HEADER HYDROLASE/IMMUNE SYSTEM 01-APR-16 5J57 TITLE V5E1-RTA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 39-302; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VHH SINGLE CHAIN ANTIBODY V5E1; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_COMMON: ALPACA; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RICIN, RTA, SINGLE CHAIN ANTIBODIES (VHH), HYDROLASE-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH REVDAT 6 11-DEC-19 5J57 1 REMARK REVDAT 5 13-SEP-17 5J57 1 REMARK REVDAT 4 12-APR-17 5J57 1 COMPND SOURCE REVDAT 3 01-FEB-17 5J57 1 JRNL REVDAT 2 21-DEC-16 5J57 1 JRNL REVDAT 1 07-DEC-16 5J57 0 JRNL AUTH M.J.RUDOLPH,D.J.VANCE,M.S.CASSIDY,Y.RONG,N.J.MANTIS JRNL TITL STRUCTURAL ANALYSIS OF SINGLE DOMAIN ANTIBODIES BOUND TO A JRNL TITL 2 SECOND NEUTRALIZING HOT SPOT ON RICIN TOXIN'S ENZYMATIC JRNL TITL 3 SUBUNIT. JRNL REF J. BIOL. CHEM. V. 292 872 2017 JRNL REFN ESSN 1083-351X JRNL PMID 27903650 JRNL DOI 10.1074/JBC.M116.758102 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 39956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.6380 - 4.1887 0.94 2533 99 0.1660 0.2125 REMARK 3 2 4.1887 - 3.3256 0.97 2523 152 0.1466 0.1421 REMARK 3 3 3.3256 - 2.9055 0.98 2498 203 0.1620 0.1940 REMARK 3 4 2.9055 - 2.6400 0.99 2602 106 0.1589 0.1722 REMARK 3 5 2.6400 - 2.4508 0.99 2544 134 0.1590 0.1774 REMARK 3 6 2.4508 - 2.3064 0.99 2555 158 0.1574 0.2023 REMARK 3 7 2.3064 - 2.1909 0.98 2534 156 0.1519 0.1768 REMARK 3 8 2.1909 - 2.0955 0.98 2519 179 0.1585 0.2077 REMARK 3 9 2.0955 - 2.0149 0.98 2514 152 0.1578 0.2125 REMARK 3 10 2.0149 - 1.9453 0.99 2558 113 0.1591 0.1809 REMARK 3 11 1.9453 - 1.8845 0.98 2575 125 0.1659 0.1934 REMARK 3 12 1.8845 - 1.8307 0.98 2548 109 0.1777 0.2123 REMARK 3 13 1.8307 - 1.7825 0.98 2541 119 0.1967 0.2436 REMARK 3 14 1.7825 - 1.7390 0.97 2503 117 0.2287 0.2699 REMARK 3 15 1.7390 - 1.6995 0.91 2367 120 0.2517 0.2989 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 44.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.20600 REMARK 3 B22 (A**2) : -4.06180 REMARK 3 B33 (A**2) : 5.26780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.08470 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3150 REMARK 3 ANGLE : 0.816 4276 REMARK 3 CHIRALITY : 0.058 468 REMARK 3 PLANARITY : 0.004 566 REMARK 3 DIHEDRAL : 11.855 1152 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 4:56) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4742 42.8480 53.4587 REMARK 3 T TENSOR REMARK 3 T11: 0.1083 T22: 0.1276 REMARK 3 T33: 0.0995 T12: -0.0137 REMARK 3 T13: 0.0180 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.5990 L22: 2.7300 REMARK 3 L33: 1.3075 L12: -0.3793 REMARK 3 L13: 0.4760 L23: 1.1148 REMARK 3 S TENSOR REMARK 3 S11: -0.0573 S12: 0.0020 S13: 0.1891 REMARK 3 S21: -0.0956 S22: 0.0362 S23: -0.1044 REMARK 3 S31: -0.1863 S32: 0.0938 S33: 0.0344 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 57:97) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4500 39.9953 51.3212 REMARK 3 T TENSOR REMARK 3 T11: 0.0939 T22: 0.1086 REMARK 3 T33: 0.0608 T12: 0.0064 REMARK 3 T13: -0.0184 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 3.6068 L22: 4.3206 REMARK 3 L33: -0.0744 L12: 0.1568 REMARK 3 L13: -0.1334 L23: -0.3951 REMARK 3 S TENSOR REMARK 3 S11: 0.0675 S12: 0.0987 S13: -0.0295 REMARK 3 S21: -0.2644 S22: -0.0488 S23: 0.0418 REMARK 3 S31: -0.1020 S32: -0.0293 S33: 0.0011 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 98:122) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5672 47.7750 52.8191 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1128 REMARK 3 T33: 0.1785 T12: 0.0169 REMARK 3 T13: -0.0464 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.4349 L22: 3.7249 REMARK 3 L33: 3.5361 L12: 0.6124 REMARK 3 L13: -0.7411 L23: -2.2123 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.0440 S13: 0.3506 REMARK 3 S21: -0.1686 S22: 0.1084 S23: 0.3658 REMARK 3 S31: -0.1574 S32: -0.1939 S33: -0.0234 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 123:160) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3589 29.0450 58.1858 REMARK 3 T TENSOR REMARK 3 T11: 0.0822 T22: 0.0739 REMARK 3 T33: 0.1015 T12: -0.0332 REMARK 3 T13: 0.0105 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 4.7120 L22: 1.9263 REMARK 3 L33: 2.2447 L12: -1.0723 REMARK 3 L13: 0.8495 L23: 0.3698 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: -0.0757 S13: -0.2682 REMARK 3 S21: 0.0071 S22: 0.0221 S23: 0.0859 REMARK 3 S31: 0.0923 S32: -0.0614 S33: -0.0133 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 161:180) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4160 32.3064 59.1671 REMARK 3 T TENSOR REMARK 3 T11: 0.1220 T22: 0.1404 REMARK 3 T33: 0.1094 T12: 0.0110 REMARK 3 T13: 0.0033 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 3.1702 L22: 3.2049 REMARK 3 L33: 1.8348 L12: 3.1302 REMARK 3 L13: 1.7678 L23: 1.1697 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: -0.0820 S13: 0.0852 REMARK 3 S21: -0.0587 S22: 0.0421 S23: 0.0179 REMARK 3 S31: 0.0758 S32: -0.0502 S33: 0.0252 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 181:201) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6627 24.4730 60.4481 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.1442 REMARK 3 T33: 0.1293 T12: 0.0317 REMARK 3 T13: -0.0088 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 2.5855 L22: 2.9028 REMARK 3 L33: 6.3731 L12: -0.9850 REMARK 3 L13: -0.8928 L23: 4.1191 REMARK 3 S TENSOR REMARK 3 S11: -0.1347 S12: -0.1719 S13: -0.1705 REMARK 3 S21: -0.0139 S22: 0.1115 S23: -0.0306 REMARK 3 S31: 0.1976 S32: 0.1789 S33: -0.0239 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 202:229) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1929 41.6707 73.7463 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2596 REMARK 3 T33: 0.1185 T12: 0.0154 REMARK 3 T13: 0.0105 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 2.0859 L22: 5.5750 REMARK 3 L33: 3.3047 L12: 0.7538 REMARK 3 L13: 0.6396 L23: 0.1409 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: -0.4713 S13: 0.3550 REMARK 3 S21: 0.3980 S22: -0.0270 S23: 0.0876 REMARK 3 S31: -0.2530 S32: 0.1237 S33: 0.0255 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 230:248) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3024 32.2327 76.8935 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.2864 REMARK 3 T33: 0.1874 T12: 0.0545 REMARK 3 T13: -0.0568 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 4.4677 L22: 8.4029 REMARK 3 L33: 3.6864 L12: 6.1472 REMARK 3 L13: -1.3829 L23: -2.3674 REMARK 3 S TENSOR REMARK 3 S11: 0.3949 S12: -0.5433 S13: -0.3158 REMARK 3 S21: 0.7129 S22: -0.4683 S23: -0.4465 REMARK 3 S31: -0.0964 S32: 0.4668 S33: -0.0594 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 249:267) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9806 50.5837 67.6643 REMARK 3 T TENSOR REMARK 3 T11: 0.2003 T22: 0.2674 REMARK 3 T33: 0.2036 T12: -0.0329 REMARK 3 T13: -0.0090 T23: -0.0689 REMARK 3 L TENSOR REMARK 3 L11: 3.4541 L22: 0.0185 REMARK 3 L33: 1.1390 L12: -0.3247 REMARK 3 L13: 0.5913 L23: -0.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: -0.2979 S13: 0.5028 REMARK 3 S21: 0.0418 S22: -0.0890 S23: 0.0875 REMARK 3 S31: -0.3351 S32: 0.2558 S33: 0.0831 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:17) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6349 -3.7039 43.2944 REMARK 3 T TENSOR REMARK 3 T11: 0.4239 T22: 0.1799 REMARK 3 T33: 0.4666 T12: 0.0266 REMARK 3 T13: 0.1294 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 1.9637 L22: 1.3157 REMARK 3 L33: 0.2190 L12: -0.9360 REMARK 3 L13: -0.4589 L23: -0.0792 REMARK 3 S TENSOR REMARK 3 S11: -0.3569 S12: -0.3008 S13: -0.6191 REMARK 3 S21: 0.4672 S22: 0.1541 S23: 0.7914 REMARK 3 S31: 0.3375 S32: 0.1294 S33: 0.1965 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 18:39) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1341 8.6778 43.7496 REMARK 3 T TENSOR REMARK 3 T11: 0.2445 T22: 0.1445 REMARK 3 T33: 0.2091 T12: 0.0128 REMARK 3 T13: 0.0710 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 4.8639 L22: 7.2245 REMARK 3 L33: 2.5645 L12: -2.4219 REMARK 3 L13: 0.8067 L23: -0.2049 REMARK 3 S TENSOR REMARK 3 S11: -0.2627 S12: -0.1583 S13: -0.6121 REMARK 3 S21: 0.2090 S22: 0.1148 S23: 0.8177 REMARK 3 S31: 0.3771 S32: -0.1695 S33: 0.1302 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 40:51) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3185 6.9722 47.6962 REMARK 3 T TENSOR REMARK 3 T11: 0.4254 T22: 0.3369 REMARK 3 T33: 0.2127 T12: 0.1715 REMARK 3 T13: -0.0600 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.3391 L22: 4.8202 REMARK 3 L33: 4.2597 L12: -0.8966 REMARK 3 L13: 0.7576 L23: -4.5234 REMARK 3 S TENSOR REMARK 3 S11: -0.3658 S12: -1.0207 S13: -0.2532 REMARK 3 S21: 1.0357 S22: 0.5022 S23: -0.2726 REMARK 3 S31: -0.0181 S32: 0.0953 S33: -0.1098 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 52:83) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7031 7.7655 37.1424 REMARK 3 T TENSOR REMARK 3 T11: 0.2075 T22: 0.1031 REMARK 3 T33: 0.1164 T12: 0.0206 REMARK 3 T13: 0.0400 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 5.3179 L22: 2.9469 REMARK 3 L33: 2.6536 L12: -1.3853 REMARK 3 L13: 0.9446 L23: -0.2200 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: 0.0755 S13: -0.0756 REMARK 3 S21: 0.0204 S22: -0.0727 S23: 0.0792 REMARK 3 S31: 0.2954 S32: 0.0588 S33: 0.0619 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 84:98) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9257 -1.5754 44.3585 REMARK 3 T TENSOR REMARK 3 T11: 0.4373 T22: 0.2243 REMARK 3 T33: 0.1959 T12: 0.0997 REMARK 3 T13: 0.1146 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 0.8406 L22: 6.1419 REMARK 3 L33: 1.8087 L12: -1.8213 REMARK 3 L13: 0.1526 L23: 1.7056 REMARK 3 S TENSOR REMARK 3 S11: -0.3062 S12: -0.1532 S13: -0.1635 REMARK 3 S21: 0.2906 S22: 0.2370 S23: 0.0185 REMARK 3 S31: 0.5501 S32: 0.5169 S33: 0.0280 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 99:109) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6883 19.8816 45.6066 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.2127 REMARK 3 T33: 0.2351 T12: 0.0306 REMARK 3 T13: 0.0187 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 7.4865 L22: 2.5415 REMARK 3 L33: 4.9974 L12: -2.3966 REMARK 3 L13: -5.8630 L23: 2.7570 REMARK 3 S TENSOR REMARK 3 S11: 0.2650 S12: 0.4765 S13: 0.1216 REMARK 3 S21: -0.4179 S22: 0.0078 S23: -0.4603 REMARK 3 S31: -0.2253 S32: 0.1245 S33: -0.3737 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 110:128) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4456 0.1429 48.1318 REMARK 3 T TENSOR REMARK 3 T11: 0.4350 T22: 0.1188 REMARK 3 T33: 0.4380 T12: 0.0962 REMARK 3 T13: 0.1669 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.2530 L22: 6.0679 REMARK 3 L33: 1.8508 L12: -2.4900 REMARK 3 L13: -0.7256 L23: 3.0178 REMARK 3 S TENSOR REMARK 3 S11: -0.3947 S12: -0.2950 S13: -0.5337 REMARK 3 S21: 0.7551 S22: -0.0198 S23: 0.8814 REMARK 3 S31: 0.6964 S32: 0.2358 S33: 0.2574 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000219971. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V1.0 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39982 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 33.631 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 7.0 AND 20% PEG 1000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.10800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ILE A 1 REMARK 465 PHE A 2 REMARK 465 PRO A 3 REMARK 465 PRO B 41 REMARK 465 GLY B 42 REMARK 465 LYS B 43 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 528 O HOH A 611 1.89 REMARK 500 O HOH A 513 O HOH A 601 1.93 REMARK 500 OE1 GLU A 102 O HOH A 401 1.94 REMARK 500 OE1 GLU A 61 O HOH A 402 1.97 REMARK 500 O HOH A 514 O HOH A 612 2.03 REMARK 500 O HOH A 467 O HOH A 514 2.06 REMARK 500 O HOH A 442 O HOH A 602 2.06 REMARK 500 O HOH A 539 O HOH A 655 2.06 REMARK 500 NH2 ARG A 235 O HOH A 403 2.12 REMARK 500 NE2 GLN B 121 O HOH B 301 2.15 REMARK 500 CL CL A 304 O HOH A 645 2.17 REMARK 500 O PRO A 261 O HOH A 404 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 618 O HOH B 334 1465 1.91 REMARK 500 O HOH A 486 O HOH B 363 2556 2.10 REMARK 500 O HOH A 611 O HOH A 652 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 92 171.20 179.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 672 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 673 DISTANCE = 5.89 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J56 RELATED DB: PDB DBREF 5J57 A 1 267 UNP P02879 RICI_RICCO 36 302 DBREF 5J57 B 2 128 PDB 5J57 5J57 2 128 SEQADV 5J57 MET A 0 UNP P02879 INITIATING METHIONINE SEQRES 1 A 268 MET ILE PHE PRO LYS GLN TYR PRO ILE ILE ASN PHE THR SEQRES 2 A 268 THR ALA GLY ALA THR VAL GLN SER TYR THR ASN PHE ILE SEQRES 3 A 268 ARG ALA VAL ARG GLY ARG LEU THR THR GLY ALA ASP VAL SEQRES 4 A 268 ARG HIS GLU ILE PRO VAL LEU PRO ASN ARG VAL GLY LEU SEQRES 5 A 268 PRO ILE ASN GLN ARG PHE ILE LEU VAL GLU LEU SER ASN SEQRES 6 A 268 HIS ALA GLU LEU SER VAL THR LEU ALA LEU ASP VAL THR SEQRES 7 A 268 ASN ALA TYR VAL VAL GLY TYR ARG ALA GLY ASN SER ALA SEQRES 8 A 268 TYR PHE PHE HIS PRO ASP ASN GLN GLU ASP ALA GLU ALA SEQRES 9 A 268 ILE THR HIS LEU PHE THR ASP VAL GLN ASN ARG TYR THR SEQRES 10 A 268 PHE ALA PHE GLY GLY ASN TYR ASP ARG LEU GLU GLN LEU SEQRES 11 A 268 ALA GLY ASN LEU ARG GLU ASN ILE GLU LEU GLY ASN GLY SEQRES 12 A 268 PRO LEU GLU GLU ALA ILE SER ALA LEU TYR TYR TYR SER SEQRES 13 A 268 THR GLY GLY THR GLN LEU PRO THR LEU ALA ARG SER PHE SEQRES 14 A 268 ILE ILE CYS ILE GLN MET ILE SER GLU ALA ALA ARG PHE SEQRES 15 A 268 GLN TYR ILE GLU GLY GLU MET ARG THR ARG ILE ARG TYR SEQRES 16 A 268 ASN ARG ARG SER ALA PRO ASP PRO SER VAL ILE THR LEU SEQRES 17 A 268 GLU ASN SER TRP GLY ARG LEU SER THR ALA ILE GLN GLU SEQRES 18 A 268 SER ASN GLN GLY ALA PHE ALA SER PRO ILE GLN LEU GLN SEQRES 19 A 268 ARG ARG ASN GLY SER LYS PHE SER VAL TYR ASP VAL SER SEQRES 20 A 268 ILE LEU ILE PRO ILE ILE ALA LEU MET VAL TYR ARG CYS SEQRES 21 A 268 ALA PRO PRO PRO SER SER GLN PHE SEQRES 1 B 127 VAL GLN LEU ALA GLU THR GLY GLY GLY LEU VAL GLU PRO SEQRES 2 B 127 GLY GLY SER LEU ARG LEU SER CYS ALA ALA PRO GLU PHE SEQRES 3 B 127 ARG LEU GLN TYR TYR THR ALA GLY TRP PHE ARG GLN ALA SEQRES 4 B 127 PRO GLY LYS GLU ARG GLU TRP VAL ALA CYS ILE SER ALA SEQRES 5 B 127 GLY GLY GLY VAL THR TYR TYR THR GLY SER VAL GLN GLY SEQRES 6 B 127 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ARG THR VAL SEQRES 7 B 127 TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 B 127 VAL TYR SER CYS ALA ALA ASP LEU GLU TYR SER GLN ILE SEQRES 9 B 127 MET PRO SER CYS ARG GLY SER TYR GLY VAL ARG GLY GLN SEQRES 10 B 127 GLY THR GLN VAL THR VAL SER SER ALA HIS HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET CL B 201 1 HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CL 5(CL 1-) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 11 HOH *358(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 SER A 155 1 16 HELIX 7 AA7 GLN A 160 PHE A 181 1 22 HELIX 8 AA8 PHE A 181 TYR A 194 1 14 HELIX 9 AA9 ASP A 201 GLU A 220 1 20 HELIX 10 AB1 SER A 246 ILE A 249 5 4 HELIX 11 AB2 ARG B 28 TYR B 32 5 5 HELIX 12 AB3 GLY B 62 GLN B 65 5 4 HELIX 13 AB4 LYS B 87 THR B 91 5 5 HELIX 14 AB5 MET B 106 ARG B 110 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O LEU A 59 N ILE A 9 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O VAL A 70 N LEU A 62 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O VAL A 82 N ALA A 73 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O TYR A 91 N TYR A 84 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O ASN A 113 N ALA A 90 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O VAL A 242 N ILE A 230 SHEET 1 AA4 4 ALA B 5 THR B 7 0 SHEET 2 AA4 4 LEU B 18 ALA B 23 -1 O SER B 21 N THR B 7 SHEET 3 AA4 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 AA4 4 PHE B 68 ASP B 73 -1 N SER B 71 O TYR B 80 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 120 VAL B 124 1 O THR B 123 N VAL B 12 SHEET 3 AA5 6 ALA B 92 ASP B 99 -1 N TYR B 94 O THR B 120 SHEET 4 AA5 6 THR B 33 GLN B 39 -1 N PHE B 37 O SER B 95 SHEET 5 AA5 6 GLU B 46 ILE B 51 -1 O ALA B 49 N TRP B 36 SHEET 6 AA5 6 THR B 58 TYR B 60 -1 O TYR B 59 N CYS B 50 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 120 VAL B 124 1 O THR B 123 N VAL B 12 SHEET 3 AA6 4 ALA B 92 ASP B 99 -1 N TYR B 94 O THR B 120 SHEET 4 AA6 4 VAL B 115 ARG B 116 -1 O VAL B 115 N ALA B 98 SSBOND 1 CYS B 22 CYS B 96 1555 1555 2.04 SSBOND 2 CYS B 50 CYS B 109 1555 1555 2.02 SITE 1 AC1 1 LYS A 239 SITE 1 AC2 5 LEU A 133 ARG A 134 GLU A 135 ILE A 205 SITE 2 AC2 5 HOH A 471 SITE 1 AC3 2 TYR A 123 ASP A 124 SITE 1 AC4 4 ASN A 10 PHE A 24 HOH A 474 HOH A 645 SITE 1 AC5 3 THR A 206 GLN A 231 LYS A 239 SITE 1 AC6 9 VAL A 18 GLN A 19 THR A 22 GLY A 157 SITE 2 AC6 9 GLY A 158 GLN A 160 HOH A 507 GLU B 101 SITE 3 AC6 9 TYR B 102 SITE 1 AC7 5 GLU A 146 THR A 163 ARG A 166 SER A 167 SITE 2 AC7 5 HOH A 407 SITE 1 AC8 4 GLY B 15 GLY B 16 SER B 17 SER B 85 CRYST1 38.692 68.216 71.570 90.00 92.47 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025845 0.000000 0.001117 0.00000 SCALE2 0.000000 0.014659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013985 0.00000