HEADER LIGASE,TRANSFERASE 23-FEB-16 5ICH TITLE CRYSTAL STRUCTURE OF ENTEROCOCCUS FAECALIS LIPOATE-PROTEIN LIGASE A TITLE 2 (LPLA-2) IN COMPLEX WITH 8BO-AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOATE--PROTEIN LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.7.63; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS (STRAIN ATCC 700802 / SOURCE 3 V583); SOURCE 4 ORGANISM_TAXID: 226185; SOURCE 5 STRAIN: ATCC 700802 / V583; SOURCE 6 GENE: LPLA-2, EF_2741; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS LIGASE, PROTEIN-SUBSTRATE COMPLEX, LIPOATE ANALOG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.HUGHES,J.H.SONG,T.ANTOSHCHENKO,H.W.PARK REVDAT 2 27-SEP-23 5ICH 1 REMARK REVDAT 1 15-MAR-17 5ICH 0 JRNL AUTH S.J.HUGHES,J.H.SONG,T.ANTOSHCHENKO,H.W.PARK JRNL TITL CRYSTAL STRUCTURE OF ENTEROCOCCUS FAECALIS LIPOATE-PROTEIN JRNL TITL 2 LIGASE A (LPLA-2) IN COMPLEX WITH 8BO-AMP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 55147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2935 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5385 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 282 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5124 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : 1.10000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.108 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5482 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5125 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7430 ; 1.186 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11811 ; 0.722 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 662 ; 6.057 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 295 ;33.719 ;25.322 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 964 ;12.019 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;16.051 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 790 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6321 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1282 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2618 ; 1.029 ; 0.897 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2616 ; 1.029 ; 0.897 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3290 ; 1.662 ; 1.337 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 247 REMARK 3 ORIGIN FOR THE GROUP (A): -15.5033 0.3132 42.9166 REMARK 3 T TENSOR REMARK 3 T11: 0.0237 T22: 0.0106 REMARK 3 T33: 0.0245 T12: -0.0024 REMARK 3 T13: 0.0056 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 2.5293 L22: 1.1754 REMARK 3 L33: 1.3714 L12: 0.1969 REMARK 3 L13: -0.1131 L23: -0.3676 REMARK 3 S TENSOR REMARK 3 S11: 0.1024 S12: -0.0469 S13: 0.0106 REMARK 3 S21: 0.0713 S22: -0.1003 S23: -0.0704 REMARK 3 S31: 0.0373 S32: 0.0537 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 248 A 334 REMARK 3 ORIGIN FOR THE GROUP (A): -37.3657 8.7414 25.3289 REMARK 3 T TENSOR REMARK 3 T11: 0.0625 T22: 0.0670 REMARK 3 T33: 0.0773 T12: 0.0138 REMARK 3 T13: 0.0133 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 4.1066 L22: 0.7008 REMARK 3 L33: 3.4683 L12: 0.2960 REMARK 3 L13: 1.4372 L23: 0.0432 REMARK 3 S TENSOR REMARK 3 S11: -0.0290 S12: 0.1949 S13: 0.1634 REMARK 3 S21: -0.1677 S22: 0.0442 S23: 0.0725 REMARK 3 S31: -0.1522 S32: -0.1010 S33: -0.0152 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 247 REMARK 3 ORIGIN FOR THE GROUP (A): -13.2876 35.0810 5.7723 REMARK 3 T TENSOR REMARK 3 T11: 0.1106 T22: 0.0331 REMARK 3 T33: 0.0681 T12: -0.0159 REMARK 3 T13: 0.0054 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 2.9683 L22: 1.1989 REMARK 3 L33: 2.5112 L12: -0.3027 REMARK 3 L13: 0.6565 L23: 0.2836 REMARK 3 S TENSOR REMARK 3 S11: 0.0687 S12: -0.0875 S13: 0.0206 REMARK 3 S21: -0.0500 S22: -0.0203 S23: 0.0114 REMARK 3 S31: 0.1129 S32: -0.0374 S33: -0.0484 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 248 B 334 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8340 44.4696 23.4016 REMARK 3 T TENSOR REMARK 3 T11: 0.0928 T22: 0.1467 REMARK 3 T33: 0.0821 T12: -0.0032 REMARK 3 T13: -0.0097 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 4.8551 L22: 1.0930 REMARK 3 L33: 4.3548 L12: -0.4408 REMARK 3 L13: 0.1488 L23: 1.0254 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.1805 S13: 0.1758 REMARK 3 S21: -0.0596 S22: 0.1921 S23: -0.0471 REMARK 3 S31: -0.1890 S32: 0.5464 S33: -0.1283 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5ICH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97905 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58160 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.12600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.0.05 REMARK 200 STARTING MODEL: 5IBY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 UL PROTEIN + 1.5 UL BUFFER (27% REMARK 280 PEG3350, 0.1 M SODIUM CACODYLATE, 0.2 M SODIUM CHLORIDE, PH 5.25) REMARK 280 , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.69150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 VAL A 165 REMARK 465 ARG A 166 REMARK 465 LYS A 167 REMARK 465 ASP A 168 REMARK 465 LYS A 169 REMARK 465 ILE A 170 REMARK 465 GLU A 171 REMARK 465 SER A 172 REMARK 465 LYS A 173 REMARK 465 GLY A 174 REMARK 465 ILE A 175 REMARK 465 LYS A 176 REMARK 465 SER A 177 REMARK 465 VAL A 178 REMARK 465 ARG A 179 REMARK 465 SER A 180 REMARK 465 MET B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 ARG B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 ASP B 91 REMARK 465 GLY B 92 REMARK 465 ASN B 93 REMARK 465 SER B 94 REMARK 465 PHE B 95 REMARK 465 ARG B 96 REMARK 465 LYS B 164 REMARK 465 VAL B 165 REMARK 465 ARG B 166 REMARK 465 LYS B 167 REMARK 465 ASP B 168 REMARK 465 LYS B 169 REMARK 465 ILE B 170 REMARK 465 GLU B 171 REMARK 465 SER B 172 REMARK 465 LYS B 173 REMARK 465 GLY B 174 REMARK 465 ILE B 175 REMARK 465 LYS B 176 REMARK 465 SER B 177 REMARK 465 VAL B 178 REMARK 465 ARG B 179 REMARK 465 SER B 180 REMARK 465 ARG B 181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 25 74.73 -116.05 REMARK 500 SER A 94 -32.56 -133.18 REMARK 500 ARG A 96 -4.63 75.33 REMARK 500 ARG A 122 -55.66 74.44 REMARK 500 ASP A 153 53.43 -148.99 REMARK 500 TYR A 238 -73.29 -112.07 REMARK 500 TYR A 246 -75.53 -108.03 REMARK 500 VAL B 114 69.51 -106.52 REMARK 500 VAL B 114 68.53 -106.52 REMARK 500 ASP B 153 47.59 -152.35 REMARK 500 TYR B 238 -72.96 -113.10 REMARK 500 TYR B 246 -92.86 -110.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SH5 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SH5 B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IBY RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH A DIFFERENT LIGAND. REMARK 900 RELATED ID: 5ICL RELATED DB: PDB REMARK 900 RELATED ID: 5IDH RELATED DB: PDB REMARK 900 RELATED ID: 5IY1 RELATED DB: PDB DBREF 5ICH A 1 334 UNP Q830N7 Q830N7_ENTFA 1 334 DBREF 5ICH B 1 334 UNP Q830N7 Q830N7_ENTFA 1 334 SEQADV 5ICH MET A -17 UNP Q830N7 INITIATING METHIONINE SEQADV 5ICH HIS A -16 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS A -15 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS A -14 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS A -13 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS A -12 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS A -11 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH SER A -10 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH SER A -9 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLY A -8 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH ARG A -7 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLU A -6 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH ASN A -5 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH LEU A -4 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH TYR A -3 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH PHE A -2 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLN A -1 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLY A 0 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH MET B -17 UNP Q830N7 INITIATING METHIONINE SEQADV 5ICH HIS B -16 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS B -15 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS B -14 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS B -13 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS B -12 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH HIS B -11 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH SER B -10 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH SER B -9 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLY B -8 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH ARG B -7 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLU B -6 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH ASN B -5 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH LEU B -4 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH TYR B -3 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH PHE B -2 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLN B -1 UNP Q830N7 EXPRESSION TAG SEQADV 5ICH GLY B 0 UNP Q830N7 EXPRESSION TAG SEQRES 1 A 352 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 352 LEU TYR PHE GLN GLY MET ILE PHE VAL PRO ASN GLU ASN SEQRES 3 A 352 ASN ASP PRO ARG VAL ASN LEU ALA ILE GLU THR TYR LEU SEQRES 4 A 352 LEU THR GLU MET PRO LEU ASP GLU PRO ILE LEU LEU PHE SEQRES 5 A 352 TYR ILE ASN GLU PRO SER ILE ILE ILE GLY ARG ASN GLN SEQRES 6 A 352 ASN THR ILE GLU GLU ILE ASN LYS GLU TYR VAL ASP GLU SEQRES 7 A 352 HIS GLY ILE HIS VAL VAL ARG ARG LEU SER GLY GLY GLY SEQRES 8 A 352 ALA VAL TYR HIS ASP HIS GLY ASN LEU ASN PHE SER PHE SEQRES 9 A 352 ILE MET PRO ASP ASP GLY ASN SER PHE ARG ASP PHE ALA SEQRES 10 A 352 LYS VAL THR GLN PRO ILE ILE GLN ALA LEU HIS ASP LEU SEQRES 11 A 352 GLY VAL GLU GLY ALA GLU LEU LYS GLY ARG ASN ASP LEU SEQRES 12 A 352 VAL ILE ASN ASP MET LYS PHE SER GLY ASN ALA MET TYR SEQRES 13 A 352 ALA THR ASN GLY ARG MET PHE ALA HIS GLY THR LEU MET SEQRES 14 A 352 PHE ASP SER ASP ILE ASP GLU VAL VAL ASN THR LEU LYS SEQRES 15 A 352 VAL ARG LYS ASP LYS ILE GLU SER LYS GLY ILE LYS SER SEQRES 16 A 352 VAL ARG SER ARG VAL THR ASN ILE LYS PRO PHE LEU SER SEQRES 17 A 352 GLU ASP LYS GLN GLU MET THR THR GLU GLU PHE ARG GLN SEQRES 18 A 352 GLU ILE LEU LEU LYS ILE PHE GLY VAL ASP SER ILE ASP SEQRES 19 A 352 GLN VAL LYS THR TYR GLU LEU THR ASP GLN ASP TRP ALA SEQRES 20 A 352 ALA ILE ASN LYS ILE SER GLU GLN TYR TYR ARG ASN TRP SEQRES 21 A 352 ASP TRP ASN TYR GLY LYS SER PRO ALA PHE ASN LEU GLU SEQRES 22 A 352 ARG ARG HIS ARG PHE PRO ILE GLY SER ILE GLU MET LYS SEQRES 23 A 352 MET ASN VAL ALA ASP GLY ALA ILE GLN GLU ILE LYS ILE SEQRES 24 A 352 PHE GLY ASP PHE PHE GLY LEU GLY GLU ILE LYS ASP VAL SEQRES 25 A 352 GLU ASP ILE LEU THR GLY VAL LYS TYR ASP LYS ALA SER SEQRES 26 A 352 LEU GLU GLU ALA ILE ASP GLN ILE ASP VAL LYS LYS TYR SEQRES 27 A 352 PHE GLY ASN ILE GLU LYS GLU ASP LEU LEU GLY LEU ILE SEQRES 28 A 352 TYR SEQRES 1 B 352 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 352 LEU TYR PHE GLN GLY MET ILE PHE VAL PRO ASN GLU ASN SEQRES 3 B 352 ASN ASP PRO ARG VAL ASN LEU ALA ILE GLU THR TYR LEU SEQRES 4 B 352 LEU THR GLU MET PRO LEU ASP GLU PRO ILE LEU LEU PHE SEQRES 5 B 352 TYR ILE ASN GLU PRO SER ILE ILE ILE GLY ARG ASN GLN SEQRES 6 B 352 ASN THR ILE GLU GLU ILE ASN LYS GLU TYR VAL ASP GLU SEQRES 7 B 352 HIS GLY ILE HIS VAL VAL ARG ARG LEU SER GLY GLY GLY SEQRES 8 B 352 ALA VAL TYR HIS ASP HIS GLY ASN LEU ASN PHE SER PHE SEQRES 9 B 352 ILE MET PRO ASP ASP GLY ASN SER PHE ARG ASP PHE ALA SEQRES 10 B 352 LYS VAL THR GLN PRO ILE ILE GLN ALA LEU HIS ASP LEU SEQRES 11 B 352 GLY VAL GLU GLY ALA GLU LEU LYS GLY ARG ASN ASP LEU SEQRES 12 B 352 VAL ILE ASN ASP MET LYS PHE SER GLY ASN ALA MET TYR SEQRES 13 B 352 ALA THR ASN GLY ARG MET PHE ALA HIS GLY THR LEU MET SEQRES 14 B 352 PHE ASP SER ASP ILE ASP GLU VAL VAL ASN THR LEU LYS SEQRES 15 B 352 VAL ARG LYS ASP LYS ILE GLU SER LYS GLY ILE LYS SER SEQRES 16 B 352 VAL ARG SER ARG VAL THR ASN ILE LYS PRO PHE LEU SER SEQRES 17 B 352 GLU ASP LYS GLN GLU MET THR THR GLU GLU PHE ARG GLN SEQRES 18 B 352 GLU ILE LEU LEU LYS ILE PHE GLY VAL ASP SER ILE ASP SEQRES 19 B 352 GLN VAL LYS THR TYR GLU LEU THR ASP GLN ASP TRP ALA SEQRES 20 B 352 ALA ILE ASN LYS ILE SER GLU GLN TYR TYR ARG ASN TRP SEQRES 21 B 352 ASP TRP ASN TYR GLY LYS SER PRO ALA PHE ASN LEU GLU SEQRES 22 B 352 ARG ARG HIS ARG PHE PRO ILE GLY SER ILE GLU MET LYS SEQRES 23 B 352 MET ASN VAL ALA ASP GLY ALA ILE GLN GLU ILE LYS ILE SEQRES 24 B 352 PHE GLY ASP PHE PHE GLY LEU GLY GLU ILE LYS ASP VAL SEQRES 25 B 352 GLU ASP ILE LEU THR GLY VAL LYS TYR ASP LYS ALA SER SEQRES 26 B 352 LEU GLU GLU ALA ILE ASP GLN ILE ASP VAL LYS LYS TYR SEQRES 27 B 352 PHE GLY ASN ILE GLU LYS GLU ASP LEU LEU GLY LEU ILE SEQRES 28 B 352 TYR HET SH5 A 401 33 HET SH5 B 401 33 HETNAM SH5 5'-O-[(S)-[(8-BROMOOCTANOYL)OXY](HYDROXY) HETNAM 2 SH5 PHOSPHORYL]ADENOSINE FORMUL 3 SH5 2(C18 H27 BR N5 O8 P) FORMUL 5 HOH *548(H2 O) HELIX 1 AA1 ASP A 10 MET A 25 1 16 HELIX 2 AA2 ASN A 48 ILE A 53 1 6 HELIX 3 AA3 ASN A 54 GLY A 62 1 9 HELIX 4 AA4 ASP A 97 LEU A 112 1 16 HELIX 5 AA5 ASP A 155 LEU A 163 1 9 HELIX 6 AA6 ILE A 185 LEU A 189 5 5 HELIX 7 AA7 SER A 190 GLN A 194 5 5 HELIX 8 AA8 THR A 197 GLY A 211 1 15 HELIX 9 AA9 SER A 214 VAL A 218 5 5 HELIX 10 AB1 THR A 224 TYR A 238 1 15 HELIX 11 AB2 ASN A 241 TYR A 246 1 6 HELIX 12 AB3 ILE A 291 THR A 299 1 9 HELIX 13 AB4 ASP A 304 GLN A 314 1 11 HELIX 14 AB5 ASP A 316 PHE A 321 1 6 HELIX 15 AB6 GLU A 325 TYR A 334 1 10 HELIX 16 AB7 ASP B 10 MET B 25 1 16 HELIX 17 AB8 ASN B 48 ILE B 53 1 6 HELIX 18 AB9 ASN B 54 GLY B 62 1 9 HELIX 19 AC1 PHE B 98 LEU B 112 1 15 HELIX 20 AC2 ASP B 155 THR B 162 1 8 HELIX 21 AC3 ILE B 185 LEU B 189 5 5 HELIX 22 AC4 SER B 190 GLN B 194 5 5 HELIX 23 AC5 THR B 197 GLY B 211 1 15 HELIX 24 AC6 SER B 214 VAL B 218 5 5 HELIX 25 AC7 THR B 224 TYR B 238 1 15 HELIX 26 AC8 ASN B 241 TYR B 246 1 6 HELIX 27 AC9 ILE B 291 THR B 299 1 9 HELIX 28 AD1 ASP B 304 GLN B 314 1 11 HELIX 29 AD2 ASP B 316 GLY B 322 1 7 HELIX 30 AD3 GLU B 325 TYR B 334 1 10 SHEET 1 AA1 7 ILE A 2 VAL A 4 0 SHEET 2 AA1 7 ILE A 31 TYR A 35 1 O LEU A 32 N ILE A 2 SHEET 3 AA1 7 ASN A 81 PRO A 89 -1 O ILE A 87 N ILE A 31 SHEET 4 AA1 7 ARG A 143 MET A 151 -1 O MET A 144 N MET A 88 SHEET 5 AA1 7 MET A 130 THR A 140 -1 N PHE A 132 O MET A 151 SHEET 6 AA1 7 ASP A 124 ILE A 127 -1 N LEU A 125 O PHE A 132 SHEET 7 AA1 7 GLU A 118 LYS A 120 -1 N GLU A 118 O VAL A 126 SHEET 1 AA2 3 HIS A 64 ARG A 67 0 SHEET 2 AA2 3 SER A 40 ILE A 43 1 N ILE A 41 O HIS A 64 SHEET 3 AA2 3 VAL A 75 HIS A 77 -1 O HIS A 77 N SER A 40 SHEET 1 AA3 3 LEU A 254 PHE A 260 0 SHEET 2 AA3 3 GLY A 263 ALA A 272 -1 O MET A 269 N LEU A 254 SHEET 3 AA3 3 ALA A 275 GLY A 283 -1 O PHE A 282 N GLU A 266 SHEET 1 AA4 7 ILE B 2 VAL B 4 0 SHEET 2 AA4 7 ILE B 31 TYR B 35 1 O LEU B 32 N ILE B 2 SHEET 3 AA4 7 ASN B 81 PRO B 89 -1 O ILE B 87 N ILE B 31 SHEET 4 AA4 7 ARG B 143 MET B 151 -1 O ALA B 146 N PHE B 86 SHEET 5 AA4 7 MET B 130 THR B 140 -1 N THR B 140 O ARG B 143 SHEET 6 AA4 7 ASP B 124 ILE B 127 -1 N LEU B 125 O PHE B 132 SHEET 7 AA4 7 ALA B 117 LYS B 120 -1 N LYS B 120 O ASP B 124 SHEET 1 AA5 3 HIS B 64 ARG B 67 0 SHEET 2 AA5 3 SER B 40 ILE B 43 1 N ILE B 41 O HIS B 64 SHEET 3 AA5 3 VAL B 75 HIS B 77 -1 O VAL B 75 N ILE B 42 SHEET 1 AA6 3 LEU B 254 PHE B 260 0 SHEET 2 AA6 3 GLY B 263 ALA B 272 -1 O MET B 267 N ARG B 256 SHEET 3 AA6 3 ALA B 275 GLY B 283 -1 O GLN B 277 N ASN B 270 SITE 1 AC1 20 TYR A 35 ARG A 68 GLY A 73 ALA A 74 SITE 2 AC1 20 VAL A 75 TYR A 76 HIS A 77 ASN A 81 SITE 3 AC1 20 LYS A 131 GLY A 134 HIS A 147 THR A 149 SITE 4 AC1 20 MET A 151 VAL A 159 HOH A 501 HOH A 512 SITE 5 AC1 20 HOH A 514 HOH A 541 HOH A 578 HOH A 598 SITE 1 AC2 21 TYR B 35 ARG B 68 GLY B 73 ALA B 74 SITE 2 AC2 21 VAL B 75 TYR B 76 HIS B 77 ASN B 81 SITE 3 AC2 21 ASN B 83 LYS B 131 GLY B 134 HIS B 147 SITE 4 AC2 21 THR B 149 MET B 151 VAL B 159 PHE B 286 SITE 5 AC2 21 HOH B 534 HOH B 559 HOH B 579 HOH B 581 SITE 6 AC2 21 HOH B 587 CRYST1 50.917 69.383 97.664 90.00 92.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019640 0.000000 0.000787 0.00000 SCALE2 0.000000 0.014413 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010247 0.00000