data_5JFD # _entry.id 5JFD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5JFD pdb_00005jfd 10.2210/pdb5jfd/pdb WWPDB D_1000220158 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-05-24 2 'Structure model' 1 1 2018-06-20 3 'Structure model' 1 2 2019-11-27 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2024-01-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_molecule_features 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_nonpoly 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site 11 4 'Structure model' struct_site_gen 12 5 'Structure model' chem_comp 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond 15 5 'Structure model' database_2 16 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.country' 2 3 'Structure model' '_citation.journal_abbrev' 3 3 'Structure model' '_citation.journal_id_ASTM' 4 3 'Structure model' '_citation.journal_id_CSD' 5 3 'Structure model' '_citation.journal_id_ISSN' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation.pdbx_database_id_DOI' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' 12 3 'Structure model' '_citation.year' 13 4 'Structure model' '_chem_comp.name' 14 4 'Structure model' '_chem_comp.type' 15 4 'Structure model' '_entity.pdbx_description' 16 4 'Structure model' '_pdbx_entity_nonpoly.name' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_PDB_ins_code' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_PDB_ins_code' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 31 4 'Structure model' '_pdbx_struct_conn_angle.value' 32 4 'Structure model' '_struct_conn.conn_type_id' 33 4 'Structure model' '_struct_conn.id' 34 4 'Structure model' '_struct_conn.pdbx_dist_value' 35 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 36 4 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 37 4 'Structure model' '_struct_conn.pdbx_role' 38 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 39 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 40 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 45 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 46 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 47 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 48 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 49 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 50 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 51 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 52 4 'Structure model' '_struct_conn.ptnr2_symmetry' 53 5 'Structure model' '_chem_comp.pdbx_synonyms' 54 5 'Structure model' '_database_2.pdbx_DOI' 55 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5JFD _pdbx_database_status.recvd_initial_deposition_date 2016-04-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Guanidine sidechain of ligand had two different conformations. Desity not clear.' _pdbx_database_related.db_id 3EQ0 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sandner, A.' 1 'Heine, A.' 2 'Klebe, G.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 62 _citation.language ? _citation.page_first 9753 _citation.page_last 9771 _citation.title 'Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.9b01196 _citation.pdbx_database_id_PubMed 31633354 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sandner, A.' 1 ? primary 'Hufner-Wulsdorf, T.' 2 ? primary 'Heine, A.' 3 ? primary 'Steinmetzer, T.' 4 0000-0001-6523-4754 primary 'Klebe, G.' 5 0000-0002-4913-390X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Prothrombin 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat Prothrombin 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'Hirudin variant-2' 1548.580 1 ? ? ? ;http://shop.bachem.com/h-7425.html contains sulfated tyrosine ; 4 non-polymer syn ;(2S)-N-[[2-(aminomethyl)-5-chloro-phenyl]methyl]-1-[(2R)-5-carbamimidamido-2-(phenylmethylsulfonylamino)pentanoyl]pyrrolidine-2-carboxamide ; 578.127 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 8 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 9 water nat water 18.015 264 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'GDFEEIPEE(TYS)LQ' GDFEEIPEEYLQ I ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 ;(2S)-N-[[2-(aminomethyl)-5-chloro-phenyl]methyl]-1-[(2R)-5-carbamimidamido-2-(phenylmethylsulfonylamino)pentanoyl]pyrrolidine-2-carboxamide ; 2TS 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 'SODIUM ION' NA 7 GLYCEROL GOL 8 'DIMETHYL SULFOXIDE' DMS 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 GLY n 3 2 ASP n 3 3 PHE n 3 4 GLU n 3 5 GLU n 3 6 ILE n 3 7 PRO n 3 8 GLU n 3 9 GLU n 3 10 TYS n 3 11 LEU n 3 12 GLN n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 36 Human 'Homo sapiens' 9606 ? ? ? Blood ? ? ? ? ? ? ? ? ? ? ? 'PURIFIED FROM HUMAN BLOOD PLASMA' ? 2 1 sample 1 259 Human 'Homo sapiens' 9606 ? ? ? Blood ? ? ? ? ? ? ? ? ? ? ? 'PURIFIED FROM HUMAN BLOOD PLASMA' ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name 'Medicinal leech' _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2TS peptide-like . ;(2S)-N-[[2-(aminomethyl)-5-chloro-phenyl]methyl]-1-[(2R)-5-carbamimidamido-2-(phenylmethylsulfonylamino)pentanoyl]pyrrolidine-2-carboxamide ; '(S)-1-((R)-5-Guanidino-2-phenylmethanesulfonylamino-pentanoyl)-pyrrolidine-2-carboxylic acid 2aminomethyl-5-chloro-benzylamide' 'C26 H36 Cl N7 O4 S' 578.127 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 -4 ? ? ? L . n A 1 2 PHE 2 -3 ? ? ? L . n A 1 3 GLY 3 -2 ? ? ? L . n A 1 4 SER 4 -1 ? ? ? L . n A 1 5 GLY 5 0 ? ? ? L . n A 1 6 GLU 6 1 1 GLU GLU L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 15 15 ASP ASP L . n A 1 35 GLY 35 16 16 GLY GLY L . n A 1 36 ARG 36 17 17 ARG ARG L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 148 TRP TRP H . n B 2 149 THR 149 148 ? ? ? H A n B 2 150 ALA 150 148 ? ? ? H B n B 2 151 ASN 151 148 ? ? ? H C n B 2 152 VAL 152 148 ? ? ? H D n B 2 153 GLY 153 148 ? ? ? H E n B 2 154 LYS 154 148 ? ? ? H F n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 GLY 1 554 ? ? ? I . n C 3 2 ASP 2 555 555 ASP ASP I . n C 3 3 PHE 3 556 556 PHE PHE I . n C 3 4 GLU 4 557 557 GLU GLU I . n C 3 5 GLU 5 558 558 GLU GLU I . n C 3 6 ILE 6 559 559 ILE ILE I . n C 3 7 PRO 7 560 560 PRO PRO I . n C 3 8 GLU 8 561 561 GLU GLU I . n C 3 9 GLU 9 562 562 GLU GLU I . n C 3 10 TYS 10 563 563 TYS TYS I . n C 3 11 LEU 11 564 564 LEU LEU I . n C 3 12 GLN 12 565 565 GLN GLN I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 2TS 1 301 1 2TS XXX H . E 5 NAG 1 302 1 NAG NAG H . F 6 NA 1 303 2 NA NA H . G 6 NA 1 304 3 NA NA H . H 7 GOL 1 305 4 GOL GOL H . I 8 DMS 1 306 5 DMS DMS H . J 7 GOL 1 307 6 GOL GOL H . K 9 HOH 1 201 201 HOH HOH L . K 9 HOH 2 202 255 HOH HOH L . K 9 HOH 3 203 80 HOH HOH L . K 9 HOH 4 204 60 HOH HOH L . K 9 HOH 5 205 19 HOH HOH L . K 9 HOH 6 206 34 HOH HOH L . K 9 HOH 7 207 52 HOH HOH L . K 9 HOH 8 208 278 HOH HOH L . K 9 HOH 9 209 96 HOH HOH L . K 9 HOH 10 210 71 HOH HOH L . K 9 HOH 11 211 208 HOH HOH L . K 9 HOH 12 212 311 HOH HOH L . K 9 HOH 13 213 58 HOH HOH L . K 9 HOH 14 214 191 HOH HOH L . K 9 HOH 15 215 36 HOH HOH L . K 9 HOH 16 216 63 HOH HOH L . K 9 HOH 17 217 249 HOH HOH L . K 9 HOH 18 218 183 HOH HOH L . K 9 HOH 19 219 199 HOH HOH L . K 9 HOH 20 220 194 HOH HOH L . K 9 HOH 21 221 290 HOH HOH L . K 9 HOH 22 222 198 HOH HOH L . K 9 HOH 23 223 180 HOH HOH L . K 9 HOH 24 224 202 HOH HOH L . K 9 HOH 25 225 210 HOH HOH L . K 9 HOH 26 226 253 HOH HOH L . K 9 HOH 27 227 215 HOH HOH L . L 9 HOH 1 401 122 HOH HOH H . L 9 HOH 2 402 288 HOH HOH H . L 9 HOH 3 403 160 HOH HOH H . L 9 HOH 4 404 28 HOH HOH H . L 9 HOH 5 405 97 HOH HOH H . L 9 HOH 6 406 167 HOH HOH H . L 9 HOH 7 407 144 HOH HOH H . L 9 HOH 8 408 238 HOH HOH H . L 9 HOH 9 409 115 HOH HOH H . L 9 HOH 10 410 157 HOH HOH H . L 9 HOH 11 411 138 HOH HOH H . L 9 HOH 12 412 109 HOH HOH H . L 9 HOH 13 413 212 HOH HOH H . L 9 HOH 14 414 197 HOH HOH H . L 9 HOH 15 415 121 HOH HOH H . L 9 HOH 16 416 56 HOH HOH H . L 9 HOH 17 417 53 HOH HOH H . L 9 HOH 18 418 84 HOH HOH H . L 9 HOH 19 419 135 HOH HOH H . L 9 HOH 20 420 244 HOH HOH H . L 9 HOH 21 421 171 HOH HOH H . L 9 HOH 22 422 61 HOH HOH H . L 9 HOH 23 423 105 HOH HOH H . L 9 HOH 24 424 300 HOH HOH H . L 9 HOH 25 425 15 HOH HOH H . L 9 HOH 26 426 70 HOH HOH H . L 9 HOH 27 427 127 HOH HOH H . L 9 HOH 28 428 151 HOH HOH H . L 9 HOH 29 429 285 HOH HOH H . L 9 HOH 30 430 272 HOH HOH H . L 9 HOH 31 431 239 HOH HOH H . L 9 HOH 32 432 116 HOH HOH H . L 9 HOH 33 433 91 HOH HOH H . L 9 HOH 34 434 47 HOH HOH H . L 9 HOH 35 435 218 HOH HOH H . L 9 HOH 36 436 262 HOH HOH H . L 9 HOH 37 437 161 HOH HOH H . L 9 HOH 38 438 162 HOH HOH H . L 9 HOH 39 439 111 HOH HOH H . L 9 HOH 40 440 46 HOH HOH H . L 9 HOH 41 441 103 HOH HOH H . L 9 HOH 42 442 153 HOH HOH H . L 9 HOH 43 443 195 HOH HOH H . L 9 HOH 44 444 54 HOH HOH H . L 9 HOH 45 445 235 HOH HOH H . L 9 HOH 46 446 72 HOH HOH H . L 9 HOH 47 447 163 HOH HOH H . L 9 HOH 48 448 148 HOH HOH H . L 9 HOH 49 449 155 HOH HOH H . L 9 HOH 50 450 18 HOH HOH H . L 9 HOH 51 451 156 HOH HOH H . L 9 HOH 52 452 188 HOH HOH H . L 9 HOH 53 453 130 HOH HOH H . L 9 HOH 54 454 82 HOH HOH H . L 9 HOH 55 455 124 HOH HOH H . L 9 HOH 56 456 222 HOH HOH H . L 9 HOH 57 457 99 HOH HOH H . L 9 HOH 58 458 89 HOH HOH H . L 9 HOH 59 459 141 HOH HOH H . L 9 HOH 60 460 59 HOH HOH H . L 9 HOH 61 461 240 HOH HOH H . L 9 HOH 62 462 30 HOH HOH H . L 9 HOH 63 463 9 HOH HOH H . L 9 HOH 64 464 221 HOH HOH H . L 9 HOH 65 465 227 HOH HOH H . L 9 HOH 66 466 41 HOH HOH H . L 9 HOH 67 467 110 HOH HOH H . L 9 HOH 68 468 64 HOH HOH H . L 9 HOH 69 469 26 HOH HOH H . L 9 HOH 70 470 33 HOH HOH H . L 9 HOH 71 471 38 HOH HOH H . L 9 HOH 72 472 193 HOH HOH H . L 9 HOH 73 473 77 HOH HOH H . L 9 HOH 74 474 273 HOH HOH H . L 9 HOH 75 475 69 HOH HOH H . L 9 HOH 76 476 6 HOH HOH H . L 9 HOH 77 477 66 HOH HOH H . L 9 HOH 78 478 176 HOH HOH H . L 9 HOH 79 479 22 HOH HOH H . L 9 HOH 80 480 16 HOH HOH H . L 9 HOH 81 481 168 HOH HOH H . L 9 HOH 82 482 45 HOH HOH H . L 9 HOH 83 483 172 HOH HOH H . L 9 HOH 84 484 145 HOH HOH H . L 9 HOH 85 485 165 HOH HOH H . L 9 HOH 86 486 44 HOH HOH H . L 9 HOH 87 487 83 HOH HOH H . L 9 HOH 88 488 214 HOH HOH H . L 9 HOH 89 489 93 HOH HOH H . L 9 HOH 90 490 283 HOH HOH H . L 9 HOH 91 491 123 HOH HOH H . L 9 HOH 92 492 49 HOH HOH H . L 9 HOH 93 493 225 HOH HOH H . L 9 HOH 94 494 73 HOH HOH H . L 9 HOH 95 495 12 HOH HOH H . L 9 HOH 96 496 20 HOH HOH H . L 9 HOH 97 497 57 HOH HOH H . L 9 HOH 98 498 4 HOH HOH H . L 9 HOH 99 499 29 HOH HOH H . L 9 HOH 100 500 106 HOH HOH H . L 9 HOH 101 501 10 HOH HOH H . L 9 HOH 102 502 13 HOH HOH H . L 9 HOH 103 503 37 HOH HOH H . L 9 HOH 104 504 170 HOH HOH H . L 9 HOH 105 505 25 HOH HOH H . L 9 HOH 106 506 133 HOH HOH H . L 9 HOH 107 507 295 HOH HOH H . L 9 HOH 108 508 50 HOH HOH H . L 9 HOH 109 509 67 HOH HOH H . L 9 HOH 110 510 51 HOH HOH H . L 9 HOH 111 511 90 HOH HOH H . L 9 HOH 112 512 14 HOH HOH H . L 9 HOH 113 513 27 HOH HOH H . L 9 HOH 114 514 21 HOH HOH H . L 9 HOH 115 515 92 HOH HOH H . L 9 HOH 116 516 245 HOH HOH H . L 9 HOH 117 517 24 HOH HOH H . L 9 HOH 118 518 190 HOH HOH H . L 9 HOH 119 519 158 HOH HOH H . L 9 HOH 120 520 152 HOH HOH H . L 9 HOH 121 521 31 HOH HOH H . L 9 HOH 122 522 7 HOH HOH H . L 9 HOH 123 523 274 HOH HOH H . L 9 HOH 124 524 17 HOH HOH H . L 9 HOH 125 525 48 HOH HOH H . L 9 HOH 126 526 8 HOH HOH H . L 9 HOH 127 527 85 HOH HOH H . L 9 HOH 128 528 223 HOH HOH H . L 9 HOH 129 529 177 HOH HOH H . L 9 HOH 130 530 323 HOH HOH H . L 9 HOH 131 531 226 HOH HOH H . L 9 HOH 132 532 40 HOH HOH H . L 9 HOH 133 533 88 HOH HOH H . L 9 HOH 134 534 220 HOH HOH H . L 9 HOH 135 535 100 HOH HOH H . L 9 HOH 136 536 173 HOH HOH H . L 9 HOH 137 537 65 HOH HOH H . L 9 HOH 138 538 11 HOH HOH H . L 9 HOH 139 539 39 HOH HOH H . L 9 HOH 140 540 150 HOH HOH H . L 9 HOH 141 541 186 HOH HOH H . L 9 HOH 142 542 142 HOH HOH H . L 9 HOH 143 543 181 HOH HOH H . L 9 HOH 144 544 43 HOH HOH H . L 9 HOH 145 545 139 HOH HOH H . L 9 HOH 146 546 76 HOH HOH H . L 9 HOH 147 547 178 HOH HOH H . L 9 HOH 148 548 3 HOH HOH H . L 9 HOH 149 549 187 HOH HOH H . L 9 HOH 150 550 78 HOH HOH H . L 9 HOH 151 551 169 HOH HOH H . L 9 HOH 152 552 231 HOH HOH H . L 9 HOH 153 553 128 HOH HOH H . L 9 HOH 154 554 129 HOH HOH H . L 9 HOH 155 555 307 HOH HOH H . L 9 HOH 156 556 140 HOH HOH H . L 9 HOH 157 557 136 HOH HOH H . L 9 HOH 158 558 79 HOH HOH H . L 9 HOH 159 559 55 HOH HOH H . L 9 HOH 160 560 75 HOH HOH H . L 9 HOH 161 561 104 HOH HOH H . L 9 HOH 162 562 260 HOH HOH H . L 9 HOH 163 563 86 HOH HOH H . L 9 HOH 164 564 211 HOH HOH H . L 9 HOH 165 565 62 HOH HOH H . L 9 HOH 166 566 228 HOH HOH H . L 9 HOH 167 567 321 HOH HOH H . L 9 HOH 168 568 275 HOH HOH H . L 9 HOH 169 569 184 HOH HOH H . L 9 HOH 170 570 87 HOH HOH H . L 9 HOH 171 571 118 HOH HOH H . L 9 HOH 172 572 143 HOH HOH H . L 9 HOH 173 573 261 HOH HOH H . L 9 HOH 174 574 146 HOH HOH H . L 9 HOH 175 575 316 HOH HOH H . L 9 HOH 176 576 175 HOH HOH H . L 9 HOH 177 577 95 HOH HOH H . L 9 HOH 178 578 297 HOH HOH H . L 9 HOH 179 579 217 HOH HOH H . L 9 HOH 180 580 286 HOH HOH H . L 9 HOH 181 581 232 HOH HOH H . L 9 HOH 182 582 113 HOH HOH H . L 9 HOH 183 583 149 HOH HOH H . L 9 HOH 184 584 263 HOH HOH H . L 9 HOH 185 585 241 HOH HOH H . L 9 HOH 186 586 216 HOH HOH H . L 9 HOH 187 587 23 HOH HOH H . L 9 HOH 188 588 230 HOH HOH H . L 9 HOH 189 589 269 HOH HOH H . L 9 HOH 190 590 185 HOH HOH H . L 9 HOH 191 591 271 HOH HOH H . L 9 HOH 192 592 322 HOH HOH H . L 9 HOH 193 593 309 HOH HOH H . L 9 HOH 194 594 306 HOH HOH H . L 9 HOH 195 595 101 HOH HOH H . L 9 HOH 196 596 119 HOH HOH H . L 9 HOH 197 597 236 HOH HOH H . L 9 HOH 198 598 174 HOH HOH H . L 9 HOH 199 599 280 HOH HOH H . L 9 HOH 200 600 270 HOH HOH H . L 9 HOH 201 601 182 HOH HOH H . L 9 HOH 202 602 281 HOH HOH H . L 9 HOH 203 603 164 HOH HOH H . L 9 HOH 204 604 132 HOH HOH H . L 9 HOH 205 605 112 HOH HOH H . L 9 HOH 206 606 308 HOH HOH H . L 9 HOH 207 607 154 HOH HOH H . L 9 HOH 208 608 131 HOH HOH H . L 9 HOH 209 609 233 HOH HOH H . L 9 HOH 210 610 243 HOH HOH H . L 9 HOH 211 611 267 HOH HOH H . L 9 HOH 212 612 81 HOH HOH H . L 9 HOH 213 613 213 HOH HOH H . L 9 HOH 214 614 294 HOH HOH H . L 9 HOH 215 615 137 HOH HOH H . L 9 HOH 216 616 234 HOH HOH H . L 9 HOH 217 617 291 HOH HOH H . L 9 HOH 218 618 114 HOH HOH H . L 9 HOH 219 619 266 HOH HOH H . L 9 HOH 220 620 166 HOH HOH H . L 9 HOH 221 621 192 HOH HOH H . L 9 HOH 222 622 196 HOH HOH H . L 9 HOH 223 623 265 HOH HOH H . L 9 HOH 224 624 98 HOH HOH H . L 9 HOH 225 625 237 HOH HOH H . L 9 HOH 226 626 209 HOH HOH H . L 9 HOH 227 627 318 HOH HOH H . L 9 HOH 228 628 134 HOH HOH H . L 9 HOH 229 629 254 HOH HOH H . L 9 HOH 230 630 259 HOH HOH H . L 9 HOH 231 631 107 HOH HOH H . M 9 HOH 1 601 256 HOH HOH I . M 9 HOH 2 602 206 HOH HOH I . M 9 HOH 3 603 102 HOH HOH I . M 9 HOH 4 604 205 HOH HOH I . M 9 HOH 5 605 257 HOH HOH I . M 9 HOH 6 606 207 HOH HOH I . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 L GLU 1 C CG ? A GLU 6 CG 2 1 Y 1 L GLU 1 C CD ? A GLU 6 CD 3 1 Y 1 L GLU 1 C OE1 ? A GLU 6 OE1 4 1 Y 1 L GLU 1 C OE2 ? A GLU 6 OE2 5 1 Y 1 L LYS 9 ? NZ ? A LYS 17 NZ 6 1 Y 1 L LYS 14 A NZ ? A LYS 23 NZ 7 1 Y 1 L ASP 15 ? CG ? A ASP 34 CG 8 1 Y 1 L ASP 15 ? OD1 ? A ASP 34 OD1 9 1 Y 1 L ASP 15 ? OD2 ? A ASP 34 OD2 10 1 Y 1 H MET 84 ? CE ? B MET 80 CE 11 1 Y 1 H LYS 87 ? CE ? B LYS 83 CE 12 1 Y 1 H LYS 87 ? NZ ? B LYS 83 NZ 13 1 Y 1 H LYS 107 ? NZ ? B LYS 104 NZ 14 1 Y 1 H LYS 110 ? CD ? B LYS 107 CD 15 1 Y 1 H LYS 110 ? CE ? B LYS 107 CE 16 1 Y 1 H LYS 110 ? NZ ? B LYS 107 NZ 17 1 Y 1 H ASP 186 A CG ? B ASP 193 CG 18 1 Y 1 H ASP 186 A OD1 ? B ASP 193 OD1 19 1 Y 1 H ASP 186 A OD2 ? B ASP 193 OD2 20 1 Y 1 H LYS 186 D CE ? B LYS 196 CE 21 1 Y 1 H LYS 186 D NZ ? B LYS 196 NZ 22 1 Y 1 H LYS 236 ? CD ? B LYS 248 CD 23 1 Y 1 H LYS 236 ? CE ? B LYS 248 CE 24 1 Y 1 H LYS 236 ? NZ ? B LYS 248 NZ 25 1 Y 1 H GLN 239 ? CG ? B GLN 251 CG 26 1 Y 1 H GLN 239 ? CD ? B GLN 251 CD 27 1 Y 1 H GLN 239 ? OE1 ? B GLN 251 OE1 28 1 Y 1 H GLN 239 ? NE2 ? B GLN 251 NE2 29 1 Y 1 H LYS 240 ? CD ? B LYS 252 CD 30 1 Y 1 H LYS 240 ? CE ? B LYS 252 CE 31 1 Y 1 H LYS 240 ? NZ ? B LYS 252 NZ 32 1 Y 1 I ASP 555 ? CG ? C ASP 2 CG 33 1 Y 1 I ASP 555 ? OD1 ? C ASP 2 OD1 34 1 Y 1 I ASP 555 ? OD2 ? C ASP 2 OD2 35 1 Y 1 I GLU 558 ? CG ? C GLU 5 CG 36 1 Y 1 I GLU 558 ? CD ? C GLU 5 CD 37 1 Y 1 I GLU 558 ? OE1 ? C GLU 5 OE1 38 1 Y 1 I GLU 558 ? OE2 ? C GLU 5 OE2 39 1 Y 1 I GLU 561 ? CG ? C GLU 8 CG 40 1 Y 1 I GLU 561 ? CD ? C GLU 8 CD 41 1 Y 1 I GLU 561 ? OE1 ? C GLU 8 OE1 42 1 Y 1 I GLU 561 ? OE2 ? C GLU 8 OE2 43 1 Y 1 I GLN 565 ? CG ? C GLN 12 CG 44 1 Y 1 I GLN 565 ? CD ? C GLN 12 CD 45 1 Y 1 I GLN 565 ? OE1 ? C GLN 12 OE1 46 1 Y 1 I GLN 565 ? NE2 ? C GLN 12 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 'Punta Carretas 0.8-pre (revision 5201) [with guile 1.8.8 embedded] [with python 2.7.8 embedded]' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 99.79 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5JFD _cell.details ? _cell.formula_units_Z ? _cell.length_a 69.367 _cell.length_a_esd ? _cell.length_b 71.490 _cell.length_b_esd ? _cell.length_c 72.135 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5JFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5JFD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;20 mM Sodium dihydrogen phosphate ph 7.5, 350 mM NACl, 27% PEG 8000, ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Sagitally bended Si111-crystal' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91841 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5JFD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.46 _reflns.d_resolution_low 43.130 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 58841 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.039 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.46 _reflns_shell.d_res_low 1.55 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 95.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.47 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'Phenix refinement' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5JFD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.46 _refine.ls_d_res_low 43.130 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 58835 _refine.ls_number_reflns_R_free 2941 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.34 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1317 _refine.ls_R_factor_R_free 0.1633 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1300 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1H8D _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.29 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.14 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2356 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 71 _refine_hist.number_atoms_solvent 264 _refine_hist.number_atoms_total 2691 _refine_hist.d_res_high 1.46 _refine_hist.d_res_low 43.130 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 2589 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.217 ? 3518 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.041 ? 1004 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.095 ? 366 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 468 ? f_plane_restr ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.46 _refine_ls_shell.d_res_low 1.4823 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 131 _refine_ls_shell.number_reflns_R_work 2493 _refine_ls_shell.percent_reflns_obs 92.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2932 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2424 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5JFD _struct.title 'Thrombin in complex with (S)-N-(2-(aminomethyl)-5-chlorobenzyl)-1-((benzylsulfonyl)-D-arginyl)pyrrolidine-2-carboxamide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5JFD _struct_keywords.text ;COAGULATION, BLOOD CLOTTING, CONVERTION OF FIBRINOGEN TO FIBRIN, BLOOD CLOTTING INHIBITOR, THROMBIN INHIBITOR, PREORGANIZATION, GLYCOSYLATION, BLOOD, hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 7 ? K N N 9 ? L N N 9 ? M N N 9 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP THRB_HUMAN P00734 ? 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 2 UNP THRB_HUMAN P00734 ? 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 3 UNP HIRV2_HIRME P09945 ? 3 GDFEEIPEEYLQ 61 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5JFD L 1 ? 36 ? P00734 328 ? 363 ? -4 17 2 2 5JFD H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 5JFD I 1 ? 12 ? P09945 61 ? 72 ? 554 565 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4590 ? 1 MORE -33 ? 1 'SSA (A^2)' 12780 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 AA2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 AA3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 AA4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 AA5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 AA6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 AA7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 AA8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 AA9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 HELX_P HELX_P10 AB1 PRO C 7 ? GLN C 12 ? PRO I 560 GLN I 565 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.046 ? ? covale1 covale one ? B ASN 53 ND2 ? G ? 1_555 E NAG . C1 ? ? H ASN 60 H NAG 302 1_555 ? ? ? ? ? ? ? 1.370 ? N-Glycosylation covale2 covale both ? C GLU 9 C ? ? ? 1_555 C TYS 10 N ? ? I GLU 562 I TYS 563 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? C TYS 10 C ? ? ? 1_555 C LEU 11 N ? ? I TYS 563 I LEU 564 1_555 ? ? ? ? ? ? ? 1.330 ? ? metalc1 metalc ? ? B LYS 174 O ? ? ? 1_555 F NA . NA ? ? H LYS 169 H NA 303 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc2 metalc ? ? B THR 177 O ? ? ? 1_555 F NA . NA ? ? H THR 172 H NA 303 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc3 metalc ? ? B PHE 215 O ? A ? 1_555 F NA . NA ? ? H PHE 204 H NA 303 4_556 ? ? ? ? ? ? ? 2.322 ? ? metalc4 metalc ? ? B ARG 233 O ? A ? 1_555 G NA . NA ? ? H ARG 221 H NA 304 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc5 metalc ? ? B LYS 236 O ? ? ? 1_555 G NA . NA ? ? H LYS 224 H NA 304 1_555 ? ? ? ? ? ? ? 2.454 ? ? metalc6 metalc ? ? F NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 303 H HOH 477 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc7 metalc ? ? F NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 303 H HOH 514 4_546 ? ? ? ? ? ? ? 2.414 ? ? metalc8 metalc ? ? F NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 303 H HOH 559 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc9 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 304 H HOH 469 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc10 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 304 H HOH 496 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc11 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 304 H HOH 525 1_555 ? ? ? ? ? ? ? 2.627 ? ? metalc12 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O ? ? H NA 304 H HOH 587 1_555 ? ? ? ? ? ? ? 2.327 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? B THR 177 ? H THR 172 ? 1_555 81.4 ? 2 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? B PHE 215 ? H PHE 204 A 1_555 18.1 ? 3 O ? B THR 177 ? H THR 172 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? B PHE 215 ? H PHE 204 A 1_555 90.2 ? 4 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 477 ? 1_555 70.5 ? 5 O ? B THR 177 ? H THR 172 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 477 ? 1_555 81.6 ? 6 O ? B PHE 215 ? H PHE 204 A 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 477 ? 1_555 55.9 ? 7 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 514 ? 4_546 172.7 ? 8 O ? B THR 177 ? H THR 172 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 514 ? 4_546 94.1 ? 9 O ? B PHE 215 ? H PHE 204 A 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 514 ? 4_546 157.9 ? 10 O ? L HOH . ? H HOH 477 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 514 ? 4_546 103.3 ? 11 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 559 ? 1_555 83.3 ? 12 O ? B THR 177 ? H THR 172 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 559 ? 1_555 164.7 ? 13 O ? B PHE 215 ? H PHE 204 A 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 559 ? 1_555 75.5 ? 14 O ? L HOH . ? H HOH 477 ? 1_555 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 559 ? 1_555 94.3 ? 15 O ? L HOH . ? H HOH 514 ? 4_546 NA ? F NA . ? H NA 303 ? 1_555 O ? L HOH . ? H HOH 559 ? 1_555 101.2 ? 16 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 93.6 ? 17 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 469 ? 1_555 106.7 ? 18 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 469 ? 1_555 158.3 ? 19 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 496 ? 1_555 159.9 ? 20 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 496 ? 1_555 69.3 ? 21 O ? L HOH . ? H HOH 469 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 496 ? 1_555 89.3 ? 22 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 525 ? 1_555 87.6 ? 23 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 525 ? 1_555 89.1 ? 24 O ? L HOH . ? H HOH 469 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 525 ? 1_555 84.3 ? 25 O ? L HOH . ? H HOH 496 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 525 ? 1_555 81.9 ? 26 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 587 ? 1_555 98.1 ? 27 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 587 ? 1_555 82.6 ? 28 O ? L HOH . ? H HOH 469 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 587 ? 1_555 101.4 ? 29 O ? L HOH . ? H HOH 496 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 587 ? 1_555 90.2 ? 30 O ? L HOH . ? H HOH 525 ? 1_555 NA ? G NA . ? H NA 304 ? 1_555 O ? L HOH . ? H HOH 587 ? 1_555 170.2 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 AA1 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 AA1 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 AA1 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 AA1 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 AA1 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 AA1 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 AA2 1 LYS B 77 ? SER B 79 ? LYS H 81 SER H 83 AA2 2 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 AA2 3 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA2 4 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 AA2 5 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 AA2 6 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 AA2 7 LEU B 81 ? ILE B 86 ? LEU H 85 ILE H 90 AA3 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 AA3 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 AA1 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 AA1 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 AA1 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 AA1 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 AA1 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 AA2 1 2 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 AA2 2 3 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 AA2 3 4 N LEU B 18 ? N LEU H 33 O LEU B 27 ? O LEU H 41 AA2 4 5 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 AA2 5 6 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 AA2 6 7 O LEU B 102 ? O LEU H 105 N TYR B 85 ? N TYR H 89 AA3 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 H ASN 60 G ? O5 H NAG 302 ? ? 1.88 2 1 O L HOH 212 ? ? O L HOH 221 ? ? 2.05 3 1 O H HOH 435 ? ? O H HOH 591 ? ? 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -131.10 -88.95 2 1 CYS H 42 ? ? 172.15 167.72 3 1 TYR H 60 A ? -154.32 84.23 4 1 ASN H 60 G ? -156.03 81.03 5 1 HIS H 71 ? ? -131.36 -62.14 6 1 ILE H 79 ? ? -128.99 -62.34 7 1 GLU H 97 A ? -109.92 -66.66 8 1 SER H 195 ? ? -37.18 133.44 # _pdbx_molecule_features.prd_id PRD_000667 _pdbx_molecule_features.name 'N~2~-(benzylsulfonyl)-D-arginyl-N-[2-(aminomethyl)-5-chlorobenzyl]-L-prolinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000667 _pdbx_molecule.asym_id D # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id I _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 563 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details 'modified residue' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 H ARG 75 ? B ARG 70 2 1 H HOH 416 ? L HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR -4 ? A THR 1 2 1 Y 1 L PHE -3 ? A PHE 2 3 1 Y 1 L GLY -2 ? A GLY 3 4 1 Y 1 L SER -1 ? A SER 4 5 1 Y 1 L GLY 0 ? A GLY 5 6 1 Y 1 H THR 148 A B THR 149 7 1 Y 1 H ALA 148 B B ALA 150 8 1 Y 1 H ASN 148 C B ASN 151 9 1 Y 1 H VAL 148 D B VAL 152 10 1 Y 1 H GLY 148 E B GLY 153 11 1 Y 1 H LYS 148 F B LYS 154 12 1 Y 1 H GLU 247 ? B GLU 259 13 1 Y 1 I GLY 554 ? C GLY 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2TS C1 C N N 1 2TS S19 S N N 2 2TS C55 C Y N 3 2TS C50 C Y N 4 2TS C51 C Y N 5 2TS C52 C Y N 6 2TS C53 C Y N 7 2TS C54 C Y N 8 2TS O27 O N N 9 2TS O28 O N N 10 2TS N29 N N N 11 2TS C28 C N R 12 2TS C42 C N N 13 2TS C43 C N N 14 2TS C44 C N N 15 2TS N45 N N N 16 2TS C34 C N N 17 2TS N39 N N N 18 2TS N38 N N N 19 2TS C27 C N N 20 2TS O38 O N N 21 2TS N25 N N N 22 2TS C26 C N S 23 2TS C21 C N N 24 2TS O39 O N N 25 2TS C22 C N N 26 2TS C23 C N N 27 2TS C24 C N N 28 2TS N19 N N N 29 2TS C10 C N N 30 2TS C6 C Y N 31 2TS C5 C Y N 32 2TS C32 C N N 33 2TS N33 N N N 34 2TS C4 C Y N 35 2TS C3 C Y N 36 2TS C2 C Y N 37 2TS CL1 CL N N 38 2TS C7 C Y N 39 2TS H1 H N N 40 2TS H1A H N N 41 2TS H50 H N N 42 2TS H51 H N N 43 2TS H52 H N N 44 2TS H53 H N N 45 2TS H54 H N N 46 2TS HN29 H N N 47 2TS H28 H N N 48 2TS H42 H N N 49 2TS H42A H N N 50 2TS H43 H N N 51 2TS H43A H N N 52 2TS H44 H N N 53 2TS H44A H N N 54 2TS HN45 H N N 55 2TS HN39 H N N 56 2TS HN3C H N N 57 2TS HN38 H N N 58 2TS H26 H N N 59 2TS H22 H N N 60 2TS H22A H N N 61 2TS H23 H N N 62 2TS H23A H N N 63 2TS H24 H N N 64 2TS H24A H N N 65 2TS HN19 H N N 66 2TS H10 H N N 67 2TS H10A H N N 68 2TS H32 H N N 69 2TS H32A H N N 70 2TS HN33 H N N 71 2TS HN3A H N N 72 2TS H4 H N N 73 2TS H3 H N N 74 2TS H7 H N N 75 ALA N N N N 76 ALA CA C N S 77 ALA C C N N 78 ALA O O N N 79 ALA CB C N N 80 ALA OXT O N N 81 ALA H H N N 82 ALA H2 H N N 83 ALA HA H N N 84 ALA HB1 H N N 85 ALA HB2 H N N 86 ALA HB3 H N N 87 ALA HXT H N N 88 ARG N N N N 89 ARG CA C N S 90 ARG C C N N 91 ARG O O N N 92 ARG CB C N N 93 ARG CG C N N 94 ARG CD C N N 95 ARG NE N N N 96 ARG CZ C N N 97 ARG NH1 N N N 98 ARG NH2 N N N 99 ARG OXT O N N 100 ARG H H N N 101 ARG H2 H N N 102 ARG HA H N N 103 ARG HB2 H N N 104 ARG HB3 H N N 105 ARG HG2 H N N 106 ARG HG3 H N N 107 ARG HD2 H N N 108 ARG HD3 H N N 109 ARG HE H N N 110 ARG HH11 H N N 111 ARG HH12 H N N 112 ARG HH21 H N N 113 ARG HH22 H N N 114 ARG HXT H N N 115 ASN N N N N 116 ASN CA C N S 117 ASN C C N N 118 ASN O O N N 119 ASN CB C N N 120 ASN CG C N N 121 ASN OD1 O N N 122 ASN ND2 N N N 123 ASN OXT O N N 124 ASN H H N N 125 ASN H2 H N N 126 ASN HA H N N 127 ASN HB2 H N N 128 ASN HB3 H N N 129 ASN HD21 H N N 130 ASN HD22 H N N 131 ASN HXT H N N 132 ASP N N N N 133 ASP CA C N S 134 ASP C C N N 135 ASP O O N N 136 ASP CB C N N 137 ASP CG C N N 138 ASP OD1 O N N 139 ASP OD2 O N N 140 ASP OXT O N N 141 ASP H H N N 142 ASP H2 H N N 143 ASP HA H N N 144 ASP HB2 H N N 145 ASP HB3 H N N 146 ASP HD2 H N N 147 ASP HXT H N N 148 CYS N N N N 149 CYS CA C N R 150 CYS C C N N 151 CYS O O N N 152 CYS CB C N N 153 CYS SG S N N 154 CYS OXT O N N 155 CYS H H N N 156 CYS H2 H N N 157 CYS HA H N N 158 CYS HB2 H N N 159 CYS HB3 H N N 160 CYS HG H N N 161 CYS HXT H N N 162 DMS S S N N 163 DMS O O N N 164 DMS C1 C N N 165 DMS C2 C N N 166 DMS H11 H N N 167 DMS H12 H N N 168 DMS H13 H N N 169 DMS H21 H N N 170 DMS H22 H N N 171 DMS H23 H N N 172 GLN N N N N 173 GLN CA C N S 174 GLN C C N N 175 GLN O O N N 176 GLN CB C N N 177 GLN CG C N N 178 GLN CD C N N 179 GLN OE1 O N N 180 GLN NE2 N N N 181 GLN OXT O N N 182 GLN H H N N 183 GLN H2 H N N 184 GLN HA H N N 185 GLN HB2 H N N 186 GLN HB3 H N N 187 GLN HG2 H N N 188 GLN HG3 H N N 189 GLN HE21 H N N 190 GLN HE22 H N N 191 GLN HXT H N N 192 GLU N N N N 193 GLU CA C N S 194 GLU C C N N 195 GLU O O N N 196 GLU CB C N N 197 GLU CG C N N 198 GLU CD C N N 199 GLU OE1 O N N 200 GLU OE2 O N N 201 GLU OXT O N N 202 GLU H H N N 203 GLU H2 H N N 204 GLU HA H N N 205 GLU HB2 H N N 206 GLU HB3 H N N 207 GLU HG2 H N N 208 GLU HG3 H N N 209 GLU HE2 H N N 210 GLU HXT H N N 211 GLY N N N N 212 GLY CA C N N 213 GLY C C N N 214 GLY O O N N 215 GLY OXT O N N 216 GLY H H N N 217 GLY H2 H N N 218 GLY HA2 H N N 219 GLY HA3 H N N 220 GLY HXT H N N 221 GOL C1 C N N 222 GOL O1 O N N 223 GOL C2 C N N 224 GOL O2 O N N 225 GOL C3 C N N 226 GOL O3 O N N 227 GOL H11 H N N 228 GOL H12 H N N 229 GOL HO1 H N N 230 GOL H2 H N N 231 GOL HO2 H N N 232 GOL H31 H N N 233 GOL H32 H N N 234 GOL HO3 H N N 235 HIS N N N N 236 HIS CA C N S 237 HIS C C N N 238 HIS O O N N 239 HIS CB C N N 240 HIS CG C Y N 241 HIS ND1 N Y N 242 HIS CD2 C Y N 243 HIS CE1 C Y N 244 HIS NE2 N Y N 245 HIS OXT O N N 246 HIS H H N N 247 HIS H2 H N N 248 HIS HA H N N 249 HIS HB2 H N N 250 HIS HB3 H N N 251 HIS HD1 H N N 252 HIS HD2 H N N 253 HIS HE1 H N N 254 HIS HE2 H N N 255 HIS HXT H N N 256 HOH O O N N 257 HOH H1 H N N 258 HOH H2 H N N 259 ILE N N N N 260 ILE CA C N S 261 ILE C C N N 262 ILE O O N N 263 ILE CB C N S 264 ILE CG1 C N N 265 ILE CG2 C N N 266 ILE CD1 C N N 267 ILE OXT O N N 268 ILE H H N N 269 ILE H2 H N N 270 ILE HA H N N 271 ILE HB H N N 272 ILE HG12 H N N 273 ILE HG13 H N N 274 ILE HG21 H N N 275 ILE HG22 H N N 276 ILE HG23 H N N 277 ILE HD11 H N N 278 ILE HD12 H N N 279 ILE HD13 H N N 280 ILE HXT H N N 281 LEU N N N N 282 LEU CA C N S 283 LEU C C N N 284 LEU O O N N 285 LEU CB C N N 286 LEU CG C N N 287 LEU CD1 C N N 288 LEU CD2 C N N 289 LEU OXT O N N 290 LEU H H N N 291 LEU H2 H N N 292 LEU HA H N N 293 LEU HB2 H N N 294 LEU HB3 H N N 295 LEU HG H N N 296 LEU HD11 H N N 297 LEU HD12 H N N 298 LEU HD13 H N N 299 LEU HD21 H N N 300 LEU HD22 H N N 301 LEU HD23 H N N 302 LEU HXT H N N 303 LYS N N N N 304 LYS CA C N S 305 LYS C C N N 306 LYS O O N N 307 LYS CB C N N 308 LYS CG C N N 309 LYS CD C N N 310 LYS CE C N N 311 LYS NZ N N N 312 LYS OXT O N N 313 LYS H H N N 314 LYS H2 H N N 315 LYS HA H N N 316 LYS HB2 H N N 317 LYS HB3 H N N 318 LYS HG2 H N N 319 LYS HG3 H N N 320 LYS HD2 H N N 321 LYS HD3 H N N 322 LYS HE2 H N N 323 LYS HE3 H N N 324 LYS HZ1 H N N 325 LYS HZ2 H N N 326 LYS HZ3 H N N 327 LYS HXT H N N 328 MET N N N N 329 MET CA C N S 330 MET C C N N 331 MET O O N N 332 MET CB C N N 333 MET CG C N N 334 MET SD S N N 335 MET CE C N N 336 MET OXT O N N 337 MET H H N N 338 MET H2 H N N 339 MET HA H N N 340 MET HB2 H N N 341 MET HB3 H N N 342 MET HG2 H N N 343 MET HG3 H N N 344 MET HE1 H N N 345 MET HE2 H N N 346 MET HE3 H N N 347 MET HXT H N N 348 NA NA NA N N 349 NAG C1 C N R 350 NAG C2 C N R 351 NAG C3 C N R 352 NAG C4 C N S 353 NAG C5 C N R 354 NAG C6 C N N 355 NAG C7 C N N 356 NAG C8 C N N 357 NAG N2 N N N 358 NAG O1 O N N 359 NAG O3 O N N 360 NAG O4 O N N 361 NAG O5 O N N 362 NAG O6 O N N 363 NAG O7 O N N 364 NAG H1 H N N 365 NAG H2 H N N 366 NAG H3 H N N 367 NAG H4 H N N 368 NAG H5 H N N 369 NAG H61 H N N 370 NAG H62 H N N 371 NAG H81 H N N 372 NAG H82 H N N 373 NAG H83 H N N 374 NAG HN2 H N N 375 NAG HO1 H N N 376 NAG HO3 H N N 377 NAG HO4 H N N 378 NAG HO6 H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 TYS N N N N 502 TYS CA C N S 503 TYS CB C N N 504 TYS CG C Y N 505 TYS CD1 C Y N 506 TYS CD2 C Y N 507 TYS CE1 C Y N 508 TYS CE2 C Y N 509 TYS CZ C Y N 510 TYS OH O N N 511 TYS S S N N 512 TYS O1 O N N 513 TYS O2 O N N 514 TYS O3 O N N 515 TYS C C N N 516 TYS O O N N 517 TYS OXT O N N 518 TYS H H N N 519 TYS H2 H N N 520 TYS HA H N N 521 TYS HB2 H N N 522 TYS HB3 H N N 523 TYS HD1 H N N 524 TYS HD2 H N N 525 TYS HE1 H N N 526 TYS HE2 H N N 527 TYS HO3 H N N 528 TYS HXT H N N 529 VAL N N N N 530 VAL CA C N S 531 VAL C C N N 532 VAL O O N N 533 VAL CB C N N 534 VAL CG1 C N N 535 VAL CG2 C N N 536 VAL OXT O N N 537 VAL H H N N 538 VAL H2 H N N 539 VAL HA H N N 540 VAL HB H N N 541 VAL HG11 H N N 542 VAL HG12 H N N 543 VAL HG13 H N N 544 VAL HG21 H N N 545 VAL HG22 H N N 546 VAL HG23 H N N 547 VAL HXT H N N 548 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2TS C50 C51 doub Y N 1 2TS C50 C55 sing Y N 2 2TS C51 C52 sing Y N 3 2TS C52 C53 doub Y N 4 2TS C53 C54 sing Y N 5 2TS C54 C55 doub Y N 6 2TS C55 C1 sing N N 7 2TS C1 S19 sing N N 8 2TS S19 N29 sing N N 9 2TS S19 O27 doub N N 10 2TS S19 O28 doub N N 11 2TS N29 C28 sing N N 12 2TS C28 C27 sing N N 13 2TS C28 C42 sing N N 14 2TS C27 N25 sing N N 15 2TS C27 O38 doub N N 16 2TS N25 C26 sing N N 17 2TS N25 C24 sing N N 18 2TS C26 C21 sing N N 19 2TS C26 C22 sing N N 20 2TS C21 N19 sing N N 21 2TS C21 O39 doub N N 22 2TS N19 C10 sing N N 23 2TS C10 C6 sing N N 24 2TS C6 C5 doub Y N 25 2TS C6 C7 sing Y N 26 2TS C5 C32 sing N N 27 2TS C5 C4 sing Y N 28 2TS C32 N33 sing N N 29 2TS C4 C3 doub Y N 30 2TS C3 C2 sing Y N 31 2TS C2 CL1 sing N N 32 2TS C2 C7 doub Y N 33 2TS C22 C23 sing N N 34 2TS C23 C24 sing N N 35 2TS C42 C43 sing N N 36 2TS C43 C44 sing N N 37 2TS C44 N45 sing N N 38 2TS N45 C34 sing N N 39 2TS C34 N38 doub N N 40 2TS C34 N39 sing N N 41 2TS C50 H50 sing N N 42 2TS C51 H51 sing N N 43 2TS C52 H52 sing N N 44 2TS C53 H53 sing N N 45 2TS C54 H54 sing N N 46 2TS C1 H1 sing N N 47 2TS C1 H1A sing N N 48 2TS N29 HN29 sing N N 49 2TS C28 H28 sing N N 50 2TS C26 H26 sing N N 51 2TS N19 HN19 sing N N 52 2TS C10 H10 sing N N 53 2TS C10 H10A sing N N 54 2TS C32 H32 sing N N 55 2TS C32 H32A sing N N 56 2TS N33 HN33 sing N N 57 2TS N33 HN3A sing N N 58 2TS C4 H4 sing N N 59 2TS C3 H3 sing N N 60 2TS C7 H7 sing N N 61 2TS C22 H22 sing N N 62 2TS C22 H22A sing N N 63 2TS C23 H23 sing N N 64 2TS C23 H23A sing N N 65 2TS C24 H24 sing N N 66 2TS C24 H24A sing N N 67 2TS C42 H42 sing N N 68 2TS C42 H42A sing N N 69 2TS C43 H43 sing N N 70 2TS C43 H43A sing N N 71 2TS C44 H44 sing N N 72 2TS C44 H44A sing N N 73 2TS N38 HN38 sing N N 74 2TS N45 HN45 sing N N 75 2TS N39 HN39 sing N N 76 2TS N39 HN3C sing N N 77 ALA N CA sing N N 78 ALA N H sing N N 79 ALA N H2 sing N N 80 ALA CA C sing N N 81 ALA CA CB sing N N 82 ALA CA HA sing N N 83 ALA C O doub N N 84 ALA C OXT sing N N 85 ALA CB HB1 sing N N 86 ALA CB HB2 sing N N 87 ALA CB HB3 sing N N 88 ALA OXT HXT sing N N 89 ARG N CA sing N N 90 ARG N H sing N N 91 ARG N H2 sing N N 92 ARG CA C sing N N 93 ARG CA CB sing N N 94 ARG CA HA sing N N 95 ARG C O doub N N 96 ARG C OXT sing N N 97 ARG CB CG sing N N 98 ARG CB HB2 sing N N 99 ARG CB HB3 sing N N 100 ARG CG CD sing N N 101 ARG CG HG2 sing N N 102 ARG CG HG3 sing N N 103 ARG CD NE sing N N 104 ARG CD HD2 sing N N 105 ARG CD HD3 sing N N 106 ARG NE CZ sing N N 107 ARG NE HE sing N N 108 ARG CZ NH1 sing N N 109 ARG CZ NH2 doub N N 110 ARG NH1 HH11 sing N N 111 ARG NH1 HH12 sing N N 112 ARG NH2 HH21 sing N N 113 ARG NH2 HH22 sing N N 114 ARG OXT HXT sing N N 115 ASN N CA sing N N 116 ASN N H sing N N 117 ASN N H2 sing N N 118 ASN CA C sing N N 119 ASN CA CB sing N N 120 ASN CA HA sing N N 121 ASN C O doub N N 122 ASN C OXT sing N N 123 ASN CB CG sing N N 124 ASN CB HB2 sing N N 125 ASN CB HB3 sing N N 126 ASN CG OD1 doub N N 127 ASN CG ND2 sing N N 128 ASN ND2 HD21 sing N N 129 ASN ND2 HD22 sing N N 130 ASN OXT HXT sing N N 131 ASP N CA sing N N 132 ASP N H sing N N 133 ASP N H2 sing N N 134 ASP CA C sing N N 135 ASP CA CB sing N N 136 ASP CA HA sing N N 137 ASP C O doub N N 138 ASP C OXT sing N N 139 ASP CB CG sing N N 140 ASP CB HB2 sing N N 141 ASP CB HB3 sing N N 142 ASP CG OD1 doub N N 143 ASP CG OD2 sing N N 144 ASP OD2 HD2 sing N N 145 ASP OXT HXT sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 DMS S O doub N N 160 DMS S C1 sing N N 161 DMS S C2 sing N N 162 DMS C1 H11 sing N N 163 DMS C1 H12 sing N N 164 DMS C1 H13 sing N N 165 DMS C2 H21 sing N N 166 DMS C2 H22 sing N N 167 DMS C2 H23 sing N N 168 GLN N CA sing N N 169 GLN N H sing N N 170 GLN N H2 sing N N 171 GLN CA C sing N N 172 GLN CA CB sing N N 173 GLN CA HA sing N N 174 GLN C O doub N N 175 GLN C OXT sing N N 176 GLN CB CG sing N N 177 GLN CB HB2 sing N N 178 GLN CB HB3 sing N N 179 GLN CG CD sing N N 180 GLN CG HG2 sing N N 181 GLN CG HG3 sing N N 182 GLN CD OE1 doub N N 183 GLN CD NE2 sing N N 184 GLN NE2 HE21 sing N N 185 GLN NE2 HE22 sing N N 186 GLN OXT HXT sing N N 187 GLU N CA sing N N 188 GLU N H sing N N 189 GLU N H2 sing N N 190 GLU CA C sing N N 191 GLU CA CB sing N N 192 GLU CA HA sing N N 193 GLU C O doub N N 194 GLU C OXT sing N N 195 GLU CB CG sing N N 196 GLU CB HB2 sing N N 197 GLU CB HB3 sing N N 198 GLU CG CD sing N N 199 GLU CG HG2 sing N N 200 GLU CG HG3 sing N N 201 GLU CD OE1 doub N N 202 GLU CD OE2 sing N N 203 GLU OE2 HE2 sing N N 204 GLU OXT HXT sing N N 205 GLY N CA sing N N 206 GLY N H sing N N 207 GLY N H2 sing N N 208 GLY CA C sing N N 209 GLY CA HA2 sing N N 210 GLY CA HA3 sing N N 211 GLY C O doub N N 212 GLY C OXT sing N N 213 GLY OXT HXT sing N N 214 GOL C1 O1 sing N N 215 GOL C1 C2 sing N N 216 GOL C1 H11 sing N N 217 GOL C1 H12 sing N N 218 GOL O1 HO1 sing N N 219 GOL C2 O2 sing N N 220 GOL C2 C3 sing N N 221 GOL C2 H2 sing N N 222 GOL O2 HO2 sing N N 223 GOL C3 O3 sing N N 224 GOL C3 H31 sing N N 225 GOL C3 H32 sing N N 226 GOL O3 HO3 sing N N 227 HIS N CA sing N N 228 HIS N H sing N N 229 HIS N H2 sing N N 230 HIS CA C sing N N 231 HIS CA CB sing N N 232 HIS CA HA sing N N 233 HIS C O doub N N 234 HIS C OXT sing N N 235 HIS CB CG sing N N 236 HIS CB HB2 sing N N 237 HIS CB HB3 sing N N 238 HIS CG ND1 sing Y N 239 HIS CG CD2 doub Y N 240 HIS ND1 CE1 doub Y N 241 HIS ND1 HD1 sing N N 242 HIS CD2 NE2 sing Y N 243 HIS CD2 HD2 sing N N 244 HIS CE1 NE2 sing Y N 245 HIS CE1 HE1 sing N N 246 HIS NE2 HE2 sing N N 247 HIS OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 NAG C1 C2 sing N N 336 NAG C1 O1 sing N N 337 NAG C1 O5 sing N N 338 NAG C1 H1 sing N N 339 NAG C2 C3 sing N N 340 NAG C2 N2 sing N N 341 NAG C2 H2 sing N N 342 NAG C3 C4 sing N N 343 NAG C3 O3 sing N N 344 NAG C3 H3 sing N N 345 NAG C4 C5 sing N N 346 NAG C4 O4 sing N N 347 NAG C4 H4 sing N N 348 NAG C5 C6 sing N N 349 NAG C5 O5 sing N N 350 NAG C5 H5 sing N N 351 NAG C6 O6 sing N N 352 NAG C6 H61 sing N N 353 NAG C6 H62 sing N N 354 NAG C7 C8 sing N N 355 NAG C7 N2 sing N N 356 NAG C7 O7 doub N N 357 NAG C8 H81 sing N N 358 NAG C8 H82 sing N N 359 NAG C8 H83 sing N N 360 NAG N2 HN2 sing N N 361 NAG O1 HO1 sing N N 362 NAG O3 HO3 sing N N 363 NAG O4 HO4 sing N N 364 NAG O6 HO6 sing N N 365 PHE N CA sing N N 366 PHE N H sing N N 367 PHE N H2 sing N N 368 PHE CA C sing N N 369 PHE CA CB sing N N 370 PHE CA HA sing N N 371 PHE C O doub N N 372 PHE C OXT sing N N 373 PHE CB CG sing N N 374 PHE CB HB2 sing N N 375 PHE CB HB3 sing N N 376 PHE CG CD1 doub Y N 377 PHE CG CD2 sing Y N 378 PHE CD1 CE1 sing Y N 379 PHE CD1 HD1 sing N N 380 PHE CD2 CE2 doub Y N 381 PHE CD2 HD2 sing N N 382 PHE CE1 CZ doub Y N 383 PHE CE1 HE1 sing N N 384 PHE CE2 CZ sing Y N 385 PHE CE2 HE2 sing N N 386 PHE CZ HZ sing N N 387 PHE OXT HXT sing N N 388 PRO N CA sing N N 389 PRO N CD sing N N 390 PRO N H sing N N 391 PRO CA C sing N N 392 PRO CA CB sing N N 393 PRO CA HA sing N N 394 PRO C O doub N N 395 PRO C OXT sing N N 396 PRO CB CG sing N N 397 PRO CB HB2 sing N N 398 PRO CB HB3 sing N N 399 PRO CG CD sing N N 400 PRO CG HG2 sing N N 401 PRO CG HG3 sing N N 402 PRO CD HD2 sing N N 403 PRO CD HD3 sing N N 404 PRO OXT HXT sing N N 405 SER N CA sing N N 406 SER N H sing N N 407 SER N H2 sing N N 408 SER CA C sing N N 409 SER CA CB sing N N 410 SER CA HA sing N N 411 SER C O doub N N 412 SER C OXT sing N N 413 SER CB OG sing N N 414 SER CB HB2 sing N N 415 SER CB HB3 sing N N 416 SER OG HG sing N N 417 SER OXT HXT sing N N 418 THR N CA sing N N 419 THR N H sing N N 420 THR N H2 sing N N 421 THR CA C sing N N 422 THR CA CB sing N N 423 THR CA HA sing N N 424 THR C O doub N N 425 THR C OXT sing N N 426 THR CB OG1 sing N N 427 THR CB CG2 sing N N 428 THR CB HB sing N N 429 THR OG1 HG1 sing N N 430 THR CG2 HG21 sing N N 431 THR CG2 HG22 sing N N 432 THR CG2 HG23 sing N N 433 THR OXT HXT sing N N 434 TRP N CA sing N N 435 TRP N H sing N N 436 TRP N H2 sing N N 437 TRP CA C sing N N 438 TRP CA CB sing N N 439 TRP CA HA sing N N 440 TRP C O doub N N 441 TRP C OXT sing N N 442 TRP CB CG sing N N 443 TRP CB HB2 sing N N 444 TRP CB HB3 sing N N 445 TRP CG CD1 doub Y N 446 TRP CG CD2 sing Y N 447 TRP CD1 NE1 sing Y N 448 TRP CD1 HD1 sing N N 449 TRP CD2 CE2 doub Y N 450 TRP CD2 CE3 sing Y N 451 TRP NE1 CE2 sing Y N 452 TRP NE1 HE1 sing N N 453 TRP CE2 CZ2 sing Y N 454 TRP CE3 CZ3 doub Y N 455 TRP CE3 HE3 sing N N 456 TRP CZ2 CH2 doub Y N 457 TRP CZ2 HZ2 sing N N 458 TRP CZ3 CH2 sing Y N 459 TRP CZ3 HZ3 sing N N 460 TRP CH2 HH2 sing N N 461 TRP OXT HXT sing N N 462 TYR N CA sing N N 463 TYR N H sing N N 464 TYR N H2 sing N N 465 TYR CA C sing N N 466 TYR CA CB sing N N 467 TYR CA HA sing N N 468 TYR C O doub N N 469 TYR C OXT sing N N 470 TYR CB CG sing N N 471 TYR CB HB2 sing N N 472 TYR CB HB3 sing N N 473 TYR CG CD1 doub Y N 474 TYR CG CD2 sing Y N 475 TYR CD1 CE1 sing Y N 476 TYR CD1 HD1 sing N N 477 TYR CD2 CE2 doub Y N 478 TYR CD2 HD2 sing N N 479 TYR CE1 CZ doub Y N 480 TYR CE1 HE1 sing N N 481 TYR CE2 CZ sing Y N 482 TYR CE2 HE2 sing N N 483 TYR CZ OH sing N N 484 TYR OH HH sing N N 485 TYR OXT HXT sing N N 486 TYS N CA sing N N 487 TYS N H sing N N 488 TYS N H2 sing N N 489 TYS CA CB sing N N 490 TYS CA C sing N N 491 TYS CA HA sing N N 492 TYS CB CG sing N N 493 TYS CB HB2 sing N N 494 TYS CB HB3 sing N N 495 TYS CG CD1 doub Y N 496 TYS CG CD2 sing Y N 497 TYS CD1 CE1 sing Y N 498 TYS CD1 HD1 sing N N 499 TYS CD2 CE2 doub Y N 500 TYS CD2 HD2 sing N N 501 TYS CE1 CZ doub Y N 502 TYS CE1 HE1 sing N N 503 TYS CE2 CZ sing Y N 504 TYS CE2 HE2 sing N N 505 TYS CZ OH sing N N 506 TYS OH S sing N N 507 TYS S O1 doub N N 508 TYS S O2 doub N N 509 TYS S O3 sing N N 510 TYS O3 HO3 sing N N 511 TYS C O doub N N 512 TYS C OXT sing N N 513 TYS OXT HXT sing N N 514 VAL N CA sing N N 515 VAL N H sing N N 516 VAL N H2 sing N N 517 VAL CA C sing N N 518 VAL CA CB sing N N 519 VAL CA HA sing N N 520 VAL C O doub N N 521 VAL C OXT sing N N 522 VAL CB CG1 sing N N 523 VAL CB CG2 sing N N 524 VAL CB HB sing N N 525 VAL CG1 HG11 sing N N 526 VAL CG1 HG12 sing N N 527 VAL CG1 HG13 sing N N 528 VAL CG2 HG21 sing N N 529 VAL CG2 HG22 sing N N 530 VAL CG2 HG23 sing N N 531 VAL OXT HXT sing N N 532 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1H8D _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5JFD _atom_sites.fract_transf_matrix[1][1] 0.014416 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002488 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013988 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014068 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N NA O S # loop_