HEADER TRANSFERASE 11-APR-16 5J9Y TITLE EGFR-T790M IN COMPLEX WITH PYRAZOLOPYRIMIDINE INHIBITOR 1B COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TYROSINE KINASE, COVALENT INHIBITOR, DRUG RESISTANCE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.BECKER,J.ENGEL,D.RAUH REVDAT 2 07-SEP-16 5J9Y 1 JRNL REVDAT 1 17-AUG-16 5J9Y 0 JRNL AUTH J.ENGEL,C.BECKER,J.LATEGAHN,M.KEUL,J.KETZER,T.MUHLENBERG, JRNL AUTH 2 L.KOLLIPARA,C.SCHULTZ-FADEMRECHT,R.P.ZAHEDI,S.BAUER,D.RAUH JRNL TITL INSIGHT INTO THE INHIBITION OF DRUG-RESISTANT MUTANTS OF THE JRNL TITL 2 RECEPTOR TYROSINE KINASE EGFR. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 55 10909 2016 JRNL REFN ESSN 1521-3773 JRNL PMID 27496389 JRNL DOI 10.1002/ANIE.201605011 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 625 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 877 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3650 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.5190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2405 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 12 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.567 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.308 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.273 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.558 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2497 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2443 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3381 ; 1.663 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5640 ; 2.534 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 299 ; 6.497 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;37.812 ;24.340 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 458 ;17.051 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.950 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 375 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2724 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 529 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1199 ; 5.651 ; 7.182 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1198 ; 5.642 ; 7.177 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1494 ; 8.874 ;10.752 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5J9Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000219423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920450 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOV. 2013 REMARK 200 DATA SCALING SOFTWARE : XSCALE 2014 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12497 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.13 REMARK 200 R MERGE (I) : 0.16100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.93200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 900 MM - 1100 MM NA/K REMARK 280 -TARTRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 72.19500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 72.19500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.19500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 72.19500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.19500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 72.19500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 ARG A 986 REMARK 465 MET A 987 REMARK 465 HIS A 988 REMARK 465 LEU A 989 REMARK 465 PRO A 990 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLU A 1004 REMARK 465 GLU A 1005 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 783 O THR A 785 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 831 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 962 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 962 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 748 62.00 -62.39 REMARK 500 GLU A 749 14.23 48.56 REMARK 500 LEU A 782 54.45 -93.36 REMARK 500 ARG A 836 -10.50 64.69 REMARK 500 ASP A 837 43.74 -141.67 REMARK 500 ASP A 855 84.26 49.91 REMARK 500 ASP A 855 85.23 48.26 REMARK 500 MET A1007 17.95 53.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6HL A 1101 DBREF 5J9Y A 697 1019 UNP P00533 EGFR_HUMAN 697 1019 SEQADV 5J9Y MET A 790 UNP P00533 THR 790 CONFLICT SEQRES 1 A 323 GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE LEU LYS GLU SEQRES 2 A 323 THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SER GLY ALA SEQRES 3 A 323 PHE GLY THR VAL TYR LYS GLY LEU TRP ILE PRO GLU GLY SEQRES 4 A 323 GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS GLU LEU ARG SEQRES 5 A 323 GLU ALA THR SER PRO LYS ALA ASN LYS GLU ILE LEU ASP SEQRES 6 A 323 GLU ALA TYR VAL MET ALA SER VAL ASP ASN PRO HIS VAL SEQRES 7 A 323 CYS ARG LEU LEU GLY ILE CYS LEU THR SER THR VAL GLN SEQRES 8 A 323 LEU ILE MET GLN LEU MET PRO PHE GLY CYS LEU LEU ASP SEQRES 9 A 323 TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SER GLN TYR SEQRES 10 A 323 LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY MET ASN SEQRES 11 A 323 TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG ASP LEU ALA SEQRES 12 A 323 ALA ARG ASN VAL LEU VAL LYS THR PRO GLN HIS VAL LYS SEQRES 13 A 323 ILE THR ASP PHE GLY LEU ALA LYS LEU LEU GLY ALA GLU SEQRES 14 A 323 GLU LYS GLU TYR HIS ALA GLU GLY GLY LYS VAL PRO ILE SEQRES 15 A 323 LYS TRP MET ALA LEU GLU SER ILE LEU HIS ARG ILE TYR SEQRES 16 A 323 THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL THR VAL SEQRES 17 A 323 TRP GLU LEU MET THR PHE GLY SER LYS PRO TYR ASP GLY SEQRES 18 A 323 ILE PRO ALA SER GLU ILE SER SER ILE LEU GLU LYS GLY SEQRES 19 A 323 GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE ASP VAL SEQRES 20 A 323 TYR MET ILE MET VAL LYS CYS TRP MET ILE ASP ALA ASP SEQRES 21 A 323 SER ARG PRO LYS PHE ARG GLU LEU ILE ILE GLU PHE SER SEQRES 22 A 323 LYS MET ALA ARG ASP PRO GLN ARG TYR LEU VAL ILE GLN SEQRES 23 A 323 GLY ASP GLU ARG MET HIS LEU PRO SER PRO THR ASP SER SEQRES 24 A 323 ASN PHE TYR ARG ALA LEU MET ASP GLU GLU ASP MET ASP SEQRES 25 A 323 ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE PRO HET 6HL A1101 30 HETNAM 6HL (R)-1-(3-(4-AMINO-3-(NAPHTHALEN-1-YL)-1H-PYRAZOLO[3,4- HETNAM 2 6HL D]PYRIMIDIN-1-YL)PIPERIDIN-1-YL)PROP-2-EN-1-ONE FORMUL 2 6HL C23 H22 N6 O FORMUL 3 HOH *12(H2 O) HELIX 1 AA1 SER A 752 SER A 768 1 17 HELIX 2 AA2 CYS A 797 HIS A 805 1 9 HELIX 3 AA3 LYS A 806 ILE A 809 5 4 HELIX 4 AA4 GLY A 810 ARG A 831 1 22 HELIX 5 AA5 ALA A 839 ARG A 841 5 3 HELIX 6 AA6 PRO A 877 MET A 881 5 5 HELIX 7 AA7 ALA A 882 ARG A 889 1 8 HELIX 8 AA8 THR A 892 THR A 909 1 18 HELIX 9 AA9 PRO A 919 GLY A 930 1 12 HELIX 10 AB1 THR A 940 TRP A 951 1 12 HELIX 11 AB2 ASP A 954 ARG A 958 5 5 HELIX 12 AB3 LYS A 960 ASP A 974 1 15 HELIX 13 AB4 PRO A 975 TYR A 978 5 4 HELIX 14 AB5 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 SER A 720 0 SHEET 2 AA1 5 THR A 725 TRP A 731 -1 O VAL A 726 N GLY A 719 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O ILE A 740 N TRP A 731 SHEET 4 AA1 5 VAL A 786 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 LEU A 782 -1 N GLY A 779 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 LINK SG CYS A 797 CBC 6HL A1101 1555 1555 1.57 SITE 1 AC1 10 ALA A 743 LYS A 745 GLU A 762 LEU A 788 SITE 2 AC1 10 MET A 790 GLN A 791 MET A 793 CYS A 797 SITE 3 AC1 10 ASP A 800 THR A 854 CRYST1 144.390 144.390 144.390 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006926 0.00000