HEADER UNKNOWN FUNCTION 06-APR-16 5J7M TITLE CRYSTAL STRUCTURE OF CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN FROM TITLE 2 KRIBBELLA FLAVIDA DSM 17836 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-120; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: N-TERMINAL CLONING ARTIFACT SNA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KRIBBELLA FLAVIDA; SOURCE 3 ORGANISM_TAXID: 479435; SOURCE 4 STRAIN: DSM 17836 / JCM 10339 / NBRC 14399; SOURCE 5 GENE: KFLA_2934; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PMCSG68 KEYWDS CUPIN 2 CONSERVED BARREL DOMAIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,M.CUFF,G.CHHOR,M.ENDRES,A.JOACHIMIAK REVDAT 4 25-DEC-19 5J7M 1 REMARK REVDAT 3 20-SEP-17 5J7M 1 REMARK REVDAT 2 17-AUG-16 5J7M 1 HEADER KEYWDS AUTHOR JRNL REVDAT 1 27-APR-16 5J7M 0 JRNL AUTH C.CHANG,M.CUFF,G.CHHOR,M.ENDRES,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN JRNL TITL 2 FROM KRIBBELLA FLAVIDA DSM 17836 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2328) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 15017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.340 REMARK 3 FREE R VALUE TEST SET COUNT : 1441 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8560 - 4.4392 0.95 2788 194 0.1446 0.1640 REMARK 3 2 4.4392 - 3.5242 0.96 2801 197 0.1453 0.2017 REMARK 3 3 3.5242 - 3.0789 0.95 2762 200 0.1663 0.2342 REMARK 3 4 3.0789 - 2.7975 0.95 2791 163 0.2039 0.2480 REMARK 3 5 2.7975 - 2.5970 0.95 2872 112 0.2210 0.2591 REMARK 3 6 2.5970 - 2.4439 0.95 2806 143 0.2148 0.3542 REMARK 3 7 2.4439 - 2.3215 0.93 2792 143 0.2284 0.2713 REMARK 3 8 2.3215 - 2.2205 0.85 2542 112 0.2224 0.2809 REMARK 3 9 2.2205 - 2.1350 0.66 1959 100 0.2215 0.2863 REMARK 3 10 2.1350 - 2.0613 0.48 1411 77 0.2251 0.2755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1952 REMARK 3 ANGLE : 0.945 2664 REMARK 3 CHIRALITY : 0.056 302 REMARK 3 PLANARITY : 0.006 345 REMARK 3 DIHEDRAL : 13.749 1125 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6943 26.9642 0.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.1960 REMARK 3 T33: 0.1851 T12: 0.0032 REMARK 3 T13: -0.0084 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.1201 L22: 0.2086 REMARK 3 L33: 0.0178 L12: -0.1549 REMARK 3 L13: -0.0304 L23: 0.0540 REMARK 3 S TENSOR REMARK 3 S11: 0.0959 S12: -0.0404 S13: 0.0430 REMARK 3 S21: -0.0172 S22: 0.0746 S23: -0.0239 REMARK 3 S31: 0.1251 S32: -0.0253 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8173 31.5628 -0.8844 REMARK 3 T TENSOR REMARK 3 T11: 0.1731 T22: 0.1417 REMARK 3 T33: 0.1988 T12: -0.0076 REMARK 3 T13: -0.0156 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.1041 L22: 0.1289 REMARK 3 L33: 0.1274 L12: -0.1058 REMARK 3 L13: 0.0431 L23: -0.1138 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.1511 S13: 0.2238 REMARK 3 S21: 0.0051 S22: 0.0416 S23: -0.0885 REMARK 3 S31: -0.1363 S32: -0.0936 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5282 24.3697 -14.2193 REMARK 3 T TENSOR REMARK 3 T11: 0.1743 T22: 0.1633 REMARK 3 T33: 0.1763 T12: -0.0098 REMARK 3 T13: -0.0225 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 0.1232 L22: 0.0267 REMARK 3 L33: 0.0934 L12: -0.0623 REMARK 3 L13: -0.1086 L23: 0.0544 REMARK 3 S TENSOR REMARK 3 S11: 0.0142 S12: 0.2433 S13: 0.1479 REMARK 3 S21: -0.0359 S22: -0.0618 S23: 0.0562 REMARK 3 S31: 0.1098 S32: 0.0375 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7487 18.7684 -21.2362 REMARK 3 T TENSOR REMARK 3 T11: 0.2516 T22: 0.1800 REMARK 3 T33: 0.2121 T12: 0.0807 REMARK 3 T13: 0.0399 T23: 0.0873 REMARK 3 L TENSOR REMARK 3 L11: 0.1088 L22: 0.1040 REMARK 3 L33: 0.0469 L12: 0.1058 REMARK 3 L13: 0.0255 L23: 0.0263 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: 0.1836 S13: 0.3418 REMARK 3 S21: -0.0673 S22: -0.1341 S23: -0.1079 REMARK 3 S31: -0.1504 S32: 0.0077 S33: -0.0161 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4794 24.0136 -14.7158 REMARK 3 T TENSOR REMARK 3 T11: 0.1791 T22: 0.1409 REMARK 3 T33: 0.1697 T12: 0.0519 REMARK 3 T13: -0.0136 T23: 0.0540 REMARK 3 L TENSOR REMARK 3 L11: 0.1917 L22: 0.2675 REMARK 3 L33: 0.0381 L12: -0.2341 REMARK 3 L13: -0.0928 L23: 0.0975 REMARK 3 S TENSOR REMARK 3 S11: 0.1694 S12: 0.1188 S13: 0.1676 REMARK 3 S21: -0.1276 S22: -0.1353 S23: -0.4375 REMARK 3 S31: 0.1691 S32: 0.2635 S33: 0.0103 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7601 12.2829 -13.1870 REMARK 3 T TENSOR REMARK 3 T11: 0.2217 T22: 0.1045 REMARK 3 T33: 0.3383 T12: -0.0089 REMARK 3 T13: -0.0034 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.0106 L22: 0.0204 REMARK 3 L33: 0.0905 L12: 0.0088 REMARK 3 L13: 0.0228 L23: -0.0017 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: 0.0071 S13: -0.3845 REMARK 3 S21: 0.0826 S22: 0.0551 S23: 0.0924 REMARK 3 S31: 0.1631 S32: 0.0264 S33: 0.0010 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6053 28.7865 -7.1051 REMARK 3 T TENSOR REMARK 3 T11: 0.1857 T22: 0.1351 REMARK 3 T33: 0.1603 T12: -0.0170 REMARK 3 T13: -0.0092 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.0317 L22: 0.0206 REMARK 3 L33: 0.0618 L12: -0.0248 REMARK 3 L13: -0.0314 L23: 0.0063 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: 0.1495 S13: 0.0734 REMARK 3 S21: 0.0235 S22: -0.0822 S23: -0.0076 REMARK 3 S31: 0.0321 S32: -0.1139 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2849 40.2102 -4.8440 REMARK 3 T TENSOR REMARK 3 T11: 0.3156 T22: 0.4858 REMARK 3 T33: 0.2236 T12: -0.2787 REMARK 3 T13: -0.0124 T23: -0.0845 REMARK 3 L TENSOR REMARK 3 L11: 0.0799 L22: 0.3159 REMARK 3 L33: 0.3140 L12: -0.0500 REMARK 3 L13: 0.0410 L23: 0.2698 REMARK 3 S TENSOR REMARK 3 S11: 0.1059 S12: -0.0644 S13: 0.0170 REMARK 3 S21: 0.0124 S22: -0.0462 S23: -0.1053 REMARK 3 S31: -0.2262 S32: 0.1651 S33: 0.1050 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7960 17.5833 -10.8787 REMARK 3 T TENSOR REMARK 3 T11: 0.2485 T22: 0.2410 REMARK 3 T33: 0.2341 T12: 0.0599 REMARK 3 T13: 0.0195 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 0.0591 L22: 0.0248 REMARK 3 L33: 0.0234 L12: 0.0408 REMARK 3 L13: -0.0420 L23: -0.0258 REMARK 3 S TENSOR REMARK 3 S11: 0.0544 S12: 0.2427 S13: 0.1093 REMARK 3 S21: -0.0240 S22: -0.0631 S23: -0.2334 REMARK 3 S31: 0.0693 S32: 0.1344 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5714 20.0309 -1.5090 REMARK 3 T TENSOR REMARK 3 T11: 0.0506 T22: 0.1670 REMARK 3 T33: 0.1891 T12: -0.0007 REMARK 3 T13: -0.0354 T23: 0.0574 REMARK 3 L TENSOR REMARK 3 L11: 0.0415 L22: 0.1586 REMARK 3 L33: 0.5137 L12: -0.0030 REMARK 3 L13: 0.1097 L23: 0.0030 REMARK 3 S TENSOR REMARK 3 S11: 0.1417 S12: -0.0672 S13: 0.1435 REMARK 3 S21: 0.0475 S22: -0.0714 S23: 0.0109 REMARK 3 S31: 0.1789 S32: 0.0360 S33: 0.0031 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0354 18.5414 2.0581 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.1701 REMARK 3 T33: 0.2375 T12: 0.0269 REMARK 3 T13: -0.0373 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 0.0173 L22: 0.0066 REMARK 3 L33: 0.0151 L12: -0.0109 REMARK 3 L13: 0.0167 L23: -0.0103 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: -0.0470 S13: 0.2293 REMARK 3 S21: -0.1630 S22: -0.0546 S23: 0.0053 REMARK 3 S31: 0.0448 S32: 0.1387 S33: 0.0001 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2472 20.0049 9.6012 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1491 REMARK 3 T33: 0.1953 T12: -0.0032 REMARK 3 T13: -0.0658 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.0302 L22: 0.0309 REMARK 3 L33: 0.0621 L12: -0.0122 REMARK 3 L13: -0.0275 L23: 0.0392 REMARK 3 S TENSOR REMARK 3 S11: -0.0335 S12: -0.3174 S13: 0.0264 REMARK 3 S21: -0.0898 S22: 0.0365 S23: -0.1403 REMARK 3 S31: -0.0456 S32: -0.1242 S33: 0.0001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2693 18.6730 14.6335 REMARK 3 T TENSOR REMARK 3 T11: 0.1835 T22: 0.3394 REMARK 3 T33: 0.1371 T12: 0.0050 REMARK 3 T13: -0.0332 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.0890 L22: 0.0384 REMARK 3 L33: 0.0553 L12: -0.0494 REMARK 3 L13: 0.0649 L23: -0.0360 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: -0.2079 S13: -0.1833 REMARK 3 S21: 0.1869 S22: -0.0718 S23: 0.0171 REMARK 3 S31: 0.1016 S32: -0.1573 S33: -0.0156 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9442 23.5780 11.1094 REMARK 3 T TENSOR REMARK 3 T11: 0.1262 T22: 0.2896 REMARK 3 T33: -0.0584 T12: -0.0277 REMARK 3 T13: -0.1182 T23: -0.0615 REMARK 3 L TENSOR REMARK 3 L11: 0.3292 L22: 0.0961 REMARK 3 L33: 0.1890 L12: -0.0964 REMARK 3 L13: 0.1608 L23: 0.0257 REMARK 3 S TENSOR REMARK 3 S11: -0.1550 S12: -0.4377 S13: 0.0748 REMARK 3 S21: 0.0377 S22: 0.2874 S23: 0.0247 REMARK 3 S31: 0.1105 S32: 0.0021 S33: 0.1395 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5120 6.8559 9.7121 REMARK 3 T TENSOR REMARK 3 T11: 0.2100 T22: 0.2280 REMARK 3 T33: 0.2065 T12: -0.0063 REMARK 3 T13: -0.0236 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.0130 L22: 0.0090 REMARK 3 L33: 0.0176 L12: 0.0038 REMARK 3 L13: -0.0180 L23: -0.0049 REMARK 3 S TENSOR REMARK 3 S11: 0.0950 S12: 0.2007 S13: -0.1317 REMARK 3 S21: -0.1153 S22: 0.0756 S23: 0.1686 REMARK 3 S31: 0.1550 S32: -0.1072 S33: 0.0001 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3585 24.2726 3.2608 REMARK 3 T TENSOR REMARK 3 T11: 0.1383 T22: 0.1214 REMARK 3 T33: 0.1018 T12: 0.0005 REMARK 3 T13: -0.0332 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.6318 L22: 0.2129 REMARK 3 L33: 0.0387 L12: 0.0703 REMARK 3 L13: -0.1352 L23: -0.0011 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: -0.0348 S13: 0.2127 REMARK 3 S21: -0.1079 S22: 0.0059 S23: -0.0738 REMARK 3 S31: 0.0464 S32: 0.1275 S33: 0.0308 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6809 42.7151 0.6421 REMARK 3 T TENSOR REMARK 3 T11: 0.5889 T22: 0.1586 REMARK 3 T33: 0.4018 T12: -0.0620 REMARK 3 T13: 0.0567 T23: -0.0690 REMARK 3 L TENSOR REMARK 3 L11: 0.0369 L22: 0.0747 REMARK 3 L33: 0.0150 L12: 0.0513 REMARK 3 L13: -0.0266 L23: -0.0374 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.0589 S13: -0.0183 REMARK 3 S21: 0.0998 S22: -0.0599 S23: -0.1168 REMARK 3 S31: -0.0564 S32: 0.0107 S33: 0.0393 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J7M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791833 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15720 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.72200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, HEPES, ETHANOL, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.32433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.64867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.48650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 100.81083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.16217 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 SER B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 CG OD1 ND2 REMARK 470 ASN B -1 CG OD1 ND2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 15 -121.75 53.14 REMARK 500 ASP A 97 -19.84 -141.19 REMARK 500 ASN B 15 -125.21 49.85 REMARK 500 ASP B 97 -15.53 -140.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 49 OD2 REMARK 620 2 HIS A 51 NE2 97.2 REMARK 620 3 GLU A 55 OE1 174.9 87.3 REMARK 620 4 HIS A 89 NE2 95.0 86.3 87.7 REMARK 620 5 EOH A 201 O 97.3 81.5 80.8 163.6 REMARK 620 6 PEG A 203 O4 94.3 168.4 81.2 94.3 95.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 202 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 49 OD2 REMARK 620 2 HIS B 51 NE2 92.9 REMARK 620 3 GLU B 55 OE1 167.6 86.1 REMARK 620 4 HIS B 89 NE2 96.4 91.1 96.0 REMARK 620 5 EOH B 201 O 87.4 88.7 80.2 176.3 REMARK 620 6 PEG B 203 O1 89.6 176.6 91.8 86.5 93.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 204 DBREF 5J7M A 1 120 UNP D2Q1L0 D2Q1L0_KRIFD 1 120 DBREF 5J7M B 1 120 UNP D2Q1L0 D2Q1L0_KRIFD 1 120 SEQADV 5J7M SER A -2 UNP D2Q1L0 EXPRESSION TAG SEQADV 5J7M ASN A -1 UNP D2Q1L0 EXPRESSION TAG SEQADV 5J7M ALA A 0 UNP D2Q1L0 EXPRESSION TAG SEQADV 5J7M SER B -2 UNP D2Q1L0 EXPRESSION TAG SEQADV 5J7M ASN B -1 UNP D2Q1L0 EXPRESSION TAG SEQADV 5J7M ALA B 0 UNP D2Q1L0 EXPRESSION TAG SEQRES 1 A 123 SER ASN ALA MSE ARG THR PHE ASP LEU VAL THR GLY GLU SEQRES 2 A 123 SER LEU PHE VAL ASN ASP LEU ARG VAL VAL ARG TRP GLU SEQRES 3 A 123 GLN TYR GLY LEU GLY THR ALA MSE PRO PHE GLN ALA MSE SEQRES 4 A 123 TRP TYR SER VAL PRO PRO GLY ASP GLU SER PRO ILE ASP SEQRES 5 A 123 GLN HIS PRO GLU LEU GLU LEU SER ILE VAL VAL ALA GLY SEQRES 6 A 123 THR ALA HIS VAL THR VAL GLY ASP THR VAL HIS GLU VAL SEQRES 7 A 123 PRO HIS GLY ASN ALA PHE LEU LEU ASN SER LEU GLU ALA SEQRES 8 A 123 HIS VAL VAL GLN ASN ARG SER ALA ASP GLU VAL LEU THR SEQRES 9 A 123 VAL PHE SER ALA TYR TRP TYR PRO GLU ALA ALA THR ALA SEQRES 10 A 123 ALA ALA GLU ALA LEU ALA SEQRES 1 B 123 SER ASN ALA MSE ARG THR PHE ASP LEU VAL THR GLY GLU SEQRES 2 B 123 SER LEU PHE VAL ASN ASP LEU ARG VAL VAL ARG TRP GLU SEQRES 3 B 123 GLN TYR GLY LEU GLY THR ALA MSE PRO PHE GLN ALA MSE SEQRES 4 B 123 TRP TYR SER VAL PRO PRO GLY ASP GLU SER PRO ILE ASP SEQRES 5 B 123 GLN HIS PRO GLU LEU GLU LEU SER ILE VAL VAL ALA GLY SEQRES 6 B 123 THR ALA HIS VAL THR VAL GLY ASP THR VAL HIS GLU VAL SEQRES 7 B 123 PRO HIS GLY ASN ALA PHE LEU LEU ASN SER LEU GLU ALA SEQRES 8 B 123 HIS VAL VAL GLN ASN ARG SER ALA ASP GLU VAL LEU THR SEQRES 9 B 123 VAL PHE SER ALA TYR TRP TYR PRO GLU ALA ALA THR ALA SEQRES 10 B 123 ALA ALA GLU ALA LEU ALA MODRES 5J7M MSE A 1 MET MODIFIED RESIDUE MODRES 5J7M MSE A 31 MET MODIFIED RESIDUE MODRES 5J7M MSE A 36 MET MODIFIED RESIDUE MODRES 5J7M MSE B 1 MET MODIFIED RESIDUE MODRES 5J7M MSE B 31 MET MODIFIED RESIDUE MODRES 5J7M MSE B 36 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 31 8 HET MSE A 36 8 HET MSE B 1 8 HET MSE B 31 8 HET MSE B 36 8 HET EOH A 201 3 HET NI A 202 1 HET PEG A 203 7 HET PEG A 204 7 HET ACT A 205 4 HET EOH B 201 3 HET NI B 202 1 HET PEG B 203 7 HET PEG B 204 7 HETNAM MSE SELENOMETHIONINE HETNAM EOH ETHANOL HETNAM NI NICKEL (II) ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ACT ACETATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 EOH 2(C2 H6 O) FORMUL 4 NI 2(NI 2+) FORMUL 5 PEG 4(C4 H10 O3) FORMUL 7 ACT C2 H3 O2 1- FORMUL 12 HOH *70(H2 O) HELIX 1 AA1 GLU A 23 GLY A 26 5 4 HELIX 2 AA2 TYR A 108 LEU A 119 1 12 HELIX 3 AA3 GLU B 23 GLY B 26 5 4 HELIX 4 AA4 TYR B 108 LEU B 119 1 12 SHEET 1 AA1 7 MSE A 1 PHE A 4 0 SHEET 2 AA1 7 ALA B 80 LEU B 83 -1 O LEU B 82 N ARG A 2 SHEET 3 AA1 7 LEU B 54 ALA B 61 -1 N GLU B 55 O LEU B 83 SHEET 4 AA1 7 LEU B 100 TRP B 107 -1 O ALA B 105 N LEU B 56 SHEET 5 AA1 7 GLN B 34 VAL B 40 -1 N VAL B 40 O LEU B 100 SHEET 6 AA1 7 LEU B 17 ARG B 21 -1 N VAL B 20 O TRP B 37 SHEET 7 AA1 7 LEU B 12 VAL B 14 -1 N LEU B 12 O VAL B 19 SHEET 1 AA2 7 LEU A 12 VAL A 14 0 SHEET 2 AA2 7 LEU A 17 ARG A 21 -1 O VAL A 19 N LEU A 12 SHEET 3 AA2 7 GLN A 34 VAL A 40 -1 O TRP A 37 N VAL A 20 SHEET 4 AA2 7 LEU A 100 TRP A 107 -1 O TYR A 106 N GLN A 34 SHEET 5 AA2 7 LEU A 54 ALA A 61 -1 N ILE A 58 O PHE A 103 SHEET 6 AA2 7 ALA A 80 LEU A 83 -1 O LEU A 83 N GLU A 55 SHEET 7 AA2 7 MSE B 1 PHE B 4 -1 O PHE B 4 N ALA A 80 SHEET 1 AA3 3 THR A 71 VAL A 75 0 SHEET 2 AA3 3 ALA A 64 VAL A 68 -1 N ALA A 64 O VAL A 75 SHEET 3 AA3 3 HIS A 89 GLN A 92 -1 O GLN A 92 N HIS A 65 SHEET 1 AA4 3 THR B 71 PRO B 76 0 SHEET 2 AA4 3 THR B 63 VAL B 68 -1 N ALA B 64 O VAL B 75 SHEET 3 AA4 3 HIS B 89 GLN B 92 -1 O VAL B 90 N THR B 67 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ARG A 2 1555 1555 1.34 LINK C ALA A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N PRO A 32 1555 1555 1.34 LINK C ALA A 35 N MSE A 36 1555 1555 1.33 LINK C MSE A 36 N TRP A 37 1555 1555 1.33 LINK OD2 ASP A 49 NI NI A 202 1555 1555 2.21 LINK NE2 HIS A 51 NI NI A 202 1555 1555 2.29 LINK OE1 GLU A 55 NI NI A 202 1555 1555 2.40 LINK NE2 HIS A 89 NI NI A 202 1555 1555 2.55 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ARG B 2 1555 1555 1.33 LINK C ALA B 30 N MSE B 31 1555 1555 1.34 LINK C MSE B 31 N PRO B 32 1555 1555 1.34 LINK C ALA B 35 N MSE B 36 1555 1555 1.33 LINK C MSE B 36 N TRP B 37 1555 1555 1.32 LINK OD2 ASP B 49 NI NI B 202 1555 1555 2.24 LINK NE2 HIS B 51 NI NI B 202 1555 1555 2.29 LINK OE1 GLU B 55 NI NI B 202 1555 1555 2.32 LINK NE2 HIS B 89 NI NI B 202 1555 1555 2.40 LINK O EOH A 201 NI NI A 202 1555 1555 2.79 LINK NI NI A 202 O4 PEG A 203 1555 1555 2.40 LINK O EOH B 201 NI NI B 202 1555 1555 2.63 LINK NI NI B 202 O1 PEG B 203 1555 1555 2.43 SITE 1 AC1 6 MSE A 36 HIS A 51 GLU A 55 TYR A 106 SITE 2 AC1 6 NI A 202 HOH A 334 SITE 1 AC2 6 ASP A 49 HIS A 51 GLU A 55 HIS A 89 SITE 2 AC2 6 EOH A 201 PEG A 203 SITE 1 AC3 5 ASP A 49 GLU A 55 HIS A 89 NI A 202 SITE 2 AC3 5 PEG B 204 SITE 1 AC4 1 ARG A 21 SITE 1 AC5 5 GLU A 10 SER A 11 VAL A 19 ARG A 21 SITE 2 AC5 5 GLU A 23 SITE 1 AC6 6 MSE B 36 ASP B 49 HIS B 51 GLU B 55 SITE 2 AC6 6 NI B 202 PEG B 203 SITE 1 AC7 6 ASP B 49 HIS B 51 GLU B 55 HIS B 89 SITE 2 AC7 6 EOH B 201 PEG B 203 SITE 1 AC8 7 MSE B 36 SER B 46 ASP B 49 GLU B 55 SITE 2 AC8 7 HIS B 89 EOH B 201 NI B 202 SITE 1 AC9 3 PRO A 47 ASP A 49 PEG A 203 CRYST1 61.162 61.162 120.973 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016350 0.009440 0.000000 0.00000 SCALE2 0.000000 0.018879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008266 0.00000