HEADER TRANSFERASE 31-MAR-16 5J49 TITLE CRYSTAL STRUCTURE OF UDP-GLUCOSE PYROPHOSPORYLASE / UTP-GLUCOSE-1- TITLE 2 PHOSPHATE URIDYLYLTRANSFERASE FROM BURKHOLDERIA XENOVORANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BUXEA.00118.C.B1; COMPND 5 SYNONYM: UDP-GLUCOSE PYROPHOSPHORYLASE; COMPND 6 EC: 2.7.7.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA XENOVORANS (STRAIN LB400); SOURCE 3 ORGANISM_TAXID: 266265; SOURCE 4 STRAIN: LB400; SOURCE 5 GENE: BXE_A1334; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BUXEA.00118.C.B1 KEYWDS SSGCID, BURKHOLDERIA XENOVORANS, UTP-GLUCOSE-1-PHOSPHATE KEYWDS 2 URIDYLYLTRANSFERASE, UTP-GLUCOSE, URIDYLYLTRANSFERASE, STRUCTURAL KEYWDS 3 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 27-SEP-23 5J49 1 REMARK REVDAT 1 04-MAY-16 5J49 0 JRNL AUTH J.ABENDROTH,P.S.HORANYI,D.D.LORIMER,T.E.EDEWARDS JRNL TITL CRYSTAL STRUCTURE OF UDP-GLUCOSE PYROPHOSPORYLASE / JRNL TITL 2 UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE FROM JRNL TITL 3 BURKHOLDERIA XENOVORANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 62144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0000 - 4.3373 1.00 4582 144 0.1629 0.2027 REMARK 3 2 4.3373 - 3.4429 1.00 4401 139 0.1482 0.1500 REMARK 3 3 3.4429 - 3.0078 1.00 4347 130 0.1683 0.2161 REMARK 3 4 3.0078 - 2.7328 1.00 4325 122 0.1790 0.2199 REMARK 3 5 2.7328 - 2.5370 1.00 4311 133 0.1792 0.2237 REMARK 3 6 2.5370 - 2.3874 1.00 4281 138 0.1759 0.2520 REMARK 3 7 2.3874 - 2.2678 1.00 4246 166 0.1764 0.1986 REMARK 3 8 2.2678 - 2.1691 1.00 4274 138 0.1789 0.2597 REMARK 3 9 2.1691 - 2.0856 1.00 4243 130 0.1828 0.2327 REMARK 3 10 2.0856 - 2.0137 1.00 4236 139 0.1823 0.2188 REMARK 3 11 2.0137 - 1.9507 1.00 4257 145 0.1862 0.2145 REMARK 3 12 1.9507 - 1.8949 1.00 4199 151 0.1830 0.2265 REMARK 3 13 1.8949 - 1.8450 1.00 4252 143 0.1894 0.2124 REMARK 3 14 1.8450 - 1.8000 1.00 4237 135 0.2017 0.2262 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4637 REMARK 3 ANGLE : 0.862 6324 REMARK 3 CHIRALITY : 0.056 719 REMARK 3 PLANARITY : 0.005 822 REMARK 3 DIHEDRAL : 14.302 2820 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.6369 58.4377 -2.5254 REMARK 3 T TENSOR REMARK 3 T11: 0.1901 T22: 0.1252 REMARK 3 T33: 0.1636 T12: -0.0302 REMARK 3 T13: 0.0688 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 3.2948 L22: 2.1450 REMARK 3 L33: 0.9338 L12: -1.6273 REMARK 3 L13: -0.1716 L23: -0.4992 REMARK 3 S TENSOR REMARK 3 S11: 0.0816 S12: 0.0982 S13: 0.1033 REMARK 3 S21: -0.1690 S22: -0.0814 S23: -0.0856 REMARK 3 S31: -0.1310 S32: 0.0177 S33: -0.0083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8025 55.9801 1.8844 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.1533 REMARK 3 T33: 0.1575 T12: 0.0100 REMARK 3 T13: 0.0529 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 3.4690 L22: 2.6125 REMARK 3 L33: 1.4300 L12: 0.7539 REMARK 3 L13: 0.6584 L23: -0.0233 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: -0.2541 S13: -0.1815 REMARK 3 S21: 0.1011 S22: 0.1042 S23: -0.0535 REMARK 3 S31: 0.0209 S32: -0.0542 S33: -0.2156 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8588 72.8348 -15.7996 REMARK 3 T TENSOR REMARK 3 T11: 0.4917 T22: 0.2265 REMARK 3 T33: 0.2621 T12: -0.0600 REMARK 3 T13: 0.0390 T23: 0.0548 REMARK 3 L TENSOR REMARK 3 L11: 3.6688 L22: 2.1429 REMARK 3 L33: 2.9294 L12: 0.7870 REMARK 3 L13: 0.2645 L23: -0.7465 REMARK 3 S TENSOR REMARK 3 S11: -0.2027 S12: 0.5882 S13: 0.2846 REMARK 3 S21: -0.6697 S22: 0.2251 S23: 0.0845 REMARK 3 S31: -0.3752 S32: 0.0237 S33: -0.0745 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.6616 67.7212 -4.1011 REMARK 3 T TENSOR REMARK 3 T11: 0.3046 T22: 0.1995 REMARK 3 T33: 0.3002 T12: -0.0747 REMARK 3 T13: 0.0987 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 2.6138 L22: 2.2402 REMARK 3 L33: 0.8989 L12: -1.3431 REMARK 3 L13: 0.6431 L23: -0.7043 REMARK 3 S TENSOR REMARK 3 S11: -0.1221 S12: -0.0005 S13: 0.5177 REMARK 3 S21: -0.1267 S22: 0.1101 S23: -0.4745 REMARK 3 S31: -0.2782 S32: 0.1051 S33: -0.0135 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3679 42.2429 2.9414 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.1245 REMARK 3 T33: 0.1268 T12: -0.0009 REMARK 3 T13: 0.0159 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 3.6608 L22: 7.9182 REMARK 3 L33: 5.6997 L12: -1.6840 REMARK 3 L13: 0.9256 L23: -3.2208 REMARK 3 S TENSOR REMARK 3 S11: -0.1980 S12: -0.1974 S13: 0.3013 REMARK 3 S21: 0.6038 S22: 0.0084 S23: -0.1237 REMARK 3 S31: -0.2730 S32: 0.1757 S33: 0.1873 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1468 33.6084 -1.2309 REMARK 3 T TENSOR REMARK 3 T11: 0.1129 T22: 0.1349 REMARK 3 T33: 0.1578 T12: -0.0172 REMARK 3 T13: 0.0107 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.0351 L22: 2.1461 REMARK 3 L33: 1.0091 L12: -1.4534 REMARK 3 L13: 0.4842 L23: -0.8827 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.0365 S13: -0.2070 REMARK 3 S21: -0.0429 S22: -0.0017 S23: 0.1484 REMARK 3 S31: -0.0512 S32: 0.0153 S33: 0.0447 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7902 42.8501 -1.7042 REMARK 3 T TENSOR REMARK 3 T11: 0.1270 T22: 0.1259 REMARK 3 T33: 0.1048 T12: -0.0164 REMARK 3 T13: 0.0266 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 6.9057 L22: 3.9153 REMARK 3 L33: 2.2257 L12: -0.4355 REMARK 3 L13: -0.2175 L23: 2.3445 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.1194 S13: 0.0198 REMARK 3 S21: 0.0804 S22: 0.1084 S23: -0.3290 REMARK 3 S31: 0.1714 S32: 0.2707 S33: -0.0786 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4258 42.5990 -6.3742 REMARK 3 T TENSOR REMARK 3 T11: 0.2261 T22: 0.1899 REMARK 3 T33: 0.1691 T12: -0.0092 REMARK 3 T13: 0.0045 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.1832 L22: 5.0468 REMARK 3 L33: 3.6846 L12: -0.0826 REMARK 3 L13: -0.7875 L23: 1.8463 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: 0.2094 S13: 0.1002 REMARK 3 S21: -0.6763 S22: 0.2010 S23: -0.4564 REMARK 3 S31: 0.0399 S32: 0.2877 S33: -0.2749 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7243 44.9379 8.2640 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.2112 REMARK 3 T33: 0.2314 T12: -0.0026 REMARK 3 T13: 0.0195 T23: -0.0496 REMARK 3 L TENSOR REMARK 3 L11: 2.5625 L22: 2.5846 REMARK 3 L33: 2.0547 L12: 0.3114 REMARK 3 L13: 0.2930 L23: 0.1433 REMARK 3 S TENSOR REMARK 3 S11: 0.0511 S12: -0.3867 S13: 0.2951 REMARK 3 S21: 0.2670 S22: -0.0890 S23: 0.3714 REMARK 3 S31: -0.0865 S32: -0.2248 S33: 0.0312 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 241 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5044 23.5980 -0.5249 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: 0.1729 REMARK 3 T33: 0.1861 T12: -0.0505 REMARK 3 T13: -0.0170 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.4750 L22: 2.0871 REMARK 3 L33: 0.7525 L12: -0.9771 REMARK 3 L13: -0.1022 L23: -0.0317 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.0716 S13: -0.2240 REMARK 3 S21: 0.0572 S22: -0.0843 S23: 0.2513 REMARK 3 S31: 0.1154 S32: -0.1046 S33: 0.0906 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J49 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000219929. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62217 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3JUJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICROLYTIC MCSG1 SCREEN H7: 2M REMARK 280 AMMONIUM SULPHATE, 100MM BISTRIS PH 5.5; REMARK 280 BUXEA.00118.C.B1.PS02592 AT 16MG/ML; CRYO: 25% EG IN TWO STEPS; REMARK 280 TRAY 269868 H7, PUCK RPA3-4, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.57500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 67.05500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 67.05500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.28750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 67.05500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 67.05500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.86250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 67.05500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.05500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.28750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 67.05500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.05500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.86250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 36.57500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -255.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 607 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 2 CG CD1 CD2 REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 ASP A 181 CG OD1 OD2 REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 222 CG CD CE NZ REMARK 470 GLU A 228 CG CD OE1 OE2 REMARK 470 LEU B 2 CG CD1 CD2 REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 ARG B 17 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 LEU B 87 CG CD1 CD2 REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 ARG B 91 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 ASP B 181 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 434 O HOH B 609 3555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 12 40.08 -108.52 REMARK 500 VAL A 33 -76.05 65.54 REMARK 500 ASP A 34 22.53 -143.31 REMARK 500 TRP A 179 -80.81 -108.37 REMARK 500 VAL B 33 -71.26 66.10 REMARK 500 ASP B 34 22.27 -147.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUXEA.00118.C RELATED DB: TARGETTRACK DBREF 5J49 A 1 293 UNP Q13WC0 Q13WC0_BURXL 1 293 DBREF 5J49 B 1 293 UNP Q13WC0 Q13WC0_BURXL 1 293 SEQADV 5J49 MET A -7 UNP Q13WC0 INITIATING METHIONINE SEQADV 5J49 ALA A -6 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A -5 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A -4 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A -3 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A -2 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A -1 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS A 0 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 MET B -7 UNP Q13WC0 INITIATING METHIONINE SEQADV 5J49 ALA B -6 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B -5 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B -4 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B -3 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B -2 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B -1 UNP Q13WC0 EXPRESSION TAG SEQADV 5J49 HIS B 0 UNP Q13WC0 EXPRESSION TAG SEQRES 1 A 301 MET ALA HIS HIS HIS HIS HIS HIS MET LEU LYS VAL THR SEQRES 2 A 301 LYS ALA VAL PHE PRO VAL ALA GLY LEU GLY THR ARG PHE SEQRES 3 A 301 LEU PRO ALA THR LYS ALA SER PRO LYS GLU MET LEU PRO SEQRES 4 A 301 ILE VAL ASP LYS PRO LEU ILE GLN TYR ALA VAL GLU GLU SEQRES 5 A 301 ALA MET ALA ALA GLY ILE THR GLU MET ILE PHE VAL THR SEQRES 6 A 301 GLY ARG SER LYS ARG ALA ILE GLU ASP HIS PHE ASP LYS SEQRES 7 A 301 SER TYR GLU ILE GLU ALA GLU LEU GLN ALA ARG GLY LYS SEQRES 8 A 301 ASP LYS LEU LEU GLU LEU VAL ARG SER ILE LYS PRO SER SEQRES 9 A 301 HIS VAL ASP CYS PHE TYR VAL ARG GLN PRO GLU ALA LEU SEQRES 10 A 301 GLY LEU GLY HIS ALA VAL LEU CYS ALA GLU LYS LEU VAL SEQRES 11 A 301 GLY ASP ASN PRO PHE ALA VAL ILE LEU ALA ASP ASP LEU SEQRES 12 A 301 LEU TYR GLY THR PRO PRO VAL MET ALA GLN MET ILE GLU SEQRES 13 A 301 VAL PHE ASP HIS TYR HIS SER SER VAL ILE GLY VAL GLU SEQRES 14 A 301 GLU ILE PRO ALA GLN GLU THR LYS SER TYR GLY ILE VAL SEQRES 15 A 301 ASP GLY LYS GLU TRP GLU ASP SER ILE ILE LYS MET SER SEQRES 16 A 301 GLY ILE VAL GLU LYS PRO GLU PRO ASN VAL ALA PRO SER SEQRES 17 A 301 ASN LEU GLY VAL VAL GLY ARG TYR VAL LEU LYS PRO ARG SEQRES 18 A 301 ILE PHE GLU HIS LEU ARG ALA LEU LYS PRO GLY ALA GLY SEQRES 19 A 301 GLY GLU LEU GLN LEU THR ASP ALA ILE GLN SER LEU LEU SEQRES 20 A 301 ALA ASP GLU GLN VAL LEU ALA TYR LYS TYR HIS GLY THR SEQRES 21 A 301 ARG PHE ASP CYS GLY SER LYS LEU GLY TYR LEU LYS ALA SEQRES 22 A 301 THR VAL GLU PHE ALA LEU ARG HIS PRO GLU VAL ALA ALA SEQRES 23 A 301 ASP PHE GLU GLU TYR LEU ARG THR ARG SER PRO VAL LEU SEQRES 24 A 301 GLU GLY SEQRES 1 B 301 MET ALA HIS HIS HIS HIS HIS HIS MET LEU LYS VAL THR SEQRES 2 B 301 LYS ALA VAL PHE PRO VAL ALA GLY LEU GLY THR ARG PHE SEQRES 3 B 301 LEU PRO ALA THR LYS ALA SER PRO LYS GLU MET LEU PRO SEQRES 4 B 301 ILE VAL ASP LYS PRO LEU ILE GLN TYR ALA VAL GLU GLU SEQRES 5 B 301 ALA MET ALA ALA GLY ILE THR GLU MET ILE PHE VAL THR SEQRES 6 B 301 GLY ARG SER LYS ARG ALA ILE GLU ASP HIS PHE ASP LYS SEQRES 7 B 301 SER TYR GLU ILE GLU ALA GLU LEU GLN ALA ARG GLY LYS SEQRES 8 B 301 ASP LYS LEU LEU GLU LEU VAL ARG SER ILE LYS PRO SER SEQRES 9 B 301 HIS VAL ASP CYS PHE TYR VAL ARG GLN PRO GLU ALA LEU SEQRES 10 B 301 GLY LEU GLY HIS ALA VAL LEU CYS ALA GLU LYS LEU VAL SEQRES 11 B 301 GLY ASP ASN PRO PHE ALA VAL ILE LEU ALA ASP ASP LEU SEQRES 12 B 301 LEU TYR GLY THR PRO PRO VAL MET ALA GLN MET ILE GLU SEQRES 13 B 301 VAL PHE ASP HIS TYR HIS SER SER VAL ILE GLY VAL GLU SEQRES 14 B 301 GLU ILE PRO ALA GLN GLU THR LYS SER TYR GLY ILE VAL SEQRES 15 B 301 ASP GLY LYS GLU TRP GLU ASP SER ILE ILE LYS MET SER SEQRES 16 B 301 GLY ILE VAL GLU LYS PRO GLU PRO ASN VAL ALA PRO SER SEQRES 17 B 301 ASN LEU GLY VAL VAL GLY ARG TYR VAL LEU LYS PRO ARG SEQRES 18 B 301 ILE PHE GLU HIS LEU ARG ALA LEU LYS PRO GLY ALA GLY SEQRES 19 B 301 GLY GLU LEU GLN LEU THR ASP ALA ILE GLN SER LEU LEU SEQRES 20 B 301 ALA ASP GLU GLN VAL LEU ALA TYR LYS TYR HIS GLY THR SEQRES 21 B 301 ARG PHE ASP CYS GLY SER LYS LEU GLY TYR LEU LYS ALA SEQRES 22 B 301 THR VAL GLU PHE ALA LEU ARG HIS PRO GLU VAL ALA ALA SEQRES 23 B 301 ASP PHE GLU GLU TYR LEU ARG THR ARG SER PRO VAL LEU SEQRES 24 B 301 GLU GLY HET SO4 A 300 5 HET SO4 A 301 5 HET SO4 A 302 5 HET EDO B 301 4 HET SO4 B 302 5 HET SO4 B 303 5 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 5(O4 S 2-) FORMUL 6 EDO C2 H6 O2 FORMUL 9 HOH *431(H2 O) HELIX 1 AA1 GLY A 15 LEU A 19 5 5 HELIX 2 AA2 PRO A 20 ALA A 24 5 5 HELIX 3 AA3 PRO A 26 MET A 29 5 4 HELIX 4 AA4 LEU A 37 ALA A 48 1 12 HELIX 5 AA5 SER A 60 ASP A 69 1 10 HELIX 6 AA6 SER A 71 ARG A 81 1 11 HELIX 7 AA7 LYS A 83 SER A 92 1 10 HELIX 8 AA8 GLY A 110 ALA A 118 1 9 HELIX 9 AA9 ALA A 118 GLY A 123 1 6 HELIX 10 AB1 PRO A 141 HIS A 154 1 14 HELIX 11 AB2 PRO A 164 SER A 170 5 7 HELIX 12 AB3 GLU A 194 ALA A 198 5 5 HELIX 13 AB4 PRO A 212 LEU A 221 1 10 HELIX 14 AB5 GLN A 230 ALA A 240 1 11 HELIX 15 AB6 SER A 258 LEU A 271 1 14 HELIX 16 AB7 VAL A 276 ARG A 287 1 12 HELIX 17 AB8 GLY B 15 LEU B 19 5 5 HELIX 18 AB9 PRO B 20 ALA B 24 5 5 HELIX 19 AC1 PRO B 26 MET B 29 5 4 HELIX 20 AC2 LEU B 37 ALA B 48 1 12 HELIX 21 AC3 SER B 60 ASP B 69 1 10 HELIX 22 AC4 SER B 71 ARG B 81 1 11 HELIX 23 AC5 ASP B 84 SER B 92 1 9 HELIX 24 AC6 GLY B 110 ALA B 118 1 9 HELIX 25 AC7 ALA B 118 GLY B 123 1 6 HELIX 26 AC8 PRO B 141 HIS B 154 1 14 HELIX 27 AC9 PRO B 164 SER B 170 5 7 HELIX 28 AD1 GLU B 194 ALA B 198 5 5 HELIX 29 AD2 PRO B 212 LEU B 221 1 10 HELIX 30 AD3 GLN B 230 ALA B 240 1 11 HELIX 31 AD4 SER B 258 LEU B 271 1 14 HELIX 32 AD5 VAL B 276 ARG B 287 1 12 SHEET 1 AA120 LEU A 202 LEU A 210 0 SHEET 2 AA120 SER A 156 GLU A 162 -1 N GLU A 161 O GLY A 203 SHEET 3 AA120 VAL A 244 LYS A 248 1 O LEU A 245 N SER A 156 SHEET 4 AA120 ILE A 183 GLU A 191 -1 N ILE A 184 O ALA A 246 SHEET 5 AA120 GLY A 172 GLU A 178 -1 N ILE A 173 O VAL A 190 SHEET 6 AA120 LEU A 202 LEU A 210 -1 O VAL A 204 N GLY A 172 SHEET 7 AA120 PHE A 127 ILE A 130 -1 N PHE A 127 O LEU A 210 SHEET 8 AA120 LYS A 6 VAL A 11 1 N VAL A 8 O ALA A 128 SHEET 9 AA120 GLU A 52 THR A 57 1 O ILE A 54 N PHE A 9 SHEET 10 AA120 ASP A 99 ARG A 104 1 O ASP A 99 N MET A 53 SHEET 11 AA120 ASP B 99 ARG B 104 -1 O TYR B 102 N TYR A 102 SHEET 12 AA120 GLU B 52 THR B 57 1 N MET B 53 O ASP B 99 SHEET 13 AA120 LYS B 6 VAL B 11 1 N ALA B 7 O ILE B 54 SHEET 14 AA120 PHE B 127 ILE B 130 1 O ALA B 128 N VAL B 8 SHEET 15 AA120 LEU B 202 LEU B 210 -1 O LEU B 210 N PHE B 127 SHEET 16 AA120 GLY B 172 GLU B 180 -1 N GLY B 172 O VAL B 204 SHEET 17 AA120 ILE B 183 GLU B 191 -1 O LYS B 185 N LYS B 177 SHEET 18 AA120 VAL B 244 LYS B 248 -1 O ALA B 246 N ILE B 184 SHEET 19 AA120 SER B 156 GLU B 162 1 N ILE B 158 O LEU B 245 SHEET 20 AA120 LEU B 202 LEU B 210 -1 O GLY B 203 N GLU B 161 SHEET 1 AA2 2 PRO A 31 ILE A 32 0 SHEET 2 AA2 2 LYS A 35 PRO A 36 -1 O LYS A 35 N ILE A 32 SHEET 1 AA3 2 ASP A 134 TYR A 137 0 SHEET 2 AA3 2 THR A 252 ASP A 255 -1 O THR A 252 N TYR A 137 SHEET 1 AA4 2 PRO B 31 ILE B 32 0 SHEET 2 AA4 2 LYS B 35 PRO B 36 -1 O LYS B 35 N ILE B 32 SHEET 1 AA5 2 ASP B 134 TYR B 137 0 SHEET 2 AA5 2 THR B 252 ASP B 255 -1 O THR B 252 N TYR B 137 CISPEP 1 LEU A 19 PRO A 20 0 7.47 CISPEP 2 THR A 139 PRO A 140 0 -1.38 CISPEP 3 LEU B 19 PRO B 20 0 9.68 CISPEP 4 THR B 139 PRO B 140 0 -2.61 SITE 1 AC1 7 LEU A 14 GLY A 15 THR A 16 LYS A 27 SITE 2 AC1 7 ARG A 81 HOH A 490 HOH A 518 SITE 1 AC2 6 ARG A 17 SER A 258 LYS A 259 LEU A 260 SITE 2 AC2 6 GLU A 275 VAL A 276 SITE 1 AC3 6 ASP A 124 ASN A 125 HOH A 434 ASP B 124 SITE 2 AC3 6 ASN B 125 EDO B 301 SITE 1 AC4 8 LYS A 120 LEU A 121 GLY A 123 SO4 A 302 SITE 2 AC4 8 LYS B 120 LEU B 121 HOH B 507 HOH B 535 SITE 1 AC5 7 LEU B 14 GLY B 15 THR B 16 LYS B 27 SITE 2 AC5 7 ARG B 81 HOH B 403 HOH B 559 SITE 1 AC6 5 SER B 258 LYS B 259 LEU B 260 GLU B 275 SITE 2 AC6 5 HOH B 415 CRYST1 134.110 134.110 73.150 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007457 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007457 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013671 0.00000