HEADER MEMBRANE PROTEIN 17-APR-16 5JDN TITLE STRUCTURAL MECHANISMS OF EXTRACELLULAR ION EXCHANGE AND INDUCED TITLE 2 BINDING-SITE OCCLUSION IN THE SODIUM-CALCIUM EXCHANGER NCX_MJ SOAKED TITLE 3 WITH 10 MM NA+ AND 10MM SR2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM-CALCIUM EXCHANGER NCX_MJ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII (STRAIN ATCC SOURCE 3 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440); SOURCE 4 ORGANISM_TAXID: 243232; SOURCE 5 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 6 GENE: MJ0091; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NA+/CA2+ EXCHANGE, CALCIUM SIGNALLING, MEMBRANE TRANSPORTER, INDUCED KEYWDS 2 CONFORMATIONAL CHANGE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LIAO,Y.X.JIANG,J.D.FARALDO-GOMEZ REVDAT 6 27-SEP-23 5JDN 1 LINK REVDAT 5 20-NOV-19 5JDN 1 REMARK REVDAT 4 20-SEP-17 5JDN 1 REMARK REVDAT 3 15-JUN-16 5JDN 1 JRNL REVDAT 2 01-JUN-16 5JDN 1 JRNL REVDAT 1 11-MAY-16 5JDN 0 JRNL AUTH J.LIAO,F.MARINELLI,C.LEE,Y.HUANG,J.D.FARALDO-GOMEZ,Y.JIANG JRNL TITL MECHANISM OF EXTRACELLULAR ION EXCHANGE AND BINDING-SITE JRNL TITL 2 OCCLUSION IN A SODIUM/CALCIUM EXCHANGER. JRNL REF NAT.STRUCT.MOL.BIOL. V. 23 590 2016 JRNL REFN ESSN 1545-9985 JRNL PMID 27183196 JRNL DOI 10.1038/NSMB.3230 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.LIAO,H.LI,W.ZENG,D.B.SAUER,R.BELMARES,Y.JIANG REMARK 1 TITL STRUCTURAL INSIGHT INTO THE ION-EXCHANGE MECHANISM OF THE REMARK 1 TITL 2 SODIUM/CALCIUM EXCHANGER. REMARK 1 REF SCIENCE V. 335 686 2012 REMARK 1 REFN ESSN 1095-9203 REMARK 1 PMID 22323814 REMARK 1 DOI 10.1126/SCIENCE.1215759 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 16488 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1649 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1469 - 5.1863 0.99 1345 150 0.2121 0.2724 REMARK 3 2 5.1863 - 4.1179 1.00 1295 144 0.2058 0.2273 REMARK 3 3 4.1179 - 3.5977 1.00 1265 141 0.2025 0.2284 REMARK 3 4 3.5977 - 3.2689 1.00 1254 139 0.1954 0.2620 REMARK 3 5 3.2689 - 3.0347 1.00 1246 139 0.1893 0.2409 REMARK 3 6 3.0347 - 2.8559 1.00 1252 138 0.1762 0.2376 REMARK 3 7 2.8559 - 2.7129 1.00 1243 138 0.1861 0.2388 REMARK 3 8 2.7129 - 2.5948 1.00 1227 136 0.1824 0.2336 REMARK 3 9 2.5948 - 2.4949 1.00 1242 139 0.1903 0.2683 REMARK 3 10 2.4949 - 2.4088 1.00 1226 135 0.2168 0.2851 REMARK 3 11 2.4088 - 2.3335 0.99 1219 136 0.2229 0.2576 REMARK 3 12 2.3335 - 2.2668 0.84 1025 114 0.2460 0.2943 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2411 REMARK 3 ANGLE : 1.057 3246 REMARK 3 CHIRALITY : 0.036 392 REMARK 3 PLANARITY : 0.004 383 REMARK 3 DIHEDRAL : 11.799 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JDN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16546 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.95800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3V5U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.83500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.21400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.23150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.21400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.83500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.23150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 152 REMARK 465 ASN A 153 REMARK 465 ASN A 154 REMARK 465 ASP A 155 REMARK 465 GLY A 302 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 184 NZ LYS A 188 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 44 -81.28 -110.41 REMARK 500 SER A 93 85.36 -151.62 REMARK 500 MET A 252 145.33 -173.40 REMARK 500 SER A 278 -127.85 -149.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 532 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 533 DISTANCE = 7.71 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 405 REMARK 610 MYS A 407 REMARK 610 MYS A 408 REMARK 610 MYS A 409 REMARK 610 MYS A 410 REMARK 610 1PE A 412 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 47 O REMARK 620 2 THR A 50 OG1 84.9 REMARK 620 3 SER A 51 OG 77.7 142.8 REMARK 620 4 GLU A 213 OE2 160.4 90.6 95.0 REMARK 620 5 SER A 236 OG 106.6 101.1 115.3 93.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 402 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 50 O REMARK 620 2 GLU A 54 OE1 86.9 REMARK 620 3 GLU A 54 OE2 139.8 52.9 REMARK 620 4 THR A 209 O 103.1 87.9 78.5 REMARK 620 5 GLU A 213 OE1 87.8 174.5 132.4 91.9 REMARK 620 6 GLU A 213 OE2 81.1 124.4 119.0 147.7 55.9 REMARK 620 7 HOH A 504 O 125.5 88.5 60.9 131.0 95.7 58.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SR A 403 SR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 118 O REMARK 620 2 ASP A 121 OD1 88.7 REMARK 620 3 GLY A 122 O 78.4 82.4 REMARK 620 4 ASP A 127 OD2 93.5 165.3 83.7 REMARK 620 5 OLC A 404 O23 81.7 119.5 150.0 75.3 REMARK 620 6 OLC A 404 O25 127.9 80.6 148.0 109.0 61.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SR A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MYS A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 412 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JDQ RELATED DB: PDB REMARK 900 RELATED ID: 5JDM RELATED DB: PDB REMARK 900 RELATED ID: 5JDL RELATED DB: PDB REMARK 900 RELATED ID: 5JDH RELATED DB: PDB REMARK 900 RELATED ID: 5JDG RELATED DB: PDB REMARK 900 RELATED ID: 5JDF RELATED DB: PDB REMARK 900 RELATED ID: 5HWX RELATED DB: PDB REMARK 900 RELATED ID: 5HWY RELATED DB: PDB REMARK 900 RELATED ID: 5HXC RELATED DB: PDB REMARK 900 RELATED ID: 5HXE RELATED DB: PDB REMARK 900 RELATED ID: 5HXH RELATED DB: PDB REMARK 900 RELATED ID: 5HXR RELATED DB: PDB REMARK 900 RELATED ID: 5HXS RELATED DB: PDB REMARK 900 RELATED ID: 5HYA RELATED DB: PDB DBREF 5JDN A 1 302 UNP Q57556 Y091_METJA 1 302 SEQADV 5JDN VAL A 2 UNP Q57556 LEU 2 ENGINEERED MUTATION SEQRES 1 A 302 MET VAL ILE LEU GLY VAL GLY TYR PHE LEU LEU GLY LEU SEQRES 2 A 302 ILE LEU LEU TYR TYR GLY SER ASP TRP PHE VAL LEU GLY SEQRES 3 A 302 SER GLU ARG ILE ALA ARG HIS PHE ASN VAL SER ASN PHE SEQRES 4 A 302 VAL ILE GLY ALA THR VAL MET ALA ILE GLY THR SER LEU SEQRES 5 A 302 PRO GLU ILE LEU THR SER ALA TYR ALA SER TYR MET HIS SEQRES 6 A 302 ALA PRO GLY ILE SER ILE GLY ASN ALA ILE GLY SER CYS SEQRES 7 A 302 ILE CYS ASN ILE GLY LEU VAL LEU GLY LEU SER ALA ILE SEQRES 8 A 302 ILE SER PRO ILE ILE VAL ASP LYS ASN LEU GLN LYS ASN SEQRES 9 A 302 ILE LEU VAL TYR LEU LEU PHE VAL ILE PHE ALA ALA VAL SEQRES 10 A 302 ILE GLY ILE ASP GLY PHE SER TRP ILE ASP GLY VAL VAL SEQRES 11 A 302 LEU LEU ILE LEU PHE ILE ILE TYR LEU ARG TRP THR VAL SEQRES 12 A 302 LYS ASN GLY SER ALA GLU ILE GLU GLU ASN ASN ASP LYS SEQRES 13 A 302 ASN ASN PRO SER VAL VAL PHE SER LEU VAL LEU LEU ILE SEQRES 14 A 302 ILE GLY LEU ILE GLY VAL LEU VAL GLY ALA GLU LEU PHE SEQRES 15 A 302 VAL ASP GLY ALA LYS LYS ILE ALA LEU ALA LEU ASP ILE SEQRES 16 A 302 SER ASP LYS VAL ILE GLY PHE THR LEU VAL ALA PHE GLY SEQRES 17 A 302 THR SER LEU PRO GLU LEU MET VAL SER LEU ALA ALA ALA SEQRES 18 A 302 LYS ARG ASN LEU GLY GLY MET VAL LEU GLY ASN VAL ILE SEQRES 19 A 302 GLY SER ASN ILE ALA ASP ILE GLY GLY ALA LEU ALA VAL SEQRES 20 A 302 GLY SER LEU PHE MET HIS LEU PRO ALA GLU ASN VAL GLN SEQRES 21 A 302 MET ALA VAL LEU VAL ILE MET SER LEU LEU LEU TYR LEU SEQRES 22 A 302 PHE ALA LYS TYR SER LYS ILE GLY ARG TRP GLN GLY ILE SEQRES 23 A 302 LEU PHE LEU ALA LEU TYR ILE ILE ALA ILE ALA SER LEU SEQRES 24 A 302 ARG MET GLY HET NA A 401 1 HET SR A 402 1 HET SR A 403 1 HET OLC A 404 25 HET OLC A 405 9 HET MYS A 406 15 HET MYS A 407 6 HET MYS A 408 12 HET MYS A 409 5 HET MYS A 410 5 HET 1PE A 411 16 HET 1PE A 412 8 HETNAM NA SODIUM ION HETNAM SR STRONTIUM ION HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM MYS PENTADECANE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN 1PE PEG400 FORMUL 2 NA NA 1+ FORMUL 3 SR 2(SR 2+) FORMUL 5 OLC 2(C21 H40 O4) FORMUL 7 MYS 5(C15 H32) FORMUL 12 1PE 2(C10 H22 O6) FORMUL 14 HOH *33(H2 O) HELIX 1 AA1 VAL A 2 ASN A 35 1 34 HELIX 2 AA2 SER A 37 THR A 44 1 8 HELIX 3 AA3 THR A 44 MET A 64 1 21 HELIX 4 AA4 ALA A 66 LEU A 84 1 19 HELIX 5 AA5 LEU A 84 SER A 93 1 10 HELIX 6 AA6 ASP A 98 GLY A 119 1 22 HELIX 7 AA7 SER A 124 GLY A 146 1 23 HELIX 8 AA8 ASN A 158 LEU A 193 1 36 HELIX 9 AA9 ASP A 197 ARG A 223 1 27 HELIX 10 AB1 LEU A 225 GLY A 243 1 19 HELIX 11 AB2 GLY A 243 MET A 252 1 10 HELIX 12 AB3 GLU A 257 SER A 278 1 22 HELIX 13 AB4 GLY A 281 LEU A 299 1 19 LINK O ALA A 47 NA NA A 401 1555 1555 2.50 LINK OG1 THR A 50 NA NA A 401 1555 1555 2.35 LINK O THR A 50 SR SR A 402 1555 1555 2.52 LINK OG SER A 51 NA NA A 401 1555 1555 2.50 LINK OE1 GLU A 54 SR SR A 402 1555 1555 2.46 LINK OE2 GLU A 54 SR SR A 402 1555 1555 2.47 LINK O ILE A 118 SR SR A 403 1555 1555 2.42 LINK OD1 ASP A 121 SR SR A 403 1555 1555 2.53 LINK O GLY A 122 SR SR A 403 1555 1555 2.59 LINK OD2 ASP A 127 SR SR A 403 1555 1555 2.61 LINK O THR A 209 SR SR A 402 1555 1555 2.49 LINK OE2 GLU A 213 NA NA A 401 1555 1555 2.29 LINK OE1 GLU A 213 SR SR A 402 1555 1555 2.33 LINK OE2 GLU A 213 SR SR A 402 1555 1555 2.39 LINK OG SER A 236 NA NA A 401 1555 1555 2.29 LINK SR SR A 402 O HOH A 504 1555 1555 2.82 LINK SR SR A 403 O23 OLC A 404 1555 1555 2.64 LINK SR SR A 403 O25 OLC A 404 1555 1555 2.83 SITE 1 AC1 5 ALA A 47 THR A 50 SER A 51 GLU A 213 SITE 2 AC1 5 SER A 236 SITE 1 AC2 5 THR A 50 GLU A 54 THR A 209 GLU A 213 SITE 2 AC2 5 HOH A 504 SITE 1 AC3 5 ILE A 118 ASP A 121 GLY A 122 ASP A 127 SITE 2 AC3 5 OLC A 404 SITE 1 AC4 9 PHE A 9 PHE A 114 VAL A 117 ILE A 118 SITE 2 AC4 9 ASP A 121 ASP A 127 ILE A 189 SR A 403 SITE 3 AC4 9 HOH A 502 SITE 1 AC5 6 SER A 37 ASN A 38 LEU A 225 GLY A 226 SITE 2 AC5 6 GLY A 227 MET A 228 SITE 1 AC6 5 ILE A 91 ILE A 92 TRP A 125 LEU A 250 SITE 2 AC6 5 ILE A 293 SITE 1 AC7 2 VAL A 107 LEU A 134 SITE 1 AC8 2 LEU A 291 ILE A 294 SITE 1 AC9 1 LEU A 110 SITE 1 AD1 7 TYR A 17 SER A 20 ASP A 21 MET A 215 SITE 2 AD1 7 LEU A 218 ALA A 219 LYS A 222 SITE 1 AD2 5 PRO A 53 LEU A 56 LEU A 176 ALA A 179 SITE 2 AD2 5 GLU A 180 CRYST1 49.670 72.463 96.428 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020133 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013800 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010370 0.00000