HEADER MEMBRANE PROTEIN 16-APR-16 5JDG TITLE STRUCTURAL MECHANISMS OF EXTRACELLULAR ION EXCHANGE AND INDUCED TITLE 2 BINDING-SITE OCCLUSION IN THE SODIUM-CALCIUM EXCHANGER NCX_MJ SOAKED TITLE 3 WITH 2.5 MM NA+ AND 0.1MM CA2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM-CALCIUM EXCHANGER NCX_MJ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC SOURCE 3 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440); SOURCE 4 ORGANISM_TAXID: 243232; SOURCE 5 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 6 GENE: MJ0091; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NA+/CA2+ EXCHANGE, CALCIUM SIGNALLING, MEMBRANE TRANSPORTER, INDUCED KEYWDS 2 CONFORMATIONAL CHANGE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LIAO,Y.X.JIANG,J.D.FARALDO-GOMEZ REVDAT 6 27-SEP-23 5JDG 1 LINK REVDAT 5 20-NOV-19 5JDG 1 REMARK REVDAT 4 20-SEP-17 5JDG 1 REMARK REVDAT 3 15-JUN-16 5JDG 1 JRNL REVDAT 2 01-JUN-16 5JDG 1 JRNL REVDAT 1 11-MAY-16 5JDG 0 JRNL AUTH J.LIAO,F.MARINELLI,C.LEE,Y.HUANG,J.D.FARALDO-GOMEZ,Y.JIANG JRNL TITL MECHANISM OF EXTRACELLULAR ION EXCHANGE AND BINDING-SITE JRNL TITL 2 OCCLUSION IN A SODIUM/CALCIUM EXCHANGER. JRNL REF NAT.STRUCT.MOL.BIOL. V. 23 590 2016 JRNL REFN ESSN 1545-9985 JRNL PMID 27183196 JRNL DOI 10.1038/NSMB.3230 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.LIAO,H.LI,W.ZENG,D.B.SAUER,R.BELMARES,Y.JIANG REMARK 1 TITL STRUCTURAL INSIGHT INTO THE ION-EXCHANGE MECHANISM OF THE REMARK 1 TITL 2 SODIUM/CALCIUM EXCHANGER. REMARK 1 REF SCIENCE V. 335 686 2012 REMARK 1 REFN ESSN 1095-9203 REMARK 1 PMID 22323814 REMARK 1 DOI 10.1126/SCIENCE.1215759 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 13736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1575 - 5.1795 1.00 1349 150 0.2041 0.2915 REMARK 3 2 5.1795 - 4.1141 0.93 1202 134 0.1796 0.2460 REMARK 3 3 4.1141 - 3.5949 1.00 1264 140 0.1880 0.2432 REMARK 3 4 3.5949 - 3.2666 1.00 1244 139 0.1919 0.2414 REMARK 3 5 3.2666 - 3.0327 1.00 1246 138 0.1939 0.2601 REMARK 3 6 3.0327 - 2.8540 1.00 1242 138 0.1963 0.2794 REMARK 3 7 2.8540 - 2.7112 1.00 1242 138 0.2073 0.2639 REMARK 3 8 2.7112 - 2.5932 1.00 1218 136 0.2080 0.2640 REMARK 3 9 2.5932 - 2.4934 1.00 1245 138 0.2279 0.2646 REMARK 3 10 2.4934 - 2.4074 0.91 1110 123 0.2544 0.3102 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2411 REMARK 3 ANGLE : 0.686 3213 REMARK 3 CHIRALITY : 0.022 388 REMARK 3 PLANARITY : 0.003 373 REMARK 3 DIHEDRAL : 10.719 869 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JDG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13781 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.92200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3V5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.73850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.14850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.14850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.73850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 149 REMARK 465 ILE A 150 REMARK 465 GLU A 151 REMARK 465 GLU A 152 REMARK 465 ASN A 153 REMARK 465 ASN A 154 REMARK 465 ASP A 155 REMARK 465 GLY A 302 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 3 -48.39 65.05 REMARK 500 THR A 44 -81.24 -116.16 REMARK 500 ASN A 157 71.23 -56.56 REMARK 500 ASP A 194 17.50 58.61 REMARK 500 ILE A 195 49.95 -102.75 REMARK 500 ASP A 197 -151.47 -88.64 REMARK 500 ASP A 197 -157.11 -89.16 REMARK 500 GLU A 257 64.95 -113.48 REMARK 500 SER A 278 -128.36 -139.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 403 REMARK 610 1PE A 405 REMARK 610 1PE A 406 REMARK 610 1PE A 407 REMARK 610 OLC A 408 REMARK 610 OLC A 409 REMARK 610 OLC A 410 REMARK 610 MYS A 411 REMARK 610 MYS A 413 REMARK 610 MYS A 414 REMARK 610 MYS A 415 REMARK 610 MYS A 416 REMARK 610 MYS A 417 REMARK 610 MYS A 418 REMARK 610 MYS A 419 REMARK 610 MYS A 420 REMARK 610 MYS A 421 REMARK 610 MYS A 422 REMARK 610 MYS A 423 REMARK 610 MYS A 424 REMARK 610 MYS A 425 REMARK 610 MYS A 426 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 47 O REMARK 620 2 THR A 50 OG1 77.3 REMARK 620 3 SER A 51 OG 80.0 138.1 REMARK 620 4 GLU A 213 OE2 143.2 93.1 84.5 REMARK 620 5 SER A 236 OG 112.8 108.5 112.7 103.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 50 O REMARK 620 2 GLU A 54 OE1 95.0 REMARK 620 3 GLU A 54 OE2 147.7 54.6 REMARK 620 4 THR A 209 O 115.7 96.4 81.7 REMARK 620 5 GLU A 213 OE1 96.5 166.8 112.8 84.5 REMARK 620 6 GLU A 213 OE2 85.5 119.5 99.8 137.3 55.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 427 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 118 O REMARK 620 2 ASP A 121 OD1 82.3 REMARK 620 3 GLY A 122 O 82.1 88.4 REMARK 620 4 ASP A 127 OD2 93.5 175.8 90.5 REMARK 620 5 OLC A 410 O25 105.9 91.3 171.8 90.4 REMARK 620 6 HOH A 525 O 170.8 106.9 98.8 77.3 73.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 427 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JDQ RELATED DB: PDB REMARK 900 RELATED ID: 5JDN RELATED DB: PDB REMARK 900 RELATED ID: 5JDM RELATED DB: PDB REMARK 900 RELATED ID: 5JDL RELATED DB: PDB REMARK 900 RELATED ID: 5JDH RELATED DB: PDB REMARK 900 RELATED ID: 5JDF RELATED DB: PDB REMARK 900 RELATED ID: 5HWX RELATED DB: PDB REMARK 900 RELATED ID: 5HWY RELATED DB: PDB REMARK 900 RELATED ID: 5HXC RELATED DB: PDB REMARK 900 RELATED ID: 5HXE RELATED DB: PDB REMARK 900 RELATED ID: 5HXH RELATED DB: PDB REMARK 900 RELATED ID: 5HXR RELATED DB: PDB REMARK 900 RELATED ID: 5HXS RELATED DB: PDB REMARK 900 RELATED ID: 5HYA RELATED DB: PDB DBREF 5JDG A 1 302 UNP Q57556 Y091_METJA 1 302 SEQADV 5JDG VAL A 2 UNP Q57556 LEU 2 ENGINEERED MUTATION SEQRES 1 A 302 MET VAL ILE LEU GLY VAL GLY TYR PHE LEU LEU GLY LEU SEQRES 2 A 302 ILE LEU LEU TYR TYR GLY SER ASP TRP PHE VAL LEU GLY SEQRES 3 A 302 SER GLU ARG ILE ALA ARG HIS PHE ASN VAL SER ASN PHE SEQRES 4 A 302 VAL ILE GLY ALA THR VAL MET ALA ILE GLY THR SER LEU SEQRES 5 A 302 PRO GLU ILE LEU THR SER ALA TYR ALA SER TYR MET HIS SEQRES 6 A 302 ALA PRO GLY ILE SER ILE GLY ASN ALA ILE GLY SER CYS SEQRES 7 A 302 ILE CYS ASN ILE GLY LEU VAL LEU GLY LEU SER ALA ILE SEQRES 8 A 302 ILE SER PRO ILE ILE VAL ASP LYS ASN LEU GLN LYS ASN SEQRES 9 A 302 ILE LEU VAL TYR LEU LEU PHE VAL ILE PHE ALA ALA VAL SEQRES 10 A 302 ILE GLY ILE ASP GLY PHE SER TRP ILE ASP GLY VAL VAL SEQRES 11 A 302 LEU LEU ILE LEU PHE ILE ILE TYR LEU ARG TRP THR VAL SEQRES 12 A 302 LYS ASN GLY SER ALA GLU ILE GLU GLU ASN ASN ASP LYS SEQRES 13 A 302 ASN ASN PRO SER VAL VAL PHE SER LEU VAL LEU LEU ILE SEQRES 14 A 302 ILE GLY LEU ILE GLY VAL LEU VAL GLY ALA GLU LEU PHE SEQRES 15 A 302 VAL ASP GLY ALA LYS LYS ILE ALA LEU ALA LEU ASP ILE SEQRES 16 A 302 SER ASP LYS VAL ILE GLY PHE THR LEU VAL ALA PHE GLY SEQRES 17 A 302 THR SER LEU PRO GLU LEU MET VAL SER LEU ALA ALA ALA SEQRES 18 A 302 LYS ARG ASN LEU GLY GLY MET VAL LEU GLY ASN VAL ILE SEQRES 19 A 302 GLY SER ASN ILE ALA ASP ILE GLY GLY ALA LEU ALA VAL SEQRES 20 A 302 GLY SER LEU PHE MET HIS LEU PRO ALA GLU ASN VAL GLN SEQRES 21 A 302 MET ALA VAL LEU VAL ILE MET SER LEU LEU LEU TYR LEU SEQRES 22 A 302 PHE ALA LYS TYR SER LYS ILE GLY ARG TRP GLN GLY ILE SEQRES 23 A 302 LEU PHE LEU ALA LEU TYR ILE ILE ALA ILE ALA SER LEU SEQRES 24 A 302 ARG MET GLY HET NA A 401 1 HET NA A 402 1 HET 1PE A 403 13 HET PEG A 404 7 HET 1PE A 405 4 HET 1PE A 406 4 HET 1PE A 407 4 HET OLC A 408 9 HET OLC A 409 8 HET OLC A 410 9 HET MYS A 411 5 HET MYS A 412 15 HET MYS A 413 8 HET MYS A 414 10 HET MYS A 415 12 HET MYS A 416 8 HET MYS A 417 5 HET MYS A 418 5 HET MYS A 419 5 HET MYS A 420 10 HET MYS A 421 4 HET MYS A 422 4 HET MYS A 423 4 HET MYS A 424 3 HET MYS A 425 3 HET MYS A 426 3 HET CA A 427 1 HETNAM NA SODIUM ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM MYS PENTADECANE HETNAM CA CALCIUM ION HETSYN 1PE PEG400 HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 NA 2(NA 1+) FORMUL 4 1PE 4(C10 H22 O6) FORMUL 5 PEG C4 H10 O3 FORMUL 9 OLC 3(C21 H40 O4) FORMUL 12 MYS 16(C15 H32) FORMUL 28 CA CA 2+ FORMUL 29 HOH *42(H2 O) HELIX 1 AA1 ILE A 3 PHE A 34 1 32 HELIX 2 AA2 SER A 37 THR A 44 1 8 HELIX 3 AA3 THR A 44 SER A 51 1 8 HELIX 4 AA4 SER A 51 MET A 64 1 14 HELIX 5 AA5 ALA A 66 LEU A 84 1 19 HELIX 6 AA6 LEU A 84 SER A 93 1 10 HELIX 7 AA7 ASP A 98 GLY A 119 1 22 HELIX 8 AA8 SER A 124 SER A 147 1 24 HELIX 9 AA9 ASN A 158 LEU A 193 1 36 HELIX 10 AB1 GLY A 201 THR A 209 1 9 HELIX 11 AB2 SER A 210 ARG A 223 1 14 HELIX 12 AB3 LEU A 225 GLY A 242 1 18 HELIX 13 AB4 GLY A 243 MET A 252 1 10 HELIX 14 AB5 GLU A 257 SER A 278 1 22 HELIX 15 AB6 GLY A 281 LEU A 299 1 19 LINK O ALA A 47 NA NA A 401 1555 1555 2.48 LINK OG1 THR A 50 NA NA A 401 1555 1555 2.39 LINK O THR A 50 NA NA A 402 1555 1555 2.35 LINK OG SER A 51 NA NA A 401 1555 1555 2.46 LINK OE1 GLU A 54 NA NA A 402 1555 1555 2.31 LINK OE2 GLU A 54 NA NA A 402 1555 1555 2.47 LINK O ILE A 118 CA CA A 427 1555 1555 2.34 LINK OD1 ASP A 121 CA CA A 427 1555 1555 2.45 LINK O GLY A 122 CA CA A 427 1555 1555 2.35 LINK OD2 ASP A 127 CA CA A 427 1555 1555 2.42 LINK O THR A 209 NA NA A 402 1555 1555 2.33 LINK OE2 GLU A 213 NA NA A 401 1555 1555 2.39 LINK OE1 GLU A 213 NA NA A 402 1555 1555 2.38 LINK OE2 GLU A 213 NA NA A 402 1555 1555 2.36 LINK OG SER A 236 NA NA A 401 1555 1555 2.34 LINK O25 OLC A 410 CA CA A 427 1555 1555 2.71 LINK CA CA A 427 O HOH A 525 1555 1555 2.51 CISPEP 1 ILE A 200 GLY A 201 0 11.31 SITE 1 AC1 5 ALA A 47 THR A 50 SER A 51 GLU A 213 SITE 2 AC1 5 SER A 236 SITE 1 AC2 5 THR A 50 SER A 51 GLU A 54 THR A 209 SITE 2 AC2 5 GLU A 213 SITE 1 AC3 6 TYR A 17 SER A 20 MET A 215 LEU A 218 SITE 2 AC3 6 ALA A 219 LYS A 222 SITE 1 AC4 2 ARG A 140 ALA A 297 SITE 1 AC5 5 SER A 124 TRP A 125 SER A 249 MET A 252 SITE 2 AC5 5 HIS A 253 SITE 1 AC6 1 ARG A 282 SITE 1 AC7 1 ALA A 148 SITE 1 AC8 7 SER A 37 ASN A 38 ASN A 224 LEU A 225 SITE 2 AC8 7 GLY A 226 GLY A 227 HOH A 512 SITE 1 AC9 1 GLU A 180 SITE 1 AD1 5 VAL A 117 ASP A 121 ASP A 127 MYS A 417 SITE 2 AD1 5 CA A 427 SITE 1 AD2 2 GLN A 260 LEU A 299 SITE 1 AD3 5 ILE A 91 TRP A 125 LEU A 250 ILE A 286 SITE 2 AD3 5 ALA A 290 SITE 1 AD4 3 VAL A 107 PHE A 114 LEU A 134 SITE 1 AD5 3 LEU A 291 SER A 298 ARG A 300 SITE 1 AD6 3 PHE A 9 PHE A 114 VAL A 117 SITE 1 AD7 2 ASP A 127 OLC A 410 SITE 1 AD8 1 TYR A 272 SITE 1 AD9 1 ASN A 258 SITE 1 AE1 3 VAL A 45 ILE A 48 VAL A 143 SITE 1 AE2 2 LEU A 250 ARG A 282 SITE 1 AE3 1 PHE A 274 SITE 1 AE4 1 TYR A 60 SITE 1 AE5 6 ILE A 118 ASP A 121 GLY A 122 ASP A 127 SITE 2 AE5 6 OLC A 410 HOH A 525 CRYST1 49.477 72.470 96.297 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020211 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010385 0.00000