data_5IWJ # _entry.id 5IWJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5IWJ pdb_00005iwj 10.2210/pdb5iwj/pdb WWPDB D_1000219566 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-04-05 2 'Structure model' 1 1 2017-08-30 3 'Structure model' 1 2 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 8 3 'Structure model' '_pdbx_struct_conn_angle.value' 9 3 'Structure model' '_struct_conn.pdbx_dist_value' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IWJ _pdbx_database_status.recvd_initial_deposition_date 2016-03-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Souter, J.E.' 1 'Hall, J.P.' 2 'Cardin, C.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The binding specificity of RuTAP2dppz' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Souter, J.E.' 1 ? primary 'Hall, J.P.' 2 ? primary 'Gurung, S.P.' 3 ? primary 'Brazier, J.A.' 4 ? primary 'Cardin, C.J.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3') ; 3046.980 1 ? ? ? ? 2 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ? 3 non-polymer syn 'Ru(tap)2(dppz) complex' 747.732 1 ? ? ? ? 4 water nat water 18.015 30 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DG)(DC)(DC)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGGGCCCGG _entity_poly.pdbx_strand_id C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BARIUM ION' BA 3 'Ru(tap)2(dppz) complex' RKL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DC n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 RKL non-polymer . 'Ru(tap)2(dppz) complex' ? 'C38 H22 N12 Ru 2' 747.732 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC C . n A 1 2 DC 2 2 2 DC DC C . n A 1 3 DG 3 3 3 DG DG C . n A 1 4 DG 4 4 4 DG DG C . n A 1 5 DG 5 5 5 DG DG C . n A 1 6 DC 6 6 6 DC DC C . n A 1 7 DC 7 7 7 DC DC C . n A 1 8 DC 8 8 8 DC DC C . n A 1 9 DG 9 9 9 DG DG C . n A 1 10 DG 10 10 10 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BA 1 101 3 BA BA C . C 3 RKL 1 102 11 RKL RKL C . D 4 HOH 1 201 43 HOH HOH C . D 4 HOH 2 202 29 HOH HOH C . D 4 HOH 3 203 16 HOH HOH C . D 4 HOH 4 204 21 HOH HOH C . D 4 HOH 5 205 9 HOH HOH C . D 4 HOH 6 206 7 HOH HOH C . D 4 HOH 7 207 20 HOH HOH C . D 4 HOH 8 208 51 HOH HOH C . D 4 HOH 9 209 28 HOH HOH C . D 4 HOH 10 210 40 HOH HOH C . D 4 HOH 11 211 4 HOH HOH C . D 4 HOH 12 212 55 HOH HOH C . D 4 HOH 13 213 36 HOH HOH C . D 4 HOH 14 214 33 HOH HOH C . D 4 HOH 15 215 6 HOH HOH C . D 4 HOH 16 216 3 HOH HOH C . D 4 HOH 17 217 38 HOH HOH C . D 4 HOH 18 218 60 HOH HOH C . D 4 HOH 19 219 39 HOH HOH C . D 4 HOH 20 220 23 HOH HOH C . D 4 HOH 21 221 2 HOH HOH C . D 4 HOH 22 222 45 HOH HOH C . D 4 HOH 23 223 59 HOH HOH C . D 4 HOH 24 224 26 HOH HOH C . D 4 HOH 25 225 61 HOH HOH C . D 4 HOH 26 226 19 HOH HOH C . D 4 HOH 27 227 58 HOH HOH C . D 4 HOH 28 228 57 HOH HOH C . D 4 HOH 29 229 53 HOH HOH C . D 4 HOH 30 230 24 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5IWJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 46.783 _cell.length_a_esd ? _cell.length_b 46.783 _cell.length_b_esd ? _cell.length_c 34.948 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IWJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1uL 2mM ss oligonucleotide, 1uL 3mM rac-RuTAP2dppz, 6uL of a solution containing 20mM BaCl2, 80mM KCl, 10% (V/V) hexylene glycol, 12mM spermine, 40mM Na-cacodylate pH 7 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-12-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5IWJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 28 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3455 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.93 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.939 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.82 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.63 _refine.B_iso_max ? _refine.B_iso_mean 50.684 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5IWJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.88 _refine.ls_d_res_low 28.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3207 _refine.ls_number_reflns_R_free 193 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.07 _refine.ls_percent_reflns_R_free 5.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21403 _refine.ls_R_factor_R_free 0.27716 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.21048 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.150 _refine.pdbx_overall_ESU_R_Free 0.159 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 4.736 _refine.overall_SU_ML 0.133 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 284 _refine_hist.d_res_high 1.88 _refine_hist.d_res_low 28.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.013 290 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 133 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.323 1.592 456 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.463 3.000 305 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.066 0.200 30 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.016 0.020 176 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 80 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.253 5.120 290 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.249 5.120 289 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.192 7.640 457 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.171 53.440 1215 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.112 53.433 1201 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.880 _refine_ls_shell.d_res_low 1.929 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.number_reflns_R_work 217 _refine_ls_shell.percent_reflns_obs 96.20 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.446 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.333 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5IWJ _struct.title 'LAmbda-[Ru(TAP)2(dppz)]2+ bound to d(CCGGGCCCGG' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IWJ _struct_keywords.text 'Ruthenium, photooxidising, DNA, intercalation' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5IWJ _struct_ref.pdbx_db_accession 5IWJ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5IWJ _struct_ref_seq.pdbx_strand_id C _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5IWJ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2050 ? 1 MORE -25 ? 1 'SSA (A^2)' 4380 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_774 -y+2,-x+2,-z-1/2 0.0000000000 -1.0000000000 0.0000000000 93.5660000000 -1.0000000000 0.0000000000 0.0000000000 93.5660000000 0.0000000000 0.0000000000 -1.0000000000 -17.4740000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 4 O6 ? ? ? 1_555 B BA . BA ? ? C DG 4 C BA 101 1_555 ? ? ? ? ? ? ? 2.903 ? ? metalc2 metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O ? ? C BA 101 C HOH 206 1_555 ? ? ? ? ? ? ? 2.746 ? ? metalc3 metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O ? ? C BA 101 C HOH 208 1_555 ? ? ? ? ? ? ? 3.101 ? ? metalc4 metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O ? ? C BA 101 C HOH 209 1_555 ? ? ? ? ? ? ? 2.698 ? ? metalc5 metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O ? ? C BA 101 C HOH 213 8_774 ? ? ? ? ? ? ? 2.836 ? ? metalc6 metalc ? ? B BA . BA ? ? ? 1_555 D HOH . O ? ? C BA 101 C HOH 215 1_555 ? ? ? ? ? ? ? 2.676 ? ? hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? C DC 1 C DG 10 8_774 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? C DC 2 C DG 9 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? C DC 2 C DG 9 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? C DC 2 C DG 9 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 8 N3 ? ? C DG 3 C DC 8 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 8 O2 ? ? C DG 3 C DC 8 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 8 N4 ? ? C DG 3 C DC 8 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? C DG 4 C DC 7 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? C DG 4 C DC 7 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? C DG 4 C DC 7 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? C DG 5 C DC 6 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? C DG 5 C DC 6 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? C DG 5 C DC 6 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? C DC 6 C DG 5 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? C DC 6 C DG 5 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? C DC 6 C DG 5 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? C DC 7 C DG 4 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? C DC 7 C DG 4 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? C DC 7 C DG 4 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 3 N1 ? ? C DC 8 C DG 3 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 3 O6 ? ? C DC 8 C DG 3 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 3 N2 ? ? C DC 8 C DG 3 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? C DG 9 C DC 2 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? C DG 9 C DC 2 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? C DG 9 C DC 2 8_774 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? C DG 10 C DC 1 8_774 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 4 ? C DG 4 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 206 ? 1_555 70.6 ? 2 O6 ? A DG 4 ? C DG 4 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 208 ? 1_555 77.2 ? 3 O ? D HOH . ? C HOH 206 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 208 ? 1_555 130.7 ? 4 O6 ? A DG 4 ? C DG 4 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 209 ? 1_555 137.8 ? 5 O ? D HOH . ? C HOH 206 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 209 ? 1_555 75.6 ? 6 O ? D HOH . ? C HOH 208 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 209 ? 1_555 145.1 ? 7 O6 ? A DG 4 ? C DG 4 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 213 ? 8_774 73.6 ? 8 O ? D HOH . ? C HOH 206 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 213 ? 8_774 64.8 ? 9 O ? D HOH . ? C HOH 208 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 213 ? 8_774 71.0 ? 10 O ? D HOH . ? C HOH 209 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 213 ? 8_774 113.6 ? 11 O6 ? A DG 4 ? C DG 4 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 215 ? 1_555 129.5 ? 12 O ? D HOH . ? C HOH 206 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 215 ? 1_555 138.9 ? 13 O ? D HOH . ? C HOH 208 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 215 ? 1_555 90.4 ? 14 O ? D HOH . ? C HOH 209 ? 1_555 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 215 ? 1_555 67.2 ? 15 O ? D HOH . ? C HOH 213 ? 8_774 BA ? B BA . ? C BA 101 ? 1_555 O ? D HOH . ? C HOH 215 ? 1_555 147.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C BA 101 ? 7 'binding site for residue BA C 101' AC2 Software C RKL 102 ? 10 'binding site for residue RKL C 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 DG A 3 ? DG C 3 . ? 1_555 ? 2 AC1 7 DG A 4 ? DG C 4 . ? 1_555 ? 3 AC1 7 HOH D . ? HOH C 206 . ? 1_555 ? 4 AC1 7 HOH D . ? HOH C 209 . ? 1_555 ? 5 AC1 7 HOH D . ? HOH C 213 . ? 8_774 ? 6 AC1 7 HOH D . ? HOH C 215 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH C 229 . ? 1_555 ? 8 AC2 10 DC A 1 ? DC C 1 . ? 8_774 ? 9 AC2 10 DC A 2 ? DC C 2 . ? 8_774 ? 10 AC2 10 DG A 3 ? DG C 3 . ? 6_574 ? 11 AC2 10 DG A 3 ? DG C 3 . ? 8_774 ? 12 AC2 10 DG A 4 ? DG C 4 . ? 6_574 ? 13 AC2 10 DC A 7 ? DC C 7 . ? 3_754 ? 14 AC2 10 DC A 8 ? DC C 8 . ? 3_754 ? 15 AC2 10 DG A 9 ? DG C 9 . ? 1_555 ? 16 AC2 10 DG A 10 ? DG C 10 . ? 1_555 ? 17 AC2 10 HOH D . ? HOH C 205 . ? 3_754 ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BA BA BA N N 1 DC OP3 O N N 2 DC P P N N 3 DC OP1 O N N 4 DC OP2 O N N 5 DC "O5'" O N N 6 DC "C5'" C N N 7 DC "C4'" C N R 8 DC "O4'" O N N 9 DC "C3'" C N S 10 DC "O3'" O N N 11 DC "C2'" C N N 12 DC "C1'" C N R 13 DC N1 N N N 14 DC C2 C N N 15 DC O2 O N N 16 DC N3 N N N 17 DC C4 C N N 18 DC N4 N N N 19 DC C5 C N N 20 DC C6 C N N 21 DC HOP3 H N N 22 DC HOP2 H N N 23 DC "H5'" H N N 24 DC "H5''" H N N 25 DC "H4'" H N N 26 DC "H3'" H N N 27 DC "HO3'" H N N 28 DC "H2'" H N N 29 DC "H2''" H N N 30 DC "H1'" H N N 31 DC H41 H N N 32 DC H42 H N N 33 DC H5 H N N 34 DC H6 H N N 35 DG OP3 O N N 36 DG P P N N 37 DG OP1 O N N 38 DG OP2 O N N 39 DG "O5'" O N N 40 DG "C5'" C N N 41 DG "C4'" C N R 42 DG "O4'" O N N 43 DG "C3'" C N S 44 DG "O3'" O N N 45 DG "C2'" C N N 46 DG "C1'" C N R 47 DG N9 N Y N 48 DG C8 C Y N 49 DG N7 N Y N 50 DG C5 C Y N 51 DG C6 C N N 52 DG O6 O N N 53 DG N1 N N N 54 DG C2 C N N 55 DG N2 N N N 56 DG N3 N N N 57 DG C4 C Y N 58 DG HOP3 H N N 59 DG HOP2 H N N 60 DG "H5'" H N N 61 DG "H5''" H N N 62 DG "H4'" H N N 63 DG "H3'" H N N 64 DG "HO3'" H N N 65 DG "H2'" H N N 66 DG "H2''" H N N 67 DG "H1'" H N N 68 DG H8 H N N 69 DG H1 H N N 70 DG H21 H N N 71 DG H22 H N N 72 HOH O O N N 73 HOH H1 H N N 74 HOH H2 H N N 75 RKL RU RU N N 76 RKL C1 C Y N 77 RKL N1 N Y N 78 RKL C2 C Y N 79 RKL N2 N Y N 80 RKL C3 C Y N 81 RKL N3 N Y N 82 RKL C4 C Y N 83 RKL N4 N Y N 84 RKL C5 C Y N 85 RKL N5 N Y N 86 RKL C6 C Y N 87 RKL N6 N Y N 88 RKL C7 C Y N 89 RKL N7 N Y N 90 RKL C8 C Y N 91 RKL N8 N Y N 92 RKL C9 C Y N 93 RKL N9 N Y N 94 RKL C10 C Y N 95 RKL N10 N Y N 96 RKL C11 C Y N 97 RKL N11 N Y N 98 RKL C12 C Y N 99 RKL N12 N Y N 100 RKL C13 C Y N 101 RKL C14 C Y N 102 RKL C15 C Y N 103 RKL C16 C Y N 104 RKL C17 C Y N 105 RKL C18 C Y N 106 RKL C19 C Y N 107 RKL C20 C Y N 108 RKL C21 C Y N 109 RKL C22 C Y N 110 RKL C23 C Y N 111 RKL C24 C Y N 112 RKL C25 C Y N 113 RKL C26 C Y N 114 RKL C27 C Y N 115 RKL C28 C Y N 116 RKL C29 C Y N 117 RKL C30 C Y N 118 RKL C31 C Y N 119 RKL C32 C Y N 120 RKL C33 C Y N 121 RKL C34 C Y N 122 RKL C35 C Y N 123 RKL C36 C Y N 124 RKL C37 C Y N 125 RKL C38 C Y N 126 RKL H2 H N N 127 RKL H3 H N N 128 RKL H4 H N N 129 RKL H9 H N N 130 RKL H11 H N N 131 RKL H12 H N N 132 RKL H14 H N N 133 RKL H16 H N N 134 RKL H17 H N N 135 RKL H18 H N N 136 RKL H20 H N N 137 RKL H21 H N N 138 RKL H23 H N N 139 RKL H24 H N N 140 RKL H27 H N N 141 RKL H28 H N N 142 RKL H30 H N N 143 RKL H31 H N N 144 RKL H33 H N N 145 RKL H34 H N N 146 RKL H37 H N N 147 RKL H38 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 RKL RU N1 sing N N 77 RKL RU N2 sing N N 78 RKL RU N5 sing N N 79 RKL RU N8 sing N N 80 RKL RU N9 sing N N 81 RKL RU N12 sing N N 82 RKL C1 N2 doub Y N 83 RKL C1 C5 sing Y N 84 RKL C1 C10 sing Y N 85 RKL N1 C10 doub Y N 86 RKL N1 C12 sing Y N 87 RKL C2 N2 sing Y N 88 RKL C2 C3 doub Y N 89 RKL C2 H2 sing N N 90 RKL C3 C4 sing Y N 91 RKL C3 H3 sing N N 92 RKL N3 C6 doub Y N 93 RKL N3 C15 sing Y N 94 RKL C4 C5 doub Y N 95 RKL C4 H4 sing N N 96 RKL N4 C7 doub Y N 97 RKL N4 C13 sing Y N 98 RKL C5 C6 sing Y N 99 RKL N5 C19 doub Y N 100 RKL N5 C20 sing Y N 101 RKL C6 C7 sing Y N 102 RKL N6 C21 sing Y N 103 RKL N6 C22 doub Y N 104 RKL C7 C8 sing Y N 105 RKL N7 C25 doub Y N 106 RKL N7 C27 sing Y N 107 RKL C8 C9 doub Y N 108 RKL C8 C10 sing Y N 109 RKL N8 C26 doub Y N 110 RKL N8 C28 sing Y N 111 RKL C9 C11 sing Y N 112 RKL C9 H9 sing N N 113 RKL N9 C29 doub Y N 114 RKL N9 C30 sing Y N 115 RKL N10 C31 sing Y N 116 RKL N10 C32 doub Y N 117 RKL C11 C12 doub Y N 118 RKL C11 H11 sing N N 119 RKL N11 C35 doub Y N 120 RKL N11 C37 sing Y N 121 RKL C12 H12 sing N N 122 RKL N12 C36 doub Y N 123 RKL N12 C38 sing Y N 124 RKL C13 C14 sing Y N 125 RKL C13 C15 doub Y N 126 RKL C14 C18 doub Y N 127 RKL C14 H14 sing N N 128 RKL C15 C16 sing Y N 129 RKL C16 C17 doub Y N 130 RKL C16 H16 sing N N 131 RKL C17 C18 sing Y N 132 RKL C17 H17 sing N N 133 RKL C18 H18 sing N N 134 RKL C19 C22 sing Y N 135 RKL C19 C26 sing Y N 136 RKL C20 C21 doub Y N 137 RKL C20 H20 sing N N 138 RKL C21 H21 sing N N 139 RKL C22 C23 sing Y N 140 RKL C23 C24 doub Y N 141 RKL C23 H23 sing N N 142 RKL C24 C25 sing Y N 143 RKL C24 H24 sing N N 144 RKL C25 C26 sing Y N 145 RKL C27 C28 doub Y N 146 RKL C27 H27 sing N N 147 RKL C28 H28 sing N N 148 RKL C29 C32 sing Y N 149 RKL C29 C36 sing Y N 150 RKL C30 C31 doub Y N 151 RKL C30 H30 sing N N 152 RKL C31 H31 sing N N 153 RKL C32 C33 sing Y N 154 RKL C33 C34 doub Y N 155 RKL C33 H33 sing N N 156 RKL C34 C35 sing Y N 157 RKL C34 H34 sing N N 158 RKL C35 C36 sing Y N 159 RKL C37 C38 doub Y N 160 RKL C37 H37 sing N N 161 RKL C38 H38 sing N N 162 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5IWJ 'double helix' 5IWJ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 10 8_774 -2.491 4.830 0.827 -5.755 18.902 -107.766 1 C_DC1:DG10_C C 1 ? C 10 ? ? 3 1 A DC 2 1_555 A DG 9 8_774 0.224 -0.113 0.131 -7.806 1.305 0.507 2 C_DC2:DG9_C C 2 ? C 9 ? 19 1 1 A DG 3 1_555 A DC 8 8_774 -0.310 -0.073 0.104 24.037 -8.188 2.551 3 C_DG3:DC8_C C 3 ? C 8 ? 19 1 1 A DG 4 1_555 A DC 7 8_774 -0.281 -0.200 -0.320 -12.243 3.827 -1.956 4 C_DG4:DC7_C C 4 ? C 7 ? 19 1 1 A DG 5 1_555 A DC 6 8_774 -0.238 -0.190 0.285 0.690 -4.697 -1.575 5 C_DG5:DC6_C C 5 ? C 6 ? 19 1 1 A DC 6 1_555 A DG 5 8_774 0.238 -0.190 0.285 -0.690 -4.697 -1.575 6 C_DC6:DG5_C C 6 ? C 5 ? 19 1 1 A DC 7 1_555 A DG 4 8_774 0.281 -0.200 -0.320 12.243 3.827 -1.956 7 C_DC7:DG4_C C 7 ? C 4 ? 19 1 1 A DC 8 1_555 A DG 3 8_774 0.310 -0.073 0.104 -24.037 -8.188 2.551 8 C_DC8:DG3_C C 8 ? C 3 ? 19 1 1 A DG 9 1_555 A DC 2 8_774 -0.224 -0.113 0.131 7.806 1.305 0.507 9 C_DG9:DC2_C C 9 ? C 2 ? 19 1 1 A DG 10 1_555 A DC 1 8_774 2.491 -4.830 -0.827 5.755 -18.902 107.766 10 C_DG10:DC1_C C 10 ? C 1 ? ? 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 10 8_774 A DC 2 1_555 A DG 9 8_774 -0.757 1.415 6.446 3.112 -12.073 -16.798 7.106 0.750 6.116 35.625 9.184 -20.892 1 CC_DC1DC2:DG9DG10_CC C 1 ? C 10 ? C 2 ? C 9 ? 1 A DC 2 1_555 A DG 9 8_774 A DG 3 1_555 A DC 8 8_774 -0.085 1.568 2.699 1.335 5.326 20.295 2.308 0.732 2.995 14.770 -3.703 21.017 2 CC_DC2DG3:DC8DG9_CC C 2 ? C 9 ? C 3 ? C 8 ? 1 A DG 3 1_555 A DC 8 8_774 A DG 4 1_555 A DC 7 8_774 -0.217 1.099 5.259 -0.522 52.433 12.536 -5.348 0.174 2.337 77.495 0.772 53.810 3 CC_DG3DG4:DC7DC8_CC C 3 ? C 8 ? C 4 ? C 7 ? 1 A DG 4 1_555 A DC 7 8_774 A DG 5 1_555 A DC 6 8_774 -1.122 0.606 3.106 -10.141 8.958 32.566 -0.368 0.304 3.345 15.182 17.188 35.194 4 CC_DG4DG5:DC6DC7_CC C 4 ? C 7 ? C 5 ? C 6 ? 1 A DG 5 1_555 A DC 6 8_774 A DC 6 1_555 A DG 5 8_774 0.000 -0.543 3.340 0.000 8.734 30.864 -2.556 0.000 3.075 16.013 0.000 32.047 5 CC_DG5DC6:DG5DC6_CC C 5 ? C 6 ? C 6 ? C 5 ? 1 A DC 6 1_555 A DG 5 8_774 A DC 7 1_555 A DG 4 8_774 1.122 0.606 3.106 10.141 8.958 32.566 -0.368 -0.304 3.345 15.182 -17.188 35.194 6 CC_DC6DC7:DG4DG5_CC C 6 ? C 5 ? C 7 ? C 4 ? 1 A DC 7 1_555 A DG 4 8_774 A DC 8 1_555 A DG 3 8_774 0.217 1.099 5.259 0.522 52.433 12.536 -5.348 -0.174 2.337 77.495 -0.772 53.810 7 CC_DC7DC8:DG3DG4_CC C 7 ? C 4 ? C 8 ? C 3 ? 1 A DC 8 1_555 A DG 3 8_774 A DG 9 1_555 A DC 2 8_774 0.085 1.568 2.699 -1.335 5.326 20.295 2.308 -0.732 2.995 14.770 3.703 21.017 8 CC_DC8DG9:DC2DG3_CC C 8 ? C 3 ? C 9 ? C 2 ? 1 A DG 9 1_555 A DC 2 8_774 A DG 10 1_555 A DC 1 8_774 2.484 6.149 0.380 165.736 -24.471 151.088 3.086 -1.171 0.755 -12.264 -83.062 176.893 9 CC_DG9DG10:DC1DC2_CC C 9 ? C 2 ? C 10 ? C 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' BB/K019279/1 1 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' BB/M004635/1 2 # _atom_sites.entry_id 5IWJ _atom_sites.fract_transf_matrix[1][1] 0.021375 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021375 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.028614 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C N O P RU # loop_