data_5J8O # _entry.id 5J8O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5J8O pdb_00005j8o 10.2210/pdb5j8o/pdb WWPDB D_1000220140 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-04-27 2 'Structure model' 1 1 2016-09-14 3 'Structure model' 1 2 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'GLU A 60 HAS WRONG CHIRALITY AT ATOM CA' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5J8O _pdbx_database_status.recvd_initial_deposition_date 2016-04-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zak, K.M.' 1 'Grudnik, P.' 2 'Guzik, K.' 3 'Zieba, B.J.' 4 'Musielak, B.' 5 'Doemling, P.' 6 'Dubin, G.' 7 'Holak, T.A.' 8 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Oncotarget _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1949-2553 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 30323 _citation.page_last 30335 _citation.title 'Structural basis for small molecule targeting of the programmed death ligand 1 (PD-L1).' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.18632/oncotarget.8730 _citation.pdbx_database_id_PubMed 27083005 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zak, K.M.' 1 ? primary 'Grudnik, P.' 2 ? primary 'Guzik, K.' 3 ? primary 'Zieba, B.J.' 4 ? primary 'Musielak, B.' 5 ? primary 'Domling, A.' 6 ? primary 'Dubin, G.' 7 ? primary 'Holak, T.A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Programmed cell death 1 ligand 1' 14126.172 2 ? ? ? ? 2 non-polymer syn ;(2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid ; 494.420 1 ? ? ? ? 3 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Programmed death ligand 1,B7 homolog 1,B7-H1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNA ALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYAAALEHH ; _entity_poly.pdbx_seq_one_letter_code_can ;AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNA ALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYAAALEHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid ; 6GZ 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PHE n 1 3 THR n 1 4 VAL n 1 5 THR n 1 6 VAL n 1 7 PRO n 1 8 LYS n 1 9 ASP n 1 10 LEU n 1 11 TYR n 1 12 VAL n 1 13 VAL n 1 14 GLU n 1 15 TYR n 1 16 GLY n 1 17 SER n 1 18 ASN n 1 19 MET n 1 20 THR n 1 21 ILE n 1 22 GLU n 1 23 CYS n 1 24 LYS n 1 25 PHE n 1 26 PRO n 1 27 VAL n 1 28 GLU n 1 29 LYS n 1 30 GLN n 1 31 LEU n 1 32 ASP n 1 33 LEU n 1 34 ALA n 1 35 ALA n 1 36 LEU n 1 37 ILE n 1 38 VAL n 1 39 TYR n 1 40 TRP n 1 41 GLU n 1 42 MET n 1 43 GLU n 1 44 ASP n 1 45 LYS n 1 46 ASN n 1 47 ILE n 1 48 ILE n 1 49 GLN n 1 50 PHE n 1 51 VAL n 1 52 HIS n 1 53 GLY n 1 54 GLU n 1 55 GLU n 1 56 ASP n 1 57 LEU n 1 58 LYS n 1 59 VAL n 1 60 GLN n 1 61 HIS n 1 62 SER n 1 63 SER n 1 64 TYR n 1 65 ARG n 1 66 GLN n 1 67 ARG n 1 68 ALA n 1 69 ARG n 1 70 LEU n 1 71 LEU n 1 72 LYS n 1 73 ASP n 1 74 GLN n 1 75 LEU n 1 76 SER n 1 77 LEU n 1 78 GLY n 1 79 ASN n 1 80 ALA n 1 81 ALA n 1 82 LEU n 1 83 GLN n 1 84 ILE n 1 85 THR n 1 86 ASP n 1 87 VAL n 1 88 LYS n 1 89 LEU n 1 90 GLN n 1 91 ASP n 1 92 ALA n 1 93 GLY n 1 94 VAL n 1 95 TYR n 1 96 ARG n 1 97 CYS n 1 98 MET n 1 99 ILE n 1 100 SER n 1 101 TYR n 1 102 GLY n 1 103 GLY n 1 104 ALA n 1 105 ASP n 1 106 TYR n 1 107 LYS n 1 108 ARG n 1 109 ILE n 1 110 THR n 1 111 VAL n 1 112 LYS n 1 113 VAL n 1 114 ASN n 1 115 ALA n 1 116 PRO n 1 117 TYR n 1 118 ALA n 1 119 ALA n 1 120 ALA n 1 121 LEU n 1 122 GLU n 1 123 HIS n 1 124 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 124 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CD274, B7H1, PDCD1L1, PDCD1LG1, PDL1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6GZ non-polymer . ;(2R)-1-({3-bromo-4-[(2-methyl[1,1'-biphenyl]-3-yl)methoxy]phenyl}methyl)piperidine-2-carboxylic acid ; ? 'C27 H28 Br N O3' 494.420 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 18 18 ALA ALA A . n A 1 2 PHE 2 19 19 PHE PHE A . n A 1 3 THR 3 20 20 THR THR A . n A 1 4 VAL 4 21 21 VAL VAL A . n A 1 5 THR 5 22 22 THR THR A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 PRO 7 24 24 PRO PRO A . n A 1 8 LYS 8 25 25 LYS LYS A . n A 1 9 ASP 9 26 26 ASP ASP A . n A 1 10 LEU 10 27 27 LEU LEU A . n A 1 11 TYR 11 28 28 TYR TYR A . n A 1 12 VAL 12 29 29 VAL VAL A . n A 1 13 VAL 13 30 30 VAL VAL A . n A 1 14 GLU 14 31 31 GLU GLU A . n A 1 15 TYR 15 32 32 TYR TYR A . n A 1 16 GLY 16 33 33 GLY GLY A . n A 1 17 SER 17 34 34 SER SER A . n A 1 18 ASN 18 35 35 ASN ASN A . n A 1 19 MET 19 36 36 MET MET A . n A 1 20 THR 20 37 37 THR THR A . n A 1 21 ILE 21 38 38 ILE ILE A . n A 1 22 GLU 22 39 39 GLU GLU A . n A 1 23 CYS 23 40 40 CYS CYS A . n A 1 24 LYS 24 41 41 LYS LYS A . n A 1 25 PHE 25 42 42 PHE PHE A . n A 1 26 PRO 26 43 43 PRO PRO A . n A 1 27 VAL 27 44 44 VAL VAL A . n A 1 28 GLU 28 45 45 GLU GLU A . n A 1 29 LYS 29 46 46 LYS LYS A . n A 1 30 GLN 30 47 47 GLN GLU A . n A 1 31 LEU 31 48 48 LEU LEU A . n A 1 32 ASP 32 49 49 ASP ASP A . n A 1 33 LEU 33 50 50 LEU LEU A . n A 1 34 ALA 34 51 51 ALA ALA A . n A 1 35 ALA 35 52 52 ALA ALA A . n A 1 36 LEU 36 53 53 LEU LEU A . n A 1 37 ILE 37 54 54 ILE ILE A . n A 1 38 VAL 38 55 55 VAL VAL A . n A 1 39 TYR 39 56 56 TYR TYR A . n A 1 40 TRP 40 57 57 TRP TRP A . n A 1 41 GLU 41 58 58 GLU GLU A . n A 1 42 MET 42 59 59 MET MET A . n A 1 43 GLU 43 60 60 GLU GLU A . n A 1 44 ASP 44 61 61 ASP ASP A . n A 1 45 LYS 45 62 62 LYS LYS A . n A 1 46 ASN 46 63 63 ASN ASN A . n A 1 47 ILE 47 64 64 ILE ILE A . n A 1 48 ILE 48 65 65 ILE ILE A . n A 1 49 GLN 49 66 66 GLN GLN A . n A 1 50 PHE 50 67 67 PHE PHE A . n A 1 51 VAL 51 68 68 VAL VAL A . n A 1 52 HIS 52 69 69 HIS HIS A . n A 1 53 GLY 53 70 70 GLY GLY A . n A 1 54 GLU 54 71 71 GLU GLU A . n A 1 55 GLU 55 72 72 GLU GLU A . n A 1 56 ASP 56 73 73 ASP ASP A . n A 1 57 LEU 57 74 74 LEU LEU A . n A 1 58 LYS 58 75 75 LYS LYS A . n A 1 59 VAL 59 76 76 VAL VAL A . n A 1 60 GLN 60 77 77 GLN GLN A . n A 1 61 HIS 61 78 78 HIS HIS A . n A 1 62 SER 62 79 79 SER SER A . n A 1 63 SER 63 80 80 SER SER A . n A 1 64 TYR 64 81 81 TYR TYR A . n A 1 65 ARG 65 82 82 ARG ARG A . n A 1 66 GLN 66 83 83 GLN GLN A . n A 1 67 ARG 67 84 84 ARG ARG A . n A 1 68 ALA 68 85 85 ALA ALA A . n A 1 69 ARG 69 86 86 ARG ARG A . n A 1 70 LEU 70 87 87 LEU LEU A . n A 1 71 LEU 71 88 88 LEU LEU A . n A 1 72 LYS 72 89 89 LYS LYS A . n A 1 73 ASP 73 90 90 ASP ASP A . n A 1 74 GLN 74 91 91 GLN GLN A . n A 1 75 LEU 75 92 92 LEU LEU A . n A 1 76 SER 76 93 93 SER SER A . n A 1 77 LEU 77 94 94 LEU LEU A . n A 1 78 GLY 78 95 95 GLY GLY A . n A 1 79 ASN 79 96 96 ASN ASN A . n A 1 80 ALA 80 97 97 ALA ALA A . n A 1 81 ALA 81 98 98 ALA ALA A . n A 1 82 LEU 82 99 99 LEU LEU A . n A 1 83 GLN 83 100 100 GLN GLN A . n A 1 84 ILE 84 101 101 ILE ILE A . n A 1 85 THR 85 102 102 THR THR A . n A 1 86 ASP 86 103 103 ASP ASP A . n A 1 87 VAL 87 104 104 VAL VAL A . n A 1 88 LYS 88 105 105 LYS LYS A . n A 1 89 LEU 89 106 106 LEU LEU A . n A 1 90 GLN 90 107 107 GLN GLN A . n A 1 91 ASP 91 108 108 ASP ASP A . n A 1 92 ALA 92 109 109 ALA ALA A . n A 1 93 GLY 93 110 110 GLY GLY A . n A 1 94 VAL 94 111 111 VAL VAL A . n A 1 95 TYR 95 112 112 TYR TYR A . n A 1 96 ARG 96 113 113 ARG ARG A . n A 1 97 CYS 97 114 114 CYS CYS A . n A 1 98 MET 98 115 115 MET MET A . n A 1 99 ILE 99 116 116 ILE ILE A . n A 1 100 SER 100 117 117 SER SER A . n A 1 101 TYR 101 118 118 TYR TYR A . n A 1 102 GLY 102 119 119 GLY GLY A . n A 1 103 GLY 103 120 120 GLY GLY A . n A 1 104 ALA 104 121 121 ALA ALA A . n A 1 105 ASP 105 122 122 ASP ASP A . n A 1 106 TYR 106 123 123 TYR TYR A . n A 1 107 LYS 107 124 124 LYS LYS A . n A 1 108 ARG 108 125 125 ARG ARG A . n A 1 109 ILE 109 126 126 ILE ILE A . n A 1 110 THR 110 127 127 THR THR A . n A 1 111 VAL 111 128 128 VAL VAL A . n A 1 112 LYS 112 129 129 LYS LYS A . n A 1 113 VAL 113 130 130 VAL VAL A . n A 1 114 ASN 114 131 131 ASN ASN A . n A 1 115 ALA 115 132 132 ALA ALA A . n A 1 116 PRO 116 133 133 PRO PRO A . n A 1 117 TYR 117 134 134 TYR TYR A . n A 1 118 ALA 118 135 135 ALA ALA A . n A 1 119 ALA 119 136 136 ALA ALA A . n A 1 120 ALA 120 137 137 ALA ALA A . n A 1 121 LEU 121 138 138 LEU LEU A . n A 1 122 GLU 122 139 139 GLU GLU A . n A 1 123 HIS 123 140 ? ? ? A . n A 1 124 HIS 124 141 ? ? ? A . n B 1 1 ALA 1 18 18 ALA ALA B . n B 1 2 PHE 2 19 19 PHE PHE B . n B 1 3 THR 3 20 20 THR THR B . n B 1 4 VAL 4 21 21 VAL VAL B . n B 1 5 THR 5 22 22 THR THR B . n B 1 6 VAL 6 23 23 VAL VAL B . n B 1 7 PRO 7 24 24 PRO PRO B . n B 1 8 LYS 8 25 25 LYS LYS B . n B 1 9 ASP 9 26 26 ASP ASP B . n B 1 10 LEU 10 27 27 LEU LEU B . n B 1 11 TYR 11 28 28 TYR TYR B . n B 1 12 VAL 12 29 29 VAL VAL B . n B 1 13 VAL 13 30 30 VAL VAL B . n B 1 14 GLU 14 31 31 GLU GLU B . n B 1 15 TYR 15 32 32 TYR TYR B . n B 1 16 GLY 16 33 33 GLY GLY B . n B 1 17 SER 17 34 34 SER SER B . n B 1 18 ASN 18 35 35 ASN ASN B . n B 1 19 MET 19 36 36 MET MET B . n B 1 20 THR 20 37 37 THR THR B . n B 1 21 ILE 21 38 38 ILE ILE B . n B 1 22 GLU 22 39 39 GLU GLU B . n B 1 23 CYS 23 40 40 CYS CYS B . n B 1 24 LYS 24 41 41 LYS LYS B . n B 1 25 PHE 25 42 42 PHE PHE B . n B 1 26 PRO 26 43 43 PRO PRO B . n B 1 27 VAL 27 44 44 VAL VAL B . n B 1 28 GLU 28 45 45 GLU GLU B . n B 1 29 LYS 29 46 46 LYS LYS B . n B 1 30 GLN 30 47 47 GLN GLU B . n B 1 31 LEU 31 48 48 LEU LEU B . n B 1 32 ASP 32 49 49 ASP ASP B . n B 1 33 LEU 33 50 50 LEU LEU B . n B 1 34 ALA 34 51 51 ALA ALA B . n B 1 35 ALA 35 52 52 ALA ALA B . n B 1 36 LEU 36 53 53 LEU LEU B . n B 1 37 ILE 37 54 54 ILE ILE B . n B 1 38 VAL 38 55 55 VAL VAL B . n B 1 39 TYR 39 56 56 TYR TYR B . n B 1 40 TRP 40 57 57 TRP TRP B . n B 1 41 GLU 41 58 58 GLU GLU B . n B 1 42 MET 42 59 59 MET MET B . n B 1 43 GLU 43 60 60 GLU GLU B . n B 1 44 ASP 44 61 61 ASP ASP B . n B 1 45 LYS 45 62 62 LYS LYS B . n B 1 46 ASN 46 63 63 ASN ASN B . n B 1 47 ILE 47 64 64 ILE ILE B . n B 1 48 ILE 48 65 65 ILE ILE B . n B 1 49 GLN 49 66 66 GLN GLN B . n B 1 50 PHE 50 67 67 PHE PHE B . n B 1 51 VAL 51 68 68 VAL VAL B . n B 1 52 HIS 52 69 69 HIS HIS B . n B 1 53 GLY 53 70 70 GLY GLY B . n B 1 54 GLU 54 71 71 GLU GLU B . n B 1 55 GLU 55 72 72 GLU GLU B . n B 1 56 ASP 56 73 73 ASP ASP B . n B 1 57 LEU 57 74 74 LEU LEU B . n B 1 58 LYS 58 75 75 LYS LYS B . n B 1 59 VAL 59 76 76 VAL VAL B . n B 1 60 GLN 60 77 77 GLN GLN B . n B 1 61 HIS 61 78 78 HIS HIS B . n B 1 62 SER 62 79 79 SER SER B . n B 1 63 SER 63 80 80 SER SER B . n B 1 64 TYR 64 81 81 TYR TYR B . n B 1 65 ARG 65 82 82 ARG ARG B . n B 1 66 GLN 66 83 83 GLN GLN B . n B 1 67 ARG 67 84 84 ARG ARG B . n B 1 68 ALA 68 85 85 ALA ALA B . n B 1 69 ARG 69 86 86 ARG ARG B . n B 1 70 LEU 70 87 87 LEU LEU B . n B 1 71 LEU 71 88 88 LEU LEU B . n B 1 72 LYS 72 89 89 LYS LYS B . n B 1 73 ASP 73 90 90 ASP ASP B . n B 1 74 GLN 74 91 91 GLN GLN B . n B 1 75 LEU 75 92 92 LEU LEU B . n B 1 76 SER 76 93 93 SER SER B . n B 1 77 LEU 77 94 94 LEU LEU B . n B 1 78 GLY 78 95 95 GLY GLY B . n B 1 79 ASN 79 96 96 ASN ASN B . n B 1 80 ALA 80 97 97 ALA ALA B . n B 1 81 ALA 81 98 98 ALA ALA B . n B 1 82 LEU 82 99 99 LEU LEU B . n B 1 83 GLN 83 100 100 GLN GLN B . n B 1 84 ILE 84 101 101 ILE ILE B . n B 1 85 THR 85 102 102 THR THR B . n B 1 86 ASP 86 103 103 ASP ASP B . n B 1 87 VAL 87 104 104 VAL VAL B . n B 1 88 LYS 88 105 105 LYS LYS B . n B 1 89 LEU 89 106 106 LEU LEU B . n B 1 90 GLN 90 107 107 GLN GLN B . n B 1 91 ASP 91 108 108 ASP ASP B . n B 1 92 ALA 92 109 109 ALA ALA B . n B 1 93 GLY 93 110 110 GLY GLY B . n B 1 94 VAL 94 111 111 VAL VAL B . n B 1 95 TYR 95 112 112 TYR TYR B . n B 1 96 ARG 96 113 113 ARG ARG B . n B 1 97 CYS 97 114 114 CYS CYS B . n B 1 98 MET 98 115 115 MET MET B . n B 1 99 ILE 99 116 116 ILE ILE B . n B 1 100 SER 100 117 117 SER SER B . n B 1 101 TYR 101 118 118 TYR TYR B . n B 1 102 GLY 102 119 119 GLY GLY B . n B 1 103 GLY 103 120 120 GLY GLY B . n B 1 104 ALA 104 121 121 ALA ALA B . n B 1 105 ASP 105 122 122 ASP ASP B . n B 1 106 TYR 106 123 123 TYR TYR B . n B 1 107 LYS 107 124 124 LYS LYS B . n B 1 108 ARG 108 125 125 ARG ARG B . n B 1 109 ILE 109 126 126 ILE ILE B . n B 1 110 THR 110 127 127 THR THR B . n B 1 111 VAL 111 128 128 VAL VAL B . n B 1 112 LYS 112 129 129 LYS LYS B . n B 1 113 VAL 113 130 130 VAL VAL B . n B 1 114 ASN 114 131 131 ASN ASN B . n B 1 115 ALA 115 132 132 ALA ALA B . n B 1 116 PRO 116 133 133 PRO PRO B . n B 1 117 TYR 117 134 134 TYR TYR B . n B 1 118 ALA 118 135 135 ALA ALA B . n B 1 119 ALA 119 136 136 ALA ALA B . n B 1 120 ALA 120 137 137 ALA ALA B . n B 1 121 LEU 121 138 138 LEU LEU B . n B 1 122 GLU 122 139 139 GLU GLU B . n B 1 123 HIS 123 140 140 HIS HIS B . n B 1 124 HIS 124 141 141 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6GZ 1 201 1 6GZ 8 A . D 3 HOH 1 301 6 HOH HOH A . D 3 HOH 2 302 2 HOH HOH A . D 3 HOH 3 303 30 HOH HOH A . D 3 HOH 4 304 43 HOH HOH A . D 3 HOH 5 305 18 HOH HOH A . D 3 HOH 6 306 21 HOH HOH A . D 3 HOH 7 307 34 HOH HOH A . D 3 HOH 8 308 15 HOH HOH A . D 3 HOH 9 309 32 HOH HOH A . D 3 HOH 10 310 9 HOH HOH A . D 3 HOH 11 311 10 HOH HOH A . D 3 HOH 12 312 103 HOH HOH A . E 3 HOH 1 201 3 HOH HOH B . E 3 HOH 2 202 5 HOH HOH B . E 3 HOH 3 203 7 HOH HOH B . E 3 HOH 4 204 11 HOH HOH B . E 3 HOH 5 205 22 HOH HOH B . E 3 HOH 6 206 20 HOH HOH B . E 3 HOH 7 207 23 HOH HOH B . E 3 HOH 8 208 47 HOH HOH B . E 3 HOH 9 209 25 HOH HOH B . E 3 HOH 10 210 8 HOH HOH B . E 3 HOH 11 211 53 HOH HOH B . E 3 HOH 12 212 31 HOH HOH B . E 3 HOH 13 213 36 HOH HOH B . E 3 HOH 14 214 14 HOH HOH B . E 3 HOH 15 215 13 HOH HOH B . E 3 HOH 16 216 33 HOH HOH B . E 3 HOH 17 217 1 HOH HOH B . E 3 HOH 18 218 4 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 45 ? CB ? A GLU 28 CB 2 1 Y 1 A GLU 45 ? CG ? A GLU 28 CG 3 1 Y 1 A GLU 45 ? CD ? A GLU 28 CD 4 1 Y 1 A GLU 45 ? OE1 ? A GLU 28 OE1 5 1 Y 1 A GLU 45 ? OE2 ? A GLU 28 OE2 6 1 Y 1 A GLN 47 ? CG ? A GLN 30 CG 7 1 Y 1 A GLN 47 ? CD ? A GLN 30 CD 8 1 Y 1 A GLN 47 ? OE1 ? A GLN 30 OE1 9 1 Y 1 A GLN 47 ? NE2 ? A GLN 30 NE2 10 1 Y 1 A ARG 82 ? CG ? A ARG 65 CG 11 1 Y 1 A ARG 82 ? CD ? A ARG 65 CD 12 1 Y 1 A ARG 82 ? NE ? A ARG 65 NE 13 1 Y 1 A ARG 82 ? CZ ? A ARG 65 CZ 14 1 Y 1 A ARG 82 ? NH1 ? A ARG 65 NH1 15 1 Y 1 A ARG 82 ? NH2 ? A ARG 65 NH2 16 1 Y 1 A LYS 129 ? CG ? A LYS 112 CG 17 1 Y 1 A LYS 129 ? CD ? A LYS 112 CD 18 1 Y 1 A LYS 129 ? CE ? A LYS 112 CE 19 1 Y 1 A LYS 129 ? NZ ? A LYS 112 NZ 20 1 Y 1 B LYS 46 ? CB ? B LYS 29 CB 21 1 Y 1 B LYS 46 ? CG ? B LYS 29 CG 22 1 Y 1 B LYS 46 ? CD ? B LYS 29 CD 23 1 Y 1 B LYS 46 ? CE ? B LYS 29 CE 24 1 Y 1 B LYS 46 ? NZ ? B LYS 29 NZ 25 1 Y 1 B GLN 47 ? CG ? B GLN 30 CG 26 1 Y 1 B GLN 47 ? CD ? B GLN 30 CD 27 1 Y 1 B GLN 47 ? OE1 ? B GLN 30 OE1 28 1 Y 1 B GLN 47 ? NE2 ? B GLN 30 NE2 29 1 Y 1 B GLU 71 ? CG ? B GLU 54 CG 30 1 Y 1 B GLU 71 ? CD ? B GLU 54 CD 31 1 Y 1 B GLU 71 ? OE1 ? B GLU 54 OE1 32 1 Y 1 B GLU 71 ? OE2 ? B GLU 54 OE2 33 1 Y 1 B LYS 75 ? CG ? B LYS 58 CG 34 1 Y 1 B LYS 75 ? CD ? B LYS 58 CD 35 1 Y 1 B LYS 75 ? CE ? B LYS 58 CE 36 1 Y 1 B LYS 75 ? NZ ? B LYS 58 NZ 37 1 Y 1 B ARG 82 ? CG ? B ARG 65 CG 38 1 Y 1 B ARG 82 ? CD ? B ARG 65 CD 39 1 Y 1 B ARG 82 ? NE ? B ARG 65 NE 40 1 Y 1 B ARG 82 ? CZ ? B ARG 65 CZ 41 1 Y 1 B ARG 82 ? NH1 ? B ARG 65 NH1 42 1 Y 1 B ARG 82 ? NH2 ? B ARG 65 NH2 43 1 Y 1 B ARG 86 ? CG ? B ARG 69 CG 44 1 Y 1 B ARG 86 ? CD ? B ARG 69 CD 45 1 Y 1 B ARG 86 ? NE ? B ARG 69 NE 46 1 Y 1 B ARG 86 ? CZ ? B ARG 69 CZ 47 1 Y 1 B ARG 86 ? NH1 ? B ARG 69 NH1 48 1 Y 1 B ARG 86 ? NH2 ? B ARG 69 NH2 49 1 Y 1 B LEU 88 ? CG ? B LEU 71 CG 50 1 Y 1 B LEU 88 ? CD1 ? B LEU 71 CD1 51 1 Y 1 B LEU 88 ? CD2 ? B LEU 71 CD2 52 1 Y 1 B LYS 89 ? CG ? B LYS 72 CG 53 1 Y 1 B LYS 89 ? CD ? B LYS 72 CD 54 1 Y 1 B LYS 89 ? CE ? B LYS 72 CE 55 1 Y 1 B LYS 89 ? NZ ? B LYS 72 NZ 56 1 Y 1 B ASP 90 ? CG ? B ASP 73 CG 57 1 Y 1 B ASP 90 ? OD1 ? B ASP 73 OD1 58 1 Y 1 B ASP 90 ? OD2 ? B ASP 73 OD2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.6 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5J8O _cell.details ? _cell.formula_units_Z ? _cell.length_a 34.313 _cell.length_a_esd ? _cell.length_b 55.182 _cell.length_b_esd ? _cell.length_c 141.773 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5J8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5J8O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M ammonium formate and 20% (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-21 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918409 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.918409 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5J8O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 47.26 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12626 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.8 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.465 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 2.2300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 2.3000 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -4.5300 _refine.B_iso_max 88.700 _refine.B_iso_mean 44.1120 _refine.B_iso_min 26.300 _refine.correlation_coeff_Fo_to_Fc 0.9270 _refine.correlation_coeff_Fo_to_Fc_free 0.8770 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5J8O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 47.26 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11974 _refine.ls_number_reflns_R_free 610 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8400 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2445 _refine.ls_R_factor_R_free 0.3052 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2412 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5c3t _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.3910 _refine.pdbx_overall_ESU_R_Free 0.2890 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.2530 _refine.overall_SU_ML 0.2500 _refine.overall_SU_R_Cruickshank_DPI 0.3909 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 47.26 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1968 _refine_hist.pdbx_number_residues_total 246 _refine_hist.pdbx_B_iso_mean_ligand 42.77 _refine_hist.pdbx_B_iso_mean_solvent 46.53 _refine_hist.pdbx_number_atoms_protein 1906 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.019 1979 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1870 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.878 1.975 2689 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.089 3.000 4280 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 8.030 5.000 244 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.254 24.884 86 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.240 15.000 322 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 29.198 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.214 0.200 305 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 2240 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 447 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 3.302 4.369 982 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.301 4.368 983 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.759 6.541 1224 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.3600 _refine_ls_shell.number_reflns_all 878 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_R_work 846 _refine_ls_shell.percent_reflns_obs 99.8900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4230 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2670 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5J8O _struct.title 'Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5J8O _struct_keywords.text 'PD-L1, Programmed cell death 1 ligand 1, cell cycle, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PD1L1_HUMAN _struct_ref.pdbx_db_accession Q9NZQ7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNA ALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPY ; _struct_ref.pdbx_align_begin 18 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5J8O A 1 ? 117 ? Q9NZQ7 18 ? 134 ? 18 134 2 1 5J8O B 1 ? 117 ? Q9NZQ7 18 ? 134 ? 18 134 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5J8O ALA A 118 ? UNP Q9NZQ7 ? ? 'expression tag' 135 1 1 5J8O ALA A 119 ? UNP Q9NZQ7 ? ? 'expression tag' 136 2 1 5J8O ALA A 120 ? UNP Q9NZQ7 ? ? 'expression tag' 137 3 1 5J8O LEU A 121 ? UNP Q9NZQ7 ? ? 'expression tag' 138 4 1 5J8O GLU A 122 ? UNP Q9NZQ7 ? ? 'expression tag' 139 5 1 5J8O HIS A 123 ? UNP Q9NZQ7 ? ? 'expression tag' 140 6 1 5J8O HIS A 124 ? UNP Q9NZQ7 ? ? 'expression tag' 141 7 2 5J8O ALA B 118 ? UNP Q9NZQ7 ? ? 'expression tag' 135 8 2 5J8O ALA B 119 ? UNP Q9NZQ7 ? ? 'expression tag' 136 9 2 5J8O ALA B 120 ? UNP Q9NZQ7 ? ? 'expression tag' 137 10 2 5J8O LEU B 121 ? UNP Q9NZQ7 ? ? 'expression tag' 138 11 2 5J8O GLU B 122 ? UNP Q9NZQ7 ? ? 'expression tag' 139 12 2 5J8O HIS B 123 ? UNP Q9NZQ7 ? ? 'expression tag' 140 13 2 5J8O HIS B 124 ? UNP Q9NZQ7 ? ? 'expression tag' 141 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1270 ? 1 MORE -2 ? 1 'SSA (A^2)' 12610 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 32 ? ALA A 35 ? ASP A 49 ALA A 52 5 ? 4 HELX_P HELX_P2 AA2 LEU A 57 ? GLN A 60 ? LEU A 74 GLN A 77 5 ? 4 HELX_P HELX_P3 AA3 HIS A 61 ? ARG A 65 ? HIS A 78 ARG A 82 5 ? 5 HELX_P HELX_P4 AA4 LEU A 71 ? SER A 76 ? LEU A 88 SER A 93 1 ? 6 HELX_P HELX_P5 AA5 LYS A 88 ? ALA A 92 ? LYS A 105 ALA A 109 5 ? 5 HELX_P HELX_P6 AA6 ASP B 32 ? LEU B 36 ? ASP B 49 LEU B 53 5 ? 5 HELX_P HELX_P7 AA7 HIS B 61 ? ARG B 65 ? HIS B 78 ARG B 82 5 ? 5 HELX_P HELX_P8 AA8 LYS B 72 ? GLY B 78 ? LYS B 89 GLY B 95 5 ? 7 HELX_P HELX_P9 AA9 LYS B 88 ? ALA B 92 ? LYS B 105 ALA B 109 5 ? 5 HELX_P HELX_P10 AB1 PRO B 116 ? LEU B 121 ? PRO B 133 LEU B 138 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 40 A CYS 114 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf2 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 40 B CYS 114 1_555 ? ? ? ? ? ? ? 2.067 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 43 A . ? GLU 60 A ASP 44 A ? ASP 61 A 1 -25.16 2 HIS 123 B . ? HIS 140 B HIS 124 B ? HIS 141 B 1 13.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 3 ? AA3 ? 6 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 10 ? GLU A 14 ? LEU A 27 GLU A 31 AA1 2 ALA A 104 ? ASN A 114 ? ALA A 121 ASN A 131 AA1 3 GLY A 93 ? SER A 100 ? GLY A 110 SER A 117 AA1 4 ILE A 37 ? GLU A 41 ? ILE A 54 GLU A 58 AA1 5 ASN A 46 ? VAL A 51 ? ASN A 63 VAL A 68 AA1 6 GLU A 54 ? GLU A 55 ? GLU A 71 GLU A 72 AA2 1 MET A 19 ? LYS A 24 ? MET A 36 LYS A 41 AA2 2 ASN A 79 ? ILE A 84 ? ASN A 96 ILE A 101 AA2 3 ALA A 68 ? LEU A 70 ? ALA A 85 LEU A 87 AA3 1 LEU B 10 ? GLU B 14 ? LEU B 27 GLU B 31 AA3 2 ALA B 104 ? ASN B 114 ? ALA B 121 ASN B 131 AA3 3 GLY B 93 ? SER B 100 ? GLY B 110 SER B 117 AA3 4 ILE B 37 ? MET B 42 ? ILE B 54 MET B 59 AA3 5 LYS B 45 ? VAL B 51 ? LYS B 62 VAL B 68 AA3 6 GLU B 54 ? ASP B 56 ? GLU B 71 ASP B 73 AA4 1 MET B 19 ? ILE B 21 ? MET B 36 ILE B 38 AA4 2 LEU B 82 ? ILE B 84 ? LEU B 99 ILE B 101 AA4 3 ALA B 68 ? LEU B 70 ? ALA B 85 LEU B 87 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 11 ? N TYR A 28 O LYS A 112 ? O LYS A 129 AA1 2 3 O ILE A 109 ? O ILE A 126 N TYR A 95 ? N TYR A 112 AA1 3 4 O MET A 98 ? O MET A 115 N TYR A 39 ? N TYR A 56 AA1 4 5 N VAL A 38 ? N VAL A 55 O PHE A 50 ? O PHE A 67 AA1 5 6 N VAL A 51 ? N VAL A 68 O GLU A 54 ? O GLU A 71 AA2 1 2 N MET A 19 ? N MET A 36 O ILE A 84 ? O ILE A 101 AA2 2 3 O GLN A 83 ? O GLN A 100 N ARG A 69 ? N ARG A 86 AA3 1 2 N VAL B 13 ? N VAL B 30 O ASN B 114 ? O ASN B 131 AA3 2 3 O ASP B 105 ? O ASP B 122 N ILE B 99 ? N ILE B 116 AA3 3 4 O ARG B 96 ? O ARG B 113 N GLU B 41 ? N GLU B 58 AA3 4 5 N TRP B 40 ? N TRP B 57 O ILE B 47 ? O ILE B 64 AA3 5 6 N GLN B 49 ? N GLN B 66 O ASP B 56 ? O ASP B 73 AA4 1 2 N MET B 19 ? N MET B 36 O ILE B 84 ? O ILE B 101 AA4 2 3 O GLN B 83 ? O GLN B 100 N ARG B 69 ? N ARG B 86 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 6GZ _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'binding site for residue 6GZ A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TYR A 39 ? TYR A 56 . ? 1_555 ? 2 AC1 8 GLN A 49 ? GLN A 66 . ? 1_555 ? 3 AC1 8 VAL A 59 ? VAL A 76 . ? 1_555 ? 4 AC1 8 MET A 98 ? MET A 115 . ? 1_555 ? 5 AC1 8 TYR B 39 ? TYR B 56 . ? 1_555 ? 6 AC1 8 MET B 98 ? MET B 115 . ? 1_555 ? 7 AC1 8 ALA B 104 ? ALA B 121 . ? 1_555 ? 8 AC1 8 ASP B 105 ? ASP B 122 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 302 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 216 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_565 _pdbx_validate_symm_contact.dist 1.96 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 84 ? ? CZ B ARG 84 ? ? NH1 B ARG 84 ? ? 117.07 120.30 -3.23 0.50 N 2 1 NE B ARG 84 ? ? CZ B ARG 84 ? ? NH2 B ARG 84 ? ? 123.95 120.30 3.65 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 47 ? ? -33.75 127.99 2 1 MET A 59 ? ? -106.51 -61.37 3 1 GLU A 60 ? ? -74.41 -80.82 4 1 ASP A 61 ? ? 79.57 -55.27 5 1 TYR A 118 ? ? -160.94 87.58 6 1 LEU A 138 ? ? -173.86 127.09 7 1 GLU B 45 ? ? -74.72 -126.35 8 1 HIS B 69 ? ? 59.67 -126.95 9 1 ASP B 90 ? ? -28.45 -54.59 10 1 TYR B 118 ? ? -160.46 89.74 11 1 LEU B 138 ? ? -71.23 26.37 12 1 GLU B 139 ? ? -27.39 -40.08 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 139 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 140 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -45.54 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id GLU _pdbx_validate_chiral.auth_seq_id 60 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_phasing_MR.entry_id 5J8O _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.180 _pdbx_phasing_MR.d_res_low_rotation 43.540 _pdbx_phasing_MR.d_res_high_translation 2.180 _pdbx_phasing_MR.d_res_low_translation 43.540 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 140 ? A HIS 123 2 1 Y 1 A HIS 141 ? A HIS 124 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6GZ BR BR N N 1 6GZ C16 C Y N 2 6GZ C15 C Y N 3 6GZ C7 C Y N 4 6GZ C8 C N N 5 6GZ N N N N 6 6GZ C13 C N R 7 6GZ C14 C N N 8 6GZ O2 O N N 9 6GZ O1 O N N 10 6GZ C12 C N N 11 6GZ C11 C N N 12 6GZ C10 C N N 13 6GZ C9 C N N 14 6GZ C6 C Y N 15 6GZ C5 C Y N 16 6GZ C4 C Y N 17 6GZ O O N N 18 6GZ C3 C N N 19 6GZ C2 C Y N 20 6GZ C17 C Y N 21 6GZ C18 C Y N 22 6GZ C19 C Y N 23 6GZ C20 C Y N 24 6GZ C1 C Y N 25 6GZ C C N N 26 6GZ C21 C Y N 27 6GZ C26 C Y N 28 6GZ C25 C Y N 29 6GZ C24 C Y N 30 6GZ C23 C Y N 31 6GZ C22 C Y N 32 6GZ H1 H N N 33 6GZ H2 H N N 34 6GZ H3 H N N 35 6GZ H5 H N N 36 6GZ H6 H N N 37 6GZ H7 H N N 38 6GZ H8 H N N 39 6GZ H9 H N N 40 6GZ H10 H N N 41 6GZ H11 H N N 42 6GZ H12 H N N 43 6GZ H13 H N N 44 6GZ H14 H N N 45 6GZ H15 H N N 46 6GZ H16 H N N 47 6GZ H17 H N N 48 6GZ H18 H N N 49 6GZ H19 H N N 50 6GZ H20 H N N 51 6GZ H21 H N N 52 6GZ H22 H N N 53 6GZ H23 H N N 54 6GZ H24 H N N 55 6GZ H25 H N N 56 6GZ H26 H N N 57 6GZ H27 H N N 58 6GZ H28 H N N 59 6GZ H29 H N N 60 ALA N N N N 61 ALA CA C N S 62 ALA C C N N 63 ALA O O N N 64 ALA CB C N N 65 ALA OXT O N N 66 ALA H H N N 67 ALA H2 H N N 68 ALA HA H N N 69 ALA HB1 H N N 70 ALA HB2 H N N 71 ALA HB3 H N N 72 ALA HXT H N N 73 ARG N N N N 74 ARG CA C N S 75 ARG C C N N 76 ARG O O N N 77 ARG CB C N N 78 ARG CG C N N 79 ARG CD C N N 80 ARG NE N N N 81 ARG CZ C N N 82 ARG NH1 N N N 83 ARG NH2 N N N 84 ARG OXT O N N 85 ARG H H N N 86 ARG H2 H N N 87 ARG HA H N N 88 ARG HB2 H N N 89 ARG HB3 H N N 90 ARG HG2 H N N 91 ARG HG3 H N N 92 ARG HD2 H N N 93 ARG HD3 H N N 94 ARG HE H N N 95 ARG HH11 H N N 96 ARG HH12 H N N 97 ARG HH21 H N N 98 ARG HH22 H N N 99 ARG HXT H N N 100 ASN N N N N 101 ASN CA C N S 102 ASN C C N N 103 ASN O O N N 104 ASN CB C N N 105 ASN CG C N N 106 ASN OD1 O N N 107 ASN ND2 N N N 108 ASN OXT O N N 109 ASN H H N N 110 ASN H2 H N N 111 ASN HA H N N 112 ASN HB2 H N N 113 ASN HB3 H N N 114 ASN HD21 H N N 115 ASN HD22 H N N 116 ASN HXT H N N 117 ASP N N N N 118 ASP CA C N S 119 ASP C C N N 120 ASP O O N N 121 ASP CB C N N 122 ASP CG C N N 123 ASP OD1 O N N 124 ASP OD2 O N N 125 ASP OXT O N N 126 ASP H H N N 127 ASP H2 H N N 128 ASP HA H N N 129 ASP HB2 H N N 130 ASP HB3 H N N 131 ASP HD2 H N N 132 ASP HXT H N N 133 CYS N N N N 134 CYS CA C N R 135 CYS C C N N 136 CYS O O N N 137 CYS CB C N N 138 CYS SG S N N 139 CYS OXT O N N 140 CYS H H N N 141 CYS H2 H N N 142 CYS HA H N N 143 CYS HB2 H N N 144 CYS HB3 H N N 145 CYS HG H N N 146 CYS HXT H N N 147 GLN N N N N 148 GLN CA C N S 149 GLN C C N N 150 GLN O O N N 151 GLN CB C N N 152 GLN CG C N N 153 GLN CD C N N 154 GLN OE1 O N N 155 GLN NE2 N N N 156 GLN OXT O N N 157 GLN H H N N 158 GLN H2 H N N 159 GLN HA H N N 160 GLN HB2 H N N 161 GLN HB3 H N N 162 GLN HG2 H N N 163 GLN HG3 H N N 164 GLN HE21 H N N 165 GLN HE22 H N N 166 GLN HXT H N N 167 GLU N N N N 168 GLU CA C N S 169 GLU C C N N 170 GLU O O N N 171 GLU CB C N N 172 GLU CG C N N 173 GLU CD C N N 174 GLU OE1 O N N 175 GLU OE2 O N N 176 GLU OXT O N N 177 GLU H H N N 178 GLU H2 H N N 179 GLU HA H N N 180 GLU HB2 H N N 181 GLU HB3 H N N 182 GLU HG2 H N N 183 GLU HG3 H N N 184 GLU HE2 H N N 185 GLU HXT H N N 186 GLY N N N N 187 GLY CA C N N 188 GLY C C N N 189 GLY O O N N 190 GLY OXT O N N 191 GLY H H N N 192 GLY H2 H N N 193 GLY HA2 H N N 194 GLY HA3 H N N 195 GLY HXT H N N 196 HIS N N N N 197 HIS CA C N S 198 HIS C C N N 199 HIS O O N N 200 HIS CB C N N 201 HIS CG C Y N 202 HIS ND1 N Y N 203 HIS CD2 C Y N 204 HIS CE1 C Y N 205 HIS NE2 N Y N 206 HIS OXT O N N 207 HIS H H N N 208 HIS H2 H N N 209 HIS HA H N N 210 HIS HB2 H N N 211 HIS HB3 H N N 212 HIS HD1 H N N 213 HIS HD2 H N N 214 HIS HE1 H N N 215 HIS HE2 H N N 216 HIS HXT H N N 217 HOH O O N N 218 HOH H1 H N N 219 HOH H2 H N N 220 ILE N N N N 221 ILE CA C N S 222 ILE C C N N 223 ILE O O N N 224 ILE CB C N S 225 ILE CG1 C N N 226 ILE CG2 C N N 227 ILE CD1 C N N 228 ILE OXT O N N 229 ILE H H N N 230 ILE H2 H N N 231 ILE HA H N N 232 ILE HB H N N 233 ILE HG12 H N N 234 ILE HG13 H N N 235 ILE HG21 H N N 236 ILE HG22 H N N 237 ILE HG23 H N N 238 ILE HD11 H N N 239 ILE HD12 H N N 240 ILE HD13 H N N 241 ILE HXT H N N 242 LEU N N N N 243 LEU CA C N S 244 LEU C C N N 245 LEU O O N N 246 LEU CB C N N 247 LEU CG C N N 248 LEU CD1 C N N 249 LEU CD2 C N N 250 LEU OXT O N N 251 LEU H H N N 252 LEU H2 H N N 253 LEU HA H N N 254 LEU HB2 H N N 255 LEU HB3 H N N 256 LEU HG H N N 257 LEU HD11 H N N 258 LEU HD12 H N N 259 LEU HD13 H N N 260 LEU HD21 H N N 261 LEU HD22 H N N 262 LEU HD23 H N N 263 LEU HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MET N N N N 290 MET CA C N S 291 MET C C N N 292 MET O O N N 293 MET CB C N N 294 MET CG C N N 295 MET SD S N N 296 MET CE C N N 297 MET OXT O N N 298 MET H H N N 299 MET H2 H N N 300 MET HA H N N 301 MET HB2 H N N 302 MET HB3 H N N 303 MET HG2 H N N 304 MET HG3 H N N 305 MET HE1 H N N 306 MET HE2 H N N 307 MET HE3 H N N 308 MET HXT H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 SER N N N N 350 SER CA C N S 351 SER C C N N 352 SER O O N N 353 SER CB C N N 354 SER OG O N N 355 SER OXT O N N 356 SER H H N N 357 SER H2 H N N 358 SER HA H N N 359 SER HB2 H N N 360 SER HB3 H N N 361 SER HG H N N 362 SER HXT H N N 363 THR N N N N 364 THR CA C N S 365 THR C C N N 366 THR O O N N 367 THR CB C N R 368 THR OG1 O N N 369 THR CG2 C N N 370 THR OXT O N N 371 THR H H N N 372 THR H2 H N N 373 THR HA H N N 374 THR HB H N N 375 THR HG1 H N N 376 THR HG21 H N N 377 THR HG22 H N N 378 THR HG23 H N N 379 THR HXT H N N 380 TRP N N N N 381 TRP CA C N S 382 TRP C C N N 383 TRP O O N N 384 TRP CB C N N 385 TRP CG C Y N 386 TRP CD1 C Y N 387 TRP CD2 C Y N 388 TRP NE1 N Y N 389 TRP CE2 C Y N 390 TRP CE3 C Y N 391 TRP CZ2 C Y N 392 TRP CZ3 C Y N 393 TRP CH2 C Y N 394 TRP OXT O N N 395 TRP H H N N 396 TRP H2 H N N 397 TRP HA H N N 398 TRP HB2 H N N 399 TRP HB3 H N N 400 TRP HD1 H N N 401 TRP HE1 H N N 402 TRP HE3 H N N 403 TRP HZ2 H N N 404 TRP HZ3 H N N 405 TRP HH2 H N N 406 TRP HXT H N N 407 TYR N N N N 408 TYR CA C N S 409 TYR C C N N 410 TYR O O N N 411 TYR CB C N N 412 TYR CG C Y N 413 TYR CD1 C Y N 414 TYR CD2 C Y N 415 TYR CE1 C Y N 416 TYR CE2 C Y N 417 TYR CZ C Y N 418 TYR OH O N N 419 TYR OXT O N N 420 TYR H H N N 421 TYR H2 H N N 422 TYR HA H N N 423 TYR HB2 H N N 424 TYR HB3 H N N 425 TYR HD1 H N N 426 TYR HD2 H N N 427 TYR HE1 H N N 428 TYR HE2 H N N 429 TYR HH H N N 430 TYR HXT H N N 431 VAL N N N N 432 VAL CA C N S 433 VAL C C N N 434 VAL O O N N 435 VAL CB C N N 436 VAL CG1 C N N 437 VAL CG2 C N N 438 VAL OXT O N N 439 VAL H H N N 440 VAL H2 H N N 441 VAL HA H N N 442 VAL HB H N N 443 VAL HG11 H N N 444 VAL HG12 H N N 445 VAL HG13 H N N 446 VAL HG21 H N N 447 VAL HG22 H N N 448 VAL HG23 H N N 449 VAL HXT H N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6GZ C11 C10 sing N N 1 6GZ C11 C12 sing N N 2 6GZ C10 C9 sing N N 3 6GZ O2 C14 doub N N 4 6GZ C9 N sing N N 5 6GZ C12 C13 sing N N 6 6GZ C14 C13 sing N N 7 6GZ C14 O1 sing N N 8 6GZ N C8 sing N N 9 6GZ N C13 sing N N 10 6GZ C6 C5 doub Y N 11 6GZ C6 C7 sing Y N 12 6GZ C8 C7 sing N N 13 6GZ C5 C4 sing Y N 14 6GZ C7 C15 doub Y N 15 6GZ C C1 sing N N 16 6GZ C4 O sing N N 17 6GZ C4 C16 doub Y N 18 6GZ C15 C16 sing Y N 19 6GZ C3 O sing N N 20 6GZ C3 C2 sing N N 21 6GZ C24 C25 doub Y N 22 6GZ C24 C23 sing Y N 23 6GZ C25 C26 sing Y N 24 6GZ C1 C2 doub Y N 25 6GZ C1 C20 sing Y N 26 6GZ C23 C22 doub Y N 27 6GZ C16 BR sing N N 28 6GZ C26 C21 doub Y N 29 6GZ C22 C21 sing Y N 30 6GZ C2 C17 sing Y N 31 6GZ C21 C20 sing N N 32 6GZ C20 C19 doub Y N 33 6GZ C17 C18 doub Y N 34 6GZ C19 C18 sing Y N 35 6GZ C15 H1 sing N N 36 6GZ C8 H2 sing N N 37 6GZ C8 H3 sing N N 38 6GZ C13 H5 sing N N 39 6GZ O1 H6 sing N N 40 6GZ C12 H7 sing N N 41 6GZ C12 H8 sing N N 42 6GZ C11 H9 sing N N 43 6GZ C11 H10 sing N N 44 6GZ C10 H11 sing N N 45 6GZ C10 H12 sing N N 46 6GZ C9 H13 sing N N 47 6GZ C9 H14 sing N N 48 6GZ C6 H15 sing N N 49 6GZ C5 H16 sing N N 50 6GZ C3 H17 sing N N 51 6GZ C3 H18 sing N N 52 6GZ C17 H19 sing N N 53 6GZ C18 H20 sing N N 54 6GZ C19 H21 sing N N 55 6GZ C H22 sing N N 56 6GZ C H23 sing N N 57 6GZ C H24 sing N N 58 6GZ C26 H25 sing N N 59 6GZ C25 H26 sing N N 60 6GZ C24 H27 sing N N 61 6GZ C23 H28 sing N N 62 6GZ C22 H29 sing N N 63 ALA N CA sing N N 64 ALA N H sing N N 65 ALA N H2 sing N N 66 ALA CA C sing N N 67 ALA CA CB sing N N 68 ALA CA HA sing N N 69 ALA C O doub N N 70 ALA C OXT sing N N 71 ALA CB HB1 sing N N 72 ALA CB HB2 sing N N 73 ALA CB HB3 sing N N 74 ALA OXT HXT sing N N 75 ARG N CA sing N N 76 ARG N H sing N N 77 ARG N H2 sing N N 78 ARG CA C sing N N 79 ARG CA CB sing N N 80 ARG CA HA sing N N 81 ARG C O doub N N 82 ARG C OXT sing N N 83 ARG CB CG sing N N 84 ARG CB HB2 sing N N 85 ARG CB HB3 sing N N 86 ARG CG CD sing N N 87 ARG CG HG2 sing N N 88 ARG CG HG3 sing N N 89 ARG CD NE sing N N 90 ARG CD HD2 sing N N 91 ARG CD HD3 sing N N 92 ARG NE CZ sing N N 93 ARG NE HE sing N N 94 ARG CZ NH1 sing N N 95 ARG CZ NH2 doub N N 96 ARG NH1 HH11 sing N N 97 ARG NH1 HH12 sing N N 98 ARG NH2 HH21 sing N N 99 ARG NH2 HH22 sing N N 100 ARG OXT HXT sing N N 101 ASN N CA sing N N 102 ASN N H sing N N 103 ASN N H2 sing N N 104 ASN CA C sing N N 105 ASN CA CB sing N N 106 ASN CA HA sing N N 107 ASN C O doub N N 108 ASN C OXT sing N N 109 ASN CB CG sing N N 110 ASN CB HB2 sing N N 111 ASN CB HB3 sing N N 112 ASN CG OD1 doub N N 113 ASN CG ND2 sing N N 114 ASN ND2 HD21 sing N N 115 ASN ND2 HD22 sing N N 116 ASN OXT HXT sing N N 117 ASP N CA sing N N 118 ASP N H sing N N 119 ASP N H2 sing N N 120 ASP CA C sing N N 121 ASP CA CB sing N N 122 ASP CA HA sing N N 123 ASP C O doub N N 124 ASP C OXT sing N N 125 ASP CB CG sing N N 126 ASP CB HB2 sing N N 127 ASP CB HB3 sing N N 128 ASP CG OD1 doub N N 129 ASP CG OD2 sing N N 130 ASP OD2 HD2 sing N N 131 ASP OXT HXT sing N N 132 CYS N CA sing N N 133 CYS N H sing N N 134 CYS N H2 sing N N 135 CYS CA C sing N N 136 CYS CA CB sing N N 137 CYS CA HA sing N N 138 CYS C O doub N N 139 CYS C OXT sing N N 140 CYS CB SG sing N N 141 CYS CB HB2 sing N N 142 CYS CB HB3 sing N N 143 CYS SG HG sing N N 144 CYS OXT HXT sing N N 145 GLN N CA sing N N 146 GLN N H sing N N 147 GLN N H2 sing N N 148 GLN CA C sing N N 149 GLN CA CB sing N N 150 GLN CA HA sing N N 151 GLN C O doub N N 152 GLN C OXT sing N N 153 GLN CB CG sing N N 154 GLN CB HB2 sing N N 155 GLN CB HB3 sing N N 156 GLN CG CD sing N N 157 GLN CG HG2 sing N N 158 GLN CG HG3 sing N N 159 GLN CD OE1 doub N N 160 GLN CD NE2 sing N N 161 GLN NE2 HE21 sing N N 162 GLN NE2 HE22 sing N N 163 GLN OXT HXT sing N N 164 GLU N CA sing N N 165 GLU N H sing N N 166 GLU N H2 sing N N 167 GLU CA C sing N N 168 GLU CA CB sing N N 169 GLU CA HA sing N N 170 GLU C O doub N N 171 GLU C OXT sing N N 172 GLU CB CG sing N N 173 GLU CB HB2 sing N N 174 GLU CB HB3 sing N N 175 GLU CG CD sing N N 176 GLU CG HG2 sing N N 177 GLU CG HG3 sing N N 178 GLU CD OE1 doub N N 179 GLU CD OE2 sing N N 180 GLU OE2 HE2 sing N N 181 GLU OXT HXT sing N N 182 GLY N CA sing N N 183 GLY N H sing N N 184 GLY N H2 sing N N 185 GLY CA C sing N N 186 GLY CA HA2 sing N N 187 GLY CA HA3 sing N N 188 GLY C O doub N N 189 GLY C OXT sing N N 190 GLY OXT HXT sing N N 191 HIS N CA sing N N 192 HIS N H sing N N 193 HIS N H2 sing N N 194 HIS CA C sing N N 195 HIS CA CB sing N N 196 HIS CA HA sing N N 197 HIS C O doub N N 198 HIS C OXT sing N N 199 HIS CB CG sing N N 200 HIS CB HB2 sing N N 201 HIS CB HB3 sing N N 202 HIS CG ND1 sing Y N 203 HIS CG CD2 doub Y N 204 HIS ND1 CE1 doub Y N 205 HIS ND1 HD1 sing N N 206 HIS CD2 NE2 sing Y N 207 HIS CD2 HD2 sing N N 208 HIS CE1 NE2 sing Y N 209 HIS CE1 HE1 sing N N 210 HIS NE2 HE2 sing N N 211 HIS OXT HXT sing N N 212 HOH O H1 sing N N 213 HOH O H2 sing N N 214 ILE N CA sing N N 215 ILE N H sing N N 216 ILE N H2 sing N N 217 ILE CA C sing N N 218 ILE CA CB sing N N 219 ILE CA HA sing N N 220 ILE C O doub N N 221 ILE C OXT sing N N 222 ILE CB CG1 sing N N 223 ILE CB CG2 sing N N 224 ILE CB HB sing N N 225 ILE CG1 CD1 sing N N 226 ILE CG1 HG12 sing N N 227 ILE CG1 HG13 sing N N 228 ILE CG2 HG21 sing N N 229 ILE CG2 HG22 sing N N 230 ILE CG2 HG23 sing N N 231 ILE CD1 HD11 sing N N 232 ILE CD1 HD12 sing N N 233 ILE CD1 HD13 sing N N 234 ILE OXT HXT sing N N 235 LEU N CA sing N N 236 LEU N H sing N N 237 LEU N H2 sing N N 238 LEU CA C sing N N 239 LEU CA CB sing N N 240 LEU CA HA sing N N 241 LEU C O doub N N 242 LEU C OXT sing N N 243 LEU CB CG sing N N 244 LEU CB HB2 sing N N 245 LEU CB HB3 sing N N 246 LEU CG CD1 sing N N 247 LEU CG CD2 sing N N 248 LEU CG HG sing N N 249 LEU CD1 HD11 sing N N 250 LEU CD1 HD12 sing N N 251 LEU CD1 HD13 sing N N 252 LEU CD2 HD21 sing N N 253 LEU CD2 HD22 sing N N 254 LEU CD2 HD23 sing N N 255 LEU OXT HXT sing N N 256 LYS N CA sing N N 257 LYS N H sing N N 258 LYS N H2 sing N N 259 LYS CA C sing N N 260 LYS CA CB sing N N 261 LYS CA HA sing N N 262 LYS C O doub N N 263 LYS C OXT sing N N 264 LYS CB CG sing N N 265 LYS CB HB2 sing N N 266 LYS CB HB3 sing N N 267 LYS CG CD sing N N 268 LYS CG HG2 sing N N 269 LYS CG HG3 sing N N 270 LYS CD CE sing N N 271 LYS CD HD2 sing N N 272 LYS CD HD3 sing N N 273 LYS CE NZ sing N N 274 LYS CE HE2 sing N N 275 LYS CE HE3 sing N N 276 LYS NZ HZ1 sing N N 277 LYS NZ HZ2 sing N N 278 LYS NZ HZ3 sing N N 279 LYS OXT HXT sing N N 280 MET N CA sing N N 281 MET N H sing N N 282 MET N H2 sing N N 283 MET CA C sing N N 284 MET CA CB sing N N 285 MET CA HA sing N N 286 MET C O doub N N 287 MET C OXT sing N N 288 MET CB CG sing N N 289 MET CB HB2 sing N N 290 MET CB HB3 sing N N 291 MET CG SD sing N N 292 MET CG HG2 sing N N 293 MET CG HG3 sing N N 294 MET SD CE sing N N 295 MET CE HE1 sing N N 296 MET CE HE2 sing N N 297 MET CE HE3 sing N N 298 MET OXT HXT sing N N 299 PHE N CA sing N N 300 PHE N H sing N N 301 PHE N H2 sing N N 302 PHE CA C sing N N 303 PHE CA CB sing N N 304 PHE CA HA sing N N 305 PHE C O doub N N 306 PHE C OXT sing N N 307 PHE CB CG sing N N 308 PHE CB HB2 sing N N 309 PHE CB HB3 sing N N 310 PHE CG CD1 doub Y N 311 PHE CG CD2 sing Y N 312 PHE CD1 CE1 sing Y N 313 PHE CD1 HD1 sing N N 314 PHE CD2 CE2 doub Y N 315 PHE CD2 HD2 sing N N 316 PHE CE1 CZ doub Y N 317 PHE CE1 HE1 sing N N 318 PHE CE2 CZ sing Y N 319 PHE CE2 HE2 sing N N 320 PHE CZ HZ sing N N 321 PHE OXT HXT sing N N 322 PRO N CA sing N N 323 PRO N CD sing N N 324 PRO N H sing N N 325 PRO CA C sing N N 326 PRO CA CB sing N N 327 PRO CA HA sing N N 328 PRO C O doub N N 329 PRO C OXT sing N N 330 PRO CB CG sing N N 331 PRO CB HB2 sing N N 332 PRO CB HB3 sing N N 333 PRO CG CD sing N N 334 PRO CG HG2 sing N N 335 PRO CG HG3 sing N N 336 PRO CD HD2 sing N N 337 PRO CD HD3 sing N N 338 PRO OXT HXT sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'European Community Framework Programme' Poland 'Marie Curie FP7-Reintegration-Grant' 1 'National Science Centre' Poland UMO-2012/06/A/ST5/00224 2 'National Science Centre' Poland UMO-2014/12/W/NZ1/00457 3 'National Science Centre' Poland UMO-2011/01/D/NZ1/01169 4 'National Science Centre' Poland UMO-2012/07/E/NZ1/01907 5 'European Union structural funds' Poland POIG.02.01.00-12-064/08 6 'European Union structural funds' Poland POIG.02.01.00-12-167/08 7 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5C3T _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5J8O _atom_sites.fract_transf_matrix[1][1] 0.029143 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018122 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007054 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O S # loop_