data_5IPD # _entry.id 5IPD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.283 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5IPD WWPDB D_1000219176 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '1KPA contains the apo protein in a P212121 spacegroup' 1KPA unspecified PDB '3TW2 contains the same protein complexed with AMP in a C2 spacegroup' 3TW2 unspecified PDB '5I2E contains the same protein complexed with a sulfamate inhibitor in a C2 spacegroup' 5I2E unspecified PDB '512F contains the same protein complexed with a sulfamide inhibitor in a C2 spacegroup' 5I2F unspecified PDB '4EQE contains the same protein complexed with Lys-AMS in a C2 spacegroup' 4EQE unspecified PDB '4EQG contains the same protein complexed with Ala-AMS in a C2 spacegroup' 4EQG unspecified PDB '4EQH contains the same protein complexed with Trp-AMS in a C2 spacegroup' 4EQH unspecified PDB . 5IPB unspecified PDB . 5IPC unspecified PDB . 5IPE unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IPD _pdbx_database_status.recvd_initial_deposition_date 2016-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Maize, K.M.' 1 ? 'Finzel, B.C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 1520-4995 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 56 _citation.language ? _citation.page_first 3559 _citation.page_last 3570 _citation.title ;Caught before Released: Structural Mapping of the Reaction Trajectory for the Sofosbuvir Activating Enzyme, Human Histidine Triad Nucleotide Binding Protein 1 (hHint1). ; _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.7b00148 _citation.pdbx_database_id_PubMed 28691797 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Shah, R.' 1 primary 'Maize, K.M.' 2 primary 'Zhou, X.' 3 primary 'Finzel, B.C.' 4 primary 'Wagner, C.R.' 5 # _cell.entry_id 5IPD _cell.length_a 78.445 _cell.length_b 46.241 _cell.length_c 64.218 _cell.angle_alpha 90.00 _cell.angle_beta 94.78 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IPD _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histidine triad nucleotide-binding protein 1' 14096.188 2 3.-.-.- ? ? ? 2 non-polymer syn "5'-S-phosphono-5'-thioguanosine" 379.286 1 ? ? ? ? 3 water nat water 18.015 163 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Adenosine 5'-monophosphoramidase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAMADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHL MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHL MIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MET n 1 5 ALA n 1 6 ASP n 1 7 GLU n 1 8 ILE n 1 9 ALA n 1 10 LYS n 1 11 ALA n 1 12 GLN n 1 13 VAL n 1 14 ALA n 1 15 ARG n 1 16 PRO n 1 17 GLY n 1 18 GLY n 1 19 ASP n 1 20 THR n 1 21 ILE n 1 22 PHE n 1 23 GLY n 1 24 LYS n 1 25 ILE n 1 26 ILE n 1 27 ARG n 1 28 LYS n 1 29 GLU n 1 30 ILE n 1 31 PRO n 1 32 ALA n 1 33 LYS n 1 34 ILE n 1 35 ILE n 1 36 PHE n 1 37 GLU n 1 38 ASP n 1 39 ASP n 1 40 ARG n 1 41 CYS n 1 42 LEU n 1 43 ALA n 1 44 PHE n 1 45 HIS n 1 46 ASP n 1 47 ILE n 1 48 SER n 1 49 PRO n 1 50 GLN n 1 51 ALA n 1 52 PRO n 1 53 THR n 1 54 HIS n 1 55 PHE n 1 56 LEU n 1 57 VAL n 1 58 ILE n 1 59 PRO n 1 60 LYS n 1 61 LYS n 1 62 HIS n 1 63 ILE n 1 64 SER n 1 65 GLN n 1 66 ILE n 1 67 SER n 1 68 VAL n 1 69 ALA n 1 70 GLU n 1 71 ASP n 1 72 ASP n 1 73 ASP n 1 74 GLU n 1 75 SER n 1 76 LEU n 1 77 LEU n 1 78 GLY n 1 79 HIS n 1 80 LEU n 1 81 MET n 1 82 ILE n 1 83 VAL n 1 84 GLY n 1 85 LYS n 1 86 LYS n 1 87 CYS n 1 88 ALA n 1 89 ALA n 1 90 ASP n 1 91 LEU n 1 92 GLY n 1 93 LEU n 1 94 ASN n 1 95 LYS n 1 96 GLY n 1 97 TYR n 1 98 ARG n 1 99 MET n 1 100 VAL n 1 101 VAL n 1 102 ASN n 1 103 GLU n 1 104 GLY n 1 105 SER n 1 106 ASP n 1 107 GLY n 1 108 GLY n 1 109 GLN n 1 110 SER n 1 111 VAL n 1 112 TYR n 1 113 HIS n 1 114 VAL n 1 115 HIS n 1 116 LEU n 1 117 HIS n 1 118 VAL n 1 119 LEU n 1 120 GLY n 1 121 GLY n 1 122 ARG n 1 123 GLN n 1 124 MET n 1 125 HIS n 1 126 TRP n 1 127 PRO n 1 128 PRO n 1 129 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 129 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HINT1, HINT' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2 pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HINT1_HUMAN _struct_ref.pdbx_db_accession P49773 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIV GKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5IPD A 4 ? 129 ? P49773 1 ? 126 ? 1 126 2 1 5IPD B 4 ? 129 ? P49773 1 ? 126 ? 1 126 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5IPD SER A 1 ? UNP P49773 ? ? 'expression tag' -2 1 1 5IPD ASN A 2 ? UNP P49773 ? ? 'expression tag' -1 2 1 5IPD ALA A 3 ? UNP P49773 ? ? 'expression tag' 0 3 2 5IPD SER B 1 ? UNP P49773 ? ? 'expression tag' -2 4 2 5IPD ASN B 2 ? UNP P49773 ? ? 'expression tag' -1 5 2 5IPD ALA B 3 ? UNP P49773 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6CG non-polymer . "5'-S-phosphono-5'-thioguanosine" 'TrpGMPS hydrolysis product' 'C10 H14 N5 O7 P S' 379.286 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IPD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM MES, 34% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-18 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0000 1.0 2 1.000 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5IPD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 63.995 _reflns.d_resolution_high 1.750 _reflns.number_obs 22992 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.06300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.4000 _reflns.B_iso_Wilson_estimate 14.93 _reflns.pdbx_redundancy 3.200 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs 0.35300 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.20 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5IPD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 22987 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.80 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 98.6 _refine.ls_R_factor_obs 0.159 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.158 _refine.ls_R_factor_R_free 0.188 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.830 _refine.ls_number_reflns_R_free 1110 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 15.89 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.210 _refine.pdbx_overall_phase_error 20.350 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1756 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1942 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 39.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1847 'X-RAY DIFFRACTION' ? f_angle_d 0.935 ? ? 2509 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 10.213 ? ? 1090 'X-RAY DIFFRACTION' ? f_chiral_restr 0.060 ? ? 271 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 325 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.7500 1.8296 2657 0.2447 98.00 0.2975 . . 152 . . 'X-RAY DIFFRACTION' . 1.8296 1.9261 2744 0.1699 99.00 0.2046 . . 124 . . 'X-RAY DIFFRACTION' . 1.9261 2.0468 2745 0.1513 99.00 0.2036 . . 129 . . 'X-RAY DIFFRACTION' . 2.0468 2.2048 2754 0.1560 99.00 0.1952 . . 141 . . 'X-RAY DIFFRACTION' . 2.2048 2.4267 2730 0.1468 99.00 0.1926 . . 150 . . 'X-RAY DIFFRACTION' . 2.4267 2.7777 2762 0.1674 99.00 0.1969 . . 123 . . 'X-RAY DIFFRACTION' . 2.7777 3.4993 2748 0.1586 98.00 0.1828 . . 124 . . 'X-RAY DIFFRACTION' . 3.4993 39.8096 2737 0.1401 97.00 0.1579 . . 167 . . # _struct.entry_id 5IPD _struct.title 'Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) nucleoside thiophosphoramidate covalent intermediate complex' _struct.pdbx_descriptor 'Histidine triad nucleotide-binding protein 1 (E.C.3.-.-.-)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IPD _struct_keywords.text 'HINT, histidine triad, HIT, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 20 ? ARG A 27 ? THR A 17 ARG A 24 1 ? 8 HELX_P HELX_P2 AA2 GLN A 65 ? ALA A 69 ? GLN A 62 ALA A 66 5 ? 5 HELX_P HELX_P3 AA3 GLU A 70 ? ASP A 72 ? GLU A 67 ASP A 69 5 ? 3 HELX_P HELX_P4 AA4 ASP A 73 ? LEU A 91 ? ASP A 70 LEU A 88 1 ? 19 HELX_P HELX_P5 AA5 GLY A 104 ? GLY A 108 ? GLY A 101 GLY A 105 1 ? 5 HELX_P HELX_P6 AA6 THR B 20 ? ARG B 27 ? THR B 17 ARG B 24 1 ? 8 HELX_P HELX_P7 AA7 GLN B 65 ? ALA B 69 ? GLN B 62 ALA B 66 5 ? 5 HELX_P HELX_P8 AA8 GLU B 70 ? ASP B 72 ? GLU B 67 ASP B 69 5 ? 3 HELX_P HELX_P9 AA9 ASP B 73 ? LEU B 91 ? ASP B 70 LEU B 88 1 ? 19 HELX_P HELX_P10 AB1 GLY B 104 ? GLY B 108 ? GLY B 101 GLY B 105 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 115 _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id 6CG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id P _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 112 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 6CG _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.687 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TRP 126 A . ? TRP 123 A PRO 127 A ? PRO 124 A 1 -2.02 2 TRP 126 B . ? TRP 123 B PRO 127 B ? PRO 124 B 1 1.86 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 34 ? GLU A 37 ? ILE A 31 GLU A 34 AA1 2 CYS A 41 ? HIS A 45 ? CYS A 38 HIS A 42 AA1 3 THR A 53 ? PRO A 59 ? THR A 50 PRO A 56 AA1 4 LEU A 116 ? GLY A 120 ? LEU A 113 GLY A 117 AA1 5 TYR A 97 ? GLU A 103 ? TYR A 94 GLU A 100 AA1 6 TYR B 97 ? GLU B 103 ? TYR B 94 GLU B 100 AA1 7 LEU B 116 ? GLY B 120 ? LEU B 113 GLY B 117 AA1 8 THR B 53 ? PRO B 59 ? THR B 50 PRO B 56 AA1 9 CYS B 41 ? HIS B 45 ? CYS B 38 HIS B 42 AA1 10 ILE B 34 ? GLU B 37 ? ILE B 31 GLU B 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 35 ? N ILE A 32 O ALA A 43 ? O ALA A 40 AA1 2 3 N PHE A 44 ? N PHE A 41 O LEU A 56 ? O LEU A 53 AA1 3 4 N VAL A 57 ? N VAL A 54 O LEU A 116 ? O LEU A 113 AA1 4 5 O HIS A 117 ? O HIS A 114 N VAL A 100 ? N VAL A 97 AA1 5 6 N MET A 99 ? N MET A 96 O VAL B 101 ? O VAL B 98 AA1 6 7 N VAL B 100 ? N VAL B 97 O HIS B 117 ? O HIS B 114 AA1 7 8 O GLY B 120 ? O GLY B 117 N THR B 53 ? N THR B 50 AA1 8 9 O LEU B 56 ? O LEU B 53 N PHE B 44 ? N PHE B 41 AA1 9 10 O ALA B 43 ? O ALA B 40 N ILE B 35 ? N ILE B 32 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 6CG _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'binding site for residue 6CG A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ILE A 21 ? ILE A 18 . ? 1_555 ? 2 AC1 19 PHE A 22 ? PHE A 19 . ? 1_555 ? 3 AC1 19 PHE A 44 ? PHE A 41 . ? 1_555 ? 4 AC1 19 HIS A 45 ? HIS A 42 . ? 1_555 ? 5 AC1 19 ASP A 46 ? ASP A 43 . ? 1_555 ? 6 AC1 19 ILE A 47 ? ILE A 44 . ? 1_555 ? 7 AC1 19 ASN A 102 ? ASN A 99 . ? 1_555 ? 8 AC1 19 GLN A 109 ? GLN A 106 . ? 1_555 ? 9 AC1 19 SER A 110 ? SER A 107 . ? 1_555 ? 10 AC1 19 VAL A 111 ? VAL A 108 . ? 1_555 ? 11 AC1 19 HIS A 115 ? HIS A 112 . ? 1_555 ? 12 AC1 19 HIS A 117 ? HIS A 114 . ? 1_555 ? 13 AC1 19 HOH D . ? HOH A 302 . ? 1_555 ? 14 AC1 19 HOH D . ? HOH A 326 . ? 1_555 ? 15 AC1 19 HOH D . ? HOH A 327 . ? 1_555 ? 16 AC1 19 HOH D . ? HOH A 328 . ? 1_555 ? 17 AC1 19 HOH D . ? HOH A 335 . ? 1_555 ? 18 AC1 19 HOH D . ? HOH A 339 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH A 348 . ? 1_555 ? # _atom_sites.entry_id 5IPD _atom_sites.fract_transf_matrix[1][1] 0.012748 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001066 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021626 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015626 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 ALA 5 2 ? ? ? A . n A 1 6 ASP 6 3 ? ? ? A . n A 1 7 GLU 7 4 ? ? ? A . n A 1 8 ILE 8 5 ? ? ? A . n A 1 9 ALA 9 6 ? ? ? A . n A 1 10 LYS 10 7 ? ? ? A . n A 1 11 ALA 11 8 ? ? ? A . n A 1 12 GLN 12 9 ? ? ? A . n A 1 13 VAL 13 10 ? ? ? A . n A 1 14 ALA 14 11 ? ? ? A . n A 1 15 ARG 15 12 12 ARG ARG A . n A 1 16 PRO 16 13 13 PRO PRO A . n A 1 17 GLY 17 14 14 GLY GLY A . n A 1 18 GLY 18 15 15 GLY GLY A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 THR 20 17 17 THR THR A . n A 1 21 ILE 21 18 18 ILE ILE A . n A 1 22 PHE 22 19 19 PHE PHE A . n A 1 23 GLY 23 20 20 GLY GLY A . n A 1 24 LYS 24 21 21 LYS LYS A . n A 1 25 ILE 25 22 22 ILE ILE A . n A 1 26 ILE 26 23 23 ILE ILE A . n A 1 27 ARG 27 24 24 ARG ARG A . n A 1 28 LYS 28 25 25 LYS LYS A . n A 1 29 GLU 29 26 26 GLU GLU A . n A 1 30 ILE 30 27 27 ILE ILE A . n A 1 31 PRO 31 28 28 PRO PRO A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 ILE 34 31 31 ILE ILE A . n A 1 35 ILE 35 32 32 ILE ILE A . n A 1 36 PHE 36 33 33 PHE PHE A . n A 1 37 GLU 37 34 34 GLU GLU A . n A 1 38 ASP 38 35 35 ASP ASP A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 ARG 40 37 37 ARG ARG A . n A 1 41 CYS 41 38 38 CYS CYS A . n A 1 42 LEU 42 39 39 LEU LEU A . n A 1 43 ALA 43 40 40 ALA ALA A . n A 1 44 PHE 44 41 41 PHE PHE A . n A 1 45 HIS 45 42 42 HIS HIS A . n A 1 46 ASP 46 43 43 ASP ASP A . n A 1 47 ILE 47 44 44 ILE ILE A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 PRO 49 46 46 PRO PRO A . n A 1 50 GLN 50 47 47 GLN GLN A . n A 1 51 ALA 51 48 48 ALA ALA A . n A 1 52 PRO 52 49 49 PRO PRO A . n A 1 53 THR 53 50 50 THR THR A . n A 1 54 HIS 54 51 51 HIS HIS A . n A 1 55 PHE 55 52 52 PHE PHE A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 ILE 58 55 55 ILE ILE A . n A 1 59 PRO 59 56 56 PRO PRO A . n A 1 60 LYS 60 57 57 LYS LYS A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 HIS 62 59 59 HIS HIS A . n A 1 63 ILE 63 60 60 ILE ILE A . n A 1 64 SER 64 61 61 SER SER A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 ILE 66 63 63 ILE ILE A . n A 1 67 SER 67 64 64 SER SER A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ALA 69 66 66 ALA ALA A . n A 1 70 GLU 70 67 67 GLU GLU A . n A 1 71 ASP 71 68 68 ASP ASP A . n A 1 72 ASP 72 69 69 ASP ASP A . n A 1 73 ASP 73 70 70 ASP ASP A . n A 1 74 GLU 74 71 71 GLU GLU A . n A 1 75 SER 75 72 72 SER SER A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 GLY 78 75 75 GLY GLY A . n A 1 79 HIS 79 76 76 HIS HIS A . n A 1 80 LEU 80 77 77 LEU LEU A . n A 1 81 MET 81 78 78 MET MET A . n A 1 82 ILE 82 79 79 ILE ILE A . n A 1 83 VAL 83 80 80 VAL VAL A . n A 1 84 GLY 84 81 81 GLY GLY A . n A 1 85 LYS 85 82 82 LYS LYS A . n A 1 86 LYS 86 83 83 LYS LYS A . n A 1 87 CYS 87 84 84 CYS CYS A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 ALA 89 86 86 ALA ALA A . n A 1 90 ASP 90 87 87 ASP ASP A . n A 1 91 LEU 91 88 88 LEU LEU A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 LEU 93 90 90 LEU LEU A . n A 1 94 ASN 94 91 91 ASN ASN A . n A 1 95 LYS 95 92 92 LYS LYS A . n A 1 96 GLY 96 93 93 GLY GLY A . n A 1 97 TYR 97 94 94 TYR TYR A . n A 1 98 ARG 98 95 95 ARG ARG A . n A 1 99 MET 99 96 96 MET MET A . n A 1 100 VAL 100 97 97 VAL VAL A . n A 1 101 VAL 101 98 98 VAL VAL A . n A 1 102 ASN 102 99 99 ASN ASN A . n A 1 103 GLU 103 100 100 GLU GLU A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 SER 105 102 102 SER SER A . n A 1 106 ASP 106 103 103 ASP ASP A . n A 1 107 GLY 107 104 104 GLY GLY A . n A 1 108 GLY 108 105 105 GLY GLY A . n A 1 109 GLN 109 106 106 GLN GLN A . n A 1 110 SER 110 107 107 SER SER A . n A 1 111 VAL 111 108 108 VAL VAL A . n A 1 112 TYR 112 109 109 TYR TYR A . n A 1 113 HIS 113 110 110 HIS HIS A . n A 1 114 VAL 114 111 111 VAL VAL A . n A 1 115 HIS 115 112 112 HIS HIS A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 HIS 117 114 114 HIS HIS A . n A 1 118 VAL 118 115 115 VAL VAL A . n A 1 119 LEU 119 116 116 LEU LEU A . n A 1 120 GLY 120 117 117 GLY GLY A . n A 1 121 GLY 121 118 118 GLY GLY A . n A 1 122 ARG 122 119 119 ARG ARG A . n A 1 123 GLN 123 120 120 GLN GLN A . n A 1 124 MET 124 121 121 MET MET A . n A 1 125 HIS 125 122 122 HIS HIS A . n A 1 126 TRP 126 123 123 TRP TRP A . n A 1 127 PRO 127 124 124 PRO PRO A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 GLY 129 126 126 GLY GLY A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 ASN 2 -1 ? ? ? B . n B 1 3 ALA 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 ALA 5 2 ? ? ? B . n B 1 6 ASP 6 3 ? ? ? B . n B 1 7 GLU 7 4 ? ? ? B . n B 1 8 ILE 8 5 ? ? ? B . n B 1 9 ALA 9 6 ? ? ? B . n B 1 10 LYS 10 7 ? ? ? B . n B 1 11 ALA 11 8 ? ? ? B . n B 1 12 GLN 12 9 ? ? ? B . n B 1 13 VAL 13 10 ? ? ? B . n B 1 14 ALA 14 11 ? ? ? B . n B 1 15 ARG 15 12 ? ? ? B . n B 1 16 PRO 16 13 ? ? ? B . n B 1 17 GLY 17 14 14 GLY GLY B . n B 1 18 GLY 18 15 15 GLY GLY B . n B 1 19 ASP 19 16 16 ASP ASP B . n B 1 20 THR 20 17 17 THR THR B . n B 1 21 ILE 21 18 18 ILE ILE B . n B 1 22 PHE 22 19 19 PHE PHE B . n B 1 23 GLY 23 20 20 GLY GLY B . n B 1 24 LYS 24 21 21 LYS LYS B . n B 1 25 ILE 25 22 22 ILE ILE B . n B 1 26 ILE 26 23 23 ILE ILE B . n B 1 27 ARG 27 24 24 ARG ARG B . n B 1 28 LYS 28 25 25 LYS LYS B . n B 1 29 GLU 29 26 26 GLU GLU B . n B 1 30 ILE 30 27 27 ILE ILE B . n B 1 31 PRO 31 28 28 PRO PRO B . n B 1 32 ALA 32 29 29 ALA ALA B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 ILE 34 31 31 ILE ILE B . n B 1 35 ILE 35 32 32 ILE ILE B . n B 1 36 PHE 36 33 33 PHE PHE B . n B 1 37 GLU 37 34 34 GLU GLU B . n B 1 38 ASP 38 35 35 ASP ASP B . n B 1 39 ASP 39 36 36 ASP ASP B . n B 1 40 ARG 40 37 37 ARG ARG B . n B 1 41 CYS 41 38 38 CYS CYS B . n B 1 42 LEU 42 39 39 LEU LEU B . n B 1 43 ALA 43 40 40 ALA ALA B . n B 1 44 PHE 44 41 41 PHE PHE B . n B 1 45 HIS 45 42 42 HIS HIS B . n B 1 46 ASP 46 43 43 ASP ASP B . n B 1 47 ILE 47 44 44 ILE ILE B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 PRO 49 46 46 PRO PRO B . n B 1 50 GLN 50 47 47 GLN GLN B . n B 1 51 ALA 51 48 48 ALA ALA B . n B 1 52 PRO 52 49 49 PRO PRO B . n B 1 53 THR 53 50 50 THR THR B . n B 1 54 HIS 54 51 51 HIS HIS B . n B 1 55 PHE 55 52 52 PHE PHE B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 VAL 57 54 54 VAL VAL B . n B 1 58 ILE 58 55 55 ILE ILE B . n B 1 59 PRO 59 56 56 PRO PRO B . n B 1 60 LYS 60 57 57 LYS LYS B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 HIS 62 59 59 HIS HIS B . n B 1 63 ILE 63 60 60 ILE ILE B . n B 1 64 SER 64 61 61 SER SER B . n B 1 65 GLN 65 62 62 GLN GLN B . n B 1 66 ILE 66 63 63 ILE ILE B . n B 1 67 SER 67 64 64 SER SER B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 ALA 69 66 66 ALA ALA B . n B 1 70 GLU 70 67 67 GLU GLU B . n B 1 71 ASP 71 68 68 ASP ASP B . n B 1 72 ASP 72 69 69 ASP ASP B . n B 1 73 ASP 73 70 70 ASP ASP B . n B 1 74 GLU 74 71 71 GLU GLU B . n B 1 75 SER 75 72 72 SER SER B . n B 1 76 LEU 76 73 73 LEU LEU B . n B 1 77 LEU 77 74 74 LEU LEU B . n B 1 78 GLY 78 75 75 GLY GLY B . n B 1 79 HIS 79 76 76 HIS HIS B . n B 1 80 LEU 80 77 77 LEU LEU B . n B 1 81 MET 81 78 78 MET MET B . n B 1 82 ILE 82 79 79 ILE ILE B . n B 1 83 VAL 83 80 80 VAL VAL B . n B 1 84 GLY 84 81 81 GLY GLY B . n B 1 85 LYS 85 82 82 LYS LYS B . n B 1 86 LYS 86 83 83 LYS LYS B . n B 1 87 CYS 87 84 84 CYS CYS B . n B 1 88 ALA 88 85 85 ALA ALA B . n B 1 89 ALA 89 86 86 ALA ALA B . n B 1 90 ASP 90 87 87 ASP ASP B . n B 1 91 LEU 91 88 88 LEU LEU B . n B 1 92 GLY 92 89 89 GLY GLY B . n B 1 93 LEU 93 90 90 LEU LEU B . n B 1 94 ASN 94 91 91 ASN ASN B . n B 1 95 LYS 95 92 92 LYS LYS B . n B 1 96 GLY 96 93 93 GLY GLY B . n B 1 97 TYR 97 94 94 TYR TYR B . n B 1 98 ARG 98 95 95 ARG ARG B . n B 1 99 MET 99 96 96 MET MET B . n B 1 100 VAL 100 97 97 VAL VAL B . n B 1 101 VAL 101 98 98 VAL VAL B . n B 1 102 ASN 102 99 99 ASN ASN B . n B 1 103 GLU 103 100 100 GLU GLU B . n B 1 104 GLY 104 101 101 GLY GLY B . n B 1 105 SER 105 102 102 SER SER B . n B 1 106 ASP 106 103 103 ASP ASP B . n B 1 107 GLY 107 104 104 GLY GLY B . n B 1 108 GLY 108 105 105 GLY GLY B . n B 1 109 GLN 109 106 106 GLN GLN B . n B 1 110 SER 110 107 107 SER SER B . n B 1 111 VAL 111 108 108 VAL VAL B . n B 1 112 TYR 112 109 109 TYR TYR B . n B 1 113 HIS 113 110 110 HIS HIS B . n B 1 114 VAL 114 111 111 VAL VAL B . n B 1 115 HIS 115 112 112 HIS HIS B . n B 1 116 LEU 116 113 113 LEU LEU B . n B 1 117 HIS 117 114 114 HIS HIS B . n B 1 118 VAL 118 115 115 VAL VAL B . n B 1 119 LEU 119 116 116 LEU LEU B . n B 1 120 GLY 120 117 117 GLY GLY B . n B 1 121 GLY 121 118 118 GLY GLY B . n B 1 122 ARG 122 119 119 ARG ARG B . n B 1 123 GLN 123 120 120 GLN GLN B . n B 1 124 MET 124 121 121 MET MET B . n B 1 125 HIS 125 122 122 HIS HIS B . n B 1 126 TRP 126 123 123 TRP TRP B . n B 1 127 PRO 127 124 124 PRO PRO B . n B 1 128 PRO 128 125 125 PRO PRO B . n B 1 129 GLY 129 126 126 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6CG 1 201 312 6CG 6CG A . D 3 HOH 1 301 201 HOH HOH A . D 3 HOH 2 302 202 HOH HOH A . D 3 HOH 3 303 203 HOH HOH A . D 3 HOH 4 304 204 HOH HOH A . D 3 HOH 5 305 205 HOH HOH A . D 3 HOH 6 306 206 HOH HOH A . D 3 HOH 7 307 207 HOH HOH A . D 3 HOH 8 308 208 HOH HOH A . D 3 HOH 9 309 209 HOH HOH A . D 3 HOH 10 310 210 HOH HOH A . D 3 HOH 11 311 211 HOH HOH A . D 3 HOH 12 312 212 HOH HOH A . D 3 HOH 13 313 213 HOH HOH A . D 3 HOH 14 314 214 HOH HOH A . D 3 HOH 15 315 215 HOH HOH A . D 3 HOH 16 316 216 HOH HOH A . D 3 HOH 17 317 217 HOH HOH A . D 3 HOH 18 318 218 HOH HOH A . D 3 HOH 19 319 219 HOH HOH A . D 3 HOH 20 320 220 HOH HOH A . D 3 HOH 21 321 221 HOH HOH A . D 3 HOH 22 322 222 HOH HOH A . D 3 HOH 23 323 223 HOH HOH A . D 3 HOH 24 324 224 HOH HOH A . D 3 HOH 25 325 225 HOH HOH A . D 3 HOH 26 326 226 HOH HOH A . D 3 HOH 27 327 227 HOH HOH A . D 3 HOH 28 328 228 HOH HOH A . D 3 HOH 29 329 229 HOH HOH A . D 3 HOH 30 330 230 HOH HOH A . D 3 HOH 31 331 231 HOH HOH A . D 3 HOH 32 332 232 HOH HOH A . D 3 HOH 33 333 233 HOH HOH A . D 3 HOH 34 334 234 HOH HOH A . D 3 HOH 35 335 235 HOH HOH A . D 3 HOH 36 336 236 HOH HOH A . D 3 HOH 37 337 237 HOH HOH A . D 3 HOH 38 338 238 HOH HOH A . D 3 HOH 39 339 239 HOH HOH A . D 3 HOH 40 340 240 HOH HOH A . D 3 HOH 41 341 241 HOH HOH A . D 3 HOH 42 342 242 HOH HOH A . D 3 HOH 43 343 243 HOH HOH A . D 3 HOH 44 344 244 HOH HOH A . D 3 HOH 45 345 245 HOH HOH A . D 3 HOH 46 346 246 HOH HOH A . D 3 HOH 47 347 247 HOH HOH A . D 3 HOH 48 348 248 HOH HOH A . D 3 HOH 49 349 249 HOH HOH A . D 3 HOH 50 350 250 HOH HOH A . D 3 HOH 51 351 251 HOH HOH A . D 3 HOH 52 352 252 HOH HOH A . D 3 HOH 53 353 253 HOH HOH A . D 3 HOH 54 354 254 HOH HOH A . D 3 HOH 55 355 255 HOH HOH A . D 3 HOH 56 356 256 HOH HOH A . D 3 HOH 57 357 257 HOH HOH A . D 3 HOH 58 358 258 HOH HOH A . D 3 HOH 59 359 259 HOH HOH A . D 3 HOH 60 360 260 HOH HOH A . D 3 HOH 61 361 261 HOH HOH A . D 3 HOH 62 362 262 HOH HOH A . D 3 HOH 63 363 263 HOH HOH A . D 3 HOH 64 364 264 HOH HOH A . D 3 HOH 65 365 265 HOH HOH A . D 3 HOH 66 366 266 HOH HOH A . D 3 HOH 67 367 267 HOH HOH A . D 3 HOH 68 368 268 HOH HOH A . D 3 HOH 69 369 269 HOH HOH A . D 3 HOH 70 370 270 HOH HOH A . D 3 HOH 71 371 271 HOH HOH A . D 3 HOH 72 372 272 HOH HOH A . D 3 HOH 73 373 273 HOH HOH A . D 3 HOH 74 374 274 HOH HOH A . D 3 HOH 75 375 275 HOH HOH A . D 3 HOH 76 376 276 HOH HOH A . D 3 HOH 77 377 277 HOH HOH A . D 3 HOH 78 378 278 HOH HOH A . D 3 HOH 79 379 279 HOH HOH A . D 3 HOH 80 380 280 HOH HOH A . D 3 HOH 81 381 281 HOH HOH A . D 3 HOH 82 382 282 HOH HOH A . D 3 HOH 83 383 283 HOH HOH A . D 3 HOH 84 384 284 HOH HOH A . D 3 HOH 85 385 285 HOH HOH A . D 3 HOH 86 386 286 HOH HOH A . D 3 HOH 87 387 287 HOH HOH A . D 3 HOH 88 388 288 HOH HOH A . D 3 HOH 89 389 289 HOH HOH A . D 3 HOH 90 390 290 HOH HOH A . D 3 HOH 91 391 291 HOH HOH A . D 3 HOH 92 392 292 HOH HOH A . E 3 HOH 1 201 201 HOH HOH B . E 3 HOH 2 202 202 HOH HOH B . E 3 HOH 3 203 203 HOH HOH B . E 3 HOH 4 204 204 HOH HOH B . E 3 HOH 5 205 205 HOH HOH B . E 3 HOH 6 206 206 HOH HOH B . E 3 HOH 7 207 207 HOH HOH B . E 3 HOH 8 208 208 HOH HOH B . E 3 HOH 9 209 209 HOH HOH B . E 3 HOH 10 210 210 HOH HOH B . E 3 HOH 11 211 211 HOH HOH B . E 3 HOH 12 212 212 HOH HOH B . E 3 HOH 13 213 213 HOH HOH B . E 3 HOH 14 214 214 HOH HOH B . E 3 HOH 15 215 215 HOH HOH B . E 3 HOH 16 216 216 HOH HOH B . E 3 HOH 17 217 217 HOH HOH B . E 3 HOH 18 218 218 HOH HOH B . E 3 HOH 19 219 219 HOH HOH B . E 3 HOH 20 220 220 HOH HOH B . E 3 HOH 21 221 221 HOH HOH B . E 3 HOH 22 222 222 HOH HOH B . E 3 HOH 23 223 223 HOH HOH B . E 3 HOH 24 224 224 HOH HOH B . E 3 HOH 25 225 225 HOH HOH B . E 3 HOH 26 226 226 HOH HOH B . E 3 HOH 27 227 227 HOH HOH B . E 3 HOH 28 228 228 HOH HOH B . E 3 HOH 29 229 229 HOH HOH B . E 3 HOH 30 230 230 HOH HOH B . E 3 HOH 31 231 231 HOH HOH B . E 3 HOH 32 232 232 HOH HOH B . E 3 HOH 33 233 233 HOH HOH B . E 3 HOH 34 234 234 HOH HOH B . E 3 HOH 35 235 235 HOH HOH B . E 3 HOH 36 236 236 HOH HOH B . E 3 HOH 37 237 237 HOH HOH B . E 3 HOH 38 238 238 HOH HOH B . E 3 HOH 39 239 239 HOH HOH B . E 3 HOH 40 240 240 HOH HOH B . E 3 HOH 41 241 241 HOH HOH B . E 3 HOH 42 242 242 HOH HOH B . E 3 HOH 43 243 243 HOH HOH B . E 3 HOH 44 244 244 HOH HOH B . E 3 HOH 45 245 245 HOH HOH B . E 3 HOH 46 246 246 HOH HOH B . E 3 HOH 47 247 247 HOH HOH B . E 3 HOH 48 248 248 HOH HOH B . E 3 HOH 49 249 249 HOH HOH B . E 3 HOH 50 250 250 HOH HOH B . E 3 HOH 51 251 251 HOH HOH B . E 3 HOH 52 252 252 HOH HOH B . E 3 HOH 53 253 253 HOH HOH B . E 3 HOH 54 254 254 HOH HOH B . E 3 HOH 55 255 255 HOH HOH B . E 3 HOH 56 256 256 HOH HOH B . E 3 HOH 57 257 257 HOH HOH B . E 3 HOH 58 258 258 HOH HOH B . E 3 HOH 59 259 259 HOH HOH B . E 3 HOH 60 260 260 HOH HOH B . E 3 HOH 61 261 261 HOH HOH B . E 3 HOH 62 262 262 HOH HOH B . E 3 HOH 63 263 263 HOH HOH B . E 3 HOH 64 264 264 HOH HOH B . E 3 HOH 65 265 265 HOH HOH B . E 3 HOH 66 266 266 HOH HOH B . E 3 HOH 67 267 267 HOH HOH B . E 3 HOH 68 268 268 HOH HOH B . E 3 HOH 69 269 269 HOH HOH B . E 3 HOH 70 270 270 HOH HOH B . E 3 HOH 71 271 271 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3850 ? 1 MORE -16 ? 1 'SSA (A^2)' 9400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 264 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-03-15 2 'Structure model' 1 1 2017-07-05 3 'Structure model' 1 2 2017-07-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.pdbx_database_id_DOI' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation.year' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 5IPD _pdbx_entry_details.nonpolymer_details ;The small molecule soaked into this crystal can only penetrate chain A due to crystallographic packing interactions. The activity of the enzyme makes a covalent intermediate at residue 112, chain A, but not chain B. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.source_details ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 112 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 112 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.426 _pdbx_validate_rmsd_bond.bond_target_value 1.354 _pdbx_validate_rmsd_bond.bond_deviation 0.072 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 16 ? ? -92.97 37.31 2 1 ASP B 35 ? ? -137.92 -158.71 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 12 ? CG ? A ARG 15 CG 2 1 Y 1 A ARG 12 ? CD ? A ARG 15 CD 3 1 Y 1 A ARG 12 ? NE ? A ARG 15 NE 4 1 Y 1 A ARG 12 ? CZ ? A ARG 15 CZ 5 1 Y 1 A ARG 12 ? NH1 ? A ARG 15 NH1 6 1 Y 1 A ARG 12 ? NH2 ? A ARG 15 NH2 7 1 Y 1 B LYS 30 ? CG ? B LYS 33 CG 8 1 Y 1 B LYS 30 ? CD ? B LYS 33 CD 9 1 Y 1 B LYS 30 ? CE ? B LYS 33 CE 10 1 Y 1 B LYS 30 ? NZ ? B LYS 33 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A ALA 0 ? A ALA 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A ALA 2 ? A ALA 5 6 1 Y 1 A ASP 3 ? A ASP 6 7 1 Y 1 A GLU 4 ? A GLU 7 8 1 Y 1 A ILE 5 ? A ILE 8 9 1 Y 1 A ALA 6 ? A ALA 9 10 1 Y 1 A LYS 7 ? A LYS 10 11 1 Y 1 A ALA 8 ? A ALA 11 12 1 Y 1 A GLN 9 ? A GLN 12 13 1 Y 1 A VAL 10 ? A VAL 13 14 1 Y 1 A ALA 11 ? A ALA 14 15 1 Y 1 B SER -2 ? B SER 1 16 1 Y 1 B ASN -1 ? B ASN 2 17 1 Y 1 B ALA 0 ? B ALA 3 18 1 Y 1 B MET 1 ? B MET 4 19 1 Y 1 B ALA 2 ? B ALA 5 20 1 Y 1 B ASP 3 ? B ASP 6 21 1 Y 1 B GLU 4 ? B GLU 7 22 1 Y 1 B ILE 5 ? B ILE 8 23 1 Y 1 B ALA 6 ? B ALA 9 24 1 Y 1 B LYS 7 ? B LYS 10 25 1 Y 1 B ALA 8 ? B ALA 11 26 1 Y 1 B GLN 9 ? B GLN 12 27 1 Y 1 B VAL 10 ? B VAL 13 28 1 Y 1 B ALA 11 ? B ALA 14 29 1 Y 1 B ARG 12 ? B ARG 15 30 1 Y 1 B PRO 13 ? B PRO 16 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "5'-S-phosphono-5'-thioguanosine" 6CG 3 water HOH #