HEADER RNA BINDING PROTEIN/ANTIMICROBIAL 13-APR-16 5JBQ TITLE EF-TU (ESCHERICHIA COLI) IN COMPLEX WITH THIOMURACIN ANALOG CAVEAT 5JBQ SER B 1 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR TU 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EF-TU 1,BACTERIOPHAGE Q BETA RNA-DIRECTED RNA POLYMERASE COMPND 5 SUBUNIT III,P-43; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: THIOMURACIN ANALOG; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: TUFA, B3339, JW3301; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS NATURAL PRODUCT INHIBITOR, ELONGATION FACTOR, RNA BINDING PROTEIN- KEYWDS 2 ANTIMICROBIAL COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.PALESTRANT,T.STAMS REVDAT 3 15-NOV-23 5JBQ 1 JRNL REMARK SEQRES HETSYN REVDAT 3 2 1 LINK ATOM REVDAT 2 10-AUG-16 5JBQ 1 JRNL REVDAT 1 13-JUL-16 5JBQ 0 JRNL AUTH M.J.LAMARCHE,J.A.LEEDS,J.BREWER,K.DEAN,J.DING,J.DZINK-FOX, JRNL AUTH 2 G.GAMBER,A.JAIN,R.KERRIGAN,P.KRASTEL,K.LEE,F.LOMBARDO, JRNL AUTH 3 D.MCKENNEY,G.NECKERMANN,C.OSBORNE,D.PALESTRANT,M.A.PATANE, JRNL AUTH 4 E.M.RANN,Z.ROBINSON,E.SCHMITT,T.STAMS,S.TIAMFOOK,D.YU, JRNL AUTH 5 L.WHITEHEAD JRNL TITL ANTIBACTERIAL AND SOLUBILITY OPTIMIZATION OF THIOMURACIN A. JRNL REF J.MED.CHEM. V. 59 6920 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 27355833 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00726 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.6 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 30901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1507 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 16 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2515 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2242 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2376 REMARK 3 BIN R VALUE (WORKING SET) : 0.2235 REMARK 3 BIN FREE R VALUE : 0.2352 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.53 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3117 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.39800 REMARK 3 B22 (A**2) : -2.56400 REMARK 3 B33 (A**2) : -2.83400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.268 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.192 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.172 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.181 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.168 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3218 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4373 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1136 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 76 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 483 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3218 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 421 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3744 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.16 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.58 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.96 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000220314. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 92 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31079 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.006 REMARK 200 RESOLUTION RANGE LOW (A) : 42.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: BUSTER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGSO4, 18% PEG3350, 100MM TRIS REMARK 280 CRYO 20% ETHYLENE GLYCOL, PH 8.2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.17500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.17500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 402 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 1 CA SER B 1 CB -0.118 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 57 -82.39 -84.68 REMARK 500 GLU A 143 -31.51 -132.42 REMARK 500 GLU A 215 -79.06 -110.94 REMARK 500 ILE A 247 -56.00 69.56 REMARK 500 ARG A 333 -87.44 61.33 REMARK 500 ASN B 3 -159.10 -107.21 REMARK 500 H14 B 5 -30.93 -157.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 25 OG1 REMARK 620 2 GDP A 401 O2B 86.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 510 O REMARK 620 2 HOH A 510 O 164.9 REMARK 620 3 HOH A 554 O 97.6 93.4 REMARK 620 4 HOH A 554 O 93.4 97.6 86.7 REMARK 620 5 HOH A 636 O 97.0 72.3 165.4 92.3 REMARK 620 6 HOH A 636 O 72.3 97.0 92.3 165.4 92.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF THIOMURACIN ANALOG DBREF 5JBQ A 0 393 UNP P0CE47 EFTU1_ECOLI 1 394 DBREF 5JBQ B 1 13 PDB 5JBQ 5JBQ 1 13 SEQRES 1 A 394 MET SER LYS GLU LYS PHE GLU ARG THR LYS PRO HIS VAL SEQRES 2 A 394 ASN VAL GLY THR ILE GLY HIS VAL ASP HIS GLY LYS THR SEQRES 3 A 394 THR LEU THR ALA ALA ILE THR THR VAL LEU ALA LYS THR SEQRES 4 A 394 TYR GLY GLY ALA ALA ARG ALA PHE ASP GLN ILE ASP ASN SEQRES 5 A 394 ALA PRO GLU GLU LYS ALA ARG GLY ILE THR ILE ASN THR SEQRES 6 A 394 SER HIS VAL GLU TYR ASP THR PRO THR ARG HIS TYR ALA SEQRES 7 A 394 HIS VAL ASP CYS PRO GLY HIS ALA ASP TYR VAL LYS ASN SEQRES 8 A 394 MET ILE THR GLY ALA ALA GLN MET ASP GLY ALA ILE LEU SEQRES 9 A 394 VAL VAL ALA ALA THR ASP GLY PRO MET PRO GLN THR ARG SEQRES 10 A 394 GLU HIS ILE LEU LEU GLY ARG GLN VAL GLY VAL PRO TYR SEQRES 11 A 394 ILE ILE VAL PHE LEU ASN LYS CYS ASP MET VAL ASP ASP SEQRES 12 A 394 GLU GLU LEU LEU GLU LEU VAL GLU MET GLU VAL ARG GLU SEQRES 13 A 394 LEU LEU SER GLN TYR ASP PHE PRO GLY ASP ASP THR PRO SEQRES 14 A 394 ILE VAL ARG GLY SER ALA LEU LYS ALA LEU GLU GLY ASP SEQRES 15 A 394 ALA GLU TRP GLU ALA LYS ILE LEU GLU LEU ALA GLY PHE SEQRES 16 A 394 LEU ASP SER TYR ILE PRO GLU PRO GLU ARG ALA ILE ASP SEQRES 17 A 394 LYS PRO PHE LEU LEU PRO ILE GLU ASP VAL PHE SER ILE SEQRES 18 A 394 SER GLY ARG GLY THR VAL VAL THR GLY ARG VAL GLU ARG SEQRES 19 A 394 GLY ILE ILE LYS VAL GLY GLU GLU VAL GLU ILE VAL GLY SEQRES 20 A 394 ILE LYS GLU THR GLN LYS SER THR CYS THR GLY VAL GLU SEQRES 21 A 394 MET PHE ARG LYS LEU LEU ASP GLU GLY ARG ALA GLY GLU SEQRES 22 A 394 ASN VAL GLY VAL LEU LEU ARG GLY ILE LYS ARG GLU GLU SEQRES 23 A 394 ILE GLU ARG GLY GLN VAL LEU ALA LYS PRO GLY THR ILE SEQRES 24 A 394 LYS PRO HIS THR LYS PHE GLU SER GLU VAL TYR ILE LEU SEQRES 25 A 394 SER LYS ASP GLU GLY GLY ARG HIS THR PRO PHE PHE LYS SEQRES 26 A 394 GLY TYR ARG PRO GLN PHE TYR PHE ARG THR THR ASP VAL SEQRES 27 A 394 THR GLY THR ILE GLU LEU PRO GLU GLY VAL GLU MET VAL SEQRES 28 A 394 MET PRO GLY ASP ASN ILE LYS MET VAL VAL THR LEU ILE SEQRES 29 A 394 HIS PRO ILE ALA MET ASP ASP GLY LEU ARG PHE ALA ILE SEQRES 30 A 394 ARG GLU GLY GLY ARG THR VAL GLY ALA GLY VAL VAL ALA SEQRES 31 A 394 LYS VAL LEU GLY SEQRES 1 B 13 SER BB9 ASN BB6 H14 BB9 TYR 05N BB9 BB9 MH6 BB9 6RK HET BB9 B 2 6 HET BB6 B 4 7 HET H14 B 5 11 HET BB9 B 6 6 HET 05N B 8 8 HET BB9 B 9 5 HET BB9 B 10 5 HET MH6 B 11 4 HET BB9 B 12 6 HET 6RK B 13 10 HET GDP A 401 28 HET MG A 402 1 HET MG A 403 1 HET SO4 A 404 5 HETNAM BB9 (2Z)-2-AMINO-3-SULFANYLPROP-2-ENOIC ACID HETNAM BB6 (2Z)-2-AMINO-3-SULFANYLBUT-2-ENOIC ACID HETNAM H14 (2S,3R)-BETA-HYDROXY-PHENYLALANINE HETNAM 05N (3R,4R)-4-HYDROXY-3-METHYL-L-PROLINE HETNAM MH6 3-HYDROXY-2-IMINOPROPANOIC ACID HETNAM 6RK 4-AZANYLCYCLOHEXANE-1-CARBOXYLIC ACID HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETSYN H14 BETA-HYDROXY-PHENYLALANINE; THREO-BETA-HYDROXY-L- HETSYN 2 H14 PHENYLALANINE; (BETAS)-BETA-HYDROXY-L-PHENYLALANINE; HETSYN 3 H14 L-THREO-3-PHENYLSERINE; L-THREO-BETA-PHENYLSERINE; 3- HETSYN 4 H14 HYDROXY-L-PHENYLALANINE FORMUL 2 BB9 5(C3 H5 N O2 S) FORMUL 2 BB6 C4 H7 N O2 S FORMUL 2 H14 C9 H11 N O3 FORMUL 2 05N C6 H11 N O3 FORMUL 2 MH6 C3 H5 N O3 FORMUL 2 6RK C7 H13 N O2 FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 MG 2(MG 2+) FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *224(H2 O) HELIX 1 AA1 LYS A 2 ARG A 7 5 6 HELIX 2 AA2 GLY A 23 GLY A 40 1 18 HELIX 3 AA3 ALA A 45 ASN A 51 1 7 HELIX 4 AA4 GLY A 83 GLY A 94 1 12 HELIX 5 AA5 MET A 112 GLY A 126 1 15 HELIX 6 AA6 LYS A 136 VAL A 140 5 5 HELIX 7 AA7 GLU A 143 TYR A 160 1 18 HELIX 8 AA8 PRO A 163 THR A 167 5 5 HELIX 9 AA9 SER A 173 GLU A 179 1 7 HELIX 10 AB1 ASP A 181 ILE A 199 1 19 HELIX 11 AB2 ARG A 204 LYS A 208 5 5 HELIX 12 AB3 LYS A 282 ILE A 286 5 5 SHEET 1 AA1 6 SER A 65 ASP A 70 0 SHEET 2 AA1 6 HIS A 75 ASP A 80 -1 O HIS A 78 N VAL A 67 SHEET 3 AA1 6 HIS A 11 ILE A 17 1 N VAL A 14 O ALA A 77 SHEET 4 AA1 6 ALA A 101 ALA A 106 1 O ILE A 102 N GLY A 15 SHEET 5 AA1 6 ILE A 130 ASN A 135 1 O ILE A 131 N LEU A 103 SHEET 6 AA1 6 ILE A 169 ARG A 171 1 O VAL A 170 N LEU A 134 SHEET 1 AA2 2 GLU A 54 LYS A 56 0 SHEET 2 AA2 2 THR A 61 ASN A 63 -1 O ILE A 62 N GLU A 55 SHEET 1 AA3 7 LEU A 211 PRO A 213 0 SHEET 2 AA3 7 VAL A 291 ALA A 293 -1 O LEU A 292 N LEU A 212 SHEET 3 AA3 7 GLU A 241 VAL A 245 -1 N GLU A 243 O ALA A 293 SHEET 4 AA3 7 GLN A 251 MET A 260 -1 O SER A 253 N VAL A 242 SHEET 5 AA3 7 ASN A 273 LEU A 278 -1 O LEU A 277 N THR A 256 SHEET 6 AA3 7 GLY A 224 ARG A 230 -1 N VAL A 227 O VAL A 276 SHEET 7 AA3 7 VAL A 217 ILE A 220 -1 N PHE A 218 O VAL A 226 SHEET 1 AA4 5 LEU A 211 PRO A 213 0 SHEET 2 AA4 5 VAL A 291 ALA A 293 -1 O LEU A 292 N LEU A 212 SHEET 3 AA4 5 GLU A 241 VAL A 245 -1 N GLU A 243 O ALA A 293 SHEET 4 AA4 5 GLN A 251 MET A 260 -1 O SER A 253 N VAL A 242 SHEET 5 AA4 5 LYS A 263 LEU A 265 -1 O LEU A 265 N VAL A 258 SHEET 1 AA5 2 ILE A 235 LYS A 237 0 SHEET 2 AA5 2 GLU A 267 ARG A 269 -1 O GLY A 268 N ILE A 236 SHEET 1 AA6 7 LYS A 299 ILE A 310 0 SHEET 2 AA6 7 ASN A 355 MET A 368 -1 O LEU A 362 N THR A 302 SHEET 3 AA6 7 THR A 335 GLU A 342 -1 N THR A 340 O THR A 361 SHEET 4 AA6 7 GLN A 329 PHE A 332 -1 N PHE A 330 O VAL A 337 SHEET 5 AA6 7 ARG A 373 GLU A 378 -1 O ALA A 375 N TYR A 331 SHEET 6 AA6 7 ARG A 381 GLY A 393 -1 O GLY A 386 N PHE A 374 SHEET 7 AA6 7 LYS A 299 ILE A 310 -1 N TYR A 309 O ALA A 385 SHEET 1 AA7 2 PHE A 322 PHE A 323 0 SHEET 2 AA7 2 MET A 349 VAL A 350 -1 O VAL A 350 N PHE A 322 LINK C SER B 1 SG BB9 B 2 1555 1555 1.75 LINK C SER B 1 N BB9 B 2 1555 1555 1.34 LINK CA SER B 1 C BB9 B 10 1555 1555 1.43 LINK CB SER B 1 CB MH6 B 11 1555 1555 1.40 LINK C BB9 B 2 N ASN B 3 1555 1555 1.33 LINK C ASN B 3 SG BB6 B 4 1555 1555 1.74 LINK C ASN B 3 N BB6 B 4 1555 1555 1.33 LINK C BB6 B 4 N H14 B 5 1555 1555 1.34 LINK C H14 B 5 SG BB9 B 6 1555 1555 1.75 LINK C H14 B 5 N BB9 B 6 1555 1555 1.34 LINK C BB9 B 6 N TYR B 7 1555 1555 1.33 LINK C TYR B 7 N 05N B 8 1555 1555 1.36 LINK C 05N B 8 N BB9 B 9 1555 1555 1.33 LINK C 05N B 8 SG BB9 B 9 1555 1555 1.76 LINK C BB9 B 9 SG BB9 B 10 1555 1555 1.74 LINK C BB9 B 9 N BB9 B 10 1555 1555 1.32 LINK C BB9 B 10 N MH6 B 11 1555 1555 1.35 LINK C MH6 B 11 N BB9 B 12 1555 1555 1.33 LINK C MH6 B 11 SG BB9 B 12 1555 1555 1.76 LINK C BB9 B 12 N 6RK B 13 1555 1555 1.34 LINK OG1 THR A 25 MG MG A 403 1555 1555 2.07 LINK O2B GDP A 401 MG MG A 403 1555 1555 2.20 LINK MG MG A 402 O HOH A 510 1555 1555 2.41 LINK MG MG A 402 O HOH A 510 1555 2555 2.41 LINK MG MG A 402 O HOH A 554 1555 1555 2.12 LINK MG MG A 402 O HOH A 554 1555 2555 2.12 LINK MG MG A 402 O HOH A 636 1555 1555 2.22 LINK MG MG A 402 O HOH A 636 1555 2555 2.22 CISPEP 1 GLY A 379 GLY A 380 0 -2.50 SITE 1 AC1 20 ASP A 21 HIS A 22 GLY A 23 LYS A 24 SITE 2 AC1 20 THR A 25 THR A 26 PHE A 46 ASN A 135 SITE 3 AC1 20 LYS A 136 ASP A 138 MET A 139 SER A 173 SITE 4 AC1 20 ALA A 174 LEU A 175 MG A 403 HOH A 576 SITE 5 AC1 20 HOH A 578 HOH A 603 HOH A 627 HOH A 654 SITE 1 AC2 3 HOH A 510 HOH A 554 HOH A 636 SITE 1 AC3 2 THR A 25 GDP A 401 SITE 1 AC4 5 ARG A 262 ARG A 318 HIS A 319 THR A 320 SITE 2 AC4 5 ARG A 381 SITE 1 AC5 27 THR A 73 ALA A 182 GLU A 215 ILE A 220 SITE 2 AC5 27 ARG A 223 THR A 228 GLY A 257 GLU A 259 SITE 3 AC5 27 PHE A 261 ARG A 262 LEU A 264 ASN A 273 SITE 4 AC5 27 VAL A 274 GLY A 275 LEU A 277 THR A 320 SITE 5 AC5 27 PRO A 321 PHE A 323 LYS A 324 GLY A 325 SITE 6 AC5 27 HOH A 527 HOH B 101 HOH B 102 HOH B 103 SITE 7 AC5 27 HOH B 104 HOH B 105 HOH B 106 CRYST1 80.350 125.340 45.400 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012446 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022026 0.00000