HEADER HYDROLASE 06-APR-16 5J7T TITLE MOLECULAR UNDERSTANDING OF USP7 SUBSTRATE RECOGNITION AND C-TERMINAL TITLE 2 ACTIVATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: USP7; COMPND 5 SYNONYM: DEUBIQUITINATING ENZYME 7,HERPESVIRUS-ASSOCIATED UBIQUITIN- COMPND 6 SPECIFIC PROTEASE,UBIQUITIN THIOESTERASE 7,UBIQUITIN-SPECIFIC- COMPND 7 PROCESSING PROTEASE 7; COMPND 8 EC: 3.4.19.12; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP7, HAUSP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS USP7, HAUSP, DUB, ACTIVATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.MURRAY,L.ROUGE REVDAT 2 27-SEP-23 5J7T 1 JRNL REMARK REVDAT 1 10-AUG-16 5J7T 0 JRNL AUTH L.ROUGE,T.W.BAINBRIDGE,M.KWOK,R.TONG,P.DI LELLO,I.E.WERTZ, JRNL AUTH 2 T.MAURER,J.A.ERNST,J.MURRAY JRNL TITL MOLECULAR UNDERSTANDING OF USP7 SUBSTRATE RECOGNITION AND JRNL TITL 2 C-TERMINAL ACTIVATION. JRNL REF STRUCTURE V. 24 1335 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27452404 JRNL DOI 10.1016/J.STR.2016.05.020 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 19201 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3807 - 6.1179 0.96 2629 129 0.2003 0.2640 REMARK 3 2 6.1179 - 4.8575 1.00 2652 126 0.2361 0.2840 REMARK 3 3 4.8575 - 4.2439 1.00 2614 157 0.2358 0.2657 REMARK 3 4 4.2439 - 3.8561 1.00 2612 135 0.2665 0.3129 REMARK 3 5 3.8561 - 3.5798 0.99 2548 142 0.2874 0.2955 REMARK 3 6 3.5798 - 3.3688 0.99 2598 131 0.3435 0.3624 REMARK 3 7 3.3688 - 3.2001 1.00 2577 151 0.3617 0.3831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 127.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5559 REMARK 3 ANGLE : 0.579 7515 REMARK 3 CHIRALITY : 0.024 807 REMARK 3 PLANARITY : 0.003 992 REMARK 3 DIHEDRAL : 11.361 2118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 211 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5946 16.0877 -30.2961 REMARK 3 T TENSOR REMARK 3 T11: 0.6882 T22: 0.6255 REMARK 3 T33: 1.1056 T12: 0.0156 REMARK 3 T13: 0.1618 T23: 0.1941 REMARK 3 L TENSOR REMARK 3 L11: 2.4908 L22: 6.9449 REMARK 3 L33: 9.5732 L12: -0.7234 REMARK 3 L13: 1.6282 L23: 2.4159 REMARK 3 S TENSOR REMARK 3 S11: -0.6261 S12: 0.4868 S13: -0.3149 REMARK 3 S21: -0.1257 S22: 0.8486 S23: 0.1120 REMARK 3 S31: 0.0463 S32: -0.5635 S33: -0.2113 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 244 THROUGH 378 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3797 15.6138 -16.2685 REMARK 3 T TENSOR REMARK 3 T11: 0.9136 T22: 1.5167 REMARK 3 T33: 1.2926 T12: 0.2713 REMARK 3 T13: 0.0023 T23: 0.3296 REMARK 3 L TENSOR REMARK 3 L11: 6.8600 L22: 2.6534 REMARK 3 L33: 8.2468 L12: -0.2074 REMARK 3 L13: -0.5813 L23: 2.3010 REMARK 3 S TENSOR REMARK 3 S11: -0.5368 S12: -2.0467 S13: -1.1355 REMARK 3 S21: 0.8961 S22: 0.6087 S23: -0.5705 REMARK 3 S31: 1.0149 S32: 1.0558 S33: -0.1978 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 379 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3847 20.3357 -2.6692 REMARK 3 T TENSOR REMARK 3 T11: 1.2593 T22: 1.7795 REMARK 3 T33: 1.1635 T12: 0.3152 REMARK 3 T13: -0.0668 T23: 0.4142 REMARK 3 L TENSOR REMARK 3 L11: 3.5018 L22: 2.2757 REMARK 3 L33: 5.8970 L12: 1.4086 REMARK 3 L13: -0.9601 L23: 3.1463 REMARK 3 S TENSOR REMARK 3 S11: 0.3247 S12: -1.6341 S13: -1.0614 REMARK 3 S21: 1.0918 S22: 0.3335 S23: -0.4153 REMARK 3 S31: 1.0444 S32: 0.7349 S33: -0.6660 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 427 THROUGH 469 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.6731 28.3384 -17.1754 REMARK 3 T TENSOR REMARK 3 T11: 0.8238 T22: 0.7674 REMARK 3 T33: 1.0062 T12: 0.0815 REMARK 3 T13: 0.1007 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 2.7795 L22: 6.9241 REMARK 3 L33: 7.3509 L12: 1.8677 REMARK 3 L13: 1.3176 L23: 0.8024 REMARK 3 S TENSOR REMARK 3 S11: -0.0338 S12: -0.8448 S13: -0.4497 REMARK 3 S21: 0.9158 S22: 0.5196 S23: -1.0136 REMARK 3 S31: -0.4602 S32: 0.0124 S33: -0.4044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 470 THROUGH 510 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.3731 25.2232 -24.5053 REMARK 3 T TENSOR REMARK 3 T11: 0.8475 T22: 1.0962 REMARK 3 T33: 0.8524 T12: 0.1205 REMARK 3 T13: 0.0781 T23: 0.1890 REMARK 3 L TENSOR REMARK 3 L11: 8.8015 L22: 5.6519 REMARK 3 L33: 3.8627 L12: -4.1781 REMARK 3 L13: -1.3054 L23: 3.2203 REMARK 3 S TENSOR REMARK 3 S11: -0.3711 S12: -0.1738 S13: -0.3912 REMARK 3 S21: 0.0941 S22: -0.2681 S23: 0.2454 REMARK 3 S31: -1.1067 S32: -1.1778 S33: 0.9074 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 511 THROUGH 561 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6643 13.4525 -36.8305 REMARK 3 T TENSOR REMARK 3 T11: 0.6631 T22: 0.9017 REMARK 3 T33: 1.2543 T12: -0.0101 REMARK 3 T13: 0.0210 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 2.0863 L22: 6.1813 REMARK 3 L33: 8.7076 L12: -1.4637 REMARK 3 L13: -2.2640 L23: 3.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.1330 S12: 0.0435 S13: -0.9368 REMARK 3 S21: -0.6748 S22: -0.0005 S23: -0.6116 REMARK 3 S31: 0.1428 S32: 0.0130 S33: -0.4015 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 563 THROUGH 627 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.8688 -27.4341 -52.0505 REMARK 3 T TENSOR REMARK 3 T11: 1.2382 T22: 1.1048 REMARK 3 T33: 1.0528 T12: -0.3930 REMARK 3 T13: -0.0424 T23: 0.0581 REMARK 3 L TENSOR REMARK 3 L11: 6.4882 L22: 5.1151 REMARK 3 L33: 2.1674 L12: 0.4785 REMARK 3 L13: -0.1955 L23: -0.1939 REMARK 3 S TENSOR REMARK 3 S11: -0.5954 S12: 1.1957 S13: 0.8046 REMARK 3 S21: -0.3822 S22: 0.4183 S23: -0.9095 REMARK 3 S31: -1.3409 S32: 1.0533 S33: 0.3791 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 628 THROUGH 647 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.8617 -22.6909 -51.6549 REMARK 3 T TENSOR REMARK 3 T11: 1.3414 T22: 1.1014 REMARK 3 T33: 1.2556 T12: -0.2581 REMARK 3 T13: -0.5030 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 5.7499 L22: 7.1361 REMARK 3 L33: 0.6568 L12: 0.1115 REMARK 3 L13: 1.5812 L23: 0.1952 REMARK 3 S TENSOR REMARK 3 S11: -0.6686 S12: 0.9997 S13: 1.4164 REMARK 3 S21: -0.4366 S22: 0.8681 S23: 0.6271 REMARK 3 S31: -0.5173 S32: 2.0214 S33: 0.3592 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 648 THROUGH 670 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.2910 -26.1915 -53.4820 REMARK 3 T TENSOR REMARK 3 T11: 1.1660 T22: 1.5883 REMARK 3 T33: 1.1532 T12: -0.3152 REMARK 3 T13: -0.0928 T23: 0.0661 REMARK 3 L TENSOR REMARK 3 L11: 4.5187 L22: 2.8147 REMARK 3 L33: 9.7672 L12: 2.4535 REMARK 3 L13: 3.1475 L23: -1.2661 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: 1.4643 S13: 0.5901 REMARK 3 S21: 1.0395 S22: 0.0641 S23: -2.2173 REMARK 3 S31: -0.1814 S32: 1.0271 S33: 0.1501 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 671 THROUGH 770 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.8675 -41.8506 -47.9740 REMARK 3 T TENSOR REMARK 3 T11: 0.9766 T22: 0.5248 REMARK 3 T33: 0.7009 T12: -0.0923 REMARK 3 T13: -0.0815 T23: -0.0994 REMARK 3 L TENSOR REMARK 3 L11: 9.1363 L22: 4.7724 REMARK 3 L33: 7.7894 L12: -0.4113 REMARK 3 L13: 0.2648 L23: -0.9545 REMARK 3 S TENSOR REMARK 3 S11: -0.4379 S12: 0.5008 S13: -0.3991 REMARK 3 S21: -0.6067 S22: 0.3976 S23: -0.0942 REMARK 3 S31: 0.0827 S32: -0.2955 S33: 0.0167 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 771 THROUGH 830 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.0691 -42.0791 -20.3857 REMARK 3 T TENSOR REMARK 3 T11: 1.3421 T22: 1.2357 REMARK 3 T33: 0.9836 T12: 0.2571 REMARK 3 T13: -0.2641 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 1.7516 L22: 2.7138 REMARK 3 L33: 5.1267 L12: -0.0025 REMARK 3 L13: -1.2754 L23: 0.5106 REMARK 3 S TENSOR REMARK 3 S11: 0.4058 S12: -0.5487 S13: -0.7715 REMARK 3 S21: 0.0376 S22: 0.2111 S23: -0.3670 REMARK 3 S31: 1.0284 S32: 1.4252 S33: -0.8026 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 831 THROUGH 850 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.2439 -31.6571 -8.0448 REMARK 3 T TENSOR REMARK 3 T11: 1.2070 T22: 1.7880 REMARK 3 T33: 1.1699 T12: -0.2803 REMARK 3 T13: -0.4639 T23: 0.0668 REMARK 3 L TENSOR REMARK 3 L11: 2.8292 L22: 2.2078 REMARK 3 L33: 7.8500 L12: 1.5484 REMARK 3 L13: -1.7419 L23: -3.0909 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: 1.2769 S13: 0.4377 REMARK 3 S21: 0.8481 S22: 0.3719 S23: -0.5041 REMARK 3 S31: -0.0691 S32: 1.7928 S33: -0.1143 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 851 THROUGH 881 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.5252 -29.2958 -13.9768 REMARK 3 T TENSOR REMARK 3 T11: 1.2040 T22: 1.7783 REMARK 3 T33: 0.8843 T12: 0.1540 REMARK 3 T13: -0.2982 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 6.4960 L22: 4.8357 REMARK 3 L33: 2.1500 L12: 1.1533 REMARK 3 L13: -2.3020 L23: 0.6988 REMARK 3 S TENSOR REMARK 3 S11: 0.0564 S12: 0.7279 S13: 0.3415 REMARK 3 S21: -0.4372 S22: 0.0625 S23: 0.0612 REMARK 3 S31: -0.8288 S32: 0.6666 S33: 0.2354 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5J7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220095. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19259 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 74.245 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1NB8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, 0.2M TRI-POTASSIUM CITRATE, REMARK 280 PH 8.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 98.36500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 113.18500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 98.36500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 113.18500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 98.36500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 113.18500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 98.36500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 113.18500 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 113.18500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 113.18500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 113.18500 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 113.18500 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 98.36500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 98.36500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 98.36500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 52.16500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 98.36500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 335 CG CD CE NZ REMARK 470 TYR A 845 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 846 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 847 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 503 NZ LYS A 841 2455 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 221 18.41 56.38 REMARK 500 CYS A 223 -138.06 63.05 REMARK 500 MET A 244 42.81 -93.09 REMARK 500 SER A 253 26.12 -142.55 REMARK 500 LYS A 254 20.33 -154.25 REMARK 500 PHE A 283 27.71 -145.76 REMARK 500 PHE A 291 -45.59 -137.08 REMARK 500 HIS A 294 -165.35 -114.62 REMARK 500 LYS A 391 65.44 -156.48 REMARK 500 PHE A 409 47.35 -109.68 REMARK 500 ASP A 444 67.42 -164.14 REMARK 500 ALA A 446 49.61 -88.92 REMARK 500 HIS A 451 -57.08 -121.27 REMARK 500 HIS A 461 50.06 -94.38 REMARK 500 ASN A 470 75.12 -116.29 REMARK 500 ASP A 482 -122.83 53.77 REMARK 500 ILE A 494 -72.09 -113.44 REMARK 500 ASP A 502 52.56 -143.22 REMARK 500 VAL A 507 -118.14 54.49 REMARK 500 LEU A 528 42.20 -87.88 REMARK 500 LEU A 563 34.12 39.93 REMARK 500 ASP A 582 -174.76 70.18 REMARK 500 ASN A 645 39.74 -88.85 REMARK 500 ASN A 741 -1.45 75.76 REMARK 500 ASP A 750 45.36 -99.03 REMARK 500 GLU A 759 72.46 48.67 REMARK 500 ASN A 777 47.55 -87.39 REMARK 500 ASP A 847 7.00 59.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 5J7T A 211 881 UNP Q93009 UBP7_HUMAN 195 865 SEQRES 1 A 671 THR GLY TYR VAL GLY LEU LYS ASN GLN GLY ALA THR CYS SEQRES 2 A 671 TYR MET ASN SER LEU LEU GLN THR LEU PHE PHE THR ASN SEQRES 3 A 671 GLN LEU ARG LYS ALA VAL TYR MET MET PRO THR GLU GLY SEQRES 4 A 671 ASP ASP SER SER LYS SER VAL PRO LEU ALA LEU GLN ARG SEQRES 5 A 671 VAL PHE TYR GLU LEU GLN HIS SER ASP LYS PRO VAL GLY SEQRES 6 A 671 THR LYS LYS LEU THR LYS SER PHE GLY TRP GLU THR LEU SEQRES 7 A 671 ASP SER PHE MET GLN HIS ASP VAL GLN GLU LEU CYS ARG SEQRES 8 A 671 VAL LEU LEU ASP ASN VAL GLU ASN LYS MET LYS GLY THR SEQRES 9 A 671 CYS VAL GLU GLY THR ILE PRO LYS LEU PHE ARG GLY LYS SEQRES 10 A 671 MET VAL SER TYR ILE GLN CYS LYS GLU VAL ASP TYR ARG SEQRES 11 A 671 SER ASP ARG ARG GLU ASP TYR TYR ASP ILE GLN LEU SER SEQRES 12 A 671 ILE LYS GLY LYS LYS ASN ILE PHE GLU SER PHE VAL ASP SEQRES 13 A 671 TYR VAL ALA VAL GLU GLN LEU ASP GLY ASP ASN LYS TYR SEQRES 14 A 671 ASP ALA GLY GLU HIS GLY LEU GLN GLU ALA GLU LYS GLY SEQRES 15 A 671 VAL LYS PHE LEU THR LEU PRO PRO VAL LEU HIS LEU GLN SEQRES 16 A 671 LEU MET ARG PHE MET TYR ASP PRO GLN THR ASP GLN ASN SEQRES 17 A 671 ILE LYS ILE ASN ASP ARG PHE GLU PHE PRO GLU GLN LEU SEQRES 18 A 671 PRO LEU ASP GLU PHE LEU GLN LYS THR ASP PRO LYS ASP SEQRES 19 A 671 PRO ALA ASN TYR ILE LEU HIS ALA VAL LEU VAL HIS SER SEQRES 20 A 671 GLY ASP ASN HIS GLY GLY HIS TYR VAL VAL TYR LEU ASN SEQRES 21 A 671 PRO LYS GLY ASP GLY LYS TRP CYS LYS PHE ASP ASP ASP SEQRES 22 A 671 VAL VAL SER ARG CYS THR LYS GLU GLU ALA ILE GLU HIS SEQRES 23 A 671 ASN TYR GLY GLY HIS ASP ASP ASP LEU SER VAL ARG HIS SEQRES 24 A 671 CYS THR ASN ALA TYR MET LEU VAL TYR ILE ARG GLU SER SEQRES 25 A 671 LYS LEU SER GLU VAL LEU GLN ALA VAL THR ASP HIS ASP SEQRES 26 A 671 ILE PRO GLN GLN LEU VAL GLU ARG LEU GLN GLU GLU LYS SEQRES 27 A 671 ARG ILE GLU ALA GLN LYS ARG LYS GLU ARG GLN GLU ALA SEQRES 28 A 671 HIS LEU TYR MET GLN VAL GLN ILE VAL ALA GLU ASP GLN SEQRES 29 A 671 PHE CYS GLY HIS GLN GLY ASN ASP MET TYR ASP GLU GLU SEQRES 30 A 671 LYS VAL LYS TYR THR VAL PHE LYS VAL LEU LYS ASN SER SEQRES 31 A 671 SER LEU ALA GLU PHE VAL GLN SER LEU SER GLN THR MET SEQRES 32 A 671 GLY PHE PRO GLN ASP GLN ILE ARG LEU TRP PRO MET GLN SEQRES 33 A 671 ALA ARG SER ASN GLY THR LYS ARG PRO ALA MET LEU ASP SEQRES 34 A 671 ASN GLU ALA ASP GLY ASN LYS THR MET ILE GLU LEU SER SEQRES 35 A 671 ASP ASN GLU ASN PRO TRP THR ILE PHE LEU GLU THR VAL SEQRES 36 A 671 ASP PRO GLU LEU ALA ALA SER GLY ALA THR LEU PRO LYS SEQRES 37 A 671 PHE ASP LYS ASP HIS ASP VAL MET LEU PHE LEU LYS MET SEQRES 38 A 671 TYR ASP PRO LYS THR ARG SER LEU ASN TYR CYS GLY HIS SEQRES 39 A 671 ILE TYR THR PRO ILE SER CYS LYS ILE ARG ASP LEU LEU SEQRES 40 A 671 PRO VAL MET CYS ASP ARG ALA GLY PHE ILE GLN ASP THR SEQRES 41 A 671 SER LEU ILE LEU TYR GLU GLU VAL LYS PRO ASN LEU THR SEQRES 42 A 671 GLU ARG ILE GLN ASP TYR ASP VAL SER LEU ASP LYS ALA SEQRES 43 A 671 LEU ASP GLU LEU MET ASP GLY ASP ILE ILE VAL PHE GLN SEQRES 44 A 671 LYS ASP ASP PRO GLU ASN ASP ASN SER GLU LEU PRO THR SEQRES 45 A 671 ALA LYS GLU TYR PHE ARG ASP LEU TYR HIS ARG VAL ASP SEQRES 46 A 671 VAL ILE PHE CYS ASP LYS THR ILE PRO ASN ASP PRO GLY SEQRES 47 A 671 PHE VAL VAL THR LEU SER ASN ARG MET ASN TYR PHE GLN SEQRES 48 A 671 VAL ALA LYS THR VAL ALA GLN ARG LEU ASN THR ASP PRO SEQRES 49 A 671 MET LEU LEU GLN PHE PHE LYS SER GLN GLY TYR ARG ASP SEQRES 50 A 671 GLY PRO GLY ASN PRO LEU ARG HIS ASN TYR GLU GLY THR SEQRES 51 A 671 LEU ARG ASP LEU LEU GLN PHE PHE LYS PRO ARG GLN PRO SEQRES 52 A 671 LYS LYS LEU TYR TYR GLN GLN LEU HELIX 1 AA1 TYR A 224 PHE A 234 1 11 HELIX 2 AA2 THR A 235 MET A 244 1 10 HELIX 3 AA3 SER A 255 SER A 270 1 16 HELIX 4 AA4 THR A 276 SER A 282 1 7 HELIX 5 AA5 ASP A 295 LYS A 312 1 18 HELIX 6 AA6 GLY A 318 ARG A 325 1 8 HELIX 7 AA7 ASN A 359 VAL A 368 1 10 HELIX 8 AA8 THR A 489 ILE A 494 1 6 HELIX 9 AA9 GLU A 495 TYR A 498 5 4 HELIX 10 AB1 LYS A 523 LEU A 528 1 6 HELIX 11 AB2 THR A 532 ILE A 536 5 5 HELIX 12 AB3 PRO A 537 HIS A 562 1 26 HELIX 13 AB4 ALA A 571 PHE A 575 5 5 HELIX 14 AB5 SER A 601 GLY A 614 1 14 HELIX 15 AB6 THR A 647 SER A 652 1 6 HELIX 16 AB7 ASP A 666 ALA A 674 1 9 HELIX 17 AB8 LYS A 712 ASP A 715 5 4 HELIX 18 AB9 LEU A 716 GLY A 725 1 10 HELIX 19 AC1 SER A 752 LEU A 757 1 6 HELIX 20 AC2 ASP A 772 ASN A 777 5 6 HELIX 21 AC3 THR A 782 HIS A 792 1 11 HELIX 22 AC4 ASN A 818 LEU A 830 1 13 HELIX 23 AC5 ASP A 833 MET A 835 5 3 HELIX 24 AC6 THR A 860 LEU A 865 1 6 SHEET 1 AA1 3 ARG A 343 TYR A 347 0 SHEET 2 AA1 3 GLY A 326 SER A 330 -1 N MET A 328 O GLU A 345 SHEET 3 AA1 3 VAL A 393 PHE A 395 -1 O LYS A 394 N VAL A 329 SHEET 1 AA2 5 ASP A 349 LEU A 352 0 SHEET 2 AA2 5 VAL A 401 LEU A 406 1 O HIS A 403 N ILE A 350 SHEET 3 AA2 5 THR A 511 ARG A 520 -1 O TYR A 514 N LEU A 406 SHEET 4 AA2 5 ASN A 447 ASP A 459 -1 N ILE A 449 O ILE A 519 SHEET 5 AA2 5 GLN A 430 PRO A 432 -1 N LEU A 431 O TYR A 448 SHEET 1 AA3 7 ASP A 349 LEU A 352 0 SHEET 2 AA3 7 VAL A 401 LEU A 406 1 O HIS A 403 N ILE A 350 SHEET 3 AA3 7 THR A 511 ARG A 520 -1 O TYR A 514 N LEU A 406 SHEET 4 AA3 7 ASN A 447 ASP A 459 -1 N ILE A 449 O ILE A 519 SHEET 5 AA3 7 GLY A 462 LEU A 469 -1 O VAL A 466 N VAL A 455 SHEET 6 AA3 7 CYS A 478 ASP A 481 -1 O PHE A 480 N VAL A 467 SHEET 7 AA3 7 VAL A 484 ARG A 487 -1 O VAL A 484 N ASP A 481 SHEET 1 AA4 2 TYR A 379 GLY A 382 0 SHEET 2 AA4 2 GLY A 385 GLN A 387 -1 O GLY A 385 N ALA A 381 SHEET 1 AA5 5 THR A 592 LEU A 597 0 SHEET 2 AA5 5 TYR A 564 VAL A 570 -1 N MET A 565 O VAL A 596 SHEET 3 AA5 5 TRP A 658 THR A 664 1 O TRP A 658 N GLN A 568 SHEET 4 AA5 5 ILE A 620 ALA A 627 -1 N TRP A 623 O PHE A 661 SHEET 5 AA5 5 LYS A 633 PRO A 635 -1 O ARG A 634 N GLN A 626 SHEET 1 AA6 5 SER A 698 PRO A 708 0 SHEET 2 AA6 5 ASP A 684 ASP A 693 -1 N MET A 691 O ASN A 700 SHEET 3 AA6 5 ASP A 764 LYS A 770 1 O ASP A 764 N PHE A 688 SHEET 4 AA6 5 LEU A 732 LYS A 739 -1 N TYR A 735 O VAL A 767 SHEET 5 AA6 5 LEU A 742 ARG A 745 -1 O GLU A 744 N GLU A 736 SHEET 1 AA7 4 PHE A 809 SER A 814 0 SHEET 2 AA7 4 ARG A 793 ASP A 800 -1 N VAL A 796 O VAL A 811 SHEET 3 AA7 4 LYS A 875 GLN A 880 1 O TYR A 878 N CYS A 799 SHEET 4 AA7 4 LEU A 837 PHE A 840 -1 N PHE A 840 O TYR A 877 CISPEP 1 PRO A 413 GLN A 414 0 -0.57 CISPEP 2 GLN A 414 THR A 415 0 0.76 CISPEP 3 THR A 415 ASP A 416 0 -4.99 CISPEP 4 ASP A 416 GLN A 417 0 -4.15 CISPEP 5 ARG A 508 HIS A 509 0 1.14 CISPEP 6 ASN A 656 PRO A 657 0 2.66 CRYST1 104.330 196.730 226.370 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005083 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004418 0.00000