HEADER LYASE 04-MAR-16 5ILJ TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH BIS-TRIS BUFFER MOLECULE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, BIS-TRIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5ILJ 1 REMARK REVDAT 1 08-MAR-17 5ILJ 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 54338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7422 - 5.4671 1.00 3386 179 0.1416 0.1698 REMARK 3 2 5.4671 - 4.3405 1.00 3205 177 0.1309 0.1671 REMARK 3 3 4.3405 - 3.7922 1.00 3204 158 0.1287 0.1444 REMARK 3 4 3.7922 - 3.4456 1.00 3136 176 0.1443 0.1590 REMARK 3 5 3.4456 - 3.1987 0.92 2909 147 0.1609 0.2119 REMARK 3 6 3.1987 - 3.0102 0.83 2617 125 0.1637 0.1913 REMARK 3 7 3.0102 - 2.8594 0.84 2629 133 0.1667 0.1816 REMARK 3 8 2.8594 - 2.7350 0.84 2614 161 0.1698 0.1984 REMARK 3 9 2.7350 - 2.6297 0.85 2626 132 0.1720 0.1891 REMARK 3 10 2.6297 - 2.5390 0.85 2661 138 0.1747 0.1905 REMARK 3 11 2.5390 - 2.4596 0.83 2552 148 0.1747 0.1921 REMARK 3 12 2.4596 - 2.3893 0.80 2472 131 0.1756 0.2205 REMARK 3 13 2.3893 - 2.3264 0.81 2521 128 0.1776 0.2400 REMARK 3 14 2.3264 - 2.2696 0.81 2487 126 0.1889 0.2504 REMARK 3 15 2.2696 - 2.2181 0.81 2524 132 0.1973 0.2307 REMARK 3 16 2.2181 - 2.1708 0.81 2511 121 0.2112 0.2453 REMARK 3 17 2.1708 - 2.1274 0.81 2522 122 0.2179 0.2692 REMARK 3 18 2.1274 - 2.0873 0.82 2550 122 0.2330 0.2680 REMARK 3 19 2.0873 - 2.0500 0.82 2522 134 0.2579 0.3057 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4467 REMARK 3 ANGLE : 0.976 6060 REMARK 3 CHIRALITY : 0.041 684 REMARK 3 PLANARITY : 0.004 767 REMARK 3 DIHEDRAL : 14.553 1653 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8196 55.7586 23.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.3563 T22: 0.2298 REMARK 3 T33: 0.1602 T12: -0.0433 REMARK 3 T13: 0.0061 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 1.7415 L22: 3.1779 REMARK 3 L33: 1.1694 L12: 0.3332 REMARK 3 L13: -0.1179 L23: 0.4342 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: -0.2593 S13: -0.1575 REMARK 3 S21: 0.3624 S22: -0.0226 S23: 0.2847 REMARK 3 S31: 0.1247 S32: -0.1252 S33: -0.0032 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.5668 64.0763 16.3025 REMARK 3 T TENSOR REMARK 3 T11: 0.2746 T22: 0.3360 REMARK 3 T33: 0.2703 T12: 0.0045 REMARK 3 T13: -0.0550 T23: -0.1043 REMARK 3 L TENSOR REMARK 3 L11: 5.1968 L22: 4.5086 REMARK 3 L33: 3.6689 L12: -0.4490 REMARK 3 L13: -2.9940 L23: 3.0030 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.2248 S13: -0.1279 REMARK 3 S21: 0.0424 S22: 0.4341 S23: -0.9562 REMARK 3 S31: -0.0415 S32: 0.6875 S33: -0.4092 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4860 59.8595 9.2447 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.2168 REMARK 3 T33: 0.1303 T12: -0.0118 REMARK 3 T13: -0.0017 T23: -0.0461 REMARK 3 L TENSOR REMARK 3 L11: 2.5492 L22: 1.6890 REMARK 3 L33: 2.0001 L12: -0.3846 REMARK 3 L13: -0.9385 L23: 0.6345 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: 0.2246 S13: -0.0693 REMARK 3 S21: -0.1937 S22: 0.0497 S23: -0.2105 REMARK 3 S31: -0.0197 S32: 0.0841 S33: -0.0260 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8232 66.5424 19.8428 REMARK 3 T TENSOR REMARK 3 T11: 0.2311 T22: 0.2923 REMARK 3 T33: 0.3927 T12: -0.0266 REMARK 3 T13: 0.0093 T23: -0.0867 REMARK 3 L TENSOR REMARK 3 L11: 2.0083 L22: 3.3912 REMARK 3 L33: 0.5632 L12: 0.1178 REMARK 3 L13: 0.2169 L23: 0.7991 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: -0.0920 S13: 0.2523 REMARK 3 S21: 0.0083 S22: -0.2564 S23: 1.1099 REMARK 3 S31: 0.0280 S32: -0.2769 S33: 0.1054 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4936 86.9745 22.9260 REMARK 3 T TENSOR REMARK 3 T11: 0.2628 T22: 0.3178 REMARK 3 T33: 0.7724 T12: 0.0617 REMARK 3 T13: 0.0458 T23: -0.1585 REMARK 3 L TENSOR REMARK 3 L11: 1.5206 L22: 2.5406 REMARK 3 L33: 1.2303 L12: 0.4322 REMARK 3 L13: 0.2157 L23: 0.5076 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: -0.2719 S13: 0.5633 REMARK 3 S21: 0.1247 S22: -0.1443 S23: 1.2249 REMARK 3 S31: -0.1296 S32: -0.3440 S33: 0.0449 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 519 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9729 80.9205 16.5029 REMARK 3 T TENSOR REMARK 3 T11: 0.2434 T22: 0.1763 REMARK 3 T33: 0.2159 T12: 0.0176 REMARK 3 T13: -0.0260 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 2.3549 L22: 4.1639 REMARK 3 L33: 1.7220 L12: 0.0891 REMARK 3 L13: -0.1019 L23: -0.1007 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: 0.0561 S13: 0.3276 REMARK 3 S21: -0.3081 S22: -0.1071 S23: 0.2973 REMARK 3 S31: -0.2105 S32: -0.0752 S33: 0.0296 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 520 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4703 63.8497 8.1307 REMARK 3 T TENSOR REMARK 3 T11: 0.3663 T22: 0.2889 REMARK 3 T33: 0.2987 T12: -0.0018 REMARK 3 T13: -0.1114 T23: -0.0944 REMARK 3 L TENSOR REMARK 3 L11: 3.2532 L22: 7.0279 REMARK 3 L33: 2.6407 L12: 1.0381 REMARK 3 L13: 0.2020 L23: -0.5383 REMARK 3 S TENSOR REMARK 3 S11: -0.1044 S12: 0.2793 S13: 0.1818 REMARK 3 S21: -0.9827 S22: 0.0073 S23: 0.7509 REMARK 3 S31: -0.0602 S32: 0.0046 S33: 0.1246 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ILJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54352 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 44.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.08910 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.51940 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS, PH 6.5, 300 MM CA REMARK 280 ACETATE, 16% PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.14500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.26000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.26000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.57250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.26000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.26000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 91.71750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.26000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.26000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.57250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.26000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.26000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 91.71750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.14500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 986 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1000 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 19 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 473 O HOH A 701 1.84 REMARK 500 O HOH A 981 O HOH A 997 1.89 REMARK 500 OD2 ASP A 66 O HOH A 702 1.90 REMARK 500 OE2 GLU A 352 O HOH A 703 1.96 REMARK 500 O HOH A 722 O HOH A 1019 1.97 REMARK 500 O HOH A 1003 O HOH A 1030 2.01 REMARK 500 O HOH A 842 O HOH A 957 2.01 REMARK 500 O HOH A 732 O HOH A 1007 2.03 REMARK 500 O HOH A 994 O HOH A 1031 2.03 REMARK 500 O HOH A 926 O HOH A 1033 2.13 REMARK 500 OE2 GLU A 218 O HOH A 704 2.13 REMARK 500 O HOH A 807 O HOH A 849 2.14 REMARK 500 ND1 HIS A 159 O HOH A 705 2.16 REMARK 500 O HOH A 946 O HOH A 998 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1006 O HOH A 1021 8665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 73.55 52.11 REMARK 500 ASN A 100 78.70 -115.42 REMARK 500 CYS A 101 33.84 -161.81 REMARK 500 ILE A 214 -70.80 -109.05 REMARK 500 TYR A 307 -55.64 -154.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5ILZ RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5ILJ A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5ILJ GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5ILJ SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET BTB A 601 14 HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 2 BTB C8 H19 N O5 FORMUL 3 HOH *366(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 255 1 34 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 LEU A 399 1 10 HELIX 27 AC9 ALA A 400 THR A 402 5 3 HELIX 28 AD1 THR A 403 TYR A 412 1 10 HELIX 29 AD2 THR A 419 LYS A 428 1 10 HELIX 30 AD3 PRO A 430 ARG A 455 1 26 HELIX 31 AD4 THR A 460 GLY A 470 1 11 HELIX 32 AD5 SER A 472 LEU A 495 1 24 HELIX 33 AD6 SER A 502 PHE A 505 5 4 HELIX 34 AD7 LEU A 506 TYR A 520 1 15 HELIX 35 AD8 ILE A 521 LEU A 524 5 4 HELIX 36 AD9 VAL A 533 VAL A 543 1 11 CISPEP 1 SER A 184 PRO A 185 0 3.00 CISPEP 2 ARG A 497 PRO A 498 0 -5.57 SITE 1 AC1 11 ARG A 264 TRP A 273 ILE A 294 SER A 298 SITE 2 AC1 11 ASP A 301 THR A 402 THR A 403 TYR A 520 SITE 3 AC1 11 ASP A 525 TYR A 527 HOH A 880 CRYST1 126.520 126.520 122.290 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008177 0.00000