE ILE GLU LYS THR ALA LEU SEQRES 4 F 199 ASP ASP PRO VAL GLY PRO ASP ALA PRO ARG VAL VAL LEU SEQRES 5 F 199 LEU GLY ILE PRO THR ARG GLY VAL THR LEU ALA ASN ARG SEQRES 6 F 199 LEU ALA GLY ASN ILE THR GLU TYR SER GLY ILE HIS VAL SEQRES 7 F 199 GLY HIS GLY ALA LEU ASP ILE THR LEU TYR ARG ASP ASP SEQRES 8 F 199 LEU MET ILE LYS PRO PRO ARG PRO LEU ALA SER THR SER SEQRES 9 F 199 ILE PRO ALA GLY GLY ILE ASP ASP ALA LEU VAL ILE LEU SEQRES 10 F 199 VAL ASP ASP VAL LEU TYR SER GLY ARG SER VAL ARG SER SEQRES 11 F 199 ALA LEU ASP ALA LEU ARG ASP VAL GLY ARG PRO ARG ALA SEQRES 12 F 199 VAL GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU SEQRES 13 F 199 LEU PRO LEU ARG ALA ASP TYR VAL GLY LYS ASN VAL PRO SEQRES 14 F 199 THR SER ARG SER GLU SER VAL HIS VAL ARG LEU ARG GLU SEQRES 15 F 199 HIS ASP GLY ARG ASP GLY VAL VAL ILE SER ARG HIS HIS SEQRES 16 F 199 HIS HIS HIS HIS HET URF A 301 12 HET URF C 301 12 HET URF F 301 12 HETNAM URF 5-FLUOROURACIL FORMUL 7 URF 3(C4 H3 F N2 O2) FORMUL 10 HOH *341(H2 O) HELIX 1 AA1 SER A 18 ALA A 38 1 21 HELIX 2 AA2 THR A 57 GLY A 75 1 19 HELIX 3 AA3 ILE A 85 ARG A 89 5 5 HELIX 4 AA4 GLY A 125 ARG A 136 1 12 HELIX 5 AA5 LEU A 180 GLY A 185 1 6 HELIX 6 AA6 SER B 18 ALA B 38 1 21 HELIX 7 AA7 THR B 57 GLY B 75 1 19 HELIX 8 AA8 ILE B 85 ARG B 89 5 5 HELIX 9 AA9 GLY B 125 ASP B 137 1 13 HELIX 10 AB1 LEU B 180 GLY B 185 1 6 HELIX 11 AB2 SER C 18 ALA C 38 1 21 HELIX 12 AB3 THR C 57 GLY C 75 1 19 HELIX 13 AB4 ILE C 85 ARG C 89 5 5 HELIX 14 AB5 GLY C 125 ARG C 136 1 12 HELIX 15 AB6 LEU C 180 GLY C 185 1 6 HELIX 16 AB7 SER D 18 ALA D 38 1 21 HELIX 17 AB8 THR D 57 GLY D 75 1 19 HELIX 18 AB9 ILE D 85 ARG D 89 5 5 HELIX 19 AC1 GLY D 125 ASP D 137 1 13 HELIX 20 AC2 LEU D 180 GLY D 185 1 6 HELIX 21 AC3 SER E 18 ALA E 38 1 21 HELIX 22 AC4 THR E 57 GLY E 75 1 19 HELIX 23 AC5 ILE E 85 ARG E 89 5 5 HELIX 24 AC6 GLY E 125 ASP E 137 1 13 HELIX 25 AC7 LEU E 180 GLY E 185 1 6 HELIX 26 AC8 SER F 18 ALA F 38 1 21 HELIX 27 AC9 THR F 57 GLY F 75 1 19 HELIX 28 AD1 ILE F 85 ARG F 89 5 5 HELIX 29 AD2 GLY F 125 ARG F 136 1 12 HELIX 30 AD3 LEU F 180 GLY F 185 1 6 SHEET 1 AA1 3 SER A 13 MET A 17 0 SHEET 2 AA1 3 GLY A 188 SER A 192 -1 O ILE A 191 N ARG A 14 SHEET 3 AA1 3 SER A 175 ARG A 179 -1 N HIS A 177 O VAL A 190 SHEET 1 AA2 5 GLY A 79 ALA A 82 0 SHEET 2 AA2 5 VAL A 50 GLY A 54 1 N LEU A 52 O GLY A 79 SHEET 3 AA2 5 LEU A 114 LEU A 122 1 O ILE A 116 N VAL A 51 SHEET 4 AA2 5 ALA A 143 ASP A 151 1 O GLN A 145 N VAL A 115 SHEET 5 AA2 5 TYR A 163 ASN A 167 1 O LYS A 166 N ASP A 151 SHEET 1 AA3 3 SER B 13 MET B 17 0 SHEET 2 AA3 3 GLY B 188 SER B 192 -1 O VAL B 189 N LEU B 16 SHEET 3 AA3 3 SER B 175 ARG B 179 -1 N HIS B 177 O VAL B 190 SHEET 1 AA4 5 GLY B 79 ALA B 82 0 SHEET 2 AA4 5 VAL B 50 GLY B 54 1 N LEU B 52 O GLY B 81 SHEET 3 AA4 5 LEU B 114 LEU B 122 1 O ILE B 116 N VAL B 51 SHEET 4 AA4 5 ALA B 143 ASP B 151 1 O GLN B 145 N VAL B 115 SHEET 5 AA4 5 TYR B 163 ASN B 167 1 O TYR B 163 N VAL B 148 SHEET 1 AA5 3 SER C 13 MET C 17 0 SHEET 2 AA5 3 GLY C 188 SER C 192 -1 O VAL C 189 N LEU C 16 SHEET 3 AA5 3 SER C 175 ARG C 179 -1 N HIS C 177 O VAL C 190 SHEET 1 AA6 5 GLY C 79 ALA C 82 0 SHEET 2 AA6 5 VAL C 50 GLY C 54 1 N LEU C 52 O GLY C 79 SHEET 3 AA6 5 LEU C 114 LEU C 122 1 O ILE C 116 N VAL C 51 SHEET 4 AA6 5 ALA C 143 ASP C 151 1 O VAL C 150 N LEU C 122 SHEET 5 AA6 5 TYR C 163 ASN C 167 1 O LYS C 166 N ASP C 151 SHEET 1 AA7 3 SER D 13 MET D 17 0 SHEET 2 AA7 3 GLY D 188 SER D 192 -1 O ILE D 191 N ARG D 14 SHEET 3 AA7 3 SER D 175 ARG D 179 -1 N ARG D 179 O GLY D 188 SHEET 1 AA8 5 GLY D 79 ALA D 82 0 SHEET 2 AA8 5 VAL D 50 GLY D 54 1 N LEU D 52 O GLY D 79 SHEET 3 AA8 5 LEU D 114 LEU D 122 1 O ILE D 116 N VAL D 51 SHEET 4 AA8 5 ALA D 143 ASP D 151 1 O GLN D 145 N LEU D 117 SHEET 5 AA8 5 TYR D 163 ASN D 167 1 O LYS D 166 N ASP D 151 SHEET 1 AA9 3 SER E 13 MET E 17 0 SHEET 2 AA9 3 GLY E 188 SER E 192 -1 O ILE E 191 N ARG E 14 SHEET 3 AA9 3 SER E 175 ARG E 179 -1 N ARG E 179 O GLY E 188 SHEET 1 AB1 5 GLY E 79 ALA E 82 0 SHEET 2 AB1 5 VAL E 50 GLY E 54 1 N LEU E 52 O GLY E 79 SHEET 3 AB1 5 LEU E 114 LEU E 122 1 O ILE E 116 N VAL E 51 SHEET 4 AB1 5 ALA E 143 ASP E 151 1 O ALA E 147 N LEU E 117 SHEET 5 AB1 5 TYR E 163 ASN E 167 1 O LYS E 166 N ASP E 151 SHEET 1 AB2 3 SER F 13 MET F 17 0 SHEET 2 AB2 3 GLY F 188 SER F 192 -1 O VAL F 189 N LEU F 16 SHEET 3 AB2 3 SER F 175 ARG F 179 -1 N ARG F 179 O GLY F 188 SHEET 1 AB3 5 GLY F 79 ALA F 82 0 SHEET 2 AB3 5 VAL F 50 GLY F 54 1 N LEU F 52 O GLY F 79 SHEET 3 AB3 5 LEU F 114 LEU F 122 1 O ILE F 116 N VAL F 51 SHEET 4 AB3 5 ALA F 143 ASP F 151 1 O GLN F 145 N VAL F 115 SHEET 5 AB3 5 TYR F 163 ASN F 167 1 O LYS F 166 N ASP F 151 CISPEP 1 PRO A 56 THR A 57 0 0.81 CISPEP 2 PRO B 56 THR B 57 0 0.37 CISPEP 3 PRO C 56 THR C 57 0 -0.57 CISPEP 4 PRO D 56 THR D 57 0 0.70 CISPEP 5 PRO E 56 THR E 57 0 2.18 CISPEP 6 PRO F 56 THR F 57 0 -1.04 SITE 1 AC1 4 ARG A 58 HIS A 177 ARG A 179 HOH A 401 SITE 1 AC2 4 ARG C 58 HIS C 177 ARG C 179 HOH C 403 SITE 1 AC3 4 ARG F 58 HIS F 177 ARG F 179 HOH F 423 CRYST1 142.836 127.770 90.777 90.00 90.38 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007001 0.000000 0.000047 0.00000 SCALE2 0.000000 0.007827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011016 0.00000