HEADER PROTEIN 25-FEB-16 5IEB TITLE SOLUTION STRUCTURE OF SDRG FROM SPHINGOMONAS MELONIS FR1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SENSORY TRANSDUCTION REGULATORY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPHINGOMONAS MELONIS FR1; SOURCE 3 ORGANISM_TAXID: 1090317; SOURCE 4 GENE: SR41_04275; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SINGLE DOMAIN RESPONSE REGULATOR FAT GUY FAMILLY, PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.CAMPAGNE,J.A.VORHOLT,F.H.-T.ALLAIN REVDAT 5 15-MAY-24 5IEB 1 REMARK REVDAT 4 06-NOV-19 5IEB 1 REMARK REVDAT 3 08-MAY-19 5IEB 1 REMARK REVDAT 2 17-AUG-16 5IEB 1 JRNL REVDAT 1 20-JUL-16 5IEB 0 JRNL AUTH S.CAMPAGNE,S.DINTNER,L.GOTTSCHLICH,M.THIBAULT, JRNL AUTH 2 M.BORTFELD-MILLER,A.KACZMARCZYK,A.FRANCEZ-CHARLOT, JRNL AUTH 3 F.H.ALLAIN,J.A.VORHOLT JRNL TITL ROLE OF THE PFXFATG[G/Y] MOTIF IN THE ACTIVATION OF SDRG, A JRNL TITL 2 RESPONSE REGULATOR INVOLVED IN THE ALPHAPROTEOBACTERIAL JRNL TITL 3 GENERAL STRESS RESPONSE. JRNL REF STRUCTURE V. 24 1237 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27396826 JRNL DOI 10.1016/J.STR.2016.05.015 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 12 REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IEB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218724. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 SDRG, 10 MM NAPO4, 50 MM NACL, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY AROMATIC; 3D 1H REMARK 210 -13C NOESY ALIPHATIC; 3D 1H-15N REMARK 210 NOESY; 3D HNCO; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D H(CCO)NH; 3D C(CO) REMARK 210 NH; 3D HCCH-TOCSY; 1D H REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 3.96, TOPSPIN 3.2, CARA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 PRO A 119 REMARK 465 ARG A 120 REMARK 465 GLY A 121 REMARK 465 SER A 122 REMARK 465 VAL A 123 REMARK 465 GLU A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 5 -30.88 -141.52 REMARK 500 1 LEU A 59 -165.08 -105.92 REMARK 500 1 SER A 86 -9.25 -148.80 REMARK 500 1 SER A 89 32.67 -77.51 REMARK 500 1 GLN A 101 -120.51 -139.34 REMARK 500 2 THR A 5 -38.77 -148.61 REMARK 500 2 SER A 86 11.57 55.95 REMARK 500 2 SER A 89 36.35 -77.28 REMARK 500 2 GLN A 101 -120.21 -139.82 REMARK 500 3 THR A 5 -32.99 -144.70 REMARK 500 3 LEU A 59 -164.79 -106.05 REMARK 500 3 SER A 89 36.39 -82.49 REMARK 500 3 GLN A 101 -123.99 -141.86 REMARK 500 4 THR A 5 -31.93 -139.57 REMARK 500 4 ASP A 88 4.92 -69.82 REMARK 500 4 SER A 89 38.53 -80.52 REMARK 500 4 GLN A 101 -127.54 -140.32 REMARK 500 5 THR A 5 -33.57 -142.30 REMARK 500 5 SER A 86 10.86 56.89 REMARK 500 5 SER A 89 34.95 -78.45 REMARK 500 5 GLN A 101 -120.84 -139.54 REMARK 500 6 THR A 5 -46.47 -146.92 REMARK 500 6 LEU A 59 -163.53 -106.25 REMARK 500 6 SER A 86 -12.55 -142.80 REMARK 500 6 SER A 89 29.40 -76.67 REMARK 500 6 GLN A 101 -117.70 -138.96 REMARK 500 7 THR A 5 -34.48 -141.57 REMARK 500 7 LEU A 59 -164.15 -105.43 REMARK 500 7 ASP A 87 15.21 57.90 REMARK 500 7 SER A 89 43.74 -78.23 REMARK 500 7 GLN A 101 -124.86 -139.24 REMARK 500 8 THR A 5 -41.05 -135.81 REMARK 500 8 LEU A 59 -166.52 -105.62 REMARK 500 8 SER A 86 8.22 56.98 REMARK 500 8 SER A 89 30.76 -78.10 REMARK 500 8 PRO A 103 105.91 -54.69 REMARK 500 9 THR A 5 -34.22 -142.07 REMARK 500 9 SER A 86 12.39 52.57 REMARK 500 9 SER A 89 33.08 -78.01 REMARK 500 9 GLN A 101 -117.49 -139.55 REMARK 500 10 THR A 5 -42.18 -151.12 REMARK 500 10 SER A 86 -10.70 -143.18 REMARK 500 10 SER A 89 36.28 -76.72 REMARK 500 10 GLN A 101 -121.80 -139.64 REMARK 500 10 LEU A 117 -37.28 -131.04 REMARK 500 11 THR A 5 -32.04 -140.65 REMARK 500 11 LEU A 59 -168.42 -102.15 REMARK 500 11 ASP A 76 17.58 58.62 REMARK 500 11 ASP A 87 15.39 56.68 REMARK 500 11 GLN A 101 -123.49 -139.43 REMARK 500 REMARK 500 THIS ENTRY HAS 89 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30023 RELATED DB: BMRB DBREF1 5IEB A 1 116 UNP A0A0D1MA58_9SPHN DBREF2 5IEB A A0A0D1MA58 1 116 SEQADV 5IEB LEU A 117 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB VAL A 118 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB PRO A 119 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB ARG A 120 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB GLY A 121 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB SER A 122 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB VAL A 123 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB GLU A 124 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 125 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 126 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 127 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 128 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 129 UNP A0A0D1MA5 EXPRESSION TAG SEQADV 5IEB HIS A 130 UNP A0A0D1MA5 EXPRESSION TAG SEQRES 1 A 130 MET SER ALA LEU THR GLN ILE LEU ILE VAL GLU ASP GLU SEQRES 2 A 130 PRO LEU ILE ALA MET MET LEU GLU ASP PHE LEU GLU VAL SEQRES 3 A 130 LEU ASP LYS THR PRO VAL GLY THR VAL ASP THR VAL ALA SEQRES 4 A 130 GLY ALA LEU ALA ARG VAL GLU ASP GLY GLY ILE ASP ALA SEQRES 5 A 130 ALA ILE LEU ASP VAL ASN LEU ARG GLY GLY GLU LYS SER SEQRES 6 A 130 THR PRO VAL ALA GLU ALA LEU ALA ALA ARG ASP ILE PRO SEQRES 7 A 130 PHE VAL PHE ALA THR GLY GLY SER ASP ASP SER VAL ASP SEQRES 8 A 130 SER ARG PHE ARG ASP ARG PRO VAL LEU GLN LYS PRO PHE SEQRES 9 A 130 THR MET ASP GLY VAL ALA LYS ALA LEU ALA ALA LEU LEU SEQRES 10 A 130 VAL PRO ARG GLY SER VAL GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 GLU A 13 LEU A 27 1 15 HELIX 2 AA2 THR A 37 GLU A 46 1 10 HELIX 3 AA3 LEU A 59 GLU A 63 5 5 HELIX 4 AA4 VAL A 68 ARG A 75 1 8 HELIX 5 AA5 THR A 105 LEU A 116 1 12 SHEET 1 AA1 5 THR A 30 VAL A 35 0 SHEET 2 AA1 5 GLN A 6 VAL A 10 1 N ILE A 7 O THR A 30 SHEET 3 AA1 5 ALA A 52 ASP A 56 1 O ALA A 52 N LEU A 8 SHEET 4 AA1 5 PHE A 79 ALA A 82 1 O VAL A 80 N LEU A 55 SHEET 5 AA1 5 VAL A 99 LEU A 100 1 O LEU A 100 N PHE A 81 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.001000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.001000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001000 0.00000 MODEL 1