HEADER HYDROLASE 17-APR-16 5JDT TITLE STRUCTURE OF SPIN-LABELLED T4 LYSOZYME MUTANT L118C-R1 AT 100K COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOLYSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LYSIS PROTEIN,LYSOZYME,MURAMIDASE; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET28B KEYWDS NITROXIDE, SPIN LABEL, T4 LYSOZYME, ELECTRON PARAMAGNETIC RESONANCE, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.LOLL,P.CONSENTIUS,U.GOHLKE,R.MUELLER,M.KAUPP,U.HEINEMANN,M.C.WAHL, AUTHOR 2 T.RISSE REVDAT 4 03-APR-24 5JDT 1 REMARK SSBOND LINK REVDAT 3 10-JAN-24 5JDT 1 LINK REVDAT 2 26-OCT-16 5JDT 1 JRNL REVDAT 1 28-SEP-16 5JDT 0 JRNL AUTH P.CONSENTIUS,U.GOHLKE,B.LOLL,C.ALINGS,R.MULLER,U.HEINEMANN, JRNL AUTH 2 M.KAUPP,M.WAHL,T.RISSE JRNL TITL TRACKING TRANSIENT CONFORMATIONAL STATES OF T4 LYSOZYME AT JRNL TITL 2 ROOM TEMPERATURE COMBINING X-RAY CRYSTALLOGRAPHY AND JRNL TITL 3 SITE-DIRECTED SPIN LABELING. JRNL REF J.AM.CHEM.SOC. V. 138 12868 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 27673570 JRNL DOI 10.1021/JACS.6B05507 REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 110400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.115 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.130 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 5490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.7659 - 3.1020 1.00 3759 168 0.1342 0.1758 REMARK 3 2 3.1020 - 2.4642 1.00 3612 190 0.1323 0.1432 REMARK 3 3 2.4642 - 2.1533 1.00 3526 185 0.1190 0.1243 REMARK 3 4 2.1533 - 1.9567 1.00 3574 188 0.1128 0.1362 REMARK 3 5 1.9567 - 1.8166 1.00 3519 185 0.1170 0.1310 REMARK 3 6 1.8166 - 1.7096 1.00 3524 186 0.1096 0.1253 REMARK 3 7 1.7096 - 1.6241 1.00 3507 184 0.0993 0.1014 REMARK 3 8 1.6241 - 1.5534 1.00 3515 185 0.0920 0.1128 REMARK 3 9 1.5534 - 1.4936 1.00 3483 183 0.0887 0.0999 REMARK 3 10 1.4936 - 1.4421 1.00 3509 185 0.0898 0.0966 REMARK 3 11 1.4421 - 1.3970 1.00 3488 183 0.0934 0.1086 REMARK 3 12 1.3970 - 1.3571 1.00 3488 183 0.0921 0.1106 REMARK 3 13 1.3571 - 1.3214 1.00 3493 184 0.0914 0.1028 REMARK 3 14 1.3214 - 1.2892 1.00 3470 183 0.0951 0.1030 REMARK 3 15 1.2892 - 1.2599 1.00 3481 183 0.0904 0.1042 REMARK 3 16 1.2599 - 1.2331 1.00 3474 183 0.0939 0.1088 REMARK 3 17 1.2331 - 1.2084 1.00 3455 181 0.0928 0.1038 REMARK 3 18 1.2084 - 1.1856 1.00 3489 184 0.0932 0.1057 REMARK 3 19 1.1856 - 1.1644 1.00 3461 183 0.0920 0.1068 REMARK 3 20 1.1644 - 1.1447 1.00 3478 183 0.0958 0.1082 REMARK 3 21 1.1447 - 1.1262 1.00 3479 183 0.1000 0.1231 REMARK 3 22 1.1262 - 1.1089 1.00 3443 181 0.1080 0.1079 REMARK 3 23 1.1089 - 1.0926 1.00 3460 182 0.1106 0.1177 REMARK 3 24 1.0926 - 1.0772 1.00 3423 180 0.1196 0.1239 REMARK 3 25 1.0772 - 1.0627 1.00 3513 185 0.1260 0.1298 REMARK 3 26 1.0627 - 1.0489 1.00 3440 181 0.1353 0.1517 REMARK 3 27 1.0489 - 1.0358 1.00 3461 183 0.1425 0.1600 REMARK 3 28 1.0358 - 1.0233 1.00 3422 180 0.1566 0.1688 REMARK 3 29 1.0233 - 1.0114 1.00 3485 183 0.1648 0.1742 REMARK 3 30 1.0114 - 1.0000 1.00 3479 183 0.1777 0.2011 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.050 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 9.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 1722 REMARK 3 ANGLE : 1.470 2353 REMARK 3 CHIRALITY : 0.092 244 REMARK 3 PLANARITY : 0.013 315 REMARK 3 DIHEDRAL : 14.894 737 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.895 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110425 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2NTH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M NA/K PHOSPHATE, 240 MM NACL, 40 REMARK 280 MM 2-HYDROXYETHYL DISULFIDE, PH 6.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.64667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.32333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.32333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.64667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 8 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG A 119 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 29 74.38 -105.31 REMARK 500 ASN A 163 -14.56 98.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR A 161 -15.83 REMARK 500 TYR A 161 14.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 597 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 598 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 599 DISTANCE = 7.90 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 208 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 O REMARK 620 2 GLU A 11 OE1 84.7 REMARK 620 3 TYR A 18 OH 85.9 119.9 REMARK 620 4 HOH A 348 O 83.2 77.7 158.4 REMARK 620 5 HOH A 379 O 129.2 55.8 87.9 113.4 REMARK 620 6 HOH A 484 O 158.9 84.7 115.1 76.7 56.1 REMARK 620 7 HOH A 486 O 60.6 145.3 61.7 96.6 148.7 127.9 REMARK 620 8 HOH A 532 O 127.8 130.2 101.2 71.5 102.9 51.0 77.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MTN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZI A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZI A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 208 DBREF 5JDT A 1 164 UNP P00720 ENLYS_BPT4 1 164 SEQADV 5JDT GLY A 12 UNP P00720 ARG 12 CONFLICT SEQADV 5JDT THR A 54 UNP P00720 CYS 54 ENGINEERED MUTATION SEQADV 5JDT ALA A 97 UNP P00720 CYS 97 ENGINEERED MUTATION SEQADV 5JDT CYS A 118 UNP P00720 LEU 118 ENGINEERED MUTATION SEQADV 5JDT ARG A 137 UNP P00720 ILE 137 CONFLICT SEQRES 1 A 164 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 A 164 ARG LEU LYS ILE TYR LYS ASP THR GLU GLY TYR TYR THR SEQRES 3 A 164 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO SER LEU SEQRES 4 A 164 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE GLY ARG SEQRES 5 A 164 ASN THR ASN GLY VAL ILE THR LYS ASP GLU ALA GLU LYS SEQRES 6 A 164 LEU PHE ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE SEQRES 7 A 164 LEU ARG ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU SEQRES 8 A 164 ASP ALA VAL ARG ARG ALA ALA LEU ILE ASN MET VAL PHE SEQRES 9 A 164 GLN MET GLY GLU THR GLY VAL ALA GLY PHE THR ASN SER SEQRES 10 A 164 CYS ARG MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA SEQRES 11 A 164 VAL ASN LEU ALA LYS SER ARG TRP TYR ASN GLN THR PRO SEQRES 12 A 164 ASN ARG ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY SEQRES 13 A 164 THR TRP ASP ALA TYR LYS ASN LEU HET MTN A 201 54 HET CL A 202 1 HET CL A 203 1 HET CL A 204 1 HET BME A 205 20 HET AZI A 206 3 HET AZI A 207 3 HET K A 208 1 HETNAM MTN S-[(1-OXYL-2,2,5,5-TETRAMETHYL-2,5-DIHYDRO-1H-PYRROL-3- HETNAM 2 MTN YL)METHYL] METHANESULFONOTHIOATE HETNAM CL CHLORIDE ION HETNAM BME BETA-MERCAPTOETHANOL HETNAM AZI AZIDE ION HETNAM K POTASSIUM ION HETSYN MTN MTSL FORMUL 2 MTN C10 H18 N O3 S2 FORMUL 3 CL 3(CL 1-) FORMUL 6 BME C2 H6 O S FORMUL 7 AZI 2(N3 1-) FORMUL 9 K K 1+ FORMUL 10 HOH *299(H2 O) HELIX 1 AA1 ASN A 2 GLY A 12 1 11 HELIX 2 AA2 SER A 38 GLY A 51 1 14 HELIX 3 AA3 THR A 59 ARG A 80 1 22 HELIX 4 AA4 LEU A 84 LEU A 91 1 8 HELIX 5 AA5 ASP A 92 GLY A 107 1 16 HELIX 6 AA6 PHE A 114 GLN A 123 1 10 HELIX 7 AA7 ARG A 125 ALA A 134 1 10 HELIX 8 AA8 SER A 136 THR A 142 1 7 HELIX 9 AA9 THR A 142 GLY A 156 1 15 HELIX 10 AB1 TRP A 158 LYS A 162 5 5 SHEET 1 AA1 3 ARG A 14 LYS A 19 0 SHEET 2 AA1 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 AA1 3 HIS A 31 LEU A 32 -1 O HIS A 31 N ILE A 27 LINK SG ACYS A 118 S1 AMTN A 201 1555 1555 2.03 LINK SG BCYS A 118 S1 BMTN A 201 1555 1555 2.06 LINK O GLU A 11 K A K A 208 1555 1555 2.86 LINK OE1 GLU A 11 K A K A 208 1555 1555 3.06 LINK OH ATYR A 18 K A K A 208 1555 1555 2.74 LINK K A K A 208 O HOH A 348 1555 1555 2.77 LINK K A K A 208 O HOH A 379 1555 1555 2.82 LINK K A K A 208 O AHOH A 484 1555 1555 3.36 LINK K A K A 208 O AHOH A 486 1555 1555 3.18 LINK K A K A 208 O HOH A 532 1555 1555 2.80 SITE 1 AC1 9 LYS A 83 LEU A 99 VAL A 111 GLY A 113 SITE 2 AC1 9 PHE A 114 CYS A 118 HOH A 328 HOH A 492 SITE 3 AC1 9 HOH A 506 SITE 1 AC2 5 SER A 44 LYS A 48 PHE A 114 THR A 115 SITE 2 AC2 5 ASN A 116 SITE 1 AC3 5 LYS A 124 THR A 142 ASN A 144 ARG A 145 SITE 2 AC3 5 HOH A 474 SITE 1 AC4 4 ASN A 132 LYS A 135 HOH A 402 HOH A 551 SITE 1 AC5 5 ASN A 68 ASP A 72 HOH A 315 HOH A 499 SITE 2 AC5 5 HOH A 502 SITE 1 AC6 4 ASN A 144 ARG A 148 HOH A 508 HOH A 545 SITE 1 AC7 8 LYS A 19 ARG A 125 TRP A 126 ASP A 127 SITE 2 AC7 8 GLU A 128 HOH A 302 HOH A 306 HOH A 434 SITE 1 AC8 6 GLU A 11 TYR A 18 HOH A 348 HOH A 379 SITE 2 AC8 6 HOH A 381 HOH A 532 CRYST1 60.280 60.280 96.970 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016589 0.009578 0.000000 0.00000 SCALE2 0.000000 0.019156 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010312 0.00000