data_5IHD # _entry.id 5IHD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5IHD pdb_00005ihd 10.2210/pdb5ihd/pdb WWPDB D_1000218820 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-29 2 'Structure model' 1 1 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 23 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 28 2 'Structure model' '_pdbx_struct_conn_angle.value' 29 2 'Structure model' '_struct_conn.pdbx_dist_value' 30 2 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 31 2 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 32 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 2 'Structure model' '_struct_conn.ptnr1_symmetry' 40 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 41 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 42 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 43 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 44 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 45 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 46 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 47 2 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2016-06-29 _pdbx_database_PDB_obs_spr.pdb_id 5IHD _pdbx_database_PDB_obs_spr.replace_pdb_id 4XQY _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IHD _pdbx_database_status.recvd_initial_deposition_date 2016-02-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rohner, M.' 1 ? 'Medina-Molner, A.' 2 ? 'Spingler, B.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Inorg.Chem. _citation.journal_id_ASTM INOCAJ _citation.journal_id_CSD 0009 _citation.journal_id_ISSN 0020-1669 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 55 _citation.language ? _citation.page_first 6130 _citation.page_last 6140 _citation.title 'N,N,O and N,O,N Meridional cis Coordination of Two Guanines to Copper(II) by d(CGCGCG)2.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.inorgchem.6b00672 _citation.pdbx_database_id_PubMed 27266259 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rohner, M.' 1 ? primary 'Medina-Molner, A.' 2 ? primary 'Spingler, B.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') ; 1810.205 4 ? ? ? ? 2 non-polymer syn 'COPPER (II) ION' 63.546 4 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 non-polymer syn '(2S)-2-HYDROXYPROPANOIC ACID' 90.078 2 ? ? ? ? 5 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 6 water nat water 18.015 133 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COPPER (II) ION' CU 3 'CALCIUM ION' CA 4 '(2S)-2-HYDROXYPROPANOIC ACID' 2OP 5 'SUCCINIC ACID' SIN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2OP non-polymer . '(2S)-2-HYDROXYPROPANOIC ACID' ? 'C3 H6 O3' 90.078 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CU non-polymer . 'COPPER (II) ION' ? 'Cu 2' 63.546 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DG 4 4 4 DG DG B . n B 1 5 DC 5 5 5 DC DC B . n B 1 6 DG 6 6 6 DG DG B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DC 3 3 3 DC DC C . n C 1 4 DG 4 4 4 DG DG C . n C 1 5 DC 5 5 5 DC DC C . n C 1 6 DG 6 6 6 DG DG C . n D 1 1 DC 1 1 1 DC DC D . n D 1 2 DG 2 2 2 DG DG D . n D 1 3 DC 3 3 3 DC DC D . n D 1 4 DG 4 4 4 DG DG D . n D 1 5 DC 5 5 5 DC DC D . n D 1 6 DG 6 6 6 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CU 1 101 2 CU CU A . F 3 CA 1 102 6 CA CA A . G 4 2OP 1 103 1 2OP 2OP A . H 2 CU 1 101 1 CU CU B . I 2 CU 1 102 3 CU CU B . J 4 2OP 1 103 2 2OP 2OP B . K 2 CU 1 101 4 CU CU C . L 3 CA 1 102 5 CA CA C . M 5 SIN 1 101 3 SIN SIN D . N 6 HOH 1 201 240 HOH HOH A . N 6 HOH 2 202 232 HOH HOH A . N 6 HOH 3 203 191 HOH HOH A . N 6 HOH 4 204 218 HOH HOH A . N 6 HOH 5 205 131 HOH HOH A . N 6 HOH 6 206 143 HOH HOH A . N 6 HOH 7 207 151 HOH HOH A . N 6 HOH 8 208 192 HOH HOH A . N 6 HOH 9 209 146 HOH HOH A . N 6 HOH 10 210 156 HOH HOH A . N 6 HOH 11 211 164 HOH HOH A . N 6 HOH 12 212 207 HOH HOH A . N 6 HOH 13 213 122 HOH HOH A . N 6 HOH 14 214 216 HOH HOH A . N 6 HOH 15 215 198 HOH HOH A . N 6 HOH 16 216 135 HOH HOH A . N 6 HOH 17 217 220 HOH HOH A . N 6 HOH 18 218 189 HOH HOH A . N 6 HOH 19 219 214 HOH HOH A . N 6 HOH 20 220 211 HOH HOH A . N 6 HOH 21 221 248 HOH HOH A . N 6 HOH 22 222 209 HOH HOH A . N 6 HOH 23 223 173 HOH HOH A . N 6 HOH 24 224 249 HOH HOH A . N 6 HOH 25 225 120 HOH HOH A . N 6 HOH 26 226 167 HOH HOH A . N 6 HOH 27 227 145 HOH HOH A . N 6 HOH 28 228 197 HOH HOH A . N 6 HOH 29 229 186 HOH HOH A . N 6 HOH 30 230 247 HOH HOH A . N 6 HOH 31 231 238 HOH HOH A . N 6 HOH 32 232 246 HOH HOH A . N 6 HOH 33 233 177 HOH HOH A . N 6 HOH 34 234 188 HOH HOH A . N 6 HOH 35 235 123 HOH HOH A . N 6 HOH 36 236 172 HOH HOH A . N 6 HOH 37 237 165 HOH HOH A . N 6 HOH 38 238 244 HOH HOH A . N 6 HOH 39 239 154 HOH HOH A . O 6 HOH 1 201 201 HOH HOH B . O 6 HOH 2 202 212 HOH HOH B . O 6 HOH 3 203 213 HOH HOH B . O 6 HOH 4 204 130 HOH HOH B . O 6 HOH 5 205 250 HOH HOH B . O 6 HOH 6 206 235 HOH HOH B . O 6 HOH 7 207 179 HOH HOH B . O 6 HOH 8 208 204 HOH HOH B . O 6 HOH 9 209 144 HOH HOH B . O 6 HOH 10 210 111 HOH HOH B . O 6 HOH 11 211 102 HOH HOH B . O 6 HOH 12 212 225 HOH HOH B . O 6 HOH 13 213 107 HOH HOH B . O 6 HOH 14 214 106 HOH HOH B . O 6 HOH 15 215 100 HOH HOH B . O 6 HOH 16 216 137 HOH HOH B . O 6 HOH 17 217 170 HOH HOH B . O 6 HOH 18 218 116 HOH HOH B . O 6 HOH 19 219 105 HOH HOH B . O 6 HOH 20 220 153 HOH HOH B . O 6 HOH 21 221 155 HOH HOH B . O 6 HOH 22 222 141 HOH HOH B . O 6 HOH 23 223 171 HOH HOH B . O 6 HOH 24 224 125 HOH HOH B . O 6 HOH 25 225 234 HOH HOH B . O 6 HOH 26 226 183 HOH HOH B . O 6 HOH 27 227 245 HOH HOH B . P 6 HOH 1 201 117 HOH HOH C . P 6 HOH 2 202 166 HOH HOH C . P 6 HOH 3 203 196 HOH HOH C . P 6 HOH 4 204 142 HOH HOH C . P 6 HOH 5 205 224 HOH HOH C . P 6 HOH 6 206 119 HOH HOH C . P 6 HOH 7 207 110 HOH HOH C . P 6 HOH 8 208 219 HOH HOH C . P 6 HOH 9 209 193 HOH HOH C . P 6 HOH 10 210 133 HOH HOH C . P 6 HOH 11 211 215 HOH HOH C . P 6 HOH 12 212 108 HOH HOH C . P 6 HOH 13 213 114 HOH HOH C . P 6 HOH 14 214 118 HOH HOH C . P 6 HOH 15 215 101 HOH HOH C . P 6 HOH 16 216 134 HOH HOH C . P 6 HOH 17 217 226 HOH HOH C . P 6 HOH 18 218 206 HOH HOH C . P 6 HOH 19 219 202 HOH HOH C . P 6 HOH 20 220 205 HOH HOH C . P 6 HOH 21 221 152 HOH HOH C . P 6 HOH 22 222 129 HOH HOH C . P 6 HOH 23 223 222 HOH HOH C . P 6 HOH 24 224 149 HOH HOH C . P 6 HOH 25 225 200 HOH HOH C . P 6 HOH 26 226 182 HOH HOH C . P 6 HOH 27 227 190 HOH HOH C . P 6 HOH 28 228 221 HOH HOH C . Q 6 HOH 1 201 181 HOH HOH D . Q 6 HOH 2 202 112 HOH HOH D . Q 6 HOH 3 203 138 HOH HOH D . Q 6 HOH 4 204 140 HOH HOH D . Q 6 HOH 5 205 147 HOH HOH D . Q 6 HOH 6 206 139 HOH HOH D . Q 6 HOH 7 207 157 HOH HOH D . Q 6 HOH 8 208 176 HOH HOH D . Q 6 HOH 9 209 103 HOH HOH D . Q 6 HOH 10 210 160 HOH HOH D . Q 6 HOH 11 211 228 HOH HOH D . Q 6 HOH 12 212 203 HOH HOH D . Q 6 HOH 13 213 104 HOH HOH D . Q 6 HOH 14 214 132 HOH HOH D . Q 6 HOH 15 215 180 HOH HOH D . Q 6 HOH 16 216 162 HOH HOH D . Q 6 HOH 17 217 109 HOH HOH D . Q 6 HOH 18 218 128 HOH HOH D . Q 6 HOH 19 219 217 HOH HOH D . Q 6 HOH 20 220 115 HOH HOH D . Q 6 HOH 21 221 168 HOH HOH D . Q 6 HOH 22 222 150 HOH HOH D . Q 6 HOH 23 223 127 HOH HOH D . Q 6 HOH 24 224 126 HOH HOH D . Q 6 HOH 25 225 185 HOH HOH D . Q 6 HOH 26 226 163 HOH HOH D . Q 6 HOH 27 227 121 HOH HOH D . Q 6 HOH 28 228 210 HOH HOH D . Q 6 HOH 29 229 208 HOH HOH D . Q 6 HOH 30 230 148 HOH HOH D . Q 6 HOH 31 231 194 HOH HOH D . Q 6 HOH 32 232 243 HOH HOH D . Q 6 HOH 33 233 158 HOH HOH D . Q 6 HOH 34 234 199 HOH HOH D . Q 6 HOH 35 235 178 HOH HOH D . Q 6 HOH 36 236 187 HOH HOH D . Q 6 HOH 37 237 124 HOH HOH D . Q 6 HOH 38 238 161 HOH HOH D . Q 6 HOH 39 239 184 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1834 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? X-Area ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXS ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 107.50 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5IHD _cell.details ? _cell.formula_units_Z ? _cell.length_a 27.487 _cell.length_a_esd ? _cell.length_b 35.576 _cell.length_b_esd ? _cell.length_c 31.044 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IHD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IHD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.2 mM d(CG)3, 1.2 mM di copper complex, 0.25 M MES pH 6, 25 mM Ca(lactate)2, 2.5% EtOAc' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 183 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type STOE _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2005-11-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'SEALED TUBE' _diffrn_source.target ? _diffrn_source.type 'Long fine focus' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5IHD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.570 _reflns.d_resolution_low 26.215 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7934 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 4 _reflns.observed_criterion_sigma_I 2 _reflns.percent_possible_obs 97.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.8 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.51 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.57 _reflns_shell.d_res_low 1.70 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.77 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 89 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.1736 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.96 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5IHD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.570 _refine.ls_d_res_low 26.215 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7934 _refine.ls_number_reflns_R_free 408 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.90 _refine.ls_percent_reflns_R_free 5.14 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1620 _refine.ls_R_factor_R_free 0.1900 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1605 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2DCG _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.20 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.15 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 480 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 639 _refine_hist.d_res_high 1.570 _refine_hist.d_res_low 26.215 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 570 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.048 ? 873 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 29.428 ? 244 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.054 ? 98 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 28 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5701 1.7972 . . 125 2391 94.00 . . . 0.2077 . 0.1736 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7972 2.2641 . . 137 2564 100.00 . . . 0.2199 . 0.1703 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2641 26.2185 . . 146 2571 100.00 . . . 0.1718 . 0.1518 . . . . . . . . . . # _struct.entry_id 5IHD _struct.title 'Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by L-lactate and succinate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IHD _struct_keywords.text 'Z-DNA, copper(II), DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 2 ? I N N 2 ? J N N 4 ? K N N 2 ? L N N 3 ? M N N 5 ? N N N 6 ? O N N 6 ? P N N 6 ? Q N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5IHD _struct_ref.pdbx_db_accession 5IHD _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5IHD A 1 ? 6 ? 5IHD 1 ? 6 ? 1 6 2 1 5IHD B 1 ? 6 ? 5IHD 1 ? 6 ? 1 6 3 1 5IHD C 1 ? 6 ? 5IHD 1 ? 6 ? 1 6 4 1 5IHD D 1 ? 6 ? 5IHD 1 ? 6 ? 1 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 790 ? 1 MORE -15 ? 1 'SSA (A^2)' 2550 ? 2 'ABSA (A^2)' 770 ? 2 MORE -15 ? 2 'SSA (A^2)' 2440 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,J,N,O 2 1 C,D,K,L,M,P,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 N7 ? ? ? 1_555 E CU . CU ? ? A DG 2 A CU 101 1_555 ? ? ? ? ? ? ? 1.980 ? ? metalc2 metalc ? ? A DG 2 OP1 ? ? ? 1_555 F CA . CA ? ? A DG 2 A CA 102 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc3 metalc ? ? A DG 2 OP2 ? ? ? 1_555 L CA . CA ? ? A DG 2 C CA 102 1_655 ? ? ? ? ? ? ? 2.348 ? ? metalc4 metalc ? ? E CU . CU ? ? ? 1_555 G 2OP . OHN ? ? A CU 101 A 2OP 103 1_555 ? ? ? ? ? ? ? 2.245 ? ? metalc5 metalc ? ? E CU . CU ? ? ? 1_555 G 2OP . OXT ? ? A CU 101 A 2OP 103 1_555 ? ? ? ? ? ? ? 1.947 ? ? metalc6 metalc ? ? E CU . CU ? ? ? 1_555 D DG 2 N7 ? ? A CU 101 D DG 2 1_555 ? ? ? ? ? ? ? 1.996 ? ? metalc7 metalc ? ? E CU . CU ? ? ? 1_555 M SIN . O4 ? ? A CU 101 D SIN 101 1_555 ? ? ? ? ? ? ? 1.984 ? ? metalc8 metalc ? ? F CA . CA ? ? ? 1_555 N HOH . O ? ? A CA 102 A HOH 222 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc9 metalc ? ? F CA . CA ? ? ? 1_455 C DG 2 OP2 ? ? A CA 102 C DG 2 1_555 ? ? ? ? ? ? ? 2.347 ? ? metalc10 metalc ? ? F CA . CA ? ? ? 2_545 D DC 3 OP1 A ? A CA 102 D DC 3 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc11 metalc ? ? F CA . CA ? ? ? 2_545 D DC 3 OP2 B ? A CA 102 D DC 3 1_555 ? ? ? ? ? ? ? 2.549 ? ? metalc12 metalc ? ? F CA . CA ? ? ? 1_555 Q HOH . O ? ? A CA 102 D HOH 228 2_555 ? ? ? ? ? ? ? 2.460 ? ? metalc13 metalc ? ? F CA . CA ? ? ? 1_555 Q HOH . O ? ? A CA 102 D HOH 229 2_555 ? ? ? ? ? ? ? 2.505 ? ? metalc14 metalc ? ? N HOH . O ? ? ? 1_455 L CA . CA ? ? A HOH 212 C CA 102 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc15 metalc ? ? N HOH . O ? ? ? 1_455 L CA . CA ? ? A HOH 228 C CA 102 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc16 metalc ? ? B DG 2 N7 ? ? ? 1_555 H CU . CU ? ? B DG 2 B CU 101 1_555 ? ? ? ? ? ? ? 1.987 ? ? metalc17 metalc ? ? B DC 5 OP1 B ? ? 1_555 I CU . CU ? ? B DC 5 B CU 102 1_555 ? ? ? ? ? ? ? 2.699 ? ? metalc18 metalc ? ? B DG 6 N7 ? ? ? 1_555 I CU . CU ? ? B DG 6 B CU 102 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc19 metalc ? ? H CU . CU ? ? ? 1_555 J 2OP . O ? ? B CU 101 B 2OP 103 1_555 ? ? ? ? ? ? ? 1.982 ? ? metalc20 metalc ? ? H CU . CU ? ? ? 1_555 J 2OP . OHN ? ? B CU 101 B 2OP 103 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc21 metalc ? ? H CU . CU ? ? ? 1_555 C DG 2 N7 ? ? B CU 101 C DG 2 1_555 ? ? ? ? ? ? ? 1.987 ? ? metalc22 metalc ? ? H CU . CU ? ? ? 1_555 M SIN . O1 ? ? B CU 101 D SIN 101 1_555 ? ? ? ? ? ? ? 1.968 ? ? metalc23 metalc ? ? I CU . CU ? ? ? 1_555 O HOH . O ? ? B CU 102 B HOH 201 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc24 metalc ? ? I CU . CU ? ? ? 1_555 O HOH . O ? ? B CU 102 B HOH 208 1_555 ? ? ? ? ? ? ? 1.798 ? ? metalc25 metalc ? ? I CU . CU ? ? ? 1_555 O HOH . O ? ? B CU 102 B HOH 209 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc26 metalc ? ? O HOH . O ? ? ? 2_555 K CU . CU ? ? B HOH 208 C CU 101 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc27 metalc ? ? C DG 2 OP1 ? ? ? 1_555 L CA . CA ? ? C DG 2 C CA 102 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc28 metalc ? ? C DG 4 N7 ? ? ? 1_555 K CU . CU ? ? C DG 4 C CU 101 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc29 metalc ? ? K CU . CU ? ? ? 1_555 P HOH . O ? ? C CU 101 C HOH 219 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc30 metalc ? ? K CU . CU ? ? ? 2_445 D DG 6 N7 ? ? C CU 101 D DG 6 1_555 ? ? ? ? ? ? ? 1.989 ? ? metalc31 metalc ? ? K CU . CU ? ? ? 1_555 Q HOH . O ? ? C CU 101 D HOH 212 2_455 ? ? ? ? ? ? ? 2.111 ? ? metalc32 metalc ? ? L CA . CA ? ? ? 1_555 P HOH . O ? ? C CA 102 C HOH 218 1_555 ? ? ? ? ? ? ? 2.456 ? ? metalc33 metalc ? ? L CA . CA ? ? ? 1_555 P HOH . O ? ? C CA 102 C HOH 220 1_555 ? ? ? ? ? ? ? 2.488 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 OHN ? G 2OP . ? A 2OP 103 ? 1_555 95.2 ? 2 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 OXT ? G 2OP . ? A 2OP 103 ? 1_555 90.2 ? 3 OHN ? G 2OP . ? A 2OP 103 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 OXT ? G 2OP . ? A 2OP 103 ? 1_555 78.9 ? 4 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 N7 ? D DG 2 ? D DG 2 ? 1_555 160.0 ? 5 OHN ? G 2OP . ? A 2OP 103 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 N7 ? D DG 2 ? D DG 2 ? 1_555 104.6 ? 6 OXT ? G 2OP . ? A 2OP 103 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 N7 ? D DG 2 ? D DG 2 ? 1_555 90.4 ? 7 N7 ? A DG 2 ? A DG 2 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 O4 ? M SIN . ? D SIN 101 ? 1_555 87.2 ? 8 OHN ? G 2OP . ? A 2OP 103 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 O4 ? M SIN . ? D SIN 101 ? 1_555 107.9 ? 9 OXT ? G 2OP . ? A 2OP 103 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 O4 ? M SIN . ? D SIN 101 ? 1_555 173.0 ? 10 N7 ? D DG 2 ? D DG 2 ? 1_555 CU ? E CU . ? A CU 101 ? 1_555 O4 ? M SIN . ? D SIN 101 ? 1_555 89.8 ? 11 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? N HOH . ? A HOH 222 ? 1_555 89.8 ? 12 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 ? C DG 2 ? C DG 2 ? 1_555 44.3 ? 13 O ? N HOH . ? A HOH 222 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 ? C DG 2 ? C DG 2 ? 1_555 48.0 ? 14 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP1 A D DC 3 ? D DC 3 ? 1_555 64.8 ? 15 O ? N HOH . ? A HOH 222 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP1 A D DC 3 ? D DC 3 ? 1_555 42.0 ? 16 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP1 A D DC 3 ? D DC 3 ? 1_555 46.4 ? 17 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 B D DC 3 ? D DC 3 ? 1_555 63.0 ? 18 O ? N HOH . ? A HOH 222 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 B D DC 3 ? D DC 3 ? 1_555 43.1 ? 19 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 B D DC 3 ? D DC 3 ? 1_555 45.5 ? 20 OP1 A D DC 3 ? D DC 3 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 OP2 B D DC 3 ? D DC 3 ? 1_555 1.8 ? 21 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 228 ? 2_555 177.7 ? 22 O ? N HOH . ? A HOH 222 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 228 ? 2_555 91.0 ? 23 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 228 ? 2_555 137.0 ? 24 OP1 A D DC 3 ? D DC 3 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 228 ? 2_555 114.6 ? 25 OP2 B D DC 3 ? D DC 3 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 228 ? 2_555 116.4 ? 26 OP1 ? A DG 2 ? A DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 101.4 ? 27 O ? N HOH . ? A HOH 222 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 167.4 ? 28 OP2 ? C DG 2 ? C DG 2 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 140.3 ? 29 OP1 A D DC 3 ? D DC 3 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 149.3 ? 30 OP2 B D DC 3 ? D DC 3 ? 1_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 148.3 ? 31 O ? Q HOH . ? D HOH 228 ? 2_555 CA ? F CA . ? A CA 102 ? 1_555 O ? Q HOH . ? D HOH 229 ? 2_555 78.1 ? 32 OP2 ? A DG 2 ? A DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? N HOH . ? A HOH 212 ? 1_455 26.2 ? 33 OP2 ? A DG 2 ? A DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? N HOH . ? A HOH 228 ? 1_455 25.2 ? 34 O ? N HOH . ? A HOH 212 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 O ? N HOH . ? A HOH 228 ? 1_455 7.4 ? 35 OP2 ? A DG 2 ? A DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 OP1 ? C DG 2 ? C DG 2 ? 1_555 20.2 ? 36 O ? N HOH . ? A HOH 212 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 OP1 ? C DG 2 ? C DG 2 ? 1_555 6.1 ? 37 O ? N HOH . ? A HOH 228 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 OP1 ? C DG 2 ? C DG 2 ? 1_555 9.2 ? 38 OP2 ? A DG 2 ? A DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 218 ? 1_555 27.1 ? 39 O ? N HOH . ? A HOH 212 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 218 ? 1_555 0.9 ? 40 O ? N HOH . ? A HOH 228 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 218 ? 1_555 8.0 ? 41 OP1 ? C DG 2 ? C DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 218 ? 1_555 6.9 ? 42 OP2 ? A DG 2 ? A DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 220 ? 1_555 23.0 ? 43 O ? N HOH . ? A HOH 212 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 220 ? 1_555 5.8 ? 44 O ? N HOH . ? A HOH 228 ? 1_455 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 220 ? 1_555 3.1 ? 45 OP1 ? C DG 2 ? C DG 2 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 220 ? 1_555 6.2 ? 46 O ? P HOH . ? C HOH 218 ? 1_555 CA ? L CA . ? C CA 102 ? 1_655 O ? P HOH . ? C HOH 220 ? 1_555 6.7 ? 47 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 O ? J 2OP . ? B 2OP 103 ? 1_555 91.8 ? 48 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 OHN ? J 2OP . ? B 2OP 103 ? 1_555 103.4 ? 49 O ? J 2OP . ? B 2OP 103 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 OHN ? J 2OP . ? B 2OP 103 ? 1_555 76.0 ? 50 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 N7 ? C DG 2 ? C DG 2 ? 1_555 157.3 ? 51 O ? J 2OP . ? B 2OP 103 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 N7 ? C DG 2 ? C DG 2 ? 1_555 89.9 ? 52 OHN ? J 2OP . ? B 2OP 103 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 N7 ? C DG 2 ? C DG 2 ? 1_555 99.0 ? 53 N7 ? B DG 2 ? B DG 2 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 O1 ? M SIN . ? D SIN 101 ? 1_555 89.7 ? 54 O ? J 2OP . ? B 2OP 103 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 O1 ? M SIN . ? D SIN 101 ? 1_555 173.2 ? 55 OHN ? J 2OP . ? B 2OP 103 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 O1 ? M SIN . ? D SIN 101 ? 1_555 110.2 ? 56 N7 ? C DG 2 ? C DG 2 ? 1_555 CU ? H CU . ? B CU 101 ? 1_555 O1 ? M SIN . ? D SIN 101 ? 1_555 86.2 ? 57 OP1 B B DC 5 ? B DC 5 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 N7 ? B DG 6 ? B DG 6 ? 1_555 91.2 ? 58 OP1 B B DC 5 ? B DC 5 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 201 ? 1_555 58.6 ? 59 N7 ? B DG 6 ? B DG 6 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 201 ? 1_555 104.8 ? 60 OP1 B B DC 5 ? B DC 5 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 208 ? 1_555 138.7 ? 61 N7 ? B DG 6 ? B DG 6 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 208 ? 1_555 88.7 ? 62 O ? O HOH . ? B HOH 201 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 208 ? 1_555 158.9 ? 63 OP1 B B DC 5 ? B DC 5 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 209 ? 1_555 64.3 ? 64 N7 ? B DG 6 ? B DG 6 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 209 ? 1_555 116.5 ? 65 O ? O HOH . ? B HOH 201 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 209 ? 1_555 108.2 ? 66 O ? O HOH . ? B HOH 208 ? 1_555 CU ? I CU . ? B CU 102 ? 1_555 O ? O HOH . ? B HOH 209 ? 1_555 79.0 ? 67 O ? O HOH . ? B HOH 208 ? 2_555 CU ? K CU . ? C CU 101 ? 1_555 N7 ? C DG 4 ? C DG 4 ? 1_555 87.2 ? 68 O ? O HOH . ? B HOH 208 ? 2_555 CU ? K CU . ? C CU 101 ? 1_555 O ? P HOH . ? C HOH 219 ? 1_555 88.8 ? 69 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 O ? P HOH . ? C HOH 219 ? 1_555 94.2 ? 70 O ? O HOH . ? B HOH 208 ? 2_555 CU ? K CU . ? C CU 101 ? 1_555 N7 ? D DG 6 ? D DG 6 ? 1_555 139.9 ? 71 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 N7 ? D DG 6 ? D DG 6 ? 1_555 53.2 ? 72 O ? P HOH . ? C HOH 219 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 N7 ? D DG 6 ? D DG 6 ? 1_555 88.5 ? 73 O ? O HOH . ? B HOH 208 ? 2_555 CU ? K CU . ? C CU 101 ? 1_555 O ? Q HOH . ? D HOH 212 ? 2_455 175.8 ? 74 N7 ? C DG 4 ? C DG 4 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 O ? Q HOH . ? D HOH 212 ? 2_455 93.2 ? 75 O ? P HOH . ? C HOH 219 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 O ? Q HOH . ? D HOH 212 ? 2_455 87.0 ? 76 N7 ? D DG 6 ? D DG 6 ? 1_555 CU ? K CU . ? C CU 101 ? 1_555 O ? Q HOH . ? D HOH 212 ? 2_455 40.0 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CU 101 ? 4 'binding site for residue CU A 101' AC2 Software A CA 102 ? 3 'binding site for residue CA A 102' AC3 Software A 2OP 103 ? 7 'binding site for residue 2OP A 103' AC4 Software B CU 101 ? 4 'binding site for residue CU B 101' AC5 Software B CU 102 ? 6 'binding site for residue CU B 102' AC6 Software B 2OP 103 ? 8 'binding site for residue 2OP B 103' AC7 Software C CU 101 ? 2 'binding site for residue CU C 101' AC8 Software C CA 102 ? 6 'binding site for residue CA C 102' AC9 Software D SIN 101 ? 13 'binding site for residue SIN D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 DG A 2 ? DG A 2 . ? 1_555 ? 2 AC1 4 2OP G . ? 2OP A 103 . ? 1_555 ? 3 AC1 4 DG D 2 ? DG D 2 . ? 1_555 ? 4 AC1 4 SIN M . ? SIN D 101 . ? 1_555 ? 5 AC2 3 DG A 2 ? DG A 2 . ? 1_555 ? 6 AC2 3 HOH N . ? HOH A 222 . ? 1_555 ? 7 AC2 3 DG C 2 ? DG C 2 . ? 1_655 ? 8 AC3 7 DG A 2 ? DG A 2 . ? 1_555 ? 9 AC3 7 CU E . ? CU A 101 . ? 1_555 ? 10 AC3 7 HOH N . ? HOH A 207 . ? 1_555 ? 11 AC3 7 HOH N . ? HOH A 220 . ? 1_555 ? 12 AC3 7 DC D 1 ? DC D 1 . ? 1_555 ? 13 AC3 7 DG D 2 ? DG D 2 . ? 1_555 ? 14 AC3 7 SIN M . ? SIN D 101 . ? 1_555 ? 15 AC4 4 DG B 2 ? DG B 2 . ? 1_555 ? 16 AC4 4 2OP J . ? 2OP B 103 . ? 1_555 ? 17 AC4 4 DG C 2 ? DG C 2 . ? 1_555 ? 18 AC4 4 SIN M . ? SIN D 101 . ? 1_555 ? 19 AC5 6 DC B 5 ? DC B 5 . ? 1_555 ? 20 AC5 6 DG B 6 ? DG B 6 . ? 1_555 ? 21 AC5 6 HOH O . ? HOH B 201 . ? 1_555 ? 22 AC5 6 HOH O . ? HOH B 208 . ? 1_555 ? 23 AC5 6 HOH O . ? HOH B 209 . ? 1_555 ? 24 AC5 6 DG D 6 ? DG D 6 . ? 1_655 ? 25 AC6 8 DC B 1 ? DC B 1 . ? 1_555 ? 26 AC6 8 DG B 2 ? DG B 2 . ? 1_555 ? 27 AC6 8 CU H . ? CU B 101 . ? 1_555 ? 28 AC6 8 HOH O . ? HOH B 207 . ? 1_555 ? 29 AC6 8 HOH O . ? HOH B 220 . ? 1_555 ? 30 AC6 8 DC C 1 ? DC C 1 . ? 1_555 ? 31 AC6 8 DG C 2 ? DG C 2 . ? 1_555 ? 32 AC6 8 SIN M . ? SIN D 101 . ? 1_555 ? 33 AC7 2 DG C 4 ? DG C 4 . ? 1_555 ? 34 AC7 2 HOH P . ? HOH C 219 . ? 1_555 ? 35 AC8 6 DG A 2 ? DG A 2 . ? 1_455 ? 36 AC8 6 HOH N . ? HOH A 212 . ? 1_455 ? 37 AC8 6 HOH N . ? HOH A 228 . ? 1_455 ? 38 AC8 6 DG C 2 ? DG C 2 . ? 1_555 ? 39 AC8 6 HOH P . ? HOH C 218 . ? 1_555 ? 40 AC8 6 HOH P . ? HOH C 220 . ? 1_555 ? 41 AC9 13 DG A 2 ? DG A 2 . ? 1_555 ? 42 AC9 13 DC A 3 ? DC A 3 . ? 1_555 ? 43 AC9 13 CU E . ? CU A 101 . ? 1_555 ? 44 AC9 13 2OP G . ? 2OP A 103 . ? 1_555 ? 45 AC9 13 DG B 2 ? DG B 2 . ? 1_555 ? 46 AC9 13 DC B 3 ? DC B 3 . ? 1_555 ? 47 AC9 13 CU H . ? CU B 101 . ? 1_555 ? 48 AC9 13 2OP J . ? 2OP B 103 . ? 1_555 ? 49 AC9 13 DG C 2 ? DG C 2 . ? 1_555 ? 50 AC9 13 DC C 3 ? DC C 3 . ? 1_555 ? 51 AC9 13 DG D 2 ? DG D 2 . ? 1_555 ? 52 AC9 13 DC D 3 ? DC D 3 . ? 1_555 ? 53 AC9 13 HOH Q . ? HOH D 214 . ? 1_555 ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 226 ? ? 1_555 O C HOH 208 ? ? 2_445 2.14 2 1 O A HOH 235 ? ? 1_555 O D HOH 226 ? ? 1_656 2.16 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2OP C C N N 1 2OP O O N N 2 2OP CB C N N 3 2OP OHN O N N 4 2OP CA C N S 5 2OP OXT O N N 6 2OP HB1 H N N 7 2OP HB2 H N N 8 2OP HB3 H N N 9 2OP H H N N 10 2OP HA H N N 11 2OP HXT H N N 12 CA CA CA N N 13 CU CU CU N N 14 DC OP3 O N N 15 DC P P N N 16 DC OP1 O N N 17 DC OP2 O N N 18 DC "O5'" O N N 19 DC "C5'" C N N 20 DC "C4'" C N R 21 DC "O4'" O N N 22 DC "C3'" C N S 23 DC "O3'" O N N 24 DC "C2'" C N N 25 DC "C1'" C N R 26 DC N1 N N N 27 DC C2 C N N 28 DC O2 O N N 29 DC N3 N N N 30 DC C4 C N N 31 DC N4 N N N 32 DC C5 C N N 33 DC C6 C N N 34 DC HOP3 H N N 35 DC HOP2 H N N 36 DC "H5'" H N N 37 DC "H5''" H N N 38 DC "H4'" H N N 39 DC "H3'" H N N 40 DC "HO3'" H N N 41 DC "H2'" H N N 42 DC "H2''" H N N 43 DC "H1'" H N N 44 DC H41 H N N 45 DC H42 H N N 46 DC H5 H N N 47 DC H6 H N N 48 DG OP3 O N N 49 DG P P N N 50 DG OP1 O N N 51 DG OP2 O N N 52 DG "O5'" O N N 53 DG "C5'" C N N 54 DG "C4'" C N R 55 DG "O4'" O N N 56 DG "C3'" C N S 57 DG "O3'" O N N 58 DG "C2'" C N N 59 DG "C1'" C N R 60 DG N9 N Y N 61 DG C8 C Y N 62 DG N7 N Y N 63 DG C5 C Y N 64 DG C6 C N N 65 DG O6 O N N 66 DG N1 N N N 67 DG C2 C N N 68 DG N2 N N N 69 DG N3 N N N 70 DG C4 C Y N 71 DG HOP3 H N N 72 DG HOP2 H N N 73 DG "H5'" H N N 74 DG "H5''" H N N 75 DG "H4'" H N N 76 DG "H3'" H N N 77 DG "HO3'" H N N 78 DG "H2'" H N N 79 DG "H2''" H N N 80 DG "H1'" H N N 81 DG H8 H N N 82 DG H1 H N N 83 DG H21 H N N 84 DG H22 H N N 85 HOH O O N N 86 HOH H1 H N N 87 HOH H2 H N N 88 SIN C1 C N N 89 SIN O1 O N N 90 SIN O2 O N N 91 SIN C2 C N N 92 SIN C3 C N N 93 SIN C4 C N N 94 SIN O3 O N N 95 SIN O4 O N N 96 SIN HO2 H N N 97 SIN H21 H N N 98 SIN H22 H N N 99 SIN H31 H N N 100 SIN H32 H N N 101 SIN HO4 H N N 102 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2OP C O doub N N 1 2OP C CA sing N N 2 2OP CB CA sing N N 3 2OP CB HB1 sing N N 4 2OP CB HB2 sing N N 5 2OP CB HB3 sing N N 6 2OP OHN CA sing N N 7 2OP C OXT sing N N 8 2OP OHN H sing N N 9 2OP CA HA sing N N 10 2OP OXT HXT sing N N 11 DC OP3 P sing N N 12 DC OP3 HOP3 sing N N 13 DC P OP1 doub N N 14 DC P OP2 sing N N 15 DC P "O5'" sing N N 16 DC OP2 HOP2 sing N N 17 DC "O5'" "C5'" sing N N 18 DC "C5'" "C4'" sing N N 19 DC "C5'" "H5'" sing N N 20 DC "C5'" "H5''" sing N N 21 DC "C4'" "O4'" sing N N 22 DC "C4'" "C3'" sing N N 23 DC "C4'" "H4'" sing N N 24 DC "O4'" "C1'" sing N N 25 DC "C3'" "O3'" sing N N 26 DC "C3'" "C2'" sing N N 27 DC "C3'" "H3'" sing N N 28 DC "O3'" "HO3'" sing N N 29 DC "C2'" "C1'" sing N N 30 DC "C2'" "H2'" sing N N 31 DC "C2'" "H2''" sing N N 32 DC "C1'" N1 sing N N 33 DC "C1'" "H1'" sing N N 34 DC N1 C2 sing N N 35 DC N1 C6 sing N N 36 DC C2 O2 doub N N 37 DC C2 N3 sing N N 38 DC N3 C4 doub N N 39 DC C4 N4 sing N N 40 DC C4 C5 sing N N 41 DC N4 H41 sing N N 42 DC N4 H42 sing N N 43 DC C5 C6 doub N N 44 DC C5 H5 sing N N 45 DC C6 H6 sing N N 46 DG OP3 P sing N N 47 DG OP3 HOP3 sing N N 48 DG P OP1 doub N N 49 DG P OP2 sing N N 50 DG P "O5'" sing N N 51 DG OP2 HOP2 sing N N 52 DG "O5'" "C5'" sing N N 53 DG "C5'" "C4'" sing N N 54 DG "C5'" "H5'" sing N N 55 DG "C5'" "H5''" sing N N 56 DG "C4'" "O4'" sing N N 57 DG "C4'" "C3'" sing N N 58 DG "C4'" "H4'" sing N N 59 DG "O4'" "C1'" sing N N 60 DG "C3'" "O3'" sing N N 61 DG "C3'" "C2'" sing N N 62 DG "C3'" "H3'" sing N N 63 DG "O3'" "HO3'" sing N N 64 DG "C2'" "C1'" sing N N 65 DG "C2'" "H2'" sing N N 66 DG "C2'" "H2''" sing N N 67 DG "C1'" N9 sing N N 68 DG "C1'" "H1'" sing N N 69 DG N9 C8 sing Y N 70 DG N9 C4 sing Y N 71 DG C8 N7 doub Y N 72 DG C8 H8 sing N N 73 DG N7 C5 sing Y N 74 DG C5 C6 sing N N 75 DG C5 C4 doub Y N 76 DG C6 O6 doub N N 77 DG C6 N1 sing N N 78 DG N1 C2 sing N N 79 DG N1 H1 sing N N 80 DG C2 N2 sing N N 81 DG C2 N3 doub N N 82 DG N2 H21 sing N N 83 DG N2 H22 sing N N 84 DG N3 C4 sing N N 85 HOH O H1 sing N N 86 HOH O H2 sing N N 87 SIN C1 O1 doub N N 88 SIN C1 O2 sing N N 89 SIN C1 C2 sing N N 90 SIN O2 HO2 sing N N 91 SIN C2 C3 sing N N 92 SIN C2 H21 sing N N 93 SIN C2 H22 sing N N 94 SIN C3 C4 sing N N 95 SIN C3 H31 sing N N 96 SIN C3 H32 sing N N 97 SIN C4 O3 doub N N 98 SIN C4 O4 sing N N 99 SIN O4 HO4 sing N N 100 # _ndb_struct_conf_na.entry_id 5IHD _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -0.330 -0.142 -0.011 6.660 -3.425 0.945 1 A_DC1:DG6_B A 1 ? B 6 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 0.284 -0.162 0.143 -4.361 1.979 1.423 2 A_DG2:DC5_B A 2 ? B 5 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.091 -0.023 0.018 4.671 -1.992 1.657 3 A_DC3:DG4_B A 3 ? B 4 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.219 -0.109 0.212 -1.531 -6.347 0.764 4 A_DG4:DC3_B A 4 ? B 3 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 -0.207 -0.133 -0.179 2.255 -2.760 1.547 5 A_DC5:DG2_B A 5 ? B 2 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 0.208 -0.060 0.406 14.648 -7.958 -0.300 6 A_DG6:DC1_B A 6 ? B 1 ? 19 1 1 C DC 1 1_555 D DG 6 1_555 -0.154 -0.136 -0.116 -0.383 0.314 1.632 7 C_DC1:DG6_D C 1 ? D 6 ? 19 1 1 C DG 2 1_555 D DC 5 1_555 0.295 -0.156 0.105 3.232 1.334 1.635 8 C_DG2:DC5_D C 2 ? D 5 ? 19 1 1 C DC 3 1_555 D DG 4 1_555 -0.155 -0.096 -0.028 11.134 -2.278 1.524 9 C_DC3:DG4_D C 3 ? D 4 ? 19 1 1 C DG 4 1_555 D DC 3 1_555 0.258 -0.166 0.018 -1.192 -12.007 -0.965 10 C_DG4:DC3_D C 4 ? D 3 ? 19 1 1 C DC 5 1_555 D DG 2 1_555 -0.326 -0.073 -0.221 0.343 -8.357 -0.056 11 C_DC5:DG2_D C 5 ? D 2 ? 19 1 1 C DG 6 1_555 D DC 1 1_555 0.200 -0.158 0.221 4.128 3.181 0.627 12 C_DG6:DC1_D C 6 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 0.135 5.394 3.807 1.964 -3.722 -9.010 -20.668 6.293 5.439 22.170 11.698 -9.942 1 AA_DC1DG2:DC5DG6_BB A 1 ? B 6 ? A 2 ? B 5 ? 1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.211 -1.441 3.211 2.127 -6.686 -46.882 2.310 -0.099 2.997 8.348 2.656 -47.375 2 AA_DG2DC3:DG4DC5_BB A 2 ? B 5 ? A 3 ? B 4 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.210 5.427 3.694 -1.324 -3.096 -6.919 -26.000 -7.741 5.468 23.878 -10.210 -7.693 3 AA_DC3DG4:DC3DG4_BB A 3 ? B 4 ? A 4 ? B 3 ? 1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 0.165 -2.180 3.409 3.760 -5.537 -43.178 3.462 0.583 3.095 7.470 5.073 -43.669 4 AA_DG4DC5:DG2DC3_BB A 4 ? B 3 ? A 5 ? B 2 ? 1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 -0.471 5.208 3.229 -0.077 0.236 -12.419 -24.348 -2.266 3.127 -1.092 -0.358 -12.421 5 AA_DC5DG6:DC1DG2_BB A 5 ? B 2 ? A 6 ? B 1 ? 1 C DC 1 1_555 D DG 6 1_555 C DG 2 1_555 D DC 5 1_555 0.100 5.248 3.346 1.589 -4.928 -7.889 -16.601 5.540 5.519 31.710 10.222 -9.435 6 CC_DC1DG2:DC5DG6_DD C 1 ? D 6 ? C 2 ? D 5 ? 1 C DG 2 1_555 D DC 5 1_555 C DC 3 1_555 D DG 4 1_555 -0.313 -1.159 3.284 -0.314 -5.662 -46.653 1.913 -0.418 3.129 7.118 -0.394 -46.978 7 CC_DG2DC3:DG4DC5_DD C 2 ? D 5 ? C 3 ? D 4 ? 1 C DC 3 1_555 D DG 4 1_555 C DG 4 1_555 D DC 3 1_555 -0.516 5.388 3.740 -0.638 -5.293 -6.306 -12.185 -6.632 6.268 39.960 -4.820 -8.256 8 CC_DC3DG4:DC3DG4_DD C 3 ? D 4 ? C 4 ? D 3 ? 1 C DG 4 1_555 D DC 3 1_555 C DC 5 1_555 D DG 2 1_555 0.043 -2.243 3.517 2.705 -7.850 -44.319 3.646 0.304 3.089 10.299 3.549 -45.052 9 CC_DG4DC5:DG2DC3_DD C 4 ? D 3 ? C 5 ? D 2 ? 1 C DC 5 1_555 D DG 2 1_555 C DG 6 1_555 D DC 1 1_555 0.246 5.258 3.487 1.919 -2.183 -13.020 -19.900 3.464 4.225 9.472 8.328 -13.339 10 CC_DC5DG6:DC1DG2_DD C 5 ? D 2 ? C 6 ? D 1 ? # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number 200220-100752 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2DCG _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5IHD _atom_sites.fract_transf_matrix[1][1] 0.036381 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011471 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028109 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.033776 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CU N O P # loop_