HEADER LYASE 04-MAR-16 5ILI TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH CAPSO BUFFER MOLECULE AND TITLE 2 MG2+ IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, CAPSO, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5ILI 1 LINK REVDAT 1 08-MAR-17 5ILI 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 66846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.240 REMARK 3 FREE R VALUE TEST SET COUNT : 1499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2765 - 4.2245 0.75 5581 123 0.1433 0.1972 REMARK 3 2 4.2245 - 3.3534 0.80 5730 124 0.1391 0.1748 REMARK 3 3 3.3534 - 2.9296 0.83 5868 137 0.1630 0.1792 REMARK 3 4 2.9296 - 2.6618 0.84 5929 133 0.1670 0.1960 REMARK 3 5 2.6618 - 2.4711 0.85 5963 138 0.1674 0.2245 REMARK 3 6 2.4711 - 2.3254 0.86 6012 139 0.1717 0.1911 REMARK 3 7 2.3254 - 2.2089 0.87 6029 143 0.1802 0.2141 REMARK 3 8 2.2089 - 2.1128 0.87 6039 141 0.1956 0.2516 REMARK 3 9 2.1128 - 2.0314 0.87 6068 144 0.2256 0.2466 REMARK 3 10 2.0314 - 1.9613 0.87 6082 137 0.2743 0.3245 REMARK 3 11 1.9613 - 1.9000 0.87 6046 140 0.3079 0.3451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4481 REMARK 3 ANGLE : 0.922 6066 REMARK 3 CHIRALITY : 0.038 687 REMARK 3 PLANARITY : 0.005 766 REMARK 3 DIHEDRAL : 13.177 1665 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6644 54.6365 21.6980 REMARK 3 T TENSOR REMARK 3 T11: 0.3205 T22: 0.2211 REMARK 3 T33: 0.3058 T12: -0.0398 REMARK 3 T13: -0.0219 T23: -0.0374 REMARK 3 L TENSOR REMARK 3 L11: 1.0778 L22: 3.4056 REMARK 3 L33: 1.2027 L12: 0.0001 REMARK 3 L13: 0.1265 L23: -0.1163 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.1200 S13: -0.1089 REMARK 3 S21: 0.1504 S22: 0.0331 S23: 0.5764 REMARK 3 S31: 0.1071 S32: -0.1977 S33: -0.0758 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.3649 59.2316 26.0864 REMARK 3 T TENSOR REMARK 3 T11: 0.2927 T22: 0.2473 REMARK 3 T33: 0.2948 T12: 0.0380 REMARK 3 T13: -0.1243 T23: -0.0511 REMARK 3 L TENSOR REMARK 3 L11: 2.2156 L22: 4.6329 REMARK 3 L33: 5.2483 L12: 2.7352 REMARK 3 L13: 0.4216 L23: -0.9915 REMARK 3 S TENSOR REMARK 3 S11: 0.1490 S12: -0.3189 S13: -0.0333 REMARK 3 S21: 0.5404 S22: -0.0671 S23: -0.4860 REMARK 3 S31: -0.0184 S32: 0.6877 S33: -0.0687 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3517 63.6675 9.3226 REMARK 3 T TENSOR REMARK 3 T11: 0.2252 T22: 0.2354 REMARK 3 T33: 0.2703 T12: -0.0339 REMARK 3 T13: 0.0074 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 2.0089 L22: 2.7648 REMARK 3 L33: 4.1330 L12: -0.4754 REMARK 3 L13: -0.5420 L23: 2.1202 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: 0.0718 S13: 0.0702 REMARK 3 S21: -0.1198 S22: 0.1778 S23: -0.5013 REMARK 3 S31: -0.1694 S32: 0.3730 S33: -0.1266 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9472 54.1117 13.6421 REMARK 3 T TENSOR REMARK 3 T11: 0.2183 T22: 0.2003 REMARK 3 T33: 0.1777 T12: -0.0149 REMARK 3 T13: -0.0334 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 3.7211 L22: 8.6042 REMARK 3 L33: 3.6069 L12: -0.4302 REMARK 3 L13: 0.3611 L23: -1.9074 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: 0.1904 S13: -0.3818 REMARK 3 S21: -0.2673 S22: 0.0155 S23: -0.0114 REMARK 3 S31: 0.3434 S32: -0.0267 S33: -0.0422 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5733 65.9310 20.4855 REMARK 3 T TENSOR REMARK 3 T11: 0.2476 T22: 0.2647 REMARK 3 T33: 0.5608 T12: -0.0237 REMARK 3 T13: -0.0017 T23: -0.0569 REMARK 3 L TENSOR REMARK 3 L11: 1.8477 L22: 2.1520 REMARK 3 L33: 0.6577 L12: -0.1654 REMARK 3 L13: 0.2511 L23: 0.4572 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.1137 S13: 0.1421 REMARK 3 S21: 0.0182 S22: -0.0421 S23: 1.0100 REMARK 3 S31: 0.0081 S32: -0.2418 S33: 0.0652 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 495 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6824 84.9393 19.7224 REMARK 3 T TENSOR REMARK 3 T11: 0.2676 T22: 0.2322 REMARK 3 T33: 0.5066 T12: 0.0257 REMARK 3 T13: -0.0759 T23: -0.0839 REMARK 3 L TENSOR REMARK 3 L11: 1.5951 L22: 3.0947 REMARK 3 L33: 0.8517 L12: 0.1076 REMARK 3 L13: 0.0320 L23: 0.0849 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: -0.0442 S13: 0.3581 REMARK 3 S21: -0.1150 S22: -0.0301 S23: 0.8274 REMARK 3 S31: -0.1150 S32: -0.1804 S33: 0.0401 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 496 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9175 67.0932 15.5761 REMARK 3 T TENSOR REMARK 3 T11: 0.2370 T22: 0.2166 REMARK 3 T33: 0.2817 T12: 0.0193 REMARK 3 T13: -0.0441 T23: -0.0423 REMARK 3 L TENSOR REMARK 3 L11: 2.7513 L22: 4.5154 REMARK 3 L33: 2.3564 L12: 1.4490 REMARK 3 L13: 0.9602 L23: 1.4425 REMARK 3 S TENSOR REMARK 3 S11: -0.1310 S12: 0.2317 S13: 0.0559 REMARK 3 S21: -0.4479 S22: 0.0585 S23: 0.5366 REMARK 3 S31: -0.0819 S32: -0.0221 S33: 0.0458 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ILI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66883 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.09793 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 1.49400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM CAPSO, PH 8.5, 150 MM MG REMARK 280 ACETATE, 10% PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.12500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.08500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.06250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.08500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.18750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.08500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.08500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.06250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.08500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.08500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 93.18750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1053 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1065 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 725 O HOH A 1044 2.15 REMARK 500 OAA 3FX A 603 O HOH A 701 2.16 REMARK 500 NE2 HIS A 364 OE2 GLU A 420 2.17 REMARK 500 O HOH A 908 O HOH A 970 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 74.92 51.40 REMARK 500 ASP A 131 -159.41 -77.99 REMARK 500 ILE A 214 -69.18 -108.14 REMARK 500 ASP A 265 77.50 -111.40 REMARK 500 ALA A 306 43.47 -146.96 REMARK 500 TYR A 307 -51.11 -163.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 HOH A 709 O 98.5 REMARK 620 3 HOH A 734 O 140.5 64.2 REMARK 620 4 HOH A 826 O 71.8 65.5 68.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD1 REMARK 620 2 THR A 448 OG1 100.8 REMARK 620 3 GLU A 452 OE2 170.1 88.2 REMARK 620 4 HOH A 701 O 83.5 167.1 86.8 REMARK 620 5 HOH A 730 O 86.5 85.0 90.1 83.1 REMARK 620 6 HOH A 829 O 91.1 109.7 89.9 82.1 165.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3FX A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3CX A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILX RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5ILI A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5ILI GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5ILI SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET MG A 601 1 HET MG A 602 1 HET 3FX A 603 15 HET 3CX A 604 15 HETNAM MG MAGNESIUM ION HETNAM 3FX (2R)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC HETNAM 2 3FX ACID HETNAM 3CX (2S)-3-(CYCLOHEXYLAMINO)-2-HYDROXYPROPANE-1-SULFONIC HETNAM 2 3CX ACID FORMUL 2 MG 2(MG 2+) FORMUL 4 3FX C9 H19 N O4 S FORMUL 5 3CX C9 H19 N O4 S FORMUL 6 HOH *375(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 255 1 34 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 SER A 354 GLY A 357 5 4 HELIX 25 AC7 ARG A 358 HIS A 360 5 3 HELIX 26 AC8 ILE A 361 GLY A 386 1 26 HELIX 27 AC9 PRO A 390 LEU A 399 1 10 HELIX 28 AD1 ALA A 400 THR A 402 5 3 HELIX 29 AD2 THR A 403 LEU A 413 1 11 HELIX 30 AD3 THR A 419 LYS A 428 1 10 HELIX 31 AD4 PRO A 430 ARG A 455 1 26 HELIX 32 AD5 THR A 460 GLY A 470 1 11 HELIX 33 AD6 SER A 472 LEU A 495 1 24 HELIX 34 AD7 SER A 502 PHE A 505 5 4 HELIX 35 AD8 LEU A 506 TYR A 520 1 15 HELIX 36 AD9 ILE A 521 LEU A 524 5 4 HELIX 37 AE1 VAL A 533 VAL A 543 1 11 LINK OD1 ASP A 301 MG MG A 602 1555 1555 2.08 LINK OD1 ASP A 444 MG MG A 601 1555 1555 2.08 LINK OG1 THR A 448 MG MG A 601 1555 1555 2.08 LINK OE2 GLU A 452 MG MG A 601 1555 1555 2.07 LINK MG MG A 601 O HOH A 701 1555 1555 2.07 LINK MG MG A 601 O HOH A 730 1555 1555 2.07 LINK MG MG A 601 O HOH A 829 1555 1555 2.08 LINK MG MG A 602 O HOH A 709 1555 1555 2.63 LINK MG MG A 602 O HOH A 734 1555 1555 2.07 LINK MG MG A 602 O HOH A 826 1555 1555 2.52 CISPEP 1 SER A 184 PRO A 185 0 3.68 CISPEP 2 ARG A 497 PRO A 498 0 -7.29 SITE 1 AC1 7 ASP A 444 THR A 448 GLU A 452 3FX A 603 SITE 2 AC1 7 HOH A 701 HOH A 730 HOH A 829 SITE 1 AC2 6 ASP A 301 3FX A 603 3CX A 604 HOH A 709 SITE 2 AC2 6 HOH A 734 HOH A 826 SITE 1 AC3 13 THR A 401 THR A 402 THR A 403 ARG A 441 SITE 2 AC3 13 ASP A 444 TYR A 527 MG A 601 MG A 602 SITE 3 AC3 13 3CX A 604 HOH A 701 HOH A 709 HOH A 717 SITE 4 AC3 13 HOH A 829 SITE 1 AC4 13 TRP A 273 THR A 401 THR A 402 ARG A 441 SITE 2 AC4 13 ASP A 444 TYR A 520 TYR A 527 MG A 602 SITE 3 AC4 13 3FX A 603 HOH A 701 HOH A 709 HOH A 717 SITE 4 AC4 13 HOH A 829 CRYST1 126.170 126.170 124.250 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008048 0.00000