HEADER BLOOD CLOTTING 25-FEB-16 5IEC TITLE STRUCTURAL BASIS FOR THERAPEUTIC INHIBITION OF COMPLEMENT C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RACI2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIPICEPHALUS APPENDICULATUS; SOURCE 3 ORGANISM_TAXID: 34631; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEMENT INHIBITOR, RACI, STRUCTURE FROM CYANA 3.96, BLOOD CLOTTING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR D.SHEPPARD,S.M.LEA REVDAT 5 14-JUN-23 5IEC 1 REMARK SSBOND REVDAT 4 08-MAY-19 5IEC 1 REMARK REVDAT 3 07-FEB-18 5IEC 1 AUTHOR REVDAT 2 11-MAY-16 5IEC 1 JRNL REVDAT 1 27-APR-16 5IEC 0 JRNL AUTH M.M.JORE,S.JOHNSON,D.SHEPPARD,N.M.BARBER,Y.I.LI,M.A.NUNN, JRNL AUTH 2 H.ELMLUND,S.M.LEA JRNL TITL STRUCTURAL BASIS FOR THERAPEUTIC INHIBITION OF COMPLEMENT JRNL TITL 2 C5. JRNL REF NAT.STRUCT.MOL.BIOL. V. 23 378 2016 JRNL REFN ESSN 1545-9985 JRNL PMID 27018802 JRNL DOI 10.1038/NSMB.3196 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IEC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218442. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 162.7 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 330 UM [U-100% 13C] [U-100% 15N] REMARK 210 RACI2, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY ALIPHATIC; 3D 1H REMARK 210 -15N NOESY; 3D CBCA(CO)NH; 3D REMARK 210 CBCANH; 3D HNCO; 3D HCCH-TOCSY; REMARK 210 3D HNCA; 3D HN(CO)CA; 3D HBHA(CO) REMARK 210 NH; 3D CC(CO)NH; 3D HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, CS-ROSETTA, REMARK 210 CYANA 3.97 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 20 -171.48 -69.80 REMARK 500 1 ASN A 46 26.30 48.59 REMARK 500 1 PRO A 66 -160.29 -69.73 REMARK 500 1 LYS A 69 163.77 -48.94 REMARK 500 1 PRO A 83 -171.89 -69.81 REMARK 500 2 PRO A 20 80.04 -69.75 REMARK 500 2 ASN A 46 27.44 47.54 REMARK 500 2 PRO A 66 -160.35 -69.79 REMARK 500 2 PRO A 83 -177.40 -69.81 REMARK 500 3 PRO A 28 -165.01 -69.72 REMARK 500 3 ASN A 46 26.44 48.10 REMARK 500 3 PRO A 66 -161.78 -69.78 REMARK 500 3 LYS A 69 162.36 -49.98 REMARK 500 3 PRO A 83 -170.77 -69.74 REMARK 500 4 PRO A 20 97.60 -69.73 REMARK 500 4 PRO A 28 -164.98 -69.78 REMARK 500 4 ASN A 46 26.03 49.15 REMARK 500 4 PRO A 66 -160.93 -69.78 REMARK 500 4 PRO A 83 -87.44 -69.78 REMARK 500 5 ASN A 46 28.24 46.81 REMARK 500 5 PRO A 57 1.05 -69.76 REMARK 500 5 PRO A 66 -159.99 -69.73 REMARK 500 5 PRO A 83 -175.87 -69.74 REMARK 500 6 PRO A 28 52.53 -69.70 REMARK 500 6 LYS A 32 102.09 -53.77 REMARK 500 6 ASN A 46 28.69 45.52 REMARK 500 6 PRO A 57 5.00 -69.82 REMARK 500 6 PRO A 66 -157.33 -69.77 REMARK 500 6 LEU A 72 162.16 -49.67 REMARK 500 7 ASN A 46 27.96 46.41 REMARK 500 7 PRO A 57 3.00 -69.72 REMARK 500 7 PRO A 66 -158.43 -69.75 REMARK 500 7 LEU A 72 161.72 -49.04 REMARK 500 8 ASN A 46 28.11 46.25 REMARK 500 8 PRO A 57 11.65 -69.72 REMARK 500 8 PRO A 66 -160.95 -69.70 REMARK 500 8 LEU A 72 162.69 -47.69 REMARK 500 9 PRO A 20 94.44 -69.75 REMARK 500 9 ASN A 46 28.25 46.97 REMARK 500 9 PRO A 57 4.53 -69.70 REMARK 500 9 PRO A 66 -85.05 -69.72 REMARK 500 9 PRO A 83 -171.39 -69.71 REMARK 500 10 PRO A 20 87.46 -69.72 REMARK 500 10 PRO A 28 -165.03 -69.82 REMARK 500 10 ASN A 46 27.73 47.76 REMARK 500 10 PRO A 66 -155.12 -69.79 REMARK 500 10 PRO A 83 -170.17 -69.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30024 RELATED DB: BMRB DBREF 5IEC A 19 88 PDB 5IEC 5IEC 19 88 SEQRES 1 A 70 GLY PRO MET GLU GLU ALA ASN THR THR PRO ILE SER VAL SEQRES 2 A 70 LYS ASP GLN CYS ALA ASN VAL THR CYS ARG ARG THR VAL SEQRES 3 A 70 ASP ASN ARG GLY LYS ARG HIS ILE ASP GLY CYS PRO PRO SEQRES 4 A 70 GLY CYS LEU CYS VAL LEU LYS GLY PRO ASP SER LYS ASP SEQRES 5 A 70 ASN LEU ASP GLY THR CYS TYR LEU LEU ALA THR THR PRO SEQRES 6 A 70 LYS SER THR THR THR HELIX 1 AA1 GLU A 22 THR A 27 1 6 SHEET 1 AA1 2 CYS A 40 ARG A 41 0 SHEET 2 AA1 2 ASP A 73 GLY A 74 -1 O GLY A 74 N CYS A 40 SHEET 1 AA2 2 CYS A 59 LEU A 60 0 SHEET 2 AA2 2 TYR A 77 LEU A 78 -1 O TYR A 77 N LEU A 60 SSBOND 1 CYS A 35 CYS A 59 1555 1555 0.61 SSBOND 2 CYS A 40 CYS A 61 1555 1555 2.09 SSBOND 3 CYS A 55 CYS A 76 1555 1555 2.15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.001000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.001000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001000 0.00000 MODEL 1