HEADER OXIDOREDUCTASE 12-APR-16 5JAI TITLE YERSINIA PESTIS FABV VARIANT T276G COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENR; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: FABV, YPO4104, Y4119, YP_4011; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FATTY ACID BIOSYNTHESIS FABV, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PSCHIBUL,J.KUPER,M.HIRSCHBECK,C.KISKER REVDAT 3 10-JAN-24 5JAI 1 REMARK REVDAT 2 08-JUN-16 5JAI 1 JRNL REVDAT 1 25-MAY-16 5JAI 0 JRNL AUTH C.NECKLES,A.PSCHIBUL,C.T.LAI,M.HIRSCHBECK,J.KUPER,S.DAVOODI, JRNL AUTH 2 J.ZOU,N.LIU,P.PAN,S.SHAH,F.DARYAEE,G.R.BOMMINENI,C.LAI, JRNL AUTH 3 C.SIMMERLING,C.KISKER,P.J.TONGE JRNL TITL SELECTIVITY OF PYRIDONE- AND DIPHENYL ETHER-BASED INHIBITORS JRNL TITL 2 FOR THE YERSINIA PESTIS FABV ENOYL-ACP REDUCTASE. JRNL REF BIOCHEMISTRY V. 55 2992 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27136302 JRNL DOI 10.1021/ACS.BIOCHEM.5B01301 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 39876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3461 - 4.5779 0.94 2752 116 0.1585 0.1917 REMARK 3 2 4.5779 - 3.6342 0.96 2696 150 0.1360 0.1589 REMARK 3 3 3.6342 - 3.1749 0.97 2712 129 0.1704 0.2330 REMARK 3 4 3.1749 - 2.8847 0.98 2692 157 0.1884 0.2349 REMARK 3 5 2.8847 - 2.6780 0.98 2697 141 0.1946 0.2413 REMARK 3 6 2.6780 - 2.5201 0.98 2720 145 0.1992 0.2290 REMARK 3 7 2.5201 - 2.3939 0.99 2677 155 0.1936 0.2213 REMARK 3 8 2.3939 - 2.2897 0.99 2694 147 0.2059 0.2714 REMARK 3 9 2.2897 - 2.2016 0.99 2710 146 0.2059 0.2364 REMARK 3 10 2.2016 - 2.1256 0.99 2705 150 0.2138 0.2471 REMARK 3 11 2.1256 - 2.0591 1.00 2708 134 0.2340 0.2685 REMARK 3 12 2.0591 - 2.0003 0.99 2703 147 0.2463 0.2934 REMARK 3 13 2.0003 - 1.9476 1.00 2700 139 0.2678 0.3303 REMARK 3 14 1.9476 - 1.9001 1.00 2710 144 0.2834 0.3325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3562 REMARK 3 ANGLE : 0.978 4839 REMARK 3 CHIRALITY : 0.050 534 REMARK 3 PLANARITY : 0.005 649 REMARK 3 DIHEDRAL : 12.075 2145 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -5 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.5441 -5.5444 14.8908 REMARK 3 T TENSOR REMARK 3 T11: 0.3163 T22: 0.0905 REMARK 3 T33: 0.1801 T12: -0.0193 REMARK 3 T13: -0.0073 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.9685 L22: 2.7473 REMARK 3 L33: 1.4151 L12: -0.2652 REMARK 3 L13: 0.2283 L23: 0.7139 REMARK 3 S TENSOR REMARK 3 S11: -0.1099 S12: -0.0276 S13: 0.0485 REMARK 3 S21: 0.0094 S22: 0.0524 S23: -0.0402 REMARK 3 S31: -0.4158 S32: 0.1203 S33: 0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8334 -15.4093 2.4494 REMARK 3 T TENSOR REMARK 3 T11: 0.3587 T22: 0.2035 REMARK 3 T33: 0.3777 T12: 0.0165 REMARK 3 T13: -0.1270 T23: -0.0565 REMARK 3 L TENSOR REMARK 3 L11: 0.3756 L22: 3.2449 REMARK 3 L33: 1.5082 L12: 0.3386 REMARK 3 L13: 0.2009 L23: 0.5036 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.0497 S13: 0.0529 REMARK 3 S21: -0.4879 S22: -0.2082 S23: 0.7086 REMARK 3 S31: -0.1932 S32: -0.3194 S33: 0.1747 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4988 -20.7340 4.8592 REMARK 3 T TENSOR REMARK 3 T11: 0.2343 T22: 0.1198 REMARK 3 T33: 0.1992 T12: -0.0406 REMARK 3 T13: 0.0559 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.8563 L22: 2.5659 REMARK 3 L33: 1.7635 L12: -0.2112 REMARK 3 L13: 0.2145 L23: 0.4034 REMARK 3 S TENSOR REMARK 3 S11: -0.0390 S12: 0.0971 S13: -0.0971 REMARK 3 S21: -0.3644 S22: 0.0797 S23: -0.1515 REMARK 3 S31: -0.0645 S32: 0.2492 S33: -0.0121 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1227 -12.8937 -2.6946 REMARK 3 T TENSOR REMARK 3 T11: 0.3079 T22: 0.1079 REMARK 3 T33: 0.2071 T12: -0.0438 REMARK 3 T13: -0.0008 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.0084 L22: 3.1570 REMARK 3 L33: 0.9082 L12: -1.7675 REMARK 3 L13: 0.3959 L23: -0.6664 REMARK 3 S TENSOR REMARK 3 S11: 0.0943 S12: 0.0313 S13: -0.1819 REMARK 3 S21: -0.3548 S22: -0.0030 S23: 0.2968 REMARK 3 S31: -0.1232 S32: 0.0381 S33: -0.0919 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JAI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220245. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6-5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39909 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 1.15800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4BKR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM (NH4)2SO4, 100 MM MES PH 5.6-5.9 REMARK 280 26.5-37.5 % PEG4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.13667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.27333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.27333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.13667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 737 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 743 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H PHE A 10 O HOH A 505 1.54 REMARK 500 O HOH A 528 O HOH A 578 1.65 REMARK 500 O HOH A 740 O HOH A 788 1.91 REMARK 500 O HOH A 528 O HOH A 558 1.94 REMARK 500 O HOH A 691 O HOH A 762 1.98 REMARK 500 O HOH A 788 O HOH A 809 2.08 REMARK 500 O HOH A 513 O HOH A 679 2.09 REMARK 500 O HOH A 548 O HOH A 723 2.11 REMARK 500 O HOH A 559 O HOH A 794 2.15 REMARK 500 O GLU A 327 O HOH A 501 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 723 O HOH A 723 5554 1.91 REMARK 500 O HOH A 843 O HOH A 843 5555 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 138 40.13 -141.20 REMARK 500 TYR A 235 -92.45 -92.96 REMARK 500 TYR A 235 -93.32 -91.85 REMARK 500 HIS A 261 70.01 -101.14 REMARK 500 SER A 280 -11.20 112.98 REMARK 500 ASP A 320 45.58 -109.20 REMARK 500 PRO A 322 105.39 -56.20 REMARK 500 ASP A 325 -168.48 -116.55 REMARK 500 ASP A 338 126.31 -38.58 REMARK 500 ASP A 362 48.20 -100.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 839 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 840 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 841 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH A 842 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 843 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A 844 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH A 845 DISTANCE = 8.05 ANGSTROMS REMARK 525 HOH A 846 DISTANCE = 8.38 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 405 DBREF 5JAI A 1 399 UNP Q8Z9U1 FABV_YERPE 1 399 SEQADV 5JAI ARG A -6 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI GLY A -5 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI SER A -4 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI HIS A -3 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI MET A -2 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI LEU A -1 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI GLU A 0 UNP Q8Z9U1 EXPRESSION TAG SEQADV 5JAI GLY A 276 UNP Q8Z9U1 THR 276 ENGINEERED MUTATION SEQRES 1 A 406 ARG GLY SER HIS MET LEU GLU MET ILE ILE LYS PRO ARG SEQRES 2 A 406 VAL ARG GLY PHE ILE CYS VAL THR ALA HIS PRO THR GLY SEQRES 3 A 406 CYS GLU ALA ASN VAL LYS LYS GLN ILE ASP TYR VAL THR SEQRES 4 A 406 THR GLU GLY PRO ILE ALA ASN GLY PRO LYS ARG VAL LEU SEQRES 5 A 406 VAL ILE GLY ALA SER THR GLY TYR GLY LEU ALA ALA ARG SEQRES 6 A 406 ILE THR ALA ALA PHE GLY CYS GLY ALA ASP THR LEU GLY SEQRES 7 A 406 VAL PHE PHE GLU ARG PRO GLY GLU GLU GLY LYS PRO GLY SEQRES 8 A 406 THR SER GLY TRP TYR ASN SER ALA ALA PHE HIS LYS PHE SEQRES 9 A 406 ALA ALA GLN LYS GLY LEU TYR ALA LYS SER ILE ASN GLY SEQRES 10 A 406 ASP ALA PHE SER ASP GLU ILE LYS GLN LEU THR ILE ASP SEQRES 11 A 406 ALA ILE LYS GLN ASP LEU GLY GLN VAL ASP GLN VAL ILE SEQRES 12 A 406 TYR SER LEU ALA SER PRO ARG ARG THR HIS PRO LYS THR SEQRES 13 A 406 GLY GLU VAL PHE ASN SER ALA LEU LYS PRO ILE GLY ASN SEQRES 14 A 406 ALA VAL ASN LEU ARG GLY LEU ASP THR ASP LYS GLU VAL SEQRES 15 A 406 ILE LYS GLU SER VAL LEU GLN PRO ALA THR GLN SER GLU SEQRES 16 A 406 ILE ASP SER THR VAL ALA VAL MET GLY GLY GLU ASP TRP SEQRES 17 A 406 GLN MET TRP ILE ASP ALA LEU LEU ASP ALA GLY VAL LEU SEQRES 18 A 406 ALA GLU GLY ALA GLN THR THR ALA PHE THR TYR LEU GLY SEQRES 19 A 406 GLU LYS ILE THR HIS ASP ILE TYR TRP ASN GLY SER ILE SEQRES 20 A 406 GLY ALA ALA LYS LYS ASP LEU ASP GLN LYS VAL LEU ALA SEQRES 21 A 406 ILE ARG GLU SER LEU ALA ALA HIS GLY GLY GLY ASP ALA SEQRES 22 A 406 ARG VAL SER VAL LEU LYS ALA VAL VAL GLY GLN ALA SER SEQRES 23 A 406 SER ALA ILE PRO MET MET PRO LEU TYR LEU SER LEU LEU SEQRES 24 A 406 PHE LYS VAL MET LYS GLU LYS GLY THR HIS GLU GLY CYS SEQRES 25 A 406 ILE GLU GLN VAL TYR SER LEU TYR LYS ASP SER LEU CYS SEQRES 26 A 406 GLY ASP SER PRO HIS MET ASP GLN GLU GLY ARG LEU ARG SEQRES 27 A 406 ALA ASP TYR LYS GLU LEU ASP PRO GLU VAL GLN ASN GLN SEQRES 28 A 406 VAL GLN GLN LEU TRP ASP GLN VAL THR ASN ASP ASN ILE SEQRES 29 A 406 TYR GLN LEU THR ASP PHE VAL GLY TYR LYS SER GLU PHE SEQRES 30 A 406 LEU ASN LEU PHE GLY PHE GLY ILE ASP GLY VAL ASP TYR SEQRES 31 A 406 ASP ALA ASP VAL ASN PRO ASP VAL LYS ILE PRO ASN LEU SEQRES 32 A 406 ILE GLN GLY HET NAI A 401 73 HET DMS A 402 10 HET DMS A 403 10 HET DMS A 404 10 HET MES A 405 25 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM DMS DIMETHYL SULFOXIDE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN NAI NADH FORMUL 2 NAI C21 H29 N7 O14 P2 FORMUL 3 DMS 3(C2 H6 O S) FORMUL 6 MES C6 H13 N O4 S FORMUL 7 HOH *346(H2 O) HELIX 1 AA1 GLY A -5 GLU A 0 5 6 HELIX 2 AA2 HIS A 16 GLY A 35 1 20 HELIX 3 AA3 THR A 51 GLY A 64 1 14 HELIX 4 AA4 THR A 85 LYS A 101 1 17 HELIX 5 AA5 SER A 114 LEU A 129 1 16 HELIX 6 AA6 THR A 185 GLY A 197 1 13 HELIX 7 AA7 GLY A 198 GLY A 212 1 15 HELIX 8 AA8 GLU A 228 ASP A 233 1 6 HELIX 9 AA9 GLY A 238 ALA A 260 1 23 HELIX 10 AB1 ALA A 278 ILE A 282 5 5 HELIX 11 AB2 PRO A 283 LYS A 299 1 17 HELIX 12 AB3 GLY A 304 SER A 316 1 13 HELIX 13 AB4 ASP A 333 ASP A 338 1 6 HELIX 14 AB5 ASP A 338 ASP A 350 1 13 HELIX 15 AB6 ASN A 356 THR A 361 1 6 HELIX 16 AB7 ASP A 362 PHE A 374 1 13 SHEET 1 AA1 2 VAL A 7 ARG A 8 0 SHEET 2 AA1 2 ILE A 11 CYS A 12 -1 O ILE A 11 N ARG A 8 SHEET 1 AA2 8 LEU A 330 ARG A 331 0 SHEET 2 AA2 8 ASP A 265 VAL A 270 1 N VAL A 270 O LEU A 330 SHEET 3 AA2 8 LEU A 214 THR A 224 1 N ALA A 222 O SER A 269 SHEET 4 AA2 8 VAL A 132 TYR A 137 1 N TYR A 137 O THR A 221 SHEET 5 AA2 8 ARG A 43 ILE A 47 1 N ILE A 47 O ILE A 136 SHEET 6 AA2 8 ASP A 68 PHE A 73 1 O ASP A 68 N VAL A 44 SHEET 7 AA2 8 ALA A 105 ASN A 109 1 O ILE A 108 N GLY A 71 SHEET 8 AA2 8 LEU A 396 GLN A 398 1 O ILE A 397 N SER A 107 SHEET 1 AA3 2 ARG A 143 THR A 145 0 SHEET 2 AA3 2 VAL A 152 ASN A 154 -1 O PHE A 153 N ARG A 144 SHEET 1 AA4 2 VAL A 164 ASP A 170 0 SHEET 2 AA4 2 VAL A 175 LEU A 181 -1 O SER A 179 N LEU A 166 SITE 1 AC1 31 GLY A 48 ALA A 49 SER A 50 THR A 51 SITE 2 AC1 31 GLY A 52 TYR A 53 PHE A 73 PHE A 74 SITE 3 AC1 31 GLU A 75 GLY A 110 ASP A 111 ALA A 112 SITE 4 AC1 31 PHE A 113 SER A 138 LEU A 139 ALA A 140 SITE 5 AC1 31 SER A 141 PHE A 223 THR A 224 TYR A 225 SITE 6 AC1 31 LYS A 244 LEU A 271 LYS A 272 ALA A 273 SITE 7 AC1 31 VAL A 274 DMS A 402 MES A 405 HOH A 533 SITE 8 AC1 31 HOH A 574 HOH A 584 HOH A 636 SITE 1 AC2 7 TYR A 235 ALA A 273 MET A 285 NAI A 401 SITE 2 AC2 7 MES A 405 HOH A 576 HOH A 614 SITE 1 AC3 5 LYS A 26 ASN A 372 GLY A 377 ASP A 379 SITE 2 AC3 5 HOH A 569 SITE 1 AC4 7 GLU A 79 GLU A 80 LYS A 106 ASP A 390 SITE 2 AC4 7 ASN A 395 ILE A 397 HOH A 715 SITE 1 AC5 9 MET A 196 TYR A 235 GLY A 276 GLN A 277 SITE 2 AC5 9 ALA A 278 SER A 279 NAI A 401 DMS A 402 SITE 3 AC5 9 HOH A 619 CRYST1 102.385 102.385 84.410 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009767 0.005639 0.000000 0.00000 SCALE2 0.000000 0.011278 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011847 0.00000