HEADER TRANSFERASE/TRANSFERASE INHIBITOR 31-MAR-16 5J41 TITLE GLUTATHIONE S-TRANSFERASE BOUND WITH HYDROLYZED PIPERLONGUMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE P; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST CLASS-PI,GSTP1-1; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTP1, FAEES3, GST3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GSTP1, PIPERLONGUMINE, GLUTATHIONE, TRANSFERASE, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.HARSHBARGER,S.GONDI,S.FICARRO,J.HUNTER,D.UDAYAKUMAR,D.GURBANI, AUTHOR 2 J.MARTO,K.WESTOVER REVDAT 4 27-SEP-23 5J41 1 REMARK REVDAT 3 18-JAN-17 5J41 1 JRNL REVDAT 2 21-DEC-16 5J41 1 JRNL REVDAT 1 30-NOV-16 5J41 0 JRNL AUTH W.HARSHBARGER,S.GONDI,S.B.FICARRO,J.HUNTER,D.UDAYAKUMAR, JRNL AUTH 2 D.GURBANI,W.D.SINGER,Y.LIU,L.LI,J.A.MARTO,K.D.WESTOVER JRNL TITL STRUCTURAL AND BIOCHEMICAL ANALYSES REVEAL THE MECHANISM OF JRNL TITL 2 GLUTATHIONE S-TRANSFERASE PI 1 INHIBITION BY THE ANTI-CANCER JRNL TITL 3 COMPOUND PIPERLONGUMINE. JRNL REF J. BIOL. CHEM. V. 292 112 2017 JRNL REFN ESSN 1083-351X JRNL PMID 27872191 JRNL DOI 10.1074/JBC.M116.750299 REMARK 2 REMARK 2 RESOLUTION. 1.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 149156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.340 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.4057 - 2.8671 1.00 10720 145 0.1538 0.1983 REMARK 3 2 2.8671 - 2.2764 1.00 10654 144 0.1705 0.2026 REMARK 3 3 2.2764 - 1.9888 1.00 10578 144 0.1615 0.1661 REMARK 3 4 1.9888 - 1.8071 1.00 10605 144 0.1623 0.1689 REMARK 3 5 1.8071 - 1.6776 1.00 10647 145 0.1554 0.1729 REMARK 3 6 1.6776 - 1.5787 1.00 10558 142 0.1519 0.1617 REMARK 3 7 1.5787 - 1.4997 1.00 10586 144 0.1513 0.1551 REMARK 3 8 1.4997 - 1.4344 1.00 10563 144 0.1566 0.1638 REMARK 3 9 1.4344 - 1.3792 1.00 10501 142 0.1675 0.1836 REMARK 3 10 1.3792 - 1.3316 1.00 10622 145 0.1696 0.1944 REMARK 3 11 1.3316 - 1.2900 1.00 10565 144 0.1747 0.2016 REMARK 3 12 1.2900 - 1.2531 1.00 10558 143 0.1846 0.1891 REMARK 3 13 1.2531 - 1.2201 0.99 10464 142 0.2017 0.2402 REMARK 3 14 1.2201 - 1.1904 0.91 9537 130 0.2233 0.2101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.102 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.803 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3463 REMARK 3 ANGLE : 1.085 4699 REMARK 3 CHIRALITY : 0.080 518 REMARK 3 PLANARITY : 0.006 606 REMARK 3 DIHEDRAL : 18.957 1309 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000219370. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 152714 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.180 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3GUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 100MM MES PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.24750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.72900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.24750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.72900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 36 CG CD OE1 OE2 REMARK 480 LYS A 120 CD CE NZ REMARK 480 LYS A 127 CD CE NZ REMARK 480 LYS A 140 CD CE NZ REMARK 480 GLU B 31 OE1 OE2 REMARK 480 ASP B 59 OD1 REMARK 480 LYS B 120 CE NZ REMARK 480 GLN B 137 OE1 NE2 REMARK 480 LYS B 140 CE NZ REMARK 480 GLN B 147 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 428 O HOH B 463 2.06 REMARK 500 OE2 GLU A 163 O HOH A 401 2.08 REMARK 500 O HOH A 710 O HOH A 745 2.09 REMARK 500 NZ LYS A 127 O HOH A 402 2.09 REMARK 500 O HOH A 589 O HOH B 635 2.10 REMARK 500 O HOH B 572 O HOH B 635 2.10 REMARK 500 O HOH B 692 O HOH B 704 2.11 REMARK 500 O HOH B 576 O HOH B 669 2.12 REMARK 500 OE1 GLU B 163 O HOH B 401 2.12 REMARK 500 O HOH B 409 O HOH B 439 2.15 REMARK 500 O HOH B 417 O HOH B 556 2.15 REMARK 500 O HOH B 617 O HOH B 623 2.17 REMARK 500 O HOH A 627 O HOH B 623 2.17 REMARK 500 O HOH B 435 O HOH B 629 2.18 REMARK 500 O HOH A 401 O HOH A 656 2.19 REMARK 500 O HOH B 678 O HOH B 698 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 563 O HOH B 667 4548 1.85 REMARK 500 O HOH A 434 O HOH A 434 2658 2.07 REMARK 500 O HOH A 651 O HOH B 690 4548 2.14 REMARK 500 O HOH A 407 O HOH B 692 4548 2.18 REMARK 500 O HOH A 764 O HOH B 620 4547 2.19 REMARK 500 O HOH A 424 O HOH A 424 2658 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 74 CZ ARG A 74 NH1 -0.093 REMARK 500 ARG A 74 CZ ARG A 74 NH2 -0.097 REMARK 500 TYR A 103 CG TYR A 103 CD2 -0.094 REMARK 500 TYR A 103 CZ TYR A 103 CE2 -0.112 REMARK 500 ARG B 74 CZ ARG B 74 NH1 -0.093 REMARK 500 ARG B 74 CZ ARG B 74 NH2 -0.093 REMARK 500 TYR B 103 CG TYR B 103 CD2 -0.095 REMARK 500 TYR B 103 CZ TYR B 103 CE2 -0.134 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 74 NH1 - CZ - NH2 ANGL. DEV. = -9.5 DEGREES REMARK 500 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG A 74 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ASP A 152 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 74 NH1 - CZ - NH2 ANGL. DEV. = -8.6 DEGREES REMARK 500 ARG B 74 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 74 NE - CZ - NH2 ANGL. DEV. = 5.2 DEGREES REMARK 500 ASP B 98 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 152 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 113.00 87.81 REMARK 500 TYR A 79 36.70 -141.69 REMARK 500 ASN A 110 37.56 -159.78 REMARK 500 THR A 141 -103.91 -122.32 REMARK 500 GLN B 64 113.21 87.02 REMARK 500 TYR B 79 37.42 -142.40 REMARK 500 ASN B 110 37.34 -160.32 REMARK 500 THR B 141 -103.48 -122.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 763 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 764 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 765 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 766 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 768 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A 769 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A 770 DISTANCE = 6.80 ANGSTROMS REMARK 525 HOH B 754 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 755 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B 756 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B 757 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH B 758 DISTANCE = 6.57 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues 3LF A 301 and GSH A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues 3LF B 301 and GSH B REMARK 800 302 DBREF 5J41 A 1 209 UNP P09211 GSTP1_HUMAN 2 210 DBREF 5J41 B 1 209 UNP P09211 GSTP1_HUMAN 2 210 SEQRES 1 A 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 A 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 A 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 A 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 A 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 A 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 A 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 A 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 A 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 A 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 A 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 A 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 A 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 A 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 A 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 A 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 A 209 GLN SEQRES 1 B 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 B 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 B 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 B 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 B 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 B 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 B 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 B 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 B 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 B 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 B 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 B 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 B 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 B 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 B 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 B 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 B 209 GLN HET 3LF A 301 17 HET GSH A 302 20 HET MES A 303 12 HET 3LF B 301 17 HET GSH B 302 20 HET MES B 303 12 HETNAM 3LF 3-(3,4,5-TRIMETHOXYPHENYL)PROPANOIC ACID HETNAM GSH GLUTATHIONE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 3 3LF 2(C12 H16 O5) FORMUL 4 GSH 2(C10 H17 N3 O6 S) FORMUL 5 MES 2(C6 H13 N O4 S) FORMUL 9 HOH *728(H2 O) HELIX 1 AA1 ARG A 11 ARG A 13 5 3 HELIX 2 AA2 CYS A 14 GLN A 24 1 11 HELIX 3 AA3 THR A 34 GLY A 41 1 8 HELIX 4 AA4 GLY A 41 CYS A 47 1 7 HELIX 5 AA5 GLN A 64 GLY A 77 1 14 HELIX 6 AA6 ASP A 82 ASN A 110 1 29 HELIX 7 AA7 ASN A 110 GLN A 135 1 26 HELIX 8 AA8 ASN A 136 LYS A 140 5 5 HELIX 9 AA9 SER A 149 ALA A 166 1 18 HELIX 10 AB1 GLY A 168 ALA A 172 5 5 HELIX 11 AB2 PHE A 173 ALA A 185 1 13 HELIX 12 AB3 ARG A 186 SER A 195 1 10 HELIX 13 AB4 SER A 195 ASN A 200 1 6 HELIX 14 AB5 ARG B 11 ARG B 13 5 3 HELIX 15 AB6 CYS B 14 GLN B 24 1 11 HELIX 16 AB7 THR B 34 GLY B 41 1 8 HELIX 17 AB8 GLY B 41 CYS B 47 1 7 HELIX 18 AB9 GLN B 64 GLY B 77 1 14 HELIX 19 AC1 ASP B 82 ASN B 110 1 29 HELIX 20 AC2 ASN B 110 GLN B 135 1 26 HELIX 21 AC3 ASN B 136 LYS B 140 5 5 HELIX 22 AC4 SER B 149 ALA B 166 1 18 HELIX 23 AC5 PHE B 173 ALA B 185 1 13 HELIX 24 AC6 ARG B 186 SER B 195 1 10 HELIX 25 AC7 SER B 195 ASN B 200 1 6 SHEET 1 AA1 4 TRP A 28 VAL A 32 0 SHEET 2 AA1 4 TYR A 3 TYR A 7 1 N VAL A 5 O GLU A 31 SHEET 3 AA1 4 LYS A 54 ASP A 57 -1 O LYS A 54 N VAL A 6 SHEET 4 AA1 4 LEU A 60 TYR A 63 -1 O LEU A 62 N PHE A 55 SHEET 1 AA2 4 TRP B 28 VAL B 32 0 SHEET 2 AA2 4 TYR B 3 TYR B 7 1 N VAL B 5 O GLU B 31 SHEET 3 AA2 4 LYS B 54 ASP B 57 -1 O LYS B 54 N VAL B 6 SHEET 4 AA2 4 LEU B 60 TYR B 63 -1 O LEU B 62 N PHE B 55 LINK C2 3LF A 301 SG2 GSH A 302 1555 1555 1.77 LINK C2 3LF B 301 SG2 GSH B 302 1555 1555 1.77 CISPEP 1 LEU A 52 PRO A 53 0 8.69 CISPEP 2 LEU B 52 PRO B 53 0 8.25 SITE 1 AC1 9 ALA A 22 TRP A 28 GLU A 30 GLU A 197 SITE 2 AC1 9 HOH A 405 HOH A 406 HOH A 414 HOH A 438 SITE 3 AC1 9 HOH A 574 SITE 1 AC2 9 HOH A 647 ALA B 22 TRP B 28 GLU B 30 SITE 2 AC2 9 GLU B 197 HOH B 403 HOH B 446 HOH B 455 SITE 3 AC2 9 HOH B 467 SITE 1 AC3 23 TYR A 7 PHE A 8 VAL A 10 GLY A 12 SITE 2 AC3 23 ARG A 13 TRP A 38 LYS A 44 GLN A 51 SITE 3 AC3 23 LEU A 52 PRO A 53 GLN A 64 SER A 65 SITE 4 AC3 23 ILE A 104 TYR A 108 HOH A 418 HOH A 419 SITE 5 AC3 23 HOH A 436 HOH A 447 HOH A 475 HOH A 488 SITE 6 AC3 23 HOH A 507 HOH A 604 ASP B 98 SITE 1 AC4 21 ASP A 98 TYR B 7 PHE B 8 VAL B 10 SITE 2 AC4 21 GLY B 12 ARG B 13 TRP B 38 LYS B 44 SITE 3 AC4 21 GLN B 51 LEU B 52 PRO B 53 GLN B 64 SITE 4 AC4 21 SER B 65 ILE B 104 TYR B 108 HOH B 411 SITE 5 AC4 21 HOH B 413 HOH B 422 HOH B 460 HOH B 492 SITE 6 AC4 21 HOH B 578 CRYST1 78.495 89.458 69.001 90.00 98.24 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012740 0.000000 0.001844 0.00000 SCALE2 0.000000 0.011178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014644 0.00000 MTRIX1 1 0.929929 0.145568 0.337702 -30.09723 1 MTRIX2 1 0.147085 -0.988896 0.021241 22.22864 1 MTRIX3 1 0.337044 0.029918 -0.941013 162.47914 1