HEADER TRANSPORT PROTEIN 05-MAR-16 5IM2 TITLE CRYSTAL STRUCTURE OF A TRAP SOLUTE BINDING PROTEIN FROM RHODOFERAX TITLE 2 FERRIREDUCENS T118 (RFER_2570, TARGET EFI-510210) IN COMPLEX WITH TITLE 3 COPURIFIED BENZOATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWIN-ARGININE TRANSLOCATION PATHWAY SIGNAL; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOFERAX FERRIREDUCENS; SOURCE 3 ORGANISM_TAXID: 338969; SOURCE 4 STRAIN: ATCC BAA-621 / DSM 15236 / T118; SOURCE 5 GENE: RFER_2570; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ENZYME FUNCTION INITIATIVE, EFI, STRUCTURAL GENOMICS, TRANSPORT KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,J.BENACH,J.KOSS,S.R.WASSERMAN, AUTHOR 2 J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 2 27-SEP-23 5IM2 1 REMARK REVDAT 1 23-MAR-16 5IM2 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,J.BENACH,J.KOSS, JRNL AUTH 2 S.R.WASSERMAN,J.A.GERLT,S.C.ALMO, JRNL AUTH 3 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF A TRAP SOLUTE BINDING PROTEIN FROM JRNL TITL 2 RHODOFERAX FERRIREDUCENS T118 (RFER_2570, TARGET EFI-510210) JRNL TITL 3 IN COMPLEX WITH COPURIFIED BENZOATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 32360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.5718 - 3.8891 0.96 2626 148 0.1332 0.1733 REMARK 3 2 3.8891 - 3.0881 1.00 2627 145 0.1422 0.1812 REMARK 3 3 3.0881 - 2.6980 1.00 2586 130 0.1561 0.2219 REMARK 3 4 2.6980 - 2.4515 1.00 2567 133 0.1592 0.2043 REMARK 3 5 2.4515 - 2.2759 1.00 2576 131 0.1531 0.1752 REMARK 3 6 2.2759 - 2.1417 1.00 2546 136 0.1598 0.1808 REMARK 3 7 2.1417 - 2.0345 1.00 2563 123 0.1711 0.2233 REMARK 3 8 2.0345 - 1.9460 1.00 2544 132 0.1710 0.1980 REMARK 3 9 1.9460 - 1.8711 1.00 2518 136 0.1993 0.2216 REMARK 3 10 1.8711 - 1.8065 1.00 2529 149 0.2067 0.2851 REMARK 3 11 1.8065 - 1.7500 1.00 2531 134 0.2112 0.2929 REMARK 3 12 1.7500 - 1.7000 1.00 2504 146 0.2183 0.2481 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2580 REMARK 3 ANGLE : 0.979 3500 REMARK 3 CHIRALITY : 0.056 383 REMARK 3 PLANARITY : 0.008 453 REMARK 3 DIHEDRAL : 10.583 1548 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1005 -8.9445 75.3759 REMARK 3 T TENSOR REMARK 3 T11: 0.2793 T22: 0.1586 REMARK 3 T33: 0.1600 T12: -0.0040 REMARK 3 T13: -0.0954 T23: 0.0226 REMARK 3 L TENSOR REMARK 3 L11: 3.0198 L22: 3.1044 REMARK 3 L33: 1.4139 L12: -1.1080 REMARK 3 L13: -0.3332 L23: 0.7332 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: -0.0939 S13: -0.2564 REMARK 3 S21: 0.3836 S22: -0.0042 S23: -0.1017 REMARK 3 S31: 0.2131 S32: 0.0579 S33: 0.0194 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.5660 2.4101 66.2381 REMARK 3 T TENSOR REMARK 3 T11: 0.1203 T22: 0.1372 REMARK 3 T33: 0.1315 T12: -0.0098 REMARK 3 T13: -0.0437 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.0092 L22: 1.7488 REMARK 3 L33: 0.8205 L12: 0.1169 REMARK 3 L13: 0.2962 L23: 0.0172 REMARK 3 S TENSOR REMARK 3 S11: 0.0115 S12: 0.0151 S13: 0.0052 REMARK 3 S21: 0.1417 S22: -0.0332 S23: -0.2460 REMARK 3 S31: 0.0498 S32: 0.1375 S33: 0.0270 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7568 11.4560 74.6258 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1670 REMARK 3 T33: 0.1631 T12: -0.0017 REMARK 3 T13: 0.0279 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 2.0410 L22: 3.1914 REMARK 3 L33: 1.1270 L12: -0.9070 REMARK 3 L13: 0.2603 L23: 0.3775 REMARK 3 S TENSOR REMARK 3 S11: -0.1581 S12: -0.1912 S13: 0.0120 REMARK 3 S21: 0.4009 S22: 0.1203 S23: 0.2466 REMARK 3 S31: 0.0954 S32: -0.1753 S33: 0.0284 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6237 -8.0949 64.3922 REMARK 3 T TENSOR REMARK 3 T11: 0.1610 T22: 0.2114 REMARK 3 T33: 0.2330 T12: 0.0253 REMARK 3 T13: -0.0608 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 4.4973 L22: 1.8702 REMARK 3 L33: 1.5939 L12: -0.5622 REMARK 3 L13: 0.6630 L23: 0.2933 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: 0.1992 S13: -0.1086 REMARK 3 S21: 0.1097 S22: 0.0678 S23: -0.5916 REMARK 3 S31: 0.2746 S32: 0.3064 S33: -0.0979 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0329 -6.1689 70.2285 REMARK 3 T TENSOR REMARK 3 T11: 0.2016 T22: 0.1367 REMARK 3 T33: 0.1689 T12: -0.0500 REMARK 3 T13: -0.0137 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 5.6415 L22: 2.8347 REMARK 3 L33: 7.2229 L12: -0.9826 REMARK 3 L13: -4.7043 L23: 0.8357 REMARK 3 S TENSOR REMARK 3 S11: -0.1032 S12: -0.1357 S13: -0.3338 REMARK 3 S21: 0.3158 S22: 0.0067 S23: 0.3522 REMARK 3 S31: 0.2692 S32: -0.0871 S33: 0.1182 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 291 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9358 9.7716 67.2514 REMARK 3 T TENSOR REMARK 3 T11: 0.1699 T22: 0.2407 REMARK 3 T33: 0.2937 T12: 0.0089 REMARK 3 T13: 0.0156 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 3.7107 L22: 3.5552 REMARK 3 L33: 1.8332 L12: 1.0770 REMARK 3 L13: -0.8586 L23: -0.7762 REMARK 3 S TENSOR REMARK 3 S11: 0.0612 S12: 0.1884 S13: 0.0113 REMARK 3 S21: 0.2923 S22: -0.0185 S23: 0.7548 REMARK 3 S31: -0.3135 S32: -0.5778 S33: -0.0200 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.6645 9.1249 51.9535 REMARK 3 T TENSOR REMARK 3 T11: 0.1987 T22: 0.1781 REMARK 3 T33: 0.1316 T12: -0.0298 REMARK 3 T13: -0.0443 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 1.5648 L22: 1.5958 REMARK 3 L33: 2.2162 L12: 0.0159 REMARK 3 L13: -0.0045 L23: 0.0568 REMARK 3 S TENSOR REMARK 3 S11: -0.0975 S12: 0.1181 S13: 0.1646 REMARK 3 S21: -0.3372 S22: 0.0408 S23: -0.0182 REMARK 3 S31: -0.1139 S32: 0.0342 S33: 0.0530 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IM2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32423 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 28.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.71700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5I7I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 5 MM DTT, REMARK 280 10 MM 3,4-DIHYDROXYBENZOATE); RESERVOIR (MCSG1 D12, 0.2 M REMARK 280 AMMONIUM CHLORIDE PH 6.3, 20 %(W/V) PEG 3350); CRYOPROTECTION REMARK 280 (20% DIETHYLEN GLYCOL, 80% RESERVOIR), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.50700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.30150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.93200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.30150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.50700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.93200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 SER A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 LYS A 8 REMARK 465 THR A 9 REMARK 465 SER A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 LEU A 13 REMARK 465 ALA A 14 REMARK 465 LEU A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 PRO A 18 REMARK 465 ALA A 19 REMARK 465 PHE A 20 REMARK 465 SER A 21 REMARK 465 GLN A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 SER A 348 REMARK 465 PRO A 349 REMARK 465 ALA A 350 REMARK 465 SER A 351 REMARK 465 ALA A 352 REMARK 465 ILE A 353 REMARK 465 ALA A 354 REMARK 465 PRO A 355 REMARK 465 ALA A 356 REMARK 465 ILE A 357 REMARK 465 THR A 358 REMARK 465 ARG A 359 REMARK 465 PRO A 360 REMARK 465 LYS A 361 REMARK 465 LYS A 362 REMARK 465 THR A 363 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 525 O HOH A 702 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 114 -83.69 -92.21 REMARK 500 ALA A 131 48.85 -148.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEZ A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510210 RELATED DB: TARGETTRACK DBREF 5IM2 A 1 363 UNP Q21VB6 Q21VB6_RHOFT 1 363 SEQADV 5IM2 MET A -21 UNP Q21VB6 INITIATING METHIONINE SEQADV 5IM2 HIS A -20 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 HIS A -19 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 HIS A -18 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 HIS A -17 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 HIS A -16 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 HIS A -15 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 SER A -14 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 SER A -13 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 GLY A -12 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 VAL A -11 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 ASP A -10 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 LEU A -9 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 GLY A -8 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 THR A -7 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 GLU A -6 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 ASN A -5 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 LEU A -4 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 TYR A -3 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 PHE A -2 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 GLN A -1 UNP Q21VB6 EXPRESSION TAG SEQADV 5IM2 SER A 0 UNP Q21VB6 EXPRESSION TAG SEQRES 1 A 385 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 385 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLN ARG ARG SEQRES 3 A 385 SER LEU LEU LYS THR SER ALA ALA LEU ALA LEU THR ALA SEQRES 4 A 385 PRO ALA PHE SER GLN ALA ALA ALA THR VAL THR LEU LYS SEQRES 5 A 385 PHE HIS THR PHE MET ALA PRO GLN SER ASN VAL TRP GLN SEQRES 6 A 385 ASN MET HIS LYS VAL TRP MET ASP LYS VAL SER LYS GLU SEQRES 7 A 385 SER GLY GLY ARG ILE GLN PHE GLU ALA TYR PRO ALA MET SEQRES 8 A 385 GLN LEU GLY GLY SER PRO ALA GLN LEU TYR ASP GLN ALA SEQRES 9 A 385 LYS ASP GLY VAL VAL ASP ILE ILE TRP THR ILE PRO GLY SEQRES 10 A 385 TYR THR ALA GLY ARG PHE PRO ARG ILE GLU VAL PHE GLU SEQRES 11 A 385 LEU PRO PHE MET MET THR ASN ALA GLU ALA THR SER ARG SEQRES 12 A 385 ALA CYS TRP GLU TYR MET GLN THR MET ALA LEU ASP GLU SEQRES 13 A 385 PHE LYS ASP THR GLN VAL LEU ALA LEU GLN VAL HIS GLY SEQRES 14 A 385 PRO GLY VAL PHE HIS THR LYS ASP LYS GLN ILE LYS THR SEQRES 15 A 385 ALA ALA ASP LEU LYS GLY LEU LYS MET ARG GLY PRO THR SEQRES 16 A 385 ARG GLN VAL THR LYS MET LEU GLY TYR LEU GLY ALA ILE SEQRES 17 A 385 PRO VAL GLY MET PRO LEU PRO ALA ILE PRO ASP ALA LEU SEQRES 18 A 385 SER LYS GLY THR ILE ASP GLY ALA ALA LEU PRO TRP GLU SEQRES 19 A 385 VAL VAL PRO SER VAL LYS VAL HIS GLU LEU THR ARG PHE SEQRES 20 A 385 HIS SER GLU PHE ASP PRO ALA GLY GLY ALA LEU TYR THR SEQRES 21 A 385 ALA THR PHE VAL LEU ALA MET ASN LYS ALA SER TYR GLN SEQRES 22 A 385 ALA LEU PRO PRO ASP LEU ARG LYS ILE ILE ASP ASN ASN SEQRES 23 A 385 SER GLY LEU GLN THR SER GLY TRP LEU GLY ARG VAL GLN SEQRES 24 A 385 GLN ALA GLY ASP ALA ALA GLY ARG GLN ALA ALA LEU ALA SEQRES 25 A 385 HIS LYS ASN THR ILE TYR ALA ILE PRO ALA LEU GLU ALA SEQRES 26 A 385 GLN GLU PHE LYS ARG LYS ALA ALA VAL VAL GLU VAL ALA SEQRES 27 A 385 TRP VAL GLU ASP MET ASN GLN ARG GLY PHE ASP GLY ARG SEQRES 28 A 385 GLN LEU LEU THR THR ALA ARG ALA LEU ILE ALA LYS HIS SEQRES 29 A 385 SER LYS VAL ALA ALA SER PRO ALA SER ALA ILE ALA PRO SEQRES 30 A 385 ALA ILE THR ARG PRO LYS LYS THR HET BEZ A 401 14 HETNAM BEZ BENZOIC ACID FORMUL 2 BEZ C7 H6 O2 FORMUL 3 HOH *236(H2 O) HELIX 1 AA1 SER A 39 MET A 45 1 7 HELIX 2 AA2 MET A 45 SER A 57 1 13 HELIX 3 AA3 SER A 74 ALA A 76 5 3 HELIX 4 AA4 GLN A 77 ASP A 84 1 8 HELIX 5 AA5 ILE A 93 THR A 97 5 5 HELIX 6 AA6 PRO A 102 LEU A 109 5 8 HELIX 7 AA7 ASN A 115 ALA A 131 1 17 HELIX 8 AA8 LEU A 132 LYS A 136 5 5 HELIX 9 AA9 THR A 160 LYS A 165 5 6 HELIX 10 AB1 THR A 173 GLY A 184 1 12 HELIX 11 AB2 PRO A 191 PRO A 193 5 3 HELIX 12 AB3 ALA A 194 GLY A 202 1 9 HELIX 13 AB4 GLU A 212 VAL A 217 5 6 HELIX 14 AB5 LYS A 218 THR A 223 1 6 HELIX 15 AB6 PRO A 231 GLY A 234 5 4 HELIX 16 AB7 ASN A 246 ALA A 252 1 7 HELIX 17 AB8 PRO A 254 ASN A 264 1 11 HELIX 18 AB9 GLY A 266 GLY A 280 1 15 HELIX 19 AC1 GLY A 280 HIS A 291 1 12 HELIX 20 AC2 PRO A 299 ALA A 311 1 13 HELIX 21 AC3 ALA A 311 ARG A 324 1 14 HELIX 22 AC4 ASP A 327 ALA A 346 1 20 SHEET 1 AA1 5 ILE A 61 TYR A 66 0 SHEET 2 AA1 5 VAL A 27 HIS A 32 1 N VAL A 27 O GLN A 62 SHEET 3 AA1 5 ILE A 89 THR A 92 1 O ILE A 89 N LYS A 30 SHEET 4 AA1 5 THR A 240 MET A 245 -1 O VAL A 242 N THR A 92 SHEET 5 AA1 5 GLN A 139 VAL A 145 -1 N GLN A 139 O MET A 245 SHEET 1 AA2 6 ILE A 186 GLY A 189 0 SHEET 2 AA2 6 LYS A 168 GLY A 171 1 N GLY A 171 O VAL A 188 SHEET 3 AA2 6 GLY A 206 PRO A 210 1 O ALA A 208 N ARG A 170 SHEET 4 AA2 6 GLY A 149 THR A 153 -1 N HIS A 152 O ALA A 207 SHEET 5 AA2 6 PHE A 225 PHE A 229 -1 O SER A 227 N PHE A 151 SHEET 6 AA2 6 THR A 294 ILE A 298 1 O ILE A 298 N GLU A 228 SITE 1 AC1 9 ILE A 93 TYR A 96 ARG A 170 PRO A 172 SITE 2 AC1 9 LEU A 209 PRO A 210 GLU A 212 GLN A 277 SITE 3 AC1 9 HOH A 541 CRYST1 51.014 71.864 78.603 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019603 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013915 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012722 0.00000