data_5JED # _entry.id 5JED # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JED pdb_00005jed 10.2210/pdb5jed/pdb WWPDB D_1000220445 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-19 2 'Structure model' 1 1 2016-11-30 3 'Structure model' 1 2 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JED _pdbx_database_status.recvd_initial_deposition_date 2016-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fischer, G.' 1 'Marsh, M.' 2 'Moschetti, T.' 3 'Sharpe, T.' 4 'Scott, D.' 5 'Morgan, M.' 6 'Ng, H.' 7 'Skidmore, J.' 8 'Venkitaraman, A.' 9 'Abell, C.' 10 'Blundell, T.L.' 11 'Hyvonen, M.' 12 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Mol.Biol. _citation.journal_id_ASTM JMOBAK _citation.journal_id_CSD 0070 _citation.journal_id_ISSN 1089-8638 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 428 _citation.language ? _citation.page_first 4589 _citation.page_last 4607 _citation.title 'Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jmb.2016.10.009 _citation.pdbx_database_id_PubMed 27725183 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moschetti, T.' 1 ? primary 'Sharpe, T.' 2 ? primary 'Fischer, G.' 3 ? primary 'Marsh, M.E.' 4 ? primary 'Ng, H.K.' 5 ? primary 'Morgan, M.' 6 ? primary 'Scott, D.E.' 7 ? primary 'Blundell, T.L.' 8 ? primary 'R Venkitaraman, A.' 9 ? primary 'Skidmore, J.' 10 ? primary 'Abell, C.' 11 ? primary 'Hyvonen, M.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA repair and recombination protein RadA' 25628.178 1 ? ;S167K, V168A, I169M, W170Y, I182L, K198D, H199N, I200V, Y201A, V202Y, L213Q, V215L, Q216Y, E219S, K221M, I222M, K223V, L225S, V232Y, K263R, H264F, A266R, D267M, L274E, Y275F ; ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 201 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGKAMYIDTENTFRPERLREIA QNRGLDPDEVLDNVAYARAFNSNHQMQLLYQASDMMVESLNTDRPYKLLIVDSLTSHFRSEYIGRGALAERQQKLARFLR MLHRLANEFDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_seq_one_letter_code_can ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGKAMYIDTENTFRPERLREIA QNRGLDPDEVLDNVAYARAFNSNHQMQLLYQASDMMVESLNTDRPYKLLIVDSLTSHFRSEYIGRGALAERQQKLARFLR MLHRLANEFDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 ILE n 1 5 GLY n 1 6 ARG n 1 7 ILE n 1 8 SER n 1 9 THR n 1 10 GLY n 1 11 SER n 1 12 LYS n 1 13 SER n 1 14 LEU n 1 15 ASP n 1 16 LYS n 1 17 LEU n 1 18 LEU n 1 19 GLY n 1 20 GLY n 1 21 GLY n 1 22 ILE n 1 23 GLU n 1 24 THR n 1 25 GLN n 1 26 ALA n 1 27 ILE n 1 28 THR n 1 29 GLU n 1 30 VAL n 1 31 PHE n 1 32 GLY n 1 33 GLU n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 GLY n 1 38 LYS n 1 39 THR n 1 40 GLN n 1 41 LEU n 1 42 ALA n 1 43 HIS n 1 44 THR n 1 45 LEU n 1 46 ALA n 1 47 VAL n 1 48 MET n 1 49 VAL n 1 50 GLN n 1 51 LEU n 1 52 PRO n 1 53 PRO n 1 54 GLU n 1 55 GLU n 1 56 GLY n 1 57 GLY n 1 58 LEU n 1 59 ASN n 1 60 GLY n 1 61 LYS n 1 62 ALA n 1 63 MET n 1 64 TYR n 1 65 ILE n 1 66 ASP n 1 67 THR n 1 68 GLU n 1 69 ASN n 1 70 THR n 1 71 PHE n 1 72 ARG n 1 73 PRO n 1 74 GLU n 1 75 ARG n 1 76 LEU n 1 77 ARG n 1 78 GLU n 1 79 ILE n 1 80 ALA n 1 81 GLN n 1 82 ASN n 1 83 ARG n 1 84 GLY n 1 85 LEU n 1 86 ASP n 1 87 PRO n 1 88 ASP n 1 89 GLU n 1 90 VAL n 1 91 LEU n 1 92 ASP n 1 93 ASN n 1 94 VAL n 1 95 ALA n 1 96 TYR n 1 97 ALA n 1 98 ARG n 1 99 ALA n 1 100 PHE n 1 101 ASN n 1 102 SER n 1 103 ASN n 1 104 HIS n 1 105 GLN n 1 106 MET n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 TYR n 1 111 GLN n 1 112 ALA n 1 113 SER n 1 114 ASP n 1 115 MET n 1 116 MET n 1 117 VAL n 1 118 GLU n 1 119 SER n 1 120 LEU n 1 121 ASN n 1 122 THR n 1 123 ASP n 1 124 ARG n 1 125 PRO n 1 126 TYR n 1 127 LYS n 1 128 LEU n 1 129 LEU n 1 130 ILE n 1 131 VAL n 1 132 ASP n 1 133 SER n 1 134 LEU n 1 135 THR n 1 136 SER n 1 137 HIS n 1 138 PHE n 1 139 ARG n 1 140 SER n 1 141 GLU n 1 142 TYR n 1 143 ILE n 1 144 GLY n 1 145 ARG n 1 146 GLY n 1 147 ALA n 1 148 LEU n 1 149 ALA n 1 150 GLU n 1 151 ARG n 1 152 GLN n 1 153 GLN n 1 154 LYS n 1 155 LEU n 1 156 ALA n 1 157 ARG n 1 158 PHE n 1 159 LEU n 1 160 ARG n 1 161 MET n 1 162 LEU n 1 163 HIS n 1 164 ARG n 1 165 LEU n 1 166 ALA n 1 167 ASN n 1 168 GLU n 1 169 PHE n 1 170 ASP n 1 171 ILE n 1 172 ALA n 1 173 VAL n 1 174 PHE n 1 175 VAL n 1 176 THR n 1 177 ASN n 1 178 GLN n 1 179 VAL n 1 180 GLN n 1 181 ALA n 1 182 ASN n 1 183 GLY n 1 184 GLY n 1 185 HIS n 1 186 ILE n 1 187 LEU n 1 188 ALA n 1 189 HIS n 1 190 SER n 1 191 ALA n 1 192 THR n 1 193 LEU n 1 194 ARG n 1 195 VAL n 1 196 TYR n 1 197 LEU n 1 198 ARG n 1 199 LYS n 1 200 GLY n 1 201 LYS n 1 202 GLY n 1 203 GLY n 1 204 LYS n 1 205 ARG n 1 206 ILE n 1 207 ALA n 1 208 ARG n 1 209 LEU n 1 210 ILE n 1 211 ASP n 1 212 ALA n 1 213 PRO n 1 214 HIS n 1 215 LEU n 1 216 PRO n 1 217 GLU n 1 218 GLY n 1 219 GLU n 1 220 ALA n 1 221 VAL n 1 222 PHE n 1 223 SER n 1 224 ILE n 1 225 THR n 1 226 GLU n 1 227 LYS n 1 228 GLY n 1 229 ILE n 1 230 GLU n 1 231 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 231 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'radA, PF1926' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 43587 / DSM 3638 / JCM 8422 / Vc1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBAT4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 107 ? ? ? A . n A 1 2 ALA 2 108 108 ALA ALA A . n A 1 3 THR 3 109 109 THR THR A . n A 1 4 ILE 4 110 110 ILE ILE A . n A 1 5 GLY 5 111 111 GLY GLY A . n A 1 6 ARG 6 112 112 ARG ARG A . n A 1 7 ILE 7 113 113 ILE ILE A . n A 1 8 SER 8 114 114 SER SER A . n A 1 9 THR 9 115 115 THR THR A . n A 1 10 GLY 10 116 116 GLY GLY A . n A 1 11 SER 11 117 117 SER SER A . n A 1 12 LYS 12 118 118 LYS LYS A . n A 1 13 SER 13 119 119 SER SER A . n A 1 14 LEU 14 120 120 LEU LEU A . n A 1 15 ASP 15 121 121 ASP ASP A . n A 1 16 LYS 16 122 122 LYS LYS A . n A 1 17 LEU 17 123 123 LEU LEU A . n A 1 18 LEU 18 124 124 LEU LEU A . n A 1 19 GLY 19 125 125 GLY GLY A . n A 1 20 GLY 20 126 126 GLY GLY A . n A 1 21 GLY 21 127 127 GLY GLY A . n A 1 22 ILE 22 128 128 ILE ILE A . n A 1 23 GLU 23 129 129 GLU GLU A . n A 1 24 THR 24 130 130 THR THR A . n A 1 25 GLN 25 131 131 GLN GLN A . n A 1 26 ALA 26 132 132 ALA ALA A . n A 1 27 ILE 27 133 133 ILE ILE A . n A 1 28 THR 28 134 134 THR THR A . n A 1 29 GLU 29 135 135 GLU GLU A . n A 1 30 VAL 30 136 136 VAL VAL A . n A 1 31 PHE 31 137 137 PHE PHE A . n A 1 32 GLY 32 138 138 GLY GLY A . n A 1 33 GLU 33 139 139 GLU GLU A . n A 1 34 PHE 34 140 140 PHE PHE A . n A 1 35 GLY 35 141 141 GLY GLY A . n A 1 36 SER 36 142 142 SER SER A . n A 1 37 GLY 37 143 143 GLY GLY A . n A 1 38 LYS 38 144 144 LYS LYS A . n A 1 39 THR 39 145 145 THR THR A . n A 1 40 GLN 40 146 146 GLN GLN A . n A 1 41 LEU 41 147 147 LEU LEU A . n A 1 42 ALA 42 148 148 ALA ALA A . n A 1 43 HIS 43 149 149 HIS HIS A . n A 1 44 THR 44 150 150 THR THR A . n A 1 45 LEU 45 151 151 LEU LEU A . n A 1 46 ALA 46 152 152 ALA ALA A . n A 1 47 VAL 47 153 153 VAL VAL A . n A 1 48 MET 48 154 154 MET MET A . n A 1 49 VAL 49 155 155 VAL VAL A . n A 1 50 GLN 50 156 156 GLN GLN A . n A 1 51 LEU 51 157 157 LEU LEU A . n A 1 52 PRO 52 158 158 PRO PRO A . n A 1 53 PRO 53 159 159 PRO PRO A . n A 1 54 GLU 54 160 160 GLU GLU A . n A 1 55 GLU 55 161 161 GLU GLU A . n A 1 56 GLY 56 162 162 GLY GLY A . n A 1 57 GLY 57 163 163 GLY GLY A . n A 1 58 LEU 58 164 164 LEU LEU A . n A 1 59 ASN 59 165 165 ASN ASN A . n A 1 60 GLY 60 166 166 GLY GLY A . n A 1 61 LYS 61 167 167 LYS LYS A . n A 1 62 ALA 62 168 168 ALA ALA A . n A 1 63 MET 63 169 169 MET MET A . n A 1 64 TYR 64 170 170 TYR TYR A . n A 1 65 ILE 65 171 171 ILE ILE A . n A 1 66 ASP 66 172 172 ASP ASP A . n A 1 67 THR 67 173 173 THR THR A . n A 1 68 GLU 68 174 174 GLU GLU A . n A 1 69 ASN 69 175 175 ASN ASN A . n A 1 70 THR 70 176 176 THR THR A . n A 1 71 PHE 71 177 177 PHE PHE A . n A 1 72 ARG 72 178 178 ARG ARG A . n A 1 73 PRO 73 179 179 PRO PRO A . n A 1 74 GLU 74 180 180 GLU GLU A . n A 1 75 ARG 75 181 181 ARG ARG A . n A 1 76 LEU 76 182 182 LEU LEU A . n A 1 77 ARG 77 183 183 ARG ARG A . n A 1 78 GLU 78 184 184 GLU GLU A . n A 1 79 ILE 79 185 185 ILE ILE A . n A 1 80 ALA 80 186 186 ALA ALA A . n A 1 81 GLN 81 187 187 GLN GLN A . n A 1 82 ASN 82 188 188 ASN ASN A . n A 1 83 ARG 83 189 189 ARG ARG A . n A 1 84 GLY 84 190 190 GLY GLY A . n A 1 85 LEU 85 191 191 LEU LEU A . n A 1 86 ASP 86 192 192 ASP ASP A . n A 1 87 PRO 87 193 193 PRO PRO A . n A 1 88 ASP 88 194 194 ASP ASP A . n A 1 89 GLU 89 195 195 GLU GLU A . n A 1 90 VAL 90 196 196 VAL VAL A . n A 1 91 LEU 91 197 197 LEU LEU A . n A 1 92 ASP 92 198 198 ASP ASP A . n A 1 93 ASN 93 199 199 ASN ASN A . n A 1 94 VAL 94 200 200 VAL VAL A . n A 1 95 ALA 95 201 201 ALA ALA A . n A 1 96 TYR 96 202 202 TYR TYR A . n A 1 97 ALA 97 203 203 ALA ALA A . n A 1 98 ARG 98 204 204 ARG ARG A . n A 1 99 ALA 99 205 205 ALA ALA A . n A 1 100 PHE 100 206 206 PHE PHE A . n A 1 101 ASN 101 207 207 ASN ASN A . n A 1 102 SER 102 208 208 SER SER A . n A 1 103 ASN 103 209 209 ASN ASN A . n A 1 104 HIS 104 210 210 HIS HIS A . n A 1 105 GLN 105 211 211 GLN GLN A . n A 1 106 MET 106 212 212 MET MET A . n A 1 107 GLN 107 213 213 GLN GLN A . n A 1 108 LEU 108 214 214 LEU LEU A . n A 1 109 LEU 109 215 215 LEU LEU A . n A 1 110 TYR 110 216 216 TYR TYR A . n A 1 111 GLN 111 217 217 GLN GLN A . n A 1 112 ALA 112 218 218 ALA ALA A . n A 1 113 SER 113 219 219 SER SER A . n A 1 114 ASP 114 220 220 ASP ASP A . n A 1 115 MET 115 221 221 MET MET A . n A 1 116 MET 116 222 222 MET MET A . n A 1 117 VAL 117 223 223 VAL VAL A . n A 1 118 GLU 118 224 224 GLU GLU A . n A 1 119 SER 119 225 225 SER SER A . n A 1 120 LEU 120 226 226 LEU LEU A . n A 1 121 ASN 121 227 227 ASN ASN A . n A 1 122 THR 122 228 228 THR THR A . n A 1 123 ASP 123 229 229 ASP ASP A . n A 1 124 ARG 124 230 230 ARG ARG A . n A 1 125 PRO 125 231 231 PRO PRO A . n A 1 126 TYR 126 232 232 TYR TYR A . n A 1 127 LYS 127 233 233 LYS LYS A . n A 1 128 LEU 128 234 234 LEU LEU A . n A 1 129 LEU 129 235 235 LEU LEU A . n A 1 130 ILE 130 236 236 ILE ILE A . n A 1 131 VAL 131 237 237 VAL VAL A . n A 1 132 ASP 132 238 238 ASP ASP A . n A 1 133 SER 133 239 239 SER SER A . n A 1 134 LEU 134 240 240 LEU LEU A . n A 1 135 THR 135 241 241 THR THR A . n A 1 136 SER 136 242 242 SER SER A . n A 1 137 HIS 137 243 243 HIS HIS A . n A 1 138 PHE 138 244 244 PHE PHE A . n A 1 139 ARG 139 245 245 ARG ARG A . n A 1 140 SER 140 246 246 SER SER A . n A 1 141 GLU 141 247 247 GLU GLU A . n A 1 142 TYR 142 248 248 TYR TYR A . n A 1 143 ILE 143 249 249 ILE ILE A . n A 1 144 GLY 144 250 250 GLY GLY A . n A 1 145 ARG 145 251 251 ARG ARG A . n A 1 146 GLY 146 252 252 GLY GLY A . n A 1 147 ALA 147 253 253 ALA ALA A . n A 1 148 LEU 148 254 254 LEU LEU A . n A 1 149 ALA 149 255 255 ALA ALA A . n A 1 150 GLU 150 256 256 GLU GLU A . n A 1 151 ARG 151 257 257 ARG ARG A . n A 1 152 GLN 152 258 258 GLN GLN A . n A 1 153 GLN 153 259 259 GLN GLN A . n A 1 154 LYS 154 260 260 LYS LYS A . n A 1 155 LEU 155 261 261 LEU LEU A . n A 1 156 ALA 156 262 262 ALA ALA A . n A 1 157 ARG 157 263 263 ARG ARG A . n A 1 158 PHE 158 264 264 PHE PHE A . n A 1 159 LEU 159 265 265 LEU LEU A . n A 1 160 ARG 160 266 266 ARG ARG A . n A 1 161 MET 161 267 267 MET MET A . n A 1 162 LEU 162 268 268 LEU LEU A . n A 1 163 HIS 163 269 269 HIS HIS A . n A 1 164 ARG 164 270 270 ARG ARG A . n A 1 165 LEU 165 271 271 LEU LEU A . n A 1 166 ALA 166 272 272 ALA ALA A . n A 1 167 ASN 167 273 273 ASN ASN A . n A 1 168 GLU 168 274 274 GLU GLU A . n A 1 169 PHE 169 275 275 PHE PHE A . n A 1 170 ASP 170 276 276 ASP ASP A . n A 1 171 ILE 171 277 277 ILE ILE A . n A 1 172 ALA 172 278 278 ALA ALA A . n A 1 173 VAL 173 279 279 VAL VAL A . n A 1 174 PHE 174 280 280 PHE PHE A . n A 1 175 VAL 175 281 281 VAL VAL A . n A 1 176 THR 176 282 282 THR THR A . n A 1 177 ASN 177 283 283 ASN ASN A . n A 1 178 GLN 178 284 284 GLN GLN A . n A 1 179 VAL 179 285 285 VAL VAL A . n A 1 180 GLN 180 286 286 GLN GLN A . n A 1 181 ALA 181 287 287 ALA ALA A . n A 1 182 ASN 182 288 288 ASN ASN A . n A 1 183 GLY 183 289 289 GLY GLY A . n A 1 184 GLY 184 290 290 GLY GLY A . n A 1 185 HIS 185 291 291 HIS HIS A . n A 1 186 ILE 186 292 292 ILE ILE A . n A 1 187 LEU 187 293 293 LEU LEU A . n A 1 188 ALA 188 294 294 ALA ALA A . n A 1 189 HIS 189 295 295 HIS HIS A . n A 1 190 SER 190 296 296 SER SER A . n A 1 191 ALA 191 297 297 ALA ALA A . n A 1 192 THR 192 310 310 THR THR A . n A 1 193 LEU 193 311 311 LEU LEU A . n A 1 194 ARG 194 312 312 ARG ARG A . n A 1 195 VAL 195 313 313 VAL VAL A . n A 1 196 TYR 196 314 314 TYR TYR A . n A 1 197 LEU 197 315 315 LEU LEU A . n A 1 198 ARG 198 316 316 ARG ARG A . n A 1 199 LYS 199 317 317 LYS LYS A . n A 1 200 GLY 200 318 318 GLY GLY A . n A 1 201 LYS 201 319 319 LYS LYS A . n A 1 202 GLY 202 320 320 GLY GLY A . n A 1 203 GLY 203 321 321 GLY GLY A . n A 1 204 LYS 204 322 322 LYS LYS A . n A 1 205 ARG 205 323 323 ARG ARG A . n A 1 206 ILE 206 324 324 ILE ILE A . n A 1 207 ALA 207 325 325 ALA ALA A . n A 1 208 ARG 208 326 326 ARG ARG A . n A 1 209 LEU 209 327 327 LEU LEU A . n A 1 210 ILE 210 328 328 ILE ILE A . n A 1 211 ASP 211 329 329 ASP ASP A . n A 1 212 ALA 212 330 330 ALA ALA A . n A 1 213 PRO 213 331 331 PRO PRO A . n A 1 214 HIS 214 332 332 HIS HIS A . n A 1 215 LEU 215 333 333 LEU LEU A . n A 1 216 PRO 216 334 334 PRO PRO A . n A 1 217 GLU 217 335 335 GLU GLU A . n A 1 218 GLY 218 336 336 GLY GLY A . n A 1 219 GLU 219 337 337 GLU GLU A . n A 1 220 ALA 220 338 338 ALA ALA A . n A 1 221 VAL 221 339 339 VAL VAL A . n A 1 222 PHE 222 340 340 PHE PHE A . n A 1 223 SER 223 341 341 SER SER A . n A 1 224 ILE 224 342 342 ILE ILE A . n A 1 225 THR 225 343 343 THR THR A . n A 1 226 GLU 226 344 344 GLU GLU A . n A 1 227 LYS 227 345 345 LYS LYS A . n A 1 228 GLY 228 346 346 GLY GLY A . n A 1 229 ILE 229 347 347 ILE ILE A . n A 1 230 GLU 230 348 348 GLU GLU A . n A 1 231 ASP 231 349 349 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 1 SO4 SO4 A . C 3 MPD 1 402 1 MPD MPD A . D 4 MRD 1 403 2 MRD MPD A . E 5 CL 1 404 1 CL CL A . F 6 HOH 1 501 148 HOH HOH A . F 6 HOH 2 502 216 HOH HOH A . F 6 HOH 3 503 157 HOH HOH A . F 6 HOH 4 504 141 HOH HOH A . F 6 HOH 5 505 155 HOH HOH A . F 6 HOH 6 506 164 HOH HOH A . F 6 HOH 7 507 117 HOH HOH A . F 6 HOH 8 508 130 HOH HOH A . F 6 HOH 9 509 93 HOH HOH A . F 6 HOH 10 510 36 HOH HOH A . F 6 HOH 11 511 67 HOH HOH A . F 6 HOH 12 512 77 HOH HOH A . F 6 HOH 13 513 145 HOH HOH A . F 6 HOH 14 514 142 HOH HOH A . F 6 HOH 15 515 134 HOH HOH A . F 6 HOH 16 516 91 HOH HOH A . F 6 HOH 17 517 45 HOH HOH A . F 6 HOH 18 518 30 HOH HOH A . F 6 HOH 19 519 127 HOH HOH A . F 6 HOH 20 520 86 HOH HOH A . F 6 HOH 21 521 35 HOH HOH A . F 6 HOH 22 522 208 HOH HOH A . F 6 HOH 23 523 60 HOH HOH A . F 6 HOH 24 524 135 HOH HOH A . F 6 HOH 25 525 162 HOH HOH A . F 6 HOH 26 526 132 HOH HOH A . F 6 HOH 27 527 110 HOH HOH A . F 6 HOH 28 528 71 HOH HOH A . F 6 HOH 29 529 75 HOH HOH A . F 6 HOH 30 530 5 HOH HOH A . F 6 HOH 31 531 38 HOH HOH A . F 6 HOH 32 532 73 HOH HOH A . F 6 HOH 33 533 106 HOH HOH A . F 6 HOH 34 534 44 HOH HOH A . F 6 HOH 35 535 121 HOH HOH A . F 6 HOH 36 536 180 HOH HOH A . F 6 HOH 37 537 187 HOH HOH A . F 6 HOH 38 538 19 HOH HOH A . F 6 HOH 39 539 113 HOH HOH A . F 6 HOH 40 540 1 HOH HOH A . F 6 HOH 41 541 11 HOH HOH A . F 6 HOH 42 542 39 HOH HOH A . F 6 HOH 43 543 128 HOH HOH A . F 6 HOH 44 544 22 HOH HOH A . F 6 HOH 45 545 125 HOH HOH A . F 6 HOH 46 546 146 HOH HOH A . F 6 HOH 47 547 173 HOH HOH A . F 6 HOH 48 548 25 HOH HOH A . F 6 HOH 49 549 3 HOH HOH A . F 6 HOH 50 550 58 HOH HOH A . F 6 HOH 51 551 197 HOH HOH A . F 6 HOH 52 552 17 HOH HOH A . F 6 HOH 53 553 100 HOH HOH A . F 6 HOH 54 554 23 HOH HOH A . F 6 HOH 55 555 6 HOH HOH A . F 6 HOH 56 556 33 HOH HOH A . F 6 HOH 57 557 95 HOH HOH A . F 6 HOH 58 558 112 HOH HOH A . F 6 HOH 59 559 32 HOH HOH A . F 6 HOH 60 560 9 HOH HOH A . F 6 HOH 61 561 105 HOH HOH A . F 6 HOH 62 562 26 HOH HOH A . F 6 HOH 63 563 200 HOH HOH A . F 6 HOH 64 564 196 HOH HOH A . F 6 HOH 65 565 27 HOH HOH A . F 6 HOH 66 566 202 HOH HOH A . F 6 HOH 67 567 194 HOH HOH A . F 6 HOH 68 568 131 HOH HOH A . F 6 HOH 69 569 123 HOH HOH A . F 6 HOH 70 570 150 HOH HOH A . F 6 HOH 71 571 49 HOH HOH A . F 6 HOH 72 572 151 HOH HOH A . F 6 HOH 73 573 20 HOH HOH A . F 6 HOH 74 574 138 HOH HOH A . F 6 HOH 75 575 119 HOH HOH A . F 6 HOH 76 576 15 HOH HOH A . F 6 HOH 77 577 4 HOH HOH A . F 6 HOH 78 578 47 HOH HOH A . F 6 HOH 79 579 7 HOH HOH A . F 6 HOH 80 580 209 HOH HOH A . F 6 HOH 81 581 160 HOH HOH A . F 6 HOH 82 582 81 HOH HOH A . F 6 HOH 83 583 69 HOH HOH A . F 6 HOH 84 584 96 HOH HOH A . F 6 HOH 85 585 63 HOH HOH A . F 6 HOH 86 586 18 HOH HOH A . F 6 HOH 87 587 74 HOH HOH A . F 6 HOH 88 588 21 HOH HOH A . F 6 HOH 89 589 143 HOH HOH A . F 6 HOH 90 590 40 HOH HOH A . F 6 HOH 91 591 10 HOH HOH A . F 6 HOH 92 592 43 HOH HOH A . F 6 HOH 93 593 14 HOH HOH A . F 6 HOH 94 594 55 HOH HOH A . F 6 HOH 95 595 198 HOH HOH A . F 6 HOH 96 596 16 HOH HOH A . F 6 HOH 97 597 8 HOH HOH A . F 6 HOH 98 598 92 HOH HOH A . F 6 HOH 99 599 137 HOH HOH A . F 6 HOH 100 600 82 HOH HOH A . F 6 HOH 101 601 118 HOH HOH A . F 6 HOH 102 602 111 HOH HOH A . F 6 HOH 103 603 76 HOH HOH A . F 6 HOH 104 604 84 HOH HOH A . F 6 HOH 105 605 31 HOH HOH A . F 6 HOH 106 606 59 HOH HOH A . F 6 HOH 107 607 24 HOH HOH A . F 6 HOH 108 608 29 HOH HOH A . F 6 HOH 109 609 98 HOH HOH A . F 6 HOH 110 610 124 HOH HOH A . F 6 HOH 111 611 206 HOH HOH A . F 6 HOH 112 612 195 HOH HOH A . F 6 HOH 113 613 28 HOH HOH A . F 6 HOH 114 614 163 HOH HOH A . F 6 HOH 115 615 120 HOH HOH A . F 6 HOH 116 616 213 HOH HOH A . F 6 HOH 117 617 68 HOH HOH A . F 6 HOH 118 618 12 HOH HOH A . F 6 HOH 119 619 144 HOH HOH A . F 6 HOH 120 620 79 HOH HOH A . F 6 HOH 121 621 184 HOH HOH A . F 6 HOH 122 622 204 HOH HOH A . F 6 HOH 123 623 210 HOH HOH A . F 6 HOH 124 624 13 HOH HOH A . F 6 HOH 125 625 41 HOH HOH A . F 6 HOH 126 626 90 HOH HOH A . F 6 HOH 127 627 34 HOH HOH A . F 6 HOH 128 628 48 HOH HOH A . F 6 HOH 129 629 205 HOH HOH A . F 6 HOH 130 630 178 HOH HOH A . F 6 HOH 131 631 37 HOH HOH A . F 6 HOH 132 632 182 HOH HOH A . F 6 HOH 133 633 53 HOH HOH A . F 6 HOH 134 634 133 HOH HOH A . F 6 HOH 135 635 78 HOH HOH A . F 6 HOH 136 636 140 HOH HOH A . F 6 HOH 137 637 54 HOH HOH A . F 6 HOH 138 638 190 HOH HOH A . F 6 HOH 139 639 186 HOH HOH A . F 6 HOH 140 640 42 HOH HOH A . F 6 HOH 141 641 51 HOH HOH A . F 6 HOH 142 642 136 HOH HOH A . F 6 HOH 143 643 88 HOH HOH A . F 6 HOH 144 644 149 HOH HOH A . F 6 HOH 145 645 185 HOH HOH A . F 6 HOH 146 646 99 HOH HOH A . F 6 HOH 147 647 217 HOH HOH A . F 6 HOH 148 648 104 HOH HOH A . F 6 HOH 149 649 52 HOH HOH A . F 6 HOH 150 650 152 HOH HOH A . F 6 HOH 151 651 108 HOH HOH A . F 6 HOH 152 652 94 HOH HOH A . F 6 HOH 153 653 46 HOH HOH A . F 6 HOH 154 654 126 HOH HOH A . F 6 HOH 155 655 183 HOH HOH A . F 6 HOH 156 656 175 HOH HOH A . F 6 HOH 157 657 129 HOH HOH A . F 6 HOH 158 658 215 HOH HOH A . F 6 HOH 159 659 170 HOH HOH A . F 6 HOH 160 660 83 HOH HOH A . F 6 HOH 161 661 65 HOH HOH A . F 6 HOH 162 662 56 HOH HOH A . F 6 HOH 163 663 70 HOH HOH A . F 6 HOH 164 664 66 HOH HOH A . F 6 HOH 165 665 89 HOH HOH A . F 6 HOH 166 666 64 HOH HOH A . F 6 HOH 167 667 103 HOH HOH A . F 6 HOH 168 668 80 HOH HOH A . F 6 HOH 169 669 154 HOH HOH A . F 6 HOH 170 670 172 HOH HOH A . F 6 HOH 171 671 199 HOH HOH A . F 6 HOH 172 672 122 HOH HOH A . F 6 HOH 173 673 87 HOH HOH A . F 6 HOH 174 674 161 HOH HOH A . F 6 HOH 175 675 62 HOH HOH A . F 6 HOH 176 676 109 HOH HOH A . F 6 HOH 177 677 211 HOH HOH A . F 6 HOH 178 678 176 HOH HOH A . F 6 HOH 179 679 101 HOH HOH A . F 6 HOH 180 680 165 HOH HOH A . F 6 HOH 181 681 158 HOH HOH A . F 6 HOH 182 682 203 HOH HOH A . F 6 HOH 183 683 156 HOH HOH A . F 6 HOH 184 684 107 HOH HOH A . F 6 HOH 185 685 214 HOH HOH A . F 6 HOH 186 686 147 HOH HOH A . F 6 HOH 187 687 166 HOH HOH A . F 6 HOH 188 688 192 HOH HOH A . F 6 HOH 189 689 188 HOH HOH A . F 6 HOH 190 690 167 HOH HOH A . F 6 HOH 191 691 72 HOH HOH A . F 6 HOH 192 692 189 HOH HOH A . F 6 HOH 193 693 168 HOH HOH A . F 6 HOH 194 694 153 HOH HOH A . F 6 HOH 195 695 57 HOH HOH A . F 6 HOH 196 696 191 HOH HOH A . F 6 HOH 197 697 97 HOH HOH A . F 6 HOH 198 698 193 HOH HOH A . F 6 HOH 199 699 212 HOH HOH A . F 6 HOH 200 700 174 HOH HOH A . F 6 HOH 201 701 207 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 118 ? CD ? A LYS 12 CD 2 1 Y 1 A LYS 118 ? CE ? A LYS 12 CE 3 1 Y 1 A LYS 118 ? NZ ? A LYS 12 NZ 4 1 Y 1 A LYS 122 ? CE ? A LYS 16 CE 5 1 Y 1 A LYS 122 ? NZ ? A LYS 16 NZ 6 1 Y 1 A GLU 274 ? CD ? A GLU 168 CD 7 1 Y 1 A GLU 274 ? OE1 ? A GLU 168 OE1 8 1 Y 1 A GLU 274 ? OE2 ? A GLU 168 OE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0124 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 115.89 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JED _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.771 _cell.length_a_esd ? _cell.length_b 72.100 _cell.length_b_esd ? _cell.length_c 41.927 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JED _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JED _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.62 _exptl_crystal.description rods _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M NaCacodylate pH=6.5, 5% PEG8000, 40% MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-02-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96862 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.96862 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JED _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.332 _reflns.d_resolution_low 37.720 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 45801 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.7 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.103 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.992 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.332 _reflns_shell.d_res_low 1.337 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.1 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.086 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.11 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 1.30 _refine.aniso_B[2][2] -1.59 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.29 _refine.B_iso_max ? _refine.B_iso_mean 21.216 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.980 _refine.correlation_coeff_Fo_to_Fc_free 0.971 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JED _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.332 _refine.ls_d_res_low 37.72 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 43497 _refine.ls_number_reflns_R_free 2263 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.14 _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.13669 _refine.ls_R_factor_R_free 0.17122 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.13481 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5j4l _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.055 _refine.pdbx_overall_ESU_R_Free 0.052 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.353 _refine.overall_SU_ML 0.041 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1784 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 2007 _refine_hist.d_res_high 1.332 _refine_hist.d_res_low 37.72 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.019 1987 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1927 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.579 1.966 2706 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.958 3.000 4416 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.013 5.000 263 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.871 23.548 93 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.988 15.000 348 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.119 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 300 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 2359 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 481 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.815 1.734 1007 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.813 1.732 1006 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.237 2.614 1285 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.236 2.615 1286 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.900 2.237 980 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.899 2.240 981 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.504 3.195 1422 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.291 16.270 2342 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 3.602 15.509 2258 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 2.200 3.000 3914 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 32.218 5.000 46 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 13.175 5.000 4027 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.332 _refine_ls_shell.d_res_low 1.367 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 148 _refine_ls_shell.number_reflns_R_work 3201 _refine_ls_shell.percent_reflns_obs 98.38 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.376 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.332 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5JED _struct.title 'Apo-structure of humanised RadA-mutant humRadA28' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JED _struct_keywords.text 'DNA repair, fragment based drug design, humanisation, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RADA_PYRFU _struct_ref.pdbx_db_accession O74036 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIAQ NRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLAD LHRLANLYDIAVFVTNQVQARPDAFFGDPTRPIGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGI ED ; _struct_ref.pdbx_align_begin 108 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5JED _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 231 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O74036 _struct_ref_seq.db_align_beg 108 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 349 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 108 _struct_ref_seq.pdbx_auth_seq_align_end 349 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5JED MET A 1 ? UNP O74036 ? ? 'initiating methionine' 107 1 1 5JED LYS A 61 ? UNP O74036 SER 167 'engineered mutation' 167 2 1 5JED ALA A 62 ? UNP O74036 VAL 168 'engineered mutation' 168 3 1 5JED MET A 63 ? UNP O74036 ILE 169 'engineered mutation' 169 4 1 5JED TYR A 64 ? UNP O74036 TRP 170 'engineered mutation' 170 5 1 5JED LEU A 76 ? UNP O74036 ILE 182 'engineered mutation' 182 6 1 5JED ASP A 92 ? UNP O74036 LYS 198 'engineered mutation' 198 7 1 5JED ASN A 93 ? UNP O74036 HIS 199 'engineered mutation' 199 8 1 5JED VAL A 94 ? UNP O74036 ILE 200 'engineered mutation' 200 9 1 5JED ALA A 95 ? UNP O74036 TYR 201 'engineered mutation' 201 10 1 5JED TYR A 96 ? UNP O74036 VAL 202 'engineered mutation' 202 11 1 5JED GLN A 107 ? UNP O74036 LEU 213 'engineered mutation' 213 12 1 5JED LEU A 109 ? UNP O74036 VAL 215 'engineered mutation' 215 13 1 5JED TYR A 110 ? UNP O74036 GLN 216 'engineered mutation' 216 14 1 5JED SER A 113 ? UNP O74036 GLU 219 'engineered mutation' 219 15 1 5JED MET A 115 ? UNP O74036 LYS 221 'engineered mutation' 221 16 1 5JED MET A 116 ? UNP O74036 ILE 222 'engineered mutation' 222 17 1 5JED VAL A 117 ? UNP O74036 LYS 223 'engineered mutation' 223 18 1 5JED SER A 119 ? UNP O74036 LEU 225 'engineered mutation' 225 19 1 5JED TYR A 126 ? UNP O74036 VAL 232 'engineered mutation' 232 20 1 5JED ARG A 157 ? UNP O74036 LYS 263 'engineered mutation' 263 21 1 5JED PHE A 158 ? UNP O74036 HIS 264 'engineered mutation' 264 22 1 5JED ARG A 160 ? UNP O74036 ALA 266 'engineered mutation' 266 23 1 5JED MET A 161 ? UNP O74036 ASP 267 'engineered mutation' 267 24 1 5JED GLU A 168 ? UNP O74036 LEU 274 'engineered mutation' 274 25 1 5JED PHE A 169 ? UNP O74036 TYR 275 'engineered mutation' 275 26 1 5JED ? A ? ? UNP O74036 ARG 288 deletion ? 27 1 5JED ? A ? ? UNP O74036 PRO 289 deletion ? 28 1 5JED ? A ? ? UNP O74036 ASP 290 deletion ? 29 1 5JED ? A ? ? UNP O74036 ALA 291 deletion ? 30 1 5JED ? A ? ? UNP O74036 PHE 292 deletion ? 31 1 5JED ? A ? ? UNP O74036 PHE 293 deletion ? 32 1 5JED ? A ? ? UNP O74036 GLY 294 deletion ? 33 1 5JED ? A ? ? UNP O74036 ASP 295 deletion ? 34 1 5JED ? A ? ? UNP O74036 PRO 296 deletion ? 35 1 5JED ? A ? ? UNP O74036 THR 297 deletion ? 36 1 5JED ? A ? ? UNP O74036 ARG 298 deletion ? 37 1 5JED ? A ? ? UNP O74036 PRO 299 deletion ? 38 1 5JED ASN A 182 ? UNP O74036 ILE 300 'engineered mutation' 288 39 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 980 ? 1 MORE -41 ? 1 'SSA (A^2)' 10560 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? LEU A 18 ? SER A 117 LEU A 124 1 ? 8 HELX_P HELX_P2 AA2 GLY A 37 ? VAL A 49 ? GLY A 143 VAL A 155 1 ? 13 HELX_P HELX_P3 AA3 GLN A 50 ? LEU A 51 ? GLN A 156 LEU A 157 5 ? 2 HELX_P HELX_P4 AA4 PRO A 52 ? GLY A 56 ? PRO A 158 GLY A 162 5 ? 5 HELX_P HELX_P5 AA5 ARG A 72 ? ARG A 83 ? ARG A 178 ARG A 189 1 ? 12 HELX_P HELX_P6 AA6 ASP A 86 ? ASN A 93 ? ASP A 192 ASN A 199 1 ? 8 HELX_P HELX_P7 AA7 ASN A 101 ? LEU A 120 ? ASN A 207 LEU A 226 1 ? 20 HELX_P HELX_P8 AA8 THR A 135 ? TYR A 142 ? THR A 241 TYR A 248 1 ? 8 HELX_P HELX_P9 AA9 GLY A 144 ? ASP A 170 ? GLY A 250 ASP A 276 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 132 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 238 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 133 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 239 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 16.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 6 ? ILE A 7 ? ARG A 112 ILE A 113 AA1 2 ILE A 22 ? GLU A 23 ? ILE A 128 GLU A 129 AA2 1 VAL A 94 ? ARG A 98 ? VAL A 200 ARG A 204 AA2 2 LYS A 61 ? ASP A 66 ? LYS A 167 ASP A 172 AA2 3 TYR A 126 ? ASP A 132 ? TYR A 232 ASP A 238 AA2 4 ALA A 172 ? GLN A 178 ? ALA A 278 GLN A 284 AA2 5 ALA A 26 ? GLY A 32 ? ALA A 132 GLY A 138 AA2 6 LEU A 193 ? LYS A 199 ? LEU A 311 LYS A 317 AA2 7 ARG A 205 ? ILE A 210 ? ARG A 323 ILE A 328 AA2 8 GLY A 218 ? THR A 225 ? GLY A 336 THR A 343 AA2 9 GLY A 228 ? GLU A 230 ? GLY A 346 GLU A 348 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 7 ? N ILE A 113 O ILE A 22 ? O ILE A 128 AA2 1 2 O ALA A 95 ? O ALA A 201 N TYR A 64 ? N TYR A 170 AA2 2 3 N ILE A 65 ? N ILE A 171 O ILE A 130 ? O ILE A 236 AA2 3 4 N LEU A 129 ? N LEU A 235 O PHE A 174 ? O PHE A 280 AA2 4 5 O VAL A 173 ? O VAL A 279 N THR A 28 ? N THR A 134 AA2 5 6 N GLU A 29 ? N GLU A 135 O LEU A 193 ? O LEU A 311 AA2 6 7 N ARG A 198 ? N ARG A 316 O ILE A 206 ? O ILE A 324 AA2 7 8 N ARG A 205 ? N ARG A 323 O PHE A 222 ? O PHE A 340 AA2 8 9 N SER A 223 ? N SER A 341 O GLU A 230 ? O GLU A 348 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 401 ? 12 'binding site for residue SO4 A 401' AC2 Software A MPD 402 ? 8 'binding site for residue MPD A 402' AC3 Software A MRD 403 ? 7 'binding site for residue MRD A 403' AC4 Software A CL 404 ? 2 'binding site for residue CL A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLU A 33 ? GLU A 139 . ? 1_555 ? 2 AC1 12 PHE A 34 ? PHE A 140 . ? 1_555 ? 3 AC1 12 GLY A 35 ? GLY A 141 . ? 1_555 ? 4 AC1 12 SER A 36 ? SER A 142 . ? 1_555 ? 5 AC1 12 GLY A 37 ? GLY A 143 . ? 1_555 ? 6 AC1 12 LYS A 38 ? LYS A 144 . ? 1_555 ? 7 AC1 12 THR A 39 ? THR A 145 . ? 1_555 ? 8 AC1 12 HOH F . ? HOH A 538 . ? 1_555 ? 9 AC1 12 HOH F . ? HOH A 539 . ? 1_555 ? 10 AC1 12 HOH F . ? HOH A 556 . ? 1_555 ? 11 AC1 12 HOH F . ? HOH A 587 . ? 1_555 ? 12 AC1 12 HOH F . ? HOH A 634 . ? 1_555 ? 13 AC2 8 GLU A 29 ? GLU A 135 . ? 1_555 ? 14 AC2 8 LEU A 134 ? LEU A 240 . ? 1_555 ? 15 AC2 8 LEU A 155 ? LEU A 261 . ? 1_555 ? 16 AC2 8 ASN A 177 ? ASN A 283 . ? 1_555 ? 17 AC2 8 ILE A 186 ? ILE A 292 . ? 1_555 ? 18 AC2 8 ARG A 194 ? ARG A 312 . ? 1_555 ? 19 AC2 8 HOH F . ? HOH A 542 . ? 1_555 ? 20 AC2 8 HOH F . ? HOH A 649 . ? 1_555 ? 21 AC3 7 SER A 8 ? SER A 114 . ? 1_555 ? 22 AC3 7 LYS A 12 ? LYS A 118 . ? 1_555 ? 23 AC3 7 ASP A 15 ? ASP A 121 . ? 1_555 ? 24 AC3 7 MET A 48 ? MET A 154 . ? 1_555 ? 25 AC3 7 GLU A 55 ? GLU A 161 . ? 1_555 ? 26 AC3 7 GLY A 56 ? GLY A 162 . ? 1_555 ? 27 AC3 7 HOH F . ? HOH A 505 . ? 1_555 ? 28 AC4 2 HIS A 163 ? HIS A 269 . ? 1_555 ? 29 AC4 2 ALA A 191 ? ALA A 297 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 344 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 501 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 227 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -106.32 _pdbx_validate_torsion.psi 43.98 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 107 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 MPD C1 C N N 237 MPD C2 C N N 238 MPD O2 O N N 239 MPD CM C N N 240 MPD C3 C N N 241 MPD C4 C N S 242 MPD O4 O N N 243 MPD C5 C N N 244 MPD H11 H N N 245 MPD H12 H N N 246 MPD H13 H N N 247 MPD HO2 H N N 248 MPD HM1 H N N 249 MPD HM2 H N N 250 MPD HM3 H N N 251 MPD H31 H N N 252 MPD H32 H N N 253 MPD H4 H N N 254 MPD HO4 H N N 255 MPD H51 H N N 256 MPD H52 H N N 257 MPD H53 H N N 258 MRD C1 C N N 259 MRD C2 C N N 260 MRD O2 O N N 261 MRD CM C N N 262 MRD C3 C N N 263 MRD C4 C N R 264 MRD O4 O N N 265 MRD C5 C N N 266 MRD H1C1 H N N 267 MRD H1C2 H N N 268 MRD H1C3 H N N 269 MRD H2 H N N 270 MRD HMC1 H N N 271 MRD HMC2 H N N 272 MRD HMC3 H N N 273 MRD H3C1 H N N 274 MRD H3C2 H N N 275 MRD H4 H N N 276 MRD HA H N N 277 MRD H5C1 H N N 278 MRD H5C2 H N N 279 MRD H5C3 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SER N N N N 321 SER CA C N S 322 SER C C N N 323 SER O O N N 324 SER CB C N N 325 SER OG O N N 326 SER OXT O N N 327 SER H H N N 328 SER H2 H N N 329 SER HA H N N 330 SER HB2 H N N 331 SER HB3 H N N 332 SER HG H N N 333 SER HXT H N N 334 SO4 S S N N 335 SO4 O1 O N N 336 SO4 O2 O N N 337 SO4 O3 O N N 338 SO4 O4 O N N 339 THR N N N N 340 THR CA C N S 341 THR C C N N 342 THR O O N N 343 THR CB C N R 344 THR OG1 O N N 345 THR CG2 C N N 346 THR OXT O N N 347 THR H H N N 348 THR H2 H N N 349 THR HA H N N 350 THR HB H N N 351 THR HG1 H N N 352 THR HG21 H N N 353 THR HG22 H N N 354 THR HG23 H N N 355 THR HXT H N N 356 TRP N N N N 357 TRP CA C N S 358 TRP C C N N 359 TRP O O N N 360 TRP CB C N N 361 TRP CG C Y N 362 TRP CD1 C Y N 363 TRP CD2 C Y N 364 TRP NE1 N Y N 365 TRP CE2 C Y N 366 TRP CE3 C Y N 367 TRP CZ2 C Y N 368 TRP CZ3 C Y N 369 TRP CH2 C Y N 370 TRP OXT O N N 371 TRP H H N N 372 TRP H2 H N N 373 TRP HA H N N 374 TRP HB2 H N N 375 TRP HB3 H N N 376 TRP HD1 H N N 377 TRP HE1 H N N 378 TRP HE3 H N N 379 TRP HZ2 H N N 380 TRP HZ3 H N N 381 TRP HH2 H N N 382 TRP HXT H N N 383 TYR N N N N 384 TYR CA C N S 385 TYR C C N N 386 TYR O O N N 387 TYR CB C N N 388 TYR CG C Y N 389 TYR CD1 C Y N 390 TYR CD2 C Y N 391 TYR CE1 C Y N 392 TYR CE2 C Y N 393 TYR CZ C Y N 394 TYR OH O N N 395 TYR OXT O N N 396 TYR H H N N 397 TYR H2 H N N 398 TYR HA H N N 399 TYR HB2 H N N 400 TYR HB3 H N N 401 TYR HD1 H N N 402 TYR HD2 H N N 403 TYR HE1 H N N 404 TYR HE2 H N N 405 TYR HH H N N 406 TYR HXT H N N 407 VAL N N N N 408 VAL CA C N S 409 VAL C C N N 410 VAL O O N N 411 VAL CB C N N 412 VAL CG1 C N N 413 VAL CG2 C N N 414 VAL OXT O N N 415 VAL H H N N 416 VAL H2 H N N 417 VAL HA H N N 418 VAL HB H N N 419 VAL HG11 H N N 420 VAL HG12 H N N 421 VAL HG13 H N N 422 VAL HG21 H N N 423 VAL HG22 H N N 424 VAL HG23 H N N 425 VAL HXT H N N 426 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 MPD C1 C2 sing N N 224 MPD C1 H11 sing N N 225 MPD C1 H12 sing N N 226 MPD C1 H13 sing N N 227 MPD C2 O2 sing N N 228 MPD C2 CM sing N N 229 MPD C2 C3 sing N N 230 MPD O2 HO2 sing N N 231 MPD CM HM1 sing N N 232 MPD CM HM2 sing N N 233 MPD CM HM3 sing N N 234 MPD C3 C4 sing N N 235 MPD C3 H31 sing N N 236 MPD C3 H32 sing N N 237 MPD C4 O4 sing N N 238 MPD C4 C5 sing N N 239 MPD C4 H4 sing N N 240 MPD O4 HO4 sing N N 241 MPD C5 H51 sing N N 242 MPD C5 H52 sing N N 243 MPD C5 H53 sing N N 244 MRD C1 C2 sing N N 245 MRD C1 H1C1 sing N N 246 MRD C1 H1C2 sing N N 247 MRD C1 H1C3 sing N N 248 MRD C2 O2 sing N N 249 MRD C2 CM sing N N 250 MRD C2 C3 sing N N 251 MRD O2 H2 sing N N 252 MRD CM HMC1 sing N N 253 MRD CM HMC2 sing N N 254 MRD CM HMC3 sing N N 255 MRD C3 C4 sing N N 256 MRD C3 H3C1 sing N N 257 MRD C3 H3C2 sing N N 258 MRD C4 O4 sing N N 259 MRD C4 C5 sing N N 260 MRD C4 H4 sing N N 261 MRD O4 HA sing N N 262 MRD C5 H5C1 sing N N 263 MRD C5 H5C2 sing N N 264 MRD C5 H5C3 sing N N 265 PHE N CA sing N N 266 PHE N H sing N N 267 PHE N H2 sing N N 268 PHE CA C sing N N 269 PHE CA CB sing N N 270 PHE CA HA sing N N 271 PHE C O doub N N 272 PHE C OXT sing N N 273 PHE CB CG sing N N 274 PHE CB HB2 sing N N 275 PHE CB HB3 sing N N 276 PHE CG CD1 doub Y N 277 PHE CG CD2 sing Y N 278 PHE CD1 CE1 sing Y N 279 PHE CD1 HD1 sing N N 280 PHE CD2 CE2 doub Y N 281 PHE CD2 HD2 sing N N 282 PHE CE1 CZ doub Y N 283 PHE CE1 HE1 sing N N 284 PHE CE2 CZ sing Y N 285 PHE CE2 HE2 sing N N 286 PHE CZ HZ sing N N 287 PHE OXT HXT sing N N 288 PRO N CA sing N N 289 PRO N CD sing N N 290 PRO N H sing N N 291 PRO CA C sing N N 292 PRO CA CB sing N N 293 PRO CA HA sing N N 294 PRO C O doub N N 295 PRO C OXT sing N N 296 PRO CB CG sing N N 297 PRO CB HB2 sing N N 298 PRO CB HB3 sing N N 299 PRO CG CD sing N N 300 PRO CG HG2 sing N N 301 PRO CG HG3 sing N N 302 PRO CD HD2 sing N N 303 PRO CD HD3 sing N N 304 PRO OXT HXT sing N N 305 SER N CA sing N N 306 SER N H sing N N 307 SER N H2 sing N N 308 SER CA C sing N N 309 SER CA CB sing N N 310 SER CA HA sing N N 311 SER C O doub N N 312 SER C OXT sing N N 313 SER CB OG sing N N 314 SER CB HB2 sing N N 315 SER CB HB3 sing N N 316 SER OG HG sing N N 317 SER OXT HXT sing N N 318 SO4 S O1 doub N N 319 SO4 S O2 doub N N 320 SO4 S O3 sing N N 321 SO4 S O4 sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5J4L _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5JED _atom_sites.fract_transf_matrix[1][1] 0.026475 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.012848 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013870 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026511 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_