HEADER LYASE 04-MAR-16 5ILD TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH MES BUFFER MOLECULE AND MG2+ TITLE 2 IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, MES, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5ILD 1 REMARK REVDAT 1 08-MAR-17 5ILD 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 57165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.490 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.1683 - 5.1067 0.97 4134 150 0.1434 0.1523 REMARK 3 2 5.1067 - 4.0544 0.99 4001 143 0.1358 0.1616 REMARK 3 3 4.0544 - 3.5422 0.99 3946 144 0.1527 0.1880 REMARK 3 4 3.5422 - 3.2185 0.99 3955 143 0.1796 0.2069 REMARK 3 5 3.2185 - 2.9879 1.00 3941 144 0.1932 0.2317 REMARK 3 6 2.9879 - 2.8117 1.00 3933 137 0.2009 0.2593 REMARK 3 7 2.8117 - 2.6709 1.00 3926 147 0.1942 0.2063 REMARK 3 8 2.6709 - 2.5547 1.00 3927 139 0.1946 0.2283 REMARK 3 9 2.5547 - 2.4564 1.00 3897 140 0.1898 0.1926 REMARK 3 10 2.4564 - 2.3716 1.00 3920 140 0.2022 0.2658 REMARK 3 11 2.3716 - 2.2975 1.00 3902 145 0.2136 0.2558 REMARK 3 12 2.2975 - 2.2318 1.00 3909 141 0.2453 0.2676 REMARK 3 13 2.2318 - 2.1730 1.00 3908 147 0.2513 0.3219 REMARK 3 14 2.1730 - 2.1200 1.00 3869 137 0.2703 0.2809 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4483 REMARK 3 ANGLE : 0.934 6079 REMARK 3 CHIRALITY : 0.036 683 REMARK 3 PLANARITY : 0.004 767 REMARK 3 DIHEDRAL : 15.228 1664 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0073 55.8367 23.8989 REMARK 3 T TENSOR REMARK 3 T11: 0.4765 T22: 0.2795 REMARK 3 T33: 0.4487 T12: -0.0621 REMARK 3 T13: -0.0246 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.3521 L22: 4.2507 REMARK 3 L33: 1.5857 L12: 0.1191 REMARK 3 L13: -0.2557 L23: 0.3403 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: -0.2788 S13: -0.1402 REMARK 3 S21: 0.5004 S22: 0.0080 S23: 0.3889 REMARK 3 S31: 0.1019 S32: -0.1631 S33: -0.0340 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.7166 64.0467 16.4144 REMARK 3 T TENSOR REMARK 3 T11: 0.3871 T22: 0.4222 REMARK 3 T33: 0.7122 T12: -0.0228 REMARK 3 T13: -0.1010 T23: -0.0961 REMARK 3 L TENSOR REMARK 3 L11: 6.2099 L22: 3.8070 REMARK 3 L33: 4.6662 L12: -0.6791 REMARK 3 L13: -4.0038 L23: 2.9496 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: -0.4821 S13: -0.1142 REMARK 3 S21: -0.0209 S22: 0.3358 S23: -1.1240 REMARK 3 S31: -0.1712 S32: 1.0760 S33: -0.3621 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6483 59.9707 9.3508 REMARK 3 T TENSOR REMARK 3 T11: 0.2751 T22: 0.2633 REMARK 3 T33: 0.3832 T12: -0.0306 REMARK 3 T13: -0.0226 T23: -0.0715 REMARK 3 L TENSOR REMARK 3 L11: 3.1305 L22: 1.4712 REMARK 3 L33: 2.5529 L12: -0.5634 REMARK 3 L13: -0.8820 L23: 0.2394 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: 0.2244 S13: -0.1042 REMARK 3 S21: -0.0586 S22: 0.0914 S23: -0.3581 REMARK 3 S31: -0.0229 S32: 0.1258 S33: -0.0326 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9489 66.6912 20.1205 REMARK 3 T TENSOR REMARK 3 T11: 0.3707 T22: 0.3451 REMARK 3 T33: 0.6726 T12: -0.0413 REMARK 3 T13: 0.0031 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 2.8508 L22: 4.2007 REMARK 3 L33: 1.1284 L12: 0.2153 REMARK 3 L13: 0.0454 L23: 0.9014 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -0.0224 S13: 0.3269 REMARK 3 S21: -0.0386 S22: -0.2156 S23: 1.1968 REMARK 3 S31: -0.0457 S32: -0.3582 S33: 0.1538 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6285 87.1356 23.3288 REMARK 3 T TENSOR REMARK 3 T11: 0.4649 T22: 0.4157 REMARK 3 T33: 1.1628 T12: 0.0525 REMARK 3 T13: 0.0452 T23: -0.1594 REMARK 3 L TENSOR REMARK 3 L11: 1.7656 L22: 3.0608 REMARK 3 L33: 1.3793 L12: 0.5403 REMARK 3 L13: -0.0856 L23: -0.2167 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: -0.2260 S13: 0.7084 REMARK 3 S21: 0.1903 S22: -0.0252 S23: 1.3045 REMARK 3 S31: -0.1430 S32: -0.3612 S33: -0.0235 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 519 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1822 81.0801 16.7439 REMARK 3 T TENSOR REMARK 3 T11: 0.3603 T22: 0.2397 REMARK 3 T33: 0.5156 T12: 0.0091 REMARK 3 T13: -0.0499 T23: -0.0838 REMARK 3 L TENSOR REMARK 3 L11: 2.6991 L22: 5.7374 REMARK 3 L33: 3.5023 L12: 0.2281 REMARK 3 L13: -0.4570 L23: -1.3188 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: 0.1236 S13: 0.4462 REMARK 3 S21: -0.3323 S22: -0.0681 S23: 0.2366 REMARK 3 S31: -0.2648 S32: -0.0983 S33: -0.0359 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 520 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6305 64.0930 8.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.4770 T22: 0.4087 REMARK 3 T33: 0.5229 T12: -0.0278 REMARK 3 T13: -0.0954 T23: -0.1277 REMARK 3 L TENSOR REMARK 3 L11: 9.1339 L22: 6.9695 REMARK 3 L33: 8.4321 L12: 3.1033 REMARK 3 L13: -1.0625 L23: -6.6631 REMARK 3 S TENSOR REMARK 3 S11: -0.1959 S12: 0.6985 S13: 0.5285 REMARK 3 S21: -0.5924 S22: 0.1590 S23: 0.7839 REMARK 3 S31: -0.2446 S32: -0.0791 S33: -0.0307 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ILD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57249 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 42.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.08166 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.53870 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.360 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPSO, PH 7, 100 MM MG ACETATE, REMARK 280 10% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.59500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.45500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.45500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.79750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.45500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.45500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.39250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.45500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.45500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.79750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.45500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.45500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.39250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.59500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 883 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 889 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 19 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 841 O HOH A 870 1.93 REMARK 500 O ASN A 100 O HOH A 701 1.95 REMARK 500 O HOH A 725 O HOH A 871 1.99 REMARK 500 O HOH A 839 O HOH A 865 2.01 REMARK 500 O HOH A 713 O HOH A 866 2.07 REMARK 500 O SER A 23 O HOH A 702 2.08 REMARK 500 O HOH A 875 O HOH A 893 2.09 REMARK 500 O HOH A 712 O HOH A 868 2.12 REMARK 500 OD2 ASP A 66 O HOH A 703 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 83.62 56.69 REMARK 500 ASN A 100 76.89 -109.90 REMARK 500 CYS A 101 41.44 -165.84 REMARK 500 ALA A 306 24.92 -142.42 REMARK 500 TYR A 307 -53.66 -154.51 REMARK 500 TRP A 323 71.16 50.94 REMARK 500 ALA A 459 33.77 -99.41 REMARK 500 HIS A 529 74.88 -118.27 REMARK 500 VAL A 543 -60.00 -109.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 HOH A 711 O 61.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD2 REMARK 620 2 THR A 448 OG1 108.8 REMARK 620 3 GLU A 452 OE2 151.1 80.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 603 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5ILZ RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5ILD A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5ILD GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5ILD SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET MG A 601 1 HET MG A 602 1 HET MES A 603 24 HETNAM MG MAGNESIUM ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 2 MG 2(MG 2+) FORMUL 4 MES C6 H13 N O4 S FORMUL 5 HOH *196(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 253 1 32 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 LEU A 399 1 10 HELIX 27 AC9 ALA A 400 THR A 402 5 3 HELIX 28 AD1 THR A 403 TYR A 412 1 10 HELIX 29 AD2 THR A 419 SER A 427 1 9 HELIX 30 AD3 PRO A 430 THR A 448 1 19 HELIX 31 AD4 THR A 448 ARG A 455 1 8 HELIX 32 AD5 THR A 460 GLY A 470 1 11 HELIX 33 AD6 SER A 472 LEU A 495 1 24 HELIX 34 AD7 SER A 502 PHE A 505 5 4 HELIX 35 AD8 LEU A 506 TYR A 520 1 15 HELIX 36 AD9 ILE A 521 LEU A 524 5 4 HELIX 37 AE1 VAL A 533 VAL A 543 1 11 LINK OD1 ASP A 301 MG MG A 602 1555 1555 2.08 LINK OD2 ASP A 444 MG MG A 601 1555 1555 2.19 LINK OG1 THR A 448 MG MG A 601 1555 1555 2.20 LINK OE2 GLU A 452 MG MG A 601 1555 1555 2.53 LINK MG MG A 602 O HOH A 711 1555 1555 2.47 CISPEP 1 SER A 184 PRO A 185 0 3.37 CISPEP 2 ARG A 497 PRO A 498 0 -8.35 SITE 1 AC1 4 ASP A 444 ASP A 445 THR A 448 GLU A 452 SITE 1 AC2 4 ASP A 301 ASP A 305 MES A 603 HOH A 711 SITE 1 AC3 9 ARG A 264 TRP A 273 ILE A 294 ASP A 301 SITE 2 AC3 9 THR A 402 THR A 403 ASP A 444 TYR A 527 SITE 3 AC3 9 MG A 602 CRYST1 126.910 126.910 123.190 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007880 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007880 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008118 0.00000