HEADER TRANSFERASE 04-MAR-16 5ILQ TITLE CRYSTAL STRUCTURE OF TRUNCATED UNLIGANDED ASPARTATE TRANSCARBAMOYLASE TITLE 2 FROM PLASMODIUM FALCIPARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 37-375; COMPND 5 EC: 2.1.3.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE 3D7); SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: ATCASE, MAL13P1.221; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PASK-IBA3-PFATC-MET3 KEYWDS PLASMODIUM FALCIPARUM, MALARIA, ASPARTATE, PYRIMIDINE BIOSYNTHESIS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.LUNEV,S.S.BOSCH,F.D.A.BATISTA,C.WRENGER,M.R.GROVES REVDAT 6 07-FEB-24 5ILQ 1 REMARK REVDAT 5 08-MAR-23 5ILQ 1 SPRSDE REVDAT 4 03-APR-19 5ILQ 1 SOURCE SPRSDE REVDAT 3 27-JUL-16 5ILQ 1 JRNL REVDAT 2 13-JUL-16 5ILQ 1 JRNL REVDAT 1 08-JUN-16 5ILQ 0 JRNL AUTH S.LUNEV,S.S.BOSCH,F.D.A.BATISTA,C.WRENGER,M.R.GROVES JRNL TITL CRYSTAL STRUCTURE OF TRUNCATED ASPARTATE TRANSCARBAMOYLASE JRNL TITL 2 FROM PLASMODIUM FALCIPARUM. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 72 523 2016 JRNL REFN ESSN 2053-230X JRNL PMID 27380369 JRNL DOI 10.1107/S2053230X16008475 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 45217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 2136 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3038 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 169 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7798 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 86 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.447 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.229 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7962 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7658 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10752 ; 1.961 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17672 ; 3.787 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 960 ; 7.341 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 369 ;36.178 ;25.122 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1471 ;17.218 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;22.989 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1240 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8837 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1785 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3861 ; 2.821 ; 3.593 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3860 ; 2.821 ; 3.592 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4814 ; 4.464 ; 5.372 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 47 A 104 REMARK 3 ORIGIN FOR THE GROUP (A): 46.2991 11.8960 14.4866 REMARK 3 T TENSOR REMARK 3 T11: 0.2160 T22: 0.0877 REMARK 3 T33: 0.2257 T12: -0.0361 REMARK 3 T13: -0.0174 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 4.0808 L22: 0.5700 REMARK 3 L33: 2.0306 L12: -0.2223 REMARK 3 L13: -0.6355 L23: 0.1505 REMARK 3 S TENSOR REMARK 3 S11: 0.0601 S12: 0.1394 S13: 0.4869 REMARK 3 S21: 0.0181 S22: 0.0246 S23: -0.0599 REMARK 3 S31: -0.3504 S32: 0.1590 S33: -0.0846 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 105 A 161 REMARK 3 ORIGIN FOR THE GROUP (A): 31.8861 0.0836 11.5522 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.1714 REMARK 3 T33: 0.2846 T12: -0.0072 REMARK 3 T13: 0.0200 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 3.1714 L22: 1.9800 REMARK 3 L33: 4.3255 L12: 1.0465 REMARK 3 L13: 1.6226 L23: 1.5471 REMARK 3 S TENSOR REMARK 3 S11: 0.0558 S12: 0.1378 S13: -0.6066 REMARK 3 S21: 0.0431 S22: -0.0377 S23: 0.2658 REMARK 3 S31: 0.6636 S32: -0.1731 S33: -0.0181 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 162 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 51.8518 1.7275 9.6996 REMARK 3 T TENSOR REMARK 3 T11: 0.1992 T22: 0.2107 REMARK 3 T33: 0.1227 T12: -0.0124 REMARK 3 T13: 0.0139 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 3.7862 L22: 0.8094 REMARK 3 L33: 0.7764 L12: -1.0363 REMARK 3 L13: 0.4104 L23: -0.0645 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: 0.2213 S13: -0.1739 REMARK 3 S21: -0.0422 S22: 0.0734 S23: -0.0095 REMARK 3 S31: 0.1416 S32: 0.1546 S33: -0.0214 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 215 A 296 REMARK 3 ORIGIN FOR THE GROUP (A): 62.5163 -9.0916 8.6877 REMARK 3 T TENSOR REMARK 3 T11: 0.2118 T22: 0.2521 REMARK 3 T33: 0.2300 T12: 0.0354 REMARK 3 T13: 0.0501 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 2.2878 L22: 3.5802 REMARK 3 L33: 3.2557 L12: -0.0072 REMARK 3 L13: 0.1693 L23: -0.0216 REMARK 3 S TENSOR REMARK 3 S11: -0.1785 S12: 0.1040 S13: -0.4875 REMARK 3 S21: 0.0254 S22: 0.1165 S23: -0.0971 REMARK 3 S31: 0.4406 S32: 0.1867 S33: 0.0621 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 312 A 370 REMARK 3 ORIGIN FOR THE GROUP (A): 56.1337 -6.7848 23.7569 REMARK 3 T TENSOR REMARK 3 T11: 0.3096 T22: 0.2583 REMARK 3 T33: 0.2181 T12: 0.0600 REMARK 3 T13: 0.0164 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.4025 L22: 1.4668 REMARK 3 L33: 1.0631 L12: -1.1217 REMARK 3 L13: 0.4737 L23: -0.2722 REMARK 3 S TENSOR REMARK 3 S11: -0.0656 S12: -0.2399 S13: -0.4449 REMARK 3 S21: 0.1924 S22: -0.0108 S23: -0.1705 REMARK 3 S31: 0.3524 S32: 0.2691 S33: 0.0765 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 371 A 383 REMARK 3 ORIGIN FOR THE GROUP (A): 45.4756 19.8080 18.1469 REMARK 3 T TENSOR REMARK 3 T11: 0.5078 T22: 0.5016 REMARK 3 T33: 0.6013 T12: -0.0824 REMARK 3 T13: 0.0460 T23: -0.0578 REMARK 3 L TENSOR REMARK 3 L11: 1.0769 L22: 7.1395 REMARK 3 L33: 5.8078 L12: 0.0861 REMARK 3 L13: -0.9361 L23: 5.8911 REMARK 3 S TENSOR REMARK 3 S11: 0.4858 S12: -0.4123 S13: 0.5717 REMARK 3 S21: 0.1145 S22: -0.3578 S23: 0.4079 REMARK 3 S31: -0.3428 S32: 0.0220 S33: -0.1280 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 44 B 62 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6651 7.0448 50.6905 REMARK 3 T TENSOR REMARK 3 T11: 0.4466 T22: 0.2847 REMARK 3 T33: 0.3319 T12: -0.1008 REMARK 3 T13: 0.0286 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.9853 L22: 5.2814 REMARK 3 L33: 2.4272 L12: -2.1455 REMARK 3 L13: -0.5774 L23: 2.9718 REMARK 3 S TENSOR REMARK 3 S11: -0.2403 S12: -0.1640 S13: 0.2770 REMARK 3 S21: 0.3555 S22: 0.0748 S23: 0.0951 REMARK 3 S31: -0.1911 S32: 0.2252 S33: 0.1655 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 63 B 109 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3317 5.8563 41.2612 REMARK 3 T TENSOR REMARK 3 T11: 0.1322 T22: 0.0222 REMARK 3 T33: 0.1476 T12: -0.0473 REMARK 3 T13: -0.0041 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.0637 L22: 2.2024 REMARK 3 L33: 4.2830 L12: -0.7130 REMARK 3 L13: -0.7949 L23: -0.5095 REMARK 3 S TENSOR REMARK 3 S11: 0.0948 S12: 0.0356 S13: 0.0440 REMARK 3 S21: 0.0768 S22: -0.0944 S23: 0.2240 REMARK 3 S31: -0.1989 S32: 0.0579 S33: -0.0003 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 110 B 162 REMARK 3 ORIGIN FOR THE GROUP (A): 33.7121 -4.4720 29.9252 REMARK 3 T TENSOR REMARK 3 T11: 0.3134 T22: 0.1622 REMARK 3 T33: 0.2060 T12: -0.0052 REMARK 3 T13: 0.0362 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.9012 L22: 3.6093 REMARK 3 L33: 0.8384 L12: -2.3884 REMARK 3 L13: -0.0142 L23: -0.5995 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: 0.2182 S13: -0.4905 REMARK 3 S21: -0.4416 S22: -0.0970 S23: 0.0555 REMARK 3 S31: 0.3646 S32: 0.0942 S33: 0.0790 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 163 B 214 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2790 -4.0890 48.9537 REMARK 3 T TENSOR REMARK 3 T11: 0.2860 T22: 0.0280 REMARK 3 T33: 0.1357 T12: -0.0333 REMARK 3 T13: -0.0119 T23: 0.0341 REMARK 3 L TENSOR REMARK 3 L11: 2.1065 L22: 0.3441 REMARK 3 L33: 2.0907 L12: 0.7571 REMARK 3 L13: -0.9124 L23: -0.6230 REMARK 3 S TENSOR REMARK 3 S11: -0.1105 S12: 0.0590 S13: -0.1071 REMARK 3 S21: 0.0076 S22: -0.0244 S23: -0.0608 REMARK 3 S31: 0.2117 S32: 0.1277 S33: 0.1349 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 215 B 275 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5149 -14.2563 56.8716 REMARK 3 T TENSOR REMARK 3 T11: 0.2699 T22: 0.0187 REMARK 3 T33: 0.1240 T12: -0.0419 REMARK 3 T13: 0.0416 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.4803 L22: 3.4507 REMARK 3 L33: 3.0930 L12: -0.7631 REMARK 3 L13: 1.0453 L23: 0.3319 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.0709 S13: -0.2686 REMARK 3 S21: 0.0522 S22: -0.0214 S23: 0.1139 REMARK 3 S31: 0.3604 S32: 0.0532 S33: 0.0012 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 276 B 371 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9358 -7.0059 47.2419 REMARK 3 T TENSOR REMARK 3 T11: 0.2636 T22: 0.1244 REMARK 3 T33: 0.2301 T12: -0.0467 REMARK 3 T13: 0.0112 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.6471 L22: 1.3335 REMARK 3 L33: 2.4016 L12: 0.5263 REMARK 3 L13: -0.0708 L23: -0.3640 REMARK 3 S TENSOR REMARK 3 S11: -0.0689 S12: 0.1595 S13: -0.1585 REMARK 3 S21: -0.0682 S22: 0.1319 S23: 0.3685 REMARK 3 S31: 0.3486 S32: -0.5060 S33: -0.0630 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 372 B 382 REMARK 3 ORIGIN FOR THE GROUP (A): 32.5638 18.1584 44.9565 REMARK 3 T TENSOR REMARK 3 T11: 0.6234 T22: 0.4842 REMARK 3 T33: 0.6148 T12: -0.0561 REMARK 3 T13: 0.0396 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 0.1331 L22: 5.7108 REMARK 3 L33: 2.6472 L12: -0.5742 REMARK 3 L13: -0.2010 L23: 3.6042 REMARK 3 S TENSOR REMARK 3 S11: -0.0437 S12: -0.0688 S13: 0.2458 REMARK 3 S21: -0.7234 S22: 0.1559 S23: -0.7011 REMARK 3 S31: -0.7539 S32: 0.0712 S33: -0.1122 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 44 C 62 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6693 20.5066 17.0965 REMARK 3 T TENSOR REMARK 3 T11: 0.2857 T22: 0.2788 REMARK 3 T33: 0.4455 T12: 0.0446 REMARK 3 T13: -0.0398 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.2410 L22: 6.9988 REMARK 3 L33: 2.4178 L12: 0.6744 REMARK 3 L13: -0.1211 L23: -1.3714 REMARK 3 S TENSOR REMARK 3 S11: -0.1191 S12: -0.0173 S13: 0.2558 REMARK 3 S21: 0.0088 S22: 0.1623 S23: 0.2546 REMARK 3 S31: -0.4641 S32: -0.2244 S33: -0.0432 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 63 C 128 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0247 12.6931 14.8099 REMARK 3 T TENSOR REMARK 3 T11: 0.1615 T22: 0.0608 REMARK 3 T33: 0.1161 T12: -0.0144 REMARK 3 T13: 0.0194 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 3.2113 L22: 2.2997 REMARK 3 L33: 2.4410 L12: 0.2980 REMARK 3 L13: 0.3636 L23: -1.0734 REMARK 3 S TENSOR REMARK 3 S11: -0.0039 S12: 0.2289 S13: -0.0349 REMARK 3 S21: -0.1494 S22: 0.0297 S23: -0.0706 REMARK 3 S31: -0.0200 S32: -0.0355 S33: -0.0258 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 129 C 161 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0139 -3.6494 25.9570 REMARK 3 T TENSOR REMARK 3 T11: 0.3398 T22: 0.2236 REMARK 3 T33: 0.3146 T12: -0.0251 REMARK 3 T13: -0.0773 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 1.1443 L22: 4.3093 REMARK 3 L33: 2.7622 L12: 1.5221 REMARK 3 L13: -0.8558 L23: -1.6878 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: 0.0362 S13: -0.4702 REMARK 3 S21: 0.0080 S22: 0.0424 S23: -0.2700 REMARK 3 S31: 0.7041 S32: 0.2324 S33: -0.0240 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 162 C 214 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0465 9.7712 8.0423 REMARK 3 T TENSOR REMARK 3 T11: 0.1262 T22: 0.2400 REMARK 3 T33: 0.2581 T12: -0.0388 REMARK 3 T13: -0.0471 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.6637 L22: 1.3442 REMARK 3 L33: 3.7405 L12: -0.2038 REMARK 3 L13: 0.4778 L23: -0.4757 REMARK 3 S TENSOR REMARK 3 S11: 0.0623 S12: 0.1466 S13: 0.0331 REMARK 3 S21: -0.1786 S22: 0.0455 S23: 0.3753 REMARK 3 S31: 0.1976 S32: -0.2002 S33: -0.1078 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 215 C 295 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0336 4.8878 -5.0595 REMARK 3 T TENSOR REMARK 3 T11: 0.2247 T22: 0.3688 REMARK 3 T33: 0.3602 T12: -0.0411 REMARK 3 T13: -0.1336 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 2.4872 L22: 3.1591 REMARK 3 L33: 2.7711 L12: 0.7087 REMARK 3 L13: -1.3056 L23: 0.4929 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.3689 S13: -0.2153 REMARK 3 S21: -0.3332 S22: -0.0234 S23: 0.3070 REMARK 3 S31: 0.1637 S32: -0.2116 S33: -0.0024 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 296 C 373 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2519 7.1876 -3.9162 REMARK 3 T TENSOR REMARK 3 T11: 0.1920 T22: 0.2881 REMARK 3 T33: 0.2486 T12: -0.0546 REMARK 3 T13: -0.0444 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.1935 L22: 1.4165 REMARK 3 L33: 4.2151 L12: -0.3031 REMARK 3 L13: -0.3546 L23: 0.4692 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: 0.4024 S13: -0.2388 REMARK 3 S21: -0.2954 S22: 0.0943 S23: 0.0630 REMARK 3 S31: 0.2970 S32: 0.1121 S33: -0.1322 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 374 C 383 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8432 28.8199 17.8998 REMARK 3 T TENSOR REMARK 3 T11: 0.4112 T22: 0.2334 REMARK 3 T33: 0.3007 T12: 0.0227 REMARK 3 T13: -0.0137 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 5.6489 L22: 7.9957 REMARK 3 L33: 0.5108 L12: -4.3315 REMARK 3 L13: -0.0528 L23: 1.5755 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: 0.0104 S13: -0.2420 REMARK 3 S21: -0.1573 S22: -0.0083 S23: 0.0057 REMARK 3 S31: -0.0868 S32: -0.0234 S33: -0.0332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5ILQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97957 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED CHANNEL REMARK 200 -CUT SILICON MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45217 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 45.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.510 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 10.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ML4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM SODIUM SULPHATE, 5 MM MGSO4, 15 REMARK 280 -18 % (W/V) PEG 3350 IN 100MM BIS-TRIS PROPANE PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.90000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 37 REMARK 465 PHE A 38 REMARK 465 TYR A 39 REMARK 465 ILE A 40 REMARK 465 ASN A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 TYR A 44 REMARK 465 LYS A 45 REMARK 465 ILE A 46 REMARK 465 GLN A 297 REMARK 465 LYS A 298 REMARK 465 GLU A 299 REMARK 465 ARG A 300 REMARK 465 PHE A 301 REMARK 465 THR A 302 REMARK 465 ASP A 303 REMARK 465 VAL A 304 REMARK 465 ASP A 305 REMARK 465 GLU A 306 REMARK 465 TYR A 307 REMARK 465 ASN A 308 REMARK 465 GLN A 309 REMARK 465 TYR A 310 REMARK 465 LYS A 311 REMARK 465 SER A 375 REMARK 465 SER A 376 REMARK 465 ALA A 377 REMARK 465 TRP A 378 REMARK 465 GLU A 384 REMARK 465 LYS A 385 REMARK 465 MET B 37 REMARK 465 PHE B 38 REMARK 465 TYR B 39 REMARK 465 ILE B 40 REMARK 465 ASN B 41 REMARK 465 SER B 42 REMARK 465 LYS B 43 REMARK 465 GLN B 297 REMARK 465 LYS B 298 REMARK 465 GLU B 299 REMARK 465 ARG B 300 REMARK 465 PHE B 301 REMARK 465 THR B 302 REMARK 465 ASP B 303 REMARK 465 VAL B 304 REMARK 465 ASP B 305 REMARK 465 GLU B 306 REMARK 465 TYR B 307 REMARK 465 ASN B 308 REMARK 465 GLN B 309 REMARK 465 TYR B 310 REMARK 465 LYS B 311 REMARK 465 PHE B 383 REMARK 465 GLU B 384 REMARK 465 LYS B 385 REMARK 465 MET C 37 REMARK 465 PHE C 38 REMARK 465 TYR C 39 REMARK 465 ILE C 40 REMARK 465 ASN C 41 REMARK 465 SER C 42 REMARK 465 LYS C 43 REMARK 465 GLN C 297 REMARK 465 LYS C 298 REMARK 465 GLU C 299 REMARK 465 ARG C 300 REMARK 465 PHE C 301 REMARK 465 THR C 302 REMARK 465 ASP C 303 REMARK 465 VAL C 304 REMARK 465 ASP C 305 REMARK 465 GLU C 306 REMARK 465 TYR C 307 REMARK 465 ASN C 308 REMARK 465 GLN C 309 REMARK 465 TYR C 310 REMARK 465 LYS C 311 REMARK 465 GLU C 384 REMARK 465 LYS C 385 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1 GOL B 401 O HOH B 501 1.58 REMARK 500 OG SER C 107 O HOH C 501 2.11 REMARK 500 O HOH C 501 O HOH C 516 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 111 NE - CZ - NH1 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 111 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 208 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 237 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 237 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 363 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 LEU B 126 CA - CB - CG ANGL. DEV. = 27.9 DEGREES REMARK 500 ARG B 159 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 208 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 208 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 237 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 363 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ASP C 90 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 LEU C 126 CA - CB - CG ANGL. DEV. = 27.0 DEGREES REMARK 500 ARG C 208 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG C 237 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG C 237 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG C 295 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 363 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 107 65.91 -154.11 REMARK 500 TYR A 137 50.64 70.33 REMARK 500 PHE A 314 60.71 -107.47 REMARK 500 LEU A 334 158.21 85.50 REMARK 500 VAL A 337 -80.15 -120.70 REMARK 500 LEU B 94 78.95 -153.28 REMARK 500 SER B 107 66.42 -154.96 REMARK 500 TYR B 137 51.53 71.86 REMARK 500 PHE B 314 57.45 -106.34 REMARK 500 LEU B 334 158.84 84.62 REMARK 500 ASN B 338 10.70 56.24 REMARK 500 SER B 375 -154.12 62.52 REMARK 500 SER C 107 68.27 -153.52 REMARK 500 TYR C 137 50.02 70.92 REMARK 500 HIS C 187 73.08 -150.03 REMARK 500 PHE C 314 60.56 -108.02 REMARK 500 ASN C 323 40.30 -104.65 REMARK 500 LEU C 334 157.71 86.21 REMARK 500 ASN C 338 -29.74 148.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER C 375 SER C 376 146.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 401 DBREF 5ILQ A 37 375 UNP Q8IDP8 Q8IDP8_PLAF7 37 375 DBREF 5ILQ B 37 375 UNP Q8IDP8 Q8IDP8_PLAF7 37 375 DBREF 5ILQ C 37 375 UNP Q8IDP8 Q8IDP8_PLAF7 37 375 SEQADV 5ILQ SER A 376 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ ALA A 377 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ TRP A 378 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ SER A 379 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ HIS A 380 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PRO A 381 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLN A 382 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PHE A 383 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLU A 384 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ LYS A 385 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ SER B 376 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ ALA B 377 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ TRP B 378 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ SER B 379 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ HIS B 380 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PRO B 381 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLN B 382 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PHE B 383 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLU B 384 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ LYS B 385 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ SER C 376 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ ALA C 377 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ TRP C 378 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ SER C 379 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ HIS C 380 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PRO C 381 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLN C 382 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ PHE C 383 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ GLU C 384 UNP Q8IDP8 EXPRESSION TAG SEQADV 5ILQ LYS C 385 UNP Q8IDP8 EXPRESSION TAG SEQRES 1 A 349 MET PHE TYR ILE ASN SER LYS TYR LYS ILE ASP LEU ASP SEQRES 2 A 349 LYS ILE MET THR LYS MET LYS ASN LYS SER VAL ILE ASN SEQRES 3 A 349 ILE ASP ASP VAL ASP ASP GLU GLU LEU LEU ALA ILE LEU SEQRES 4 A 349 TYR THR SER LYS GLN PHE GLU LYS ILE LEU LYS ASN ASN SEQRES 5 A 349 GLU ASP SER LYS TYR LEU GLU ASN LYS VAL PHE CYS SER SEQRES 6 A 349 VAL PHE LEU GLU PRO SER THR ARG THR ARG CYS SER PHE SEQRES 7 A 349 ASP ALA ALA ILE LEU LYS LEU GLY SER LYS VAL LEU ASN SEQRES 8 A 349 ILE THR ASP MET ASN SER THR SER PHE TYR LYS GLY GLU SEQRES 9 A 349 THR VAL GLU ASP ALA PHE LYS ILE LEU SER THR TYR VAL SEQRES 10 A 349 ASP GLY ILE ILE TYR ARG ASP PRO SER LYS LYS ASN VAL SEQRES 11 A 349 ASP ILE ALA VAL SER SER SER SER LYS PRO ILE ILE ASN SEQRES 12 A 349 ALA GLY ASN GLY THR GLY GLU HIS PRO THR GLN SER LEU SEQRES 13 A 349 LEU ASP PHE TYR THR ILE HIS ASN TYR PHE PRO PHE ILE SEQRES 14 A 349 LEU ASP ARG ASN ILE ASN LYS LYS LEU ASN ILE ALA PHE SEQRES 15 A 349 VAL GLY ASP LEU LYS ASN GLY ARG THR VAL HIS SER LEU SEQRES 16 A 349 SER LYS LEU LEU SER ARG TYR ASN VAL SER PHE ASN PHE SEQRES 17 A 349 VAL SER CYS LYS SER LEU ASN ILE PRO LYS ASP ILE VAL SEQRES 18 A 349 ASN THR ILE THR TYR ASN LEU LYS LYS ASN ASN PHE TYR SEQRES 19 A 349 SER ASP ASP SER ILE LYS TYR PHE ASP ASN LEU GLU GLU SEQRES 20 A 349 GLY LEU GLU ASP VAL HIS ILE ILE TYR MET THR ARG ILE SEQRES 21 A 349 GLN LYS GLU ARG PHE THR ASP VAL ASP GLU TYR ASN GLN SEQRES 22 A 349 TYR LYS ASN ALA PHE ILE LEU SER ASN LYS THR LEU GLU SEQRES 23 A 349 ASN THR ARG ASP ASP THR LYS ILE LEU HIS PRO LEU PRO SEQRES 24 A 349 ARG VAL ASN GLU ILE LYS VAL GLU VAL ASP SER ASN PRO SEQRES 25 A 349 LYS SER VAL TYR PHE THR GLN ALA GLU ASN GLY LEU TYR SEQRES 26 A 349 VAL ARG MET ALA LEU LEU TYR LEU ILE PHE SER SER THR SEQRES 27 A 349 SER SER ALA TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 349 MET PHE TYR ILE ASN SER LYS TYR LYS ILE ASP LEU ASP SEQRES 2 B 349 LYS ILE MET THR LYS MET LYS ASN LYS SER VAL ILE ASN SEQRES 3 B 349 ILE ASP ASP VAL ASP ASP GLU GLU LEU LEU ALA ILE LEU SEQRES 4 B 349 TYR THR SER LYS GLN PHE GLU LYS ILE LEU LYS ASN ASN SEQRES 5 B 349 GLU ASP SER LYS TYR LEU GLU ASN LYS VAL PHE CYS SER SEQRES 6 B 349 VAL PHE LEU GLU PRO SER THR ARG THR ARG CYS SER PHE SEQRES 7 B 349 ASP ALA ALA ILE LEU LYS LEU GLY SER LYS VAL LEU ASN SEQRES 8 B 349 ILE THR ASP MET ASN SER THR SER PHE TYR LYS GLY GLU SEQRES 9 B 349 THR VAL GLU ASP ALA PHE LYS ILE LEU SER THR TYR VAL SEQRES 10 B 349 ASP GLY ILE ILE TYR ARG ASP PRO SER LYS LYS ASN VAL SEQRES 11 B 349 ASP ILE ALA VAL SER SER SER SER LYS PRO ILE ILE ASN SEQRES 12 B 349 ALA GLY ASN GLY THR GLY GLU HIS PRO THR GLN SER LEU SEQRES 13 B 349 LEU ASP PHE TYR THR ILE HIS ASN TYR PHE PRO PHE ILE SEQRES 14 B 349 LEU ASP ARG ASN ILE ASN LYS LYS LEU ASN ILE ALA PHE SEQRES 15 B 349 VAL GLY ASP LEU LYS ASN GLY ARG THR VAL HIS SER LEU SEQRES 16 B 349 SER LYS LEU LEU SER ARG TYR ASN VAL SER PHE ASN PHE SEQRES 17 B 349 VAL SER CYS LYS SER LEU ASN ILE PRO LYS ASP ILE VAL SEQRES 18 B 349 ASN THR ILE THR TYR ASN LEU LYS LYS ASN ASN PHE TYR SEQRES 19 B 349 SER ASP ASP SER ILE LYS TYR PHE ASP ASN LEU GLU GLU SEQRES 20 B 349 GLY LEU GLU ASP VAL HIS ILE ILE TYR MET THR ARG ILE SEQRES 21 B 349 GLN LYS GLU ARG PHE THR ASP VAL ASP GLU TYR ASN GLN SEQRES 22 B 349 TYR LYS ASN ALA PHE ILE LEU SER ASN LYS THR LEU GLU SEQRES 23 B 349 ASN THR ARG ASP ASP THR LYS ILE LEU HIS PRO LEU PRO SEQRES 24 B 349 ARG VAL ASN GLU ILE LYS VAL GLU VAL ASP SER ASN PRO SEQRES 25 B 349 LYS SER VAL TYR PHE THR GLN ALA GLU ASN GLY LEU TYR SEQRES 26 B 349 VAL ARG MET ALA LEU LEU TYR LEU ILE PHE SER SER THR SEQRES 27 B 349 SER SER ALA TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 C 349 MET PHE TYR ILE ASN SER LYS TYR LYS ILE ASP LEU ASP SEQRES 2 C 349 LYS ILE MET THR LYS MET LYS ASN LYS SER VAL ILE ASN SEQRES 3 C 349 ILE ASP ASP VAL ASP ASP GLU GLU LEU LEU ALA ILE LEU SEQRES 4 C 349 TYR THR SER LYS GLN PHE GLU LYS ILE LEU LYS ASN ASN SEQRES 5 C 349 GLU ASP SER LYS TYR LEU GLU ASN LYS VAL PHE CYS SER SEQRES 6 C 349 VAL PHE LEU GLU PRO SER THR ARG THR ARG CYS SER PHE SEQRES 7 C 349 ASP ALA ALA ILE LEU LYS LEU GLY SER LYS VAL LEU ASN SEQRES 8 C 349 ILE THR ASP MET ASN SER THR SER PHE TYR LYS GLY GLU SEQRES 9 C 349 THR VAL GLU ASP ALA PHE LYS ILE LEU SER THR TYR VAL SEQRES 10 C 349 ASP GLY ILE ILE TYR ARG ASP PRO SER LYS LYS ASN VAL SEQRES 11 C 349 ASP ILE ALA VAL SER SER SER SER LYS PRO ILE ILE ASN SEQRES 12 C 349 ALA GLY ASN GLY THR GLY GLU HIS PRO THR GLN SER LEU SEQRES 13 C 349 LEU ASP PHE TYR THR ILE HIS ASN TYR PHE PRO PHE ILE SEQRES 14 C 349 LEU ASP ARG ASN ILE ASN LYS LYS LEU ASN ILE ALA PHE SEQRES 15 C 349 VAL GLY ASP LEU LYS ASN GLY ARG THR VAL HIS SER LEU SEQRES 16 C 349 SER LYS LEU LEU SER ARG TYR ASN VAL SER PHE ASN PHE SEQRES 17 C 349 VAL SER CYS LYS SER LEU ASN ILE PRO LYS ASP ILE VAL SEQRES 18 C 349 ASN THR ILE THR TYR ASN LEU LYS LYS ASN ASN PHE TYR SEQRES 19 C 349 SER ASP ASP SER ILE LYS TYR PHE ASP ASN LEU GLU GLU SEQRES 20 C 349 GLY LEU GLU ASP VAL HIS ILE ILE TYR MET THR ARG ILE SEQRES 21 C 349 GLN LYS GLU ARG PHE THR ASP VAL ASP GLU TYR ASN GLN SEQRES 22 C 349 TYR LYS ASN ALA PHE ILE LEU SER ASN LYS THR LEU GLU SEQRES 23 C 349 ASN THR ARG ASP ASP THR LYS ILE LEU HIS PRO LEU PRO SEQRES 24 C 349 ARG VAL ASN GLU ILE LYS VAL GLU VAL ASP SER ASN PRO SEQRES 25 C 349 LYS SER VAL TYR PHE THR GLN ALA GLU ASN GLY LEU TYR SEQRES 26 C 349 VAL ARG MET ALA LEU LEU TYR LEU ILE PHE SER SER THR SEQRES 27 C 349 SER SER ALA TRP SER HIS PRO GLN PHE GLU LYS HET GOL A 401 6 HET GOL A 402 6 HET GOL B 401 6 HET SO4 C 401 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *86(H2 O) HELIX 1 AA1 ASP A 47 LYS A 56 1 10 HELIX 2 AA2 ASN A 62 VAL A 66 5 5 HELIX 3 AA3 ASP A 67 ASN A 87 1 21 HELIX 4 AA4 SER A 107 LEU A 121 1 15 HELIX 5 AA5 THR A 141 SER A 150 1 10 HELIX 6 AA6 SER A 162 SER A 173 1 12 HELIX 7 AA7 HIS A 187 PHE A 202 1 16 HELIX 8 AA8 PRO A 203 ASP A 207 5 5 HELIX 9 AA9 GLY A 225 SER A 236 1 12 HELIX 10 AB1 CYS A 247 ASN A 251 5 5 HELIX 11 AB2 PRO A 253 ASN A 267 1 15 HELIX 12 AB3 ASN A 280 LEU A 285 1 6 HELIX 13 AB4 LYS A 341 ASN A 347 5 7 HELIX 14 AB5 VAL A 351 SER A 372 1 22 HELIX 15 AB6 ASP B 47 LYS B 56 1 10 HELIX 16 AB7 ASN B 62 VAL B 66 5 5 HELIX 17 AB8 ASP B 67 ASN B 87 1 21 HELIX 18 AB9 SER B 107 LEU B 121 1 15 HELIX 19 AC1 THR B 141 SER B 150 1 10 HELIX 20 AC2 SER B 162 SER B 173 1 12 HELIX 21 AC3 HIS B 187 PHE B 202 1 16 HELIX 22 AC4 PRO B 203 ARG B 208 5 6 HELIX 23 AC5 GLY B 225 SER B 236 1 12 HELIX 24 AC6 CYS B 247 ASN B 251 5 5 HELIX 25 AC7 PRO B 253 ASN B 267 1 15 HELIX 26 AC8 ASN B 280 LEU B 285 1 6 HELIX 27 AC9 LYS B 341 ASN B 347 5 7 HELIX 28 AD1 VAL B 351 SER B 372 1 22 HELIX 29 AD2 ASP C 47 LYS C 56 1 10 HELIX 30 AD3 ASN C 62 VAL C 66 5 5 HELIX 31 AD4 ASP C 67 ASN C 87 1 21 HELIX 32 AD5 SER C 107 GLY C 122 1 16 HELIX 33 AD6 THR C 141 VAL C 153 1 13 HELIX 34 AD7 SER C 162 SER C 173 1 12 HELIX 35 AD8 HIS C 187 PHE C 202 1 16 HELIX 36 AD9 PRO C 203 ASP C 207 5 5 HELIX 37 AE1 GLY C 225 SER C 236 1 12 HELIX 38 AE2 CYS C 247 ASN C 251 5 5 HELIX 39 AE3 PRO C 253 ASN C 267 1 15 HELIX 40 AE4 ASN C 280 LEU C 285 1 6 HELIX 41 AE5 LYS C 341 ASN C 347 5 7 HELIX 42 AE6 VAL C 351 SER C 372 1 22 HELIX 43 AE7 SER C 376 HIS C 380 5 5 SHEET 1 AA1 4 LYS A 124 ILE A 128 0 SHEET 2 AA1 4 VAL A 98 PHE A 103 1 N PHE A 99 O LYS A 124 SHEET 3 AA1 4 GLY A 155 ASP A 160 1 O ILE A 157 N VAL A 102 SHEET 4 AA1 4 ILE A 177 ASN A 182 1 O ALA A 180 N TYR A 158 SHEET 1 AA2 5 ILE A 275 PHE A 278 0 SHEET 2 AA2 5 VAL A 240 VAL A 245 1 N PHE A 244 O LYS A 276 SHEET 3 AA2 5 LEU A 214 VAL A 219 1 N ILE A 216 O ASN A 243 SHEET 4 AA2 5 ILE A 290 MET A 293 1 O TYR A 292 N ALA A 217 SHEET 5 AA2 5 LYS A 329 LEU A 331 1 O LEU A 331 N ILE A 291 SHEET 1 AA3 4 LYS B 124 ILE B 128 0 SHEET 2 AA3 4 VAL B 98 PHE B 103 1 N PHE B 99 O LYS B 124 SHEET 3 AA3 4 GLY B 155 ASP B 160 1 O ILE B 157 N VAL B 102 SHEET 4 AA3 4 ILE B 177 ASN B 182 1 O ALA B 180 N TYR B 158 SHEET 1 AA4 5 ILE B 275 PHE B 278 0 SHEET 2 AA4 5 VAL B 240 VAL B 245 1 N PHE B 244 O LYS B 276 SHEET 3 AA4 5 LEU B 214 VAL B 219 1 N PHE B 218 O ASN B 243 SHEET 4 AA4 5 ILE B 290 MET B 293 1 O TYR B 292 N ALA B 217 SHEET 5 AA4 5 LYS B 329 LEU B 331 1 O LEU B 331 N MET B 293 SHEET 1 AA5 4 LYS C 124 ILE C 128 0 SHEET 2 AA5 4 VAL C 98 PHE C 103 1 N PHE C 99 O LYS C 124 SHEET 3 AA5 4 GLY C 155 ASP C 160 1 O ILE C 157 N VAL C 102 SHEET 4 AA5 4 ILE C 177 ASN C 182 1 O ALA C 180 N TYR C 158 SHEET 1 AA6 5 ILE C 275 PHE C 278 0 SHEET 2 AA6 5 VAL C 240 VAL C 245 1 N PHE C 242 O LYS C 276 SHEET 3 AA6 5 LEU C 214 VAL C 219 1 N ILE C 216 O SER C 241 SHEET 4 AA6 5 ILE C 290 MET C 293 1 O TYR C 292 N ALA C 217 SHEET 5 AA6 5 LYS C 329 LEU C 331 1 O LEU C 331 N MET C 293 CISPEP 1 LEU A 334 PRO A 335 0 -3.22 CISPEP 2 LEU B 334 PRO B 335 0 -1.98 CISPEP 3 SER B 373 THR B 374 0 -1.62 CISPEP 4 SER B 375 SER B 376 0 -3.03 CISPEP 5 LEU C 334 PRO C 335 0 -3.50 SITE 1 AC1 6 ASN A 57 SER A 59 VAL A 170 SER A 173 SITE 2 AC1 6 SER A 174 LYS A 175 SITE 1 AC2 2 ASP A 67 ASP A 68 SITE 1 AC3 8 VAL A 125 LYS B 124 VAL B 125 HOH B 501 SITE 2 AC3 8 VAL C 125 SO4 C 401 HOH C 503 HOH C 506 SITE 1 AC4 9 LEU A 119 LYS A 124 LEU B 119 LYS B 124 SITE 2 AC4 9 GOL B 401 LEU C 119 LYS C 124 HOH C 503 SITE 3 AC4 9 HOH C 506 CRYST1 86.980 103.800 87.110 90.00 117.68 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011497 0.000000 0.006031 0.00000 SCALE2 0.000000 0.009634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012963 0.00000