HEADER TRANSFERASE 28-MAR-16 5J0A TITLE CRYSTAL STRUCTURE OF PDZ-BINDING KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYMPHOKINE-ACTIVATED KILLER T-CELL-ORIGINATED PROTEIN COMPND 3 KINASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 23-320; COMPND 6 SYNONYM: CANCER/TESTIS ANTIGEN 84,CT84,MAPKK-LIKE PROTEIN KINASE, COMPND 7 NORI-3,PDZ-BINDING KINASE,SPERMATOGENESIS-RELATED PROTEIN KINASE,SPK, COMPND 8 T-LAK CELL-ORIGINATED PROTEIN KINASE; COMPND 9 EC: 2.7.12.2; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: LYMPHOKINE-ACTIVATED KILLER T-CELL-ORIGINATED PROTEIN COMPND 14 KINASE; COMPND 15 CHAIN: B; COMPND 16 FRAGMENT: UNP RESIDUES 19-319; COMPND 17 SYNONYM: CANCER/TESTIS ANTIGEN 84,CT84,MAPKK-LIKE PROTEIN KINASE, COMPND 18 NORI-3,PDZ-BINDING KINASE,SPERMATOGENESIS-RELATED PROTEIN KINASE,SPK, COMPND 19 T-LAK CELL-ORIGINATED PROTEIN KINASE; COMPND 20 EC: 2.7.12.2; COMPND 21 ENGINEERED: YES; COMPND 22 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PBK, TOPK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: PBK, TOPK; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PROTEIN KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.W.ZOU,H.ZHOU,X.YANG REVDAT 2 20-MAR-24 5J0A 1 JRNL REMARK REVDAT 1 07-SEP-16 5J0A 0 JRNL AUTH C.DONG,X.TANG,Y.XIE,Q.ZOU,X.YANG,H.ZHOU JRNL TITL THE CRYSTAL STRUCTURE OF AN INACTIVE DIMER OF PDZ-BINDING JRNL TITL 2 KINASE JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 476 586 2016 JRNL REFN ESSN 1090-2104 JRNL PMID 27262437 JRNL DOI 10.1016/J.BBRC.2016.05.166 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1070756.550 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 31109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1580 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 53.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2769 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE : 0.4240 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 172 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.032 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4735 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.61000 REMARK 3 B22 (A**2) : 20.98000 REMARK 3 B33 (A**2) : -15.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM SIGMAA (A) : 0.54 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.48 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.68 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.420 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.730 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.900 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.090 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 54.44 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR/PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR/WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ./SO4.PAR REMARK 3 PARAMETER FILE 4 : ./COMA.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR/PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR/WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ./SO4.TOP REMARK 3 TOPOLOGY FILE 4 : ./COMA.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 5J0A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219757. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32541 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 32.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 2.0 M AMMONIUM REMARK 280 SULFATE, 0.1 M CAPS, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.77900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.41750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.95250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.41750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.77900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.95250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -188.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 22 REMARK 465 GLY B 18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 31 92.48 -58.88 REMARK 500 THR A 42 155.78 177.95 REMARK 500 LYS A 50 -72.90 -73.16 REMARK 500 PRO A 53 49.40 -68.30 REMARK 500 PRO A 95 -19.57 -48.97 REMARK 500 ALA A 106 106.18 -35.77 REMARK 500 ASP A 108 104.93 -58.32 REMARK 500 ALA A 133 -99.86 -134.42 REMARK 500 ASP A 167 44.55 -155.28 REMARK 500 LYS A 169 170.39 173.34 REMARK 500 VAL A 199 77.35 -66.32 REMARK 500 ILE A 207 -53.99 -135.70 REMARK 500 GLU A 210 -67.97 -17.72 REMARK 500 GLU A 219 -16.64 -47.50 REMARK 500 GLU A 220 -8.63 68.04 REMARK 500 ASN A 221 -9.15 -149.39 REMARK 500 ASP A 253 -75.44 -48.11 REMARK 500 GLU A 257 -84.00 -77.69 REMARK 500 GLU A 263 -6.35 -56.64 REMARK 500 GLU A 269 -82.93 -53.13 REMARK 500 TYR A 271 -75.99 -51.73 REMARK 500 LEU A 275 94.84 -48.27 REMARK 500 ASN A 282 51.36 -92.31 REMARK 500 LEU A 286 -152.76 -83.27 REMARK 500 ASP A 287 -143.87 -163.64 REMARK 500 TYR A 290 20.75 -75.31 REMARK 500 GLU A 319 -88.36 -42.35 REMARK 500 LEU B 21 -147.83 48.25 REMARK 500 THR B 24 147.57 -177.48 REMARK 500 PRO B 25 136.03 -39.21 REMARK 500 THR B 42 -158.36 -150.95 REMARK 500 PRO B 53 41.76 -67.06 REMARK 500 ASN B 107 -37.24 168.56 REMARK 500 ASP B 108 -177.83 -55.67 REMARK 500 SER B 110 134.49 -178.15 REMARK 500 ILE B 127 -8.03 -58.88 REMARK 500 LYS B 132 4.33 -65.37 REMARK 500 ALA B 133 -103.84 -146.24 REMARK 500 PHE B 138 137.33 -31.55 REMARK 500 ASP B 167 83.76 -159.67 REMARK 500 ASP B 186 37.25 70.09 REMARK 500 ASP B 194 177.93 -55.41 REMARK 500 ALA B 204 145.33 -39.40 REMARK 500 GLU B 210 -64.16 -28.76 REMARK 500 ASN B 221 56.16 -159.47 REMARK 500 GLU B 257 2.18 92.23 REMARK 500 LYS B 259 -74.95 -14.73 REMARK 500 ASP B 267 84.91 -69.25 REMARK 500 TYR B 271 -73.85 -60.49 REMARK 500 ASP B 287 -151.44 -137.97 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 560 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A 561 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH B 580 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 581 DISTANCE = 7.07 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HC4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HC4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HC4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HC4 B 406 DBREF 5J0A A 23 320 UNP Q96KB5 TOPK_HUMAN 23 320 DBREF 5J0A B 19 319 UNP Q96KB5 TOPK_HUMAN 19 319 SEQADV 5J0A GLY A 22 UNP Q96KB5 EXPRESSION TAG SEQADV 5J0A GLU A 198 UNP Q96KB5 THR 198 ENGINEERED MUTATION SEQADV 5J0A ALA A 321 UNP Q96KB5 EXPRESSION TAG SEQADV 5J0A GLY B 18 UNP Q96KB5 EXPRESSION TAG SEQADV 5J0A GLU B 198 UNP Q96KB5 THR 198 ENGINEERED MUTATION SEQADV 5J0A ALA B 320 UNP Q96KB5 EXPRESSION TAG SEQADV 5J0A ALA B 321 UNP Q96KB5 EXPRESSION TAG SEQRES 1 A 300 GLY SER THR PRO THR ILE ASN ILE PRO ALA SER PRO PHE SEQRES 2 A 300 MET GLN LYS LEU GLY PHE GLY THR GLY VAL ASN VAL TYR SEQRES 3 A 300 LEU MET LYS ARG SER PRO ARG GLY LEU SER HIS SER PRO SEQRES 4 A 300 TRP ALA VAL LYS LYS ILE ASN PRO ILE CYS ASN ASP HIS SEQRES 5 A 300 TYR ARG SER VAL TYR GLN LYS ARG LEU MET ASP GLU ALA SEQRES 6 A 300 LYS ILE LEU LYS SER LEU HIS HIS PRO ASN ILE VAL GLY SEQRES 7 A 300 TYR ARG ALA PHE THR GLU ALA ASN ASP GLY SER LEU CYS SEQRES 8 A 300 LEU ALA MET GLU TYR GLY GLY GLU LYS SER LEU ASN ASP SEQRES 9 A 300 LEU ILE GLU GLU ARG TYR LYS ALA SER GLN ASP PRO PHE SEQRES 10 A 300 PRO ALA ALA ILE ILE LEU LYS VAL ALA LEU ASN MET ALA SEQRES 11 A 300 ARG GLY LEU LYS TYR LEU HIS GLN GLU LYS LYS LEU LEU SEQRES 12 A 300 HIS GLY ASP ILE LYS SER SER ASN VAL VAL ILE LYS GLY SEQRES 13 A 300 ASP PHE GLU THR ILE LYS ILE CYS ASP VAL GLY VAL SER SEQRES 14 A 300 LEU PRO LEU ASP GLU ASN MET GLU VAL THR ASP PRO GLU SEQRES 15 A 300 ALA CYS TYR ILE GLY THR GLU PRO TRP LYS PRO LYS GLU SEQRES 16 A 300 ALA VAL GLU GLU ASN GLY VAL ILE THR ASP LYS ALA ASP SEQRES 17 A 300 ILE PHE ALA PHE GLY LEU THR LEU TRP GLU MET MET THR SEQRES 18 A 300 LEU SER ILE PRO HIS ILE ASN LEU SER ASN ASP ASP ASP SEQRES 19 A 300 ASP GLU ASP LYS THR PHE ASP GLU SER ASP PHE ASP ASP SEQRES 20 A 300 GLU ALA TYR TYR ALA ALA LEU GLY THR ARG PRO PRO ILE SEQRES 21 A 300 ASN MET GLU GLU LEU ASP GLU SER TYR GLN LYS VAL ILE SEQRES 22 A 300 GLU LEU PHE SER VAL CYS THR ASN GLU ASP PRO LYS ASP SEQRES 23 A 300 ARG PRO SER ALA ALA HIS ILE VAL GLU ALA LEU GLU THR SEQRES 24 A 300 ALA SEQRES 1 B 304 GLY SER VAL LEU CYS SER THR PRO THR ILE ASN ILE PRO SEQRES 2 B 304 ALA SER PRO PHE MET GLN LYS LEU GLY PHE GLY THR GLY SEQRES 3 B 304 VAL ASN VAL TYR LEU MET LYS ARG SER PRO ARG GLY LEU SEQRES 4 B 304 SER HIS SER PRO TRP ALA VAL LYS LYS ILE ASN PRO ILE SEQRES 5 B 304 CYS ASN ASP HIS TYR ARG SER VAL TYR GLN LYS ARG LEU SEQRES 6 B 304 MET ASP GLU ALA LYS ILE LEU LYS SER LEU HIS HIS PRO SEQRES 7 B 304 ASN ILE VAL GLY TYR ARG ALA PHE THR GLU ALA ASN ASP SEQRES 8 B 304 GLY SER LEU CYS LEU ALA MET GLU TYR GLY GLY GLU LYS SEQRES 9 B 304 SER LEU ASN ASP LEU ILE GLU GLU ARG TYR LYS ALA SER SEQRES 10 B 304 GLN ASP PRO PHE PRO ALA ALA ILE ILE LEU LYS VAL ALA SEQRES 11 B 304 LEU ASN MET ALA ARG GLY LEU LYS TYR LEU HIS GLN GLU SEQRES 12 B 304 LYS LYS LEU LEU HIS GLY ASP ILE LYS SER SER ASN VAL SEQRES 13 B 304 VAL ILE LYS GLY ASP PHE GLU THR ILE LYS ILE CYS ASP SEQRES 14 B 304 VAL GLY VAL SER LEU PRO LEU ASP GLU ASN MET GLU VAL SEQRES 15 B 304 THR ASP PRO GLU ALA CYS TYR ILE GLY THR GLU PRO TRP SEQRES 16 B 304 LYS PRO LYS GLU ALA VAL GLU GLU ASN GLY VAL ILE THR SEQRES 17 B 304 ASP LYS ALA ASP ILE PHE ALA PHE GLY LEU THR LEU TRP SEQRES 18 B 304 GLU MET MET THR LEU SER ILE PRO HIS ILE ASN LEU SER SEQRES 19 B 304 ASN ASP ASP ASP ASP GLU ASP LYS THR PHE ASP GLU SER SEQRES 20 B 304 ASP PHE ASP ASP GLU ALA TYR TYR ALA ALA LEU GLY THR SEQRES 21 B 304 ARG PRO PRO ILE ASN MET GLU GLU LEU ASP GLU SER TYR SEQRES 22 B 304 GLN LYS VAL ILE GLU LEU PHE SER VAL CYS THR ASN GLU SEQRES 23 B 304 ASP PRO LYS ASP ARG PRO SER ALA ALA HIS ILE VAL GLU SEQRES 24 B 304 ALA LEU GLU ALA ALA HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET HC4 A 406 12 HET HC4 A 407 12 HET HC4 A 408 12 HET SO4 B 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HET HC4 B 406 12 HETNAM SO4 SULFATE ION HETNAM HC4 4'-HYDROXYCINNAMIC ACID HETSYN HC4 PARA-COUMARIC ACID FORMUL 3 SO4 10(O4 S 2-) FORMUL 8 HC4 4(C9 H8 O3) FORMUL 17 HOH *142(H2 O) HELIX 1 AA1 PRO A 33 LEU A 38 1 6 HELIX 2 AA2 PRO A 53 HIS A 58 1 6 HELIX 3 AA3 SER A 59 ILE A 66 1 8 HELIX 4 AA4 PRO A 68 ASN A 71 5 4 HELIX 5 AA5 ASP A 72 TYR A 78 1 7 HELIX 6 AA6 MET A 83 LEU A 92 1 10 HELIX 7 AA7 LEU A 123 LYS A 132 1 10 HELIX 8 AA8 PRO A 139 GLU A 160 1 22 HELIX 9 AA9 LYS A 169 SER A 171 5 3 HELIX 10 AB1 THR A 209 LYS A 213 5 5 HELIX 11 AB2 PRO A 214 VAL A 218 5 5 HELIX 12 AB3 ASP A 226 LEU A 243 1 18 HELIX 13 AB4 ASP A 267 LEU A 275 1 9 HELIX 14 AB5 TYR A 290 THR A 301 1 12 HELIX 15 AB6 ASP A 304 ARG A 308 5 5 HELIX 16 AB7 SER A 310 THR A 320 1 11 HELIX 17 AB8 SER B 32 LEU B 38 1 7 HELIX 18 AB9 PRO B 53 HIS B 58 1 6 HELIX 19 AC1 TRP B 61 ILE B 66 1 6 HELIX 20 AC2 PRO B 68 ASN B 71 5 4 HELIX 21 AC3 ASP B 72 TYR B 78 1 7 HELIX 22 AC4 LEU B 82 LEU B 92 1 11 HELIX 23 AC5 LEU B 123 ARG B 130 1 8 HELIX 24 AC6 PRO B 139 GLN B 159 1 21 HELIX 25 AC7 LYS B 169 SER B 171 5 3 HELIX 26 AC8 THR B 209 LYS B 213 5 5 HELIX 27 AC9 PRO B 214 GLU B 219 1 6 HELIX 28 AD1 ASP B 226 LEU B 243 1 18 HELIX 29 AD2 ASP B 262 PHE B 266 5 5 HELIX 30 AD3 ASP B 267 LEU B 275 1 9 HELIX 31 AD4 ASN B 282 LEU B 286 5 5 HELIX 32 AD5 TYR B 290 THR B 301 1 12 HELIX 33 AD6 ASP B 304 ARG B 308 5 5 HELIX 34 AD7 SER B 310 GLU B 319 1 10 SHEET 1 AA1 2 THR A 26 ILE A 29 0 SHEET 2 AA1 2 VAL A 44 TYR A 47 -1 O VAL A 44 N ILE A 29 SHEET 1 AA2 3 GLN A 79 LEU A 82 0 SHEET 2 AA2 3 SER A 110 MET A 115 -1 O LEU A 111 N ARG A 81 SHEET 3 AA2 3 TYR A 100 ALA A 102 -1 N ARG A 101 O ALA A 114 SHEET 1 AA3 3 LYS A 121 SER A 122 0 SHEET 2 AA3 3 VAL A 173 LYS A 176 -1 O ILE A 175 N LYS A 121 SHEET 3 AA3 3 THR A 181 ILE A 184 -1 O THR A 181 N LYS A 176 SHEET 1 AA4 2 THR B 26 ILE B 29 0 SHEET 2 AA4 2 VAL B 44 TYR B 47 -1 O VAL B 44 N ILE B 29 SHEET 1 AA5 3 GLN B 79 ARG B 81 0 SHEET 2 AA5 3 LEU B 111 MET B 115 -1 O LEU B 111 N ARG B 81 SHEET 3 AA5 3 TYR B 100 ALA B 102 -1 N ARG B 101 O ALA B 114 SHEET 1 AA6 3 LYS B 121 SER B 122 0 SHEET 2 AA6 3 VAL B 173 LYS B 176 -1 O ILE B 175 N LYS B 121 SHEET 3 AA6 3 THR B 181 ILE B 184 -1 O LYS B 183 N VAL B 174 SITE 1 AC1 1 SER A 76 SITE 1 AC2 4 ARG A 81 GLY A 188 VAL A 189 SER A 190 SITE 1 AC3 6 TYR A 117 GLY A 119 GLU A 120 ILE A 175 SITE 2 AC3 6 LYS A 176 GLY A 177 SITE 1 AC4 2 ARG A 130 PRO A 139 SITE 1 AC5 3 HIS A 94 ARG A 152 VAL A 315 SITE 1 AC6 8 LYS A 65 ILE A 66 ASN A 67 PRO A 68 SITE 2 AC6 8 HOH A 521 THR B 209 GLU B 210 TYR B 272 SITE 1 AC7 8 TYR A 78 ARG A 101 GLU A 116 TYR A 117 SITE 2 AC7 8 TYR B 78 ARG B 101 PHE B 103 LYS B 306 SITE 1 AC8 8 THR A 209 GLU A 210 TYR A 272 HOH A 505 SITE 2 AC8 8 LYS B 65 ILE B 66 ASN B 67 PRO B 68 SITE 1 AC9 4 ARG B 81 GLY B 188 VAL B 189 SER B 190 SITE 1 AD1 4 SER A 76 GLN A 79 HIS B 73 SER B 76 SITE 1 AD2 5 ILE B 69 ARG B 75 GLN B 79 LYS B 80 SITE 2 AD2 5 HOH B 530 SITE 1 AD3 3 HIS B 93 HIS B 94 PRO B 95 SITE 1 AD4 3 ARG B 278 ASN B 302 GLU B 303 SITE 1 AD5 7 LYS B 90 ARG B 101 ALA B 102 THR B 104 SITE 2 AD5 7 GLU B 105 GLU B 219 ASP B 304 CRYST1 75.558 97.905 162.835 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013235 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010214 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006141 0.00000