HEADER LYASE 04-MAR-16 5ILH TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH CAPSO BUFFER MOLECULE AND TITLE 2 CA2+ IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, CAPSO, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5ILH 1 LINK REVDAT 1 08-MAR-17 5ILH 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 58059 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1494 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6568 - 4.6687 1.00 5490 148 0.1456 0.1900 REMARK 3 2 4.6687 - 3.7063 0.98 5191 139 0.1434 0.1684 REMARK 3 3 3.7063 - 3.2380 0.99 5155 132 0.1753 0.1998 REMARK 3 4 3.2380 - 2.9420 0.99 5126 133 0.1928 0.2147 REMARK 3 5 2.9420 - 2.7311 0.99 5105 138 0.2041 0.2392 REMARK 3 6 2.7311 - 2.5701 0.99 5072 137 0.2017 0.2355 REMARK 3 7 2.5701 - 2.4414 0.99 5105 132 0.2050 0.2811 REMARK 3 8 2.4414 - 2.3352 0.99 5068 133 0.2237 0.2648 REMARK 3 9 2.3352 - 2.2453 0.99 5107 127 0.2474 0.2767 REMARK 3 10 2.2453 - 2.1678 0.99 5086 140 0.2782 0.2876 REMARK 3 11 2.1678 - 2.1000 1.00 5060 135 0.3036 0.3497 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4532 REMARK 3 ANGLE : 0.896 6150 REMARK 3 CHIRALITY : 0.034 694 REMARK 3 PLANARITY : 0.004 777 REMARK 3 DIHEDRAL : 14.064 1683 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7025 55.5731 23.8949 REMARK 3 T TENSOR REMARK 3 T11: 0.4184 T22: 0.3061 REMARK 3 T33: 0.2743 T12: -0.0297 REMARK 3 T13: -0.0776 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.5911 L22: 3.6091 REMARK 3 L33: 0.9529 L12: 0.0716 REMARK 3 L13: -0.4207 L23: 0.4980 REMARK 3 S TENSOR REMARK 3 S11: -0.0514 S12: -0.2402 S13: -0.0427 REMARK 3 S21: 0.4023 S22: 0.0682 S23: 0.2084 REMARK 3 S31: 0.0871 S32: -0.1024 S33: -0.0325 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.4429 63.8189 16.3506 REMARK 3 T TENSOR REMARK 3 T11: 0.3136 T22: 0.3402 REMARK 3 T33: 0.5522 T12: 0.0218 REMARK 3 T13: -0.1252 T23: -0.0764 REMARK 3 L TENSOR REMARK 3 L11: 6.7123 L22: 3.0642 REMARK 3 L33: 7.0835 L12: -0.2404 REMARK 3 L13: -3.9590 L23: 3.1240 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.2292 S13: -0.0050 REMARK 3 S21: 0.0874 S22: 0.3651 S23: -1.0175 REMARK 3 S31: 0.0059 S32: 0.7769 S33: -0.2976 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3215 59.5956 9.3756 REMARK 3 T TENSOR REMARK 3 T11: 0.2413 T22: 0.2495 REMARK 3 T33: 0.2203 T12: -0.0081 REMARK 3 T13: -0.0554 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 3.1191 L22: 1.8174 REMARK 3 L33: 2.0411 L12: -0.4317 REMARK 3 L13: -1.0958 L23: -0.1376 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.1591 S13: 0.0208 REMARK 3 S21: -0.0534 S22: 0.0395 S23: -0.4106 REMARK 3 S31: -0.0225 S32: 0.0375 S33: -0.0147 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7052 66.2208 20.1809 REMARK 3 T TENSOR REMARK 3 T11: 0.2724 T22: 0.3200 REMARK 3 T33: 0.3930 T12: -0.0434 REMARK 3 T13: -0.0394 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 2.8775 L22: 4.0388 REMARK 3 L33: 0.8450 L12: -1.0059 REMARK 3 L13: 0.2832 L23: 0.6686 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.0633 S13: 0.2075 REMARK 3 S21: -0.1114 S22: -0.1458 S23: 0.9431 REMARK 3 S31: -0.0031 S32: -0.2505 S33: 0.1037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4548 86.6571 23.2089 REMARK 3 T TENSOR REMARK 3 T11: 0.3388 T22: 0.3619 REMARK 3 T33: 0.7828 T12: 0.0445 REMARK 3 T13: -0.0489 T23: -0.1489 REMARK 3 L TENSOR REMARK 3 L11: 1.6666 L22: 2.0579 REMARK 3 L33: 1.1933 L12: -0.0621 REMARK 3 L13: 0.0411 L23: 0.0319 REMARK 3 S TENSOR REMARK 3 S11: 0.0059 S12: -0.2182 S13: 0.5415 REMARK 3 S21: 0.1049 S22: -0.0262 S23: 1.0115 REMARK 3 S31: -0.1345 S32: -0.3119 S33: -0.0026 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 519 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9442 80.5872 16.5990 REMARK 3 T TENSOR REMARK 3 T11: 0.3117 T22: 0.2323 REMARK 3 T33: 0.3197 T12: 0.0234 REMARK 3 T13: -0.1096 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 2.4632 L22: 4.0077 REMARK 3 L33: 2.3654 L12: 0.3809 REMARK 3 L13: -0.5182 L23: -0.7804 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: 0.1068 S13: 0.3646 REMARK 3 S21: -0.3474 S22: 0.0033 S23: 0.2027 REMARK 3 S31: -0.1750 S32: -0.1236 S33: 0.0261 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 520 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3111 65.1750 8.0787 REMARK 3 T TENSOR REMARK 3 T11: 0.4459 T22: 0.4106 REMARK 3 T33: 0.3714 T12: 0.0035 REMARK 3 T13: -0.1820 T23: -0.0829 REMARK 3 L TENSOR REMARK 3 L11: 6.3861 L22: 7.9587 REMARK 3 L33: 4.7032 L12: 2.9777 REMARK 3 L13: 0.0668 L23: -1.4629 REMARK 3 S TENSOR REMARK 3 S11: -0.2841 S12: 0.7344 S13: 0.4135 REMARK 3 S21: -1.2306 S22: 0.1404 S23: 0.7106 REMARK 3 S31: -0.2111 S32: -0.0381 S33: 0.0672 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ILH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58598 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.27280 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 1.20100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CAPSO, PH 8.5, 100 MM CA REMARK 280 ACETATE, 10% PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.63500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.14000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.14000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.81750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.14000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.14000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.45250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.14000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.14000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.81750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.14000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.14000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.45250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.63500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 900 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 911 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 888 O HOH A 890 1.94 REMARK 500 OD2 ASP A 143 O HOH A 701 1.99 REMARK 500 ND2 ASN A 120 O HOH A 702 2.01 REMARK 500 OAA 3CX A 604 O HOH A 703 2.09 REMARK 500 OAA 3FX A 603 O HOH A 703 2.09 REMARK 500 O HOH A 848 O HOH A 854 2.10 REMARK 500 O SER A 248 O HOH A 704 2.13 REMARK 500 OG1 THR A 259 O HOH A 705 2.14 REMARK 500 OE2 GLU A 393 O HOH A 706 2.16 REMARK 500 O HOH A 795 O HOH A 903 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 71.64 50.64 REMARK 500 CYS A 101 26.45 -158.65 REMARK 500 ALA A 306 29.82 -148.19 REMARK 500 TYR A 307 -55.63 -158.18 REMARK 500 TRP A 323 73.37 50.73 REMARK 500 ASP A 525 97.50 85.00 REMARK 500 THR A 528 -31.92 71.45 REMARK 500 HIS A 529 76.53 -118.82 REMARK 500 LYS A 532 -72.38 -61.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 ASP A 301 OD2 48.1 REMARK 620 3 ASP A 305 OD1 98.9 116.9 REMARK 620 4 ASP A 305 OD2 116.5 97.9 43.6 REMARK 620 5 3FX A 603 OAA 124.0 122.2 120.6 119.5 REMARK 620 6 3CX A 604 OAA 101.2 97.4 145.4 139.9 26.6 REMARK 620 7 HOH A 703 O 88.5 121.6 105.0 139.7 46.4 48.2 REMARK 620 8 HOH A 722 O 58.7 101.2 49.5 90.0 119.6 122.7 76.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD2 REMARK 620 2 GLU A 452 OE1 114.6 REMARK 620 3 3FX A 603 OAD 61.5 103.1 REMARK 620 4 3CX A 604 OAB 72.4 108.7 14.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3FX A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3CX A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5ILZ RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5ILH A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5ILH GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5ILH SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET CA A 601 1 HET CA A 602 1 HET 3FX A 603 15 HET 3CX A 604 15 HETNAM CA CALCIUM ION HETNAM 3FX (2R)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC HETNAM 2 3FX ACID HETNAM 3CX (2S)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC HETNAM 2 3CX ACID FORMUL 2 CA 2(CA 2+) FORMUL 4 3FX C9 H19 N O4 S FORMUL 5 3CX C9 H19 N O4 S FORMUL 6 HOH *215(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 255 1 34 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 LEU A 399 1 10 HELIX 27 AC9 ALA A 400 THR A 402 5 3 HELIX 28 AD1 THR A 403 TYR A 412 1 10 HELIX 29 AD2 THR A 419 LYS A 428 1 10 HELIX 30 AD3 PRO A 430 THR A 448 1 19 HELIX 31 AD4 THR A 448 ARG A 455 1 8 HELIX 32 AD5 THR A 460 GLY A 470 1 11 HELIX 33 AD6 SER A 472 LEU A 495 1 24 HELIX 34 AD7 SER A 502 PHE A 505 5 4 HELIX 35 AD8 LEU A 506 TYR A 520 1 15 HELIX 36 AD9 ILE A 521 LEU A 524 5 4 HELIX 37 AE1 VAL A 533 VAL A 543 1 11 LINK OD1 ASP A 301 CA CA A 602 1555 1555 2.41 LINK OD2 ASP A 301 CA CA A 602 1555 1555 2.87 LINK OD1 ASP A 305 CA CA A 602 1555 1555 3.18 LINK OD2 ASP A 305 CA CA A 602 1555 1555 2.47 LINK OD2 ASP A 444 CA CA A 601 1555 1555 2.92 LINK OE1 GLU A 452 CA CA A 601 1555 1555 2.90 LINK CA CA A 601 OADA3FX A 603 1555 1555 2.49 LINK CA CA A 601 OABB3CX A 604 1555 1555 2.38 LINK CA CA A 602 OAAA3FX A 603 1555 1555 2.62 LINK CA CA A 602 OAAB3CX A 604 1555 1555 2.39 LINK CA CA A 602 O HOH A 703 1555 1555 2.68 LINK CA CA A 602 O HOH A 722 1555 1555 2.52 CISPEP 1 SER A 184 PRO A 185 0 3.51 CISPEP 2 ARG A 497 PRO A 498 0 -4.98 SITE 1 AC1 5 ASP A 444 THR A 448 GLU A 452 3FX A 603 SITE 2 AC1 5 3CX A 604 SITE 1 AC2 6 ASP A 301 ASP A 305 3FX A 603 3CX A 604 SITE 2 AC2 6 HOH A 703 HOH A 722 SITE 1 AC3 13 TRP A 273 SER A 298 THR A 401 THR A 402 SITE 2 AC3 13 ARG A 441 ASP A 444 TYR A 520 TYR A 527 SITE 3 AC3 13 CA A 601 CA A 602 3CX A 604 HOH A 703 SITE 4 AC3 13 HOH A 716 SITE 1 AC4 13 TRP A 273 ILE A 297 SER A 298 THR A 401 SITE 2 AC4 13 THR A 403 ARG A 441 ASP A 444 TYR A 520 SITE 3 AC4 13 TYR A 527 CA A 601 CA A 602 3FX A 603 SITE 4 AC4 13 HOH A 703 CRYST1 126.280 126.280 123.270 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007919 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008112 0.00000