HEADER SIGNALING PROTEIN 19-APR-16 5JG4 TITLE STRUCTURE OF THE EFFECTOR PROTEIN LPIR1 (LPG0634) FROM LEGIONELLA TITLE 2 PNEUMOPHILA COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFFECTOR PROTEIN LPIR1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: LPYMG_00644; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEGIONELLA PNEUMOPHILA, BACTERIAL EFFECTOR, PHOSPHATE BINDING, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.BEYRAKHOVA,K.VAN STRAATEN,M.CYGLER REVDAT 4 06-MAR-24 5JG4 1 JRNL REMARK REVDAT 3 03-AUG-16 5JG4 1 JRNL REVDAT 2 08-JUN-16 5JG4 1 JRNL REVDAT 1 04-MAY-16 5JG4 0 JRNL AUTH K.A.BEYRAKHOVA,K.VAN STRAATEN,L.LI,M.T.BONIECKI, JRNL AUTH 2 D.H.ANDERSON,M.CYGLER JRNL TITL STRUCTURAL AND FUNCTIONAL INVESTIGATIONS OF THE EFFECTOR JRNL TITL 2 PROTEIN LPIR1 FROM LEGIONELLA PNEUMOPHILA. JRNL REF J.BIOL.CHEM. V. 291 15767 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27226543 JRNL DOI 10.1074/JBC.M115.708701 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5387 - 6.1671 1.00 2914 154 0.1846 0.2092 REMARK 3 2 6.1671 - 4.8965 1.00 2781 146 0.2017 0.2635 REMARK 3 3 4.8965 - 4.2780 1.00 2761 146 0.1560 0.1762 REMARK 3 4 4.2780 - 3.8871 1.00 2728 143 0.1577 0.1978 REMARK 3 5 3.8871 - 3.6085 1.00 2729 144 0.1734 0.2442 REMARK 3 6 3.6085 - 3.3958 1.00 2720 143 0.1881 0.2014 REMARK 3 7 3.3958 - 3.2258 1.00 2692 142 0.1886 0.1980 REMARK 3 8 3.2258 - 3.0854 1.00 2709 143 0.1877 0.2409 REMARK 3 9 3.0854 - 2.9667 1.00 2718 143 0.2059 0.2707 REMARK 3 10 2.9667 - 2.8643 1.00 2695 141 0.2045 0.2215 REMARK 3 11 2.8643 - 2.7747 1.00 2681 142 0.1902 0.2609 REMARK 3 12 2.7747 - 2.6954 1.00 2675 140 0.1973 0.2450 REMARK 3 13 2.6954 - 2.6245 1.00 2683 141 0.2105 0.2560 REMARK 3 14 2.6245 - 2.5605 1.00 2688 142 0.2123 0.2288 REMARK 3 15 2.5605 - 2.5023 1.00 2689 142 0.2114 0.2646 REMARK 3 16 2.5023 - 2.4490 1.00 2672 140 0.2063 0.2559 REMARK 3 17 2.4490 - 2.4000 1.00 2665 140 0.2250 0.2599 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6156 REMARK 3 ANGLE : 0.527 8322 REMARK 3 CHIRALITY : 0.038 982 REMARK 3 PLANARITY : 0.003 1070 REMARK 3 DIHEDRAL : 15.298 3796 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JG4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.16200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRATE PH 4.0, 10% PEG 6000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.92000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.72500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.12000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.72500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.92000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.12000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 3 REMARK 465 ASN A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 401 REMARK 465 LYS A 402 REMARK 465 LYS A 403 REMARK 465 GLU A 404 REMARK 465 GLY A 405 REMARK 465 TYR A 406 REMARK 465 SER A 407 REMARK 465 ILE A 408 REMARK 465 ALA A 409 REMARK 465 SER A 410 REMARK 465 SER A 411 REMARK 465 VAL A 412 REMARK 465 THR A 413 REMARK 465 GLY A 414 REMARK 465 TYR A 415 REMARK 465 VAL A 416 REMARK 465 GLY A 417 REMARK 465 SER A 418 REMARK 465 TRP A 419 REMARK 465 PHE A 420 REMARK 465 LYS A 421 REMARK 465 LYS A 422 REMARK 465 ALA A 423 REMARK 465 PRO A 424 REMARK 465 SER A 425 REMARK 465 MET A 426 REMARK 465 SER A 427 REMARK 465 GLU A 428 REMARK 465 GLU A 429 REMARK 465 ASP A 430 REMARK 465 GLU A 431 REMARK 465 GLU A 432 REMARK 465 ASP A 433 REMARK 465 ASP A 434 REMARK 465 LEU A 435 REMARK 465 LYS A 436 REMARK 465 ASP A 437 REMARK 465 GLN A 438 REMARK 465 ASN A 439 REMARK 465 THR A 440 REMARK 465 ALA A 441 REMARK 465 GLU A 442 REMARK 465 GLU A 443 REMARK 465 THR A 444 REMARK 465 SER A 445 REMARK 465 LYS A 446 REMARK 465 PRO A 447 REMARK 465 THR A 448 REMARK 465 VAL A 449 REMARK 465 SER B 3 REMARK 465 ASN B 4 REMARK 465 ALA B 5 REMARK 465 PRO B 401 REMARK 465 LYS B 402 REMARK 465 LYS B 403 REMARK 465 GLU B 404 REMARK 465 GLY B 405 REMARK 465 TYR B 406 REMARK 465 SER B 407 REMARK 465 ILE B 408 REMARK 465 ALA B 409 REMARK 465 SER B 410 REMARK 465 SER B 411 REMARK 465 VAL B 412 REMARK 465 THR B 413 REMARK 465 GLY B 414 REMARK 465 TYR B 415 REMARK 465 VAL B 416 REMARK 465 GLY B 417 REMARK 465 SER B 418 REMARK 465 TRP B 419 REMARK 465 PHE B 420 REMARK 465 LYS B 421 REMARK 465 LYS B 422 REMARK 465 ALA B 423 REMARK 465 PRO B 424 REMARK 465 SER B 425 REMARK 465 MET B 426 REMARK 465 SER B 427 REMARK 465 GLU B 428 REMARK 465 GLU B 429 REMARK 465 ASP B 430 REMARK 465 GLU B 431 REMARK 465 GLU B 432 REMARK 465 ASP B 433 REMARK 465 ASP B 434 REMARK 465 LEU B 435 REMARK 465 LYS B 436 REMARK 465 ASP B 437 REMARK 465 GLN B 438 REMARK 465 ASN B 439 REMARK 465 THR B 440 REMARK 465 ALA B 441 REMARK 465 GLU B 442 REMARK 465 GLU B 443 REMARK 465 THR B 444 REMARK 465 SER B 445 REMARK 465 LYS B 446 REMARK 465 PRO B 447 REMARK 465 THR B 448 REMARK 465 VAL B 449 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 33 CG OD1 OD2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 ASP A 61 CG OD1 OD2 REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 ARG A 66 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 91 CG CD NE CZ NH1 NH2 REMARK 470 MET A 93 CG SD CE REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 GLN A 262 CG CD OE1 NE2 REMARK 470 GLN A 342 CG CD OE1 NE2 REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 LYS A 346 CE NZ REMARK 470 LYS A 349 CG CD CE NZ REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 ASP B 21 CG OD1 OD2 REMARK 470 LYS B 24 CG CD CE NZ REMARK 470 GLN B 28 CG CD OE1 NE2 REMARK 470 ARG B 29 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 ASP B 33 CG OD1 OD2 REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 ASP B 37 CG OD1 OD2 REMARK 470 LEU B 38 CG CD1 CD2 REMARK 470 GLU B 57 CG CD OE1 OE2 REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 91 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 92 CG1 CG2 REMARK 470 MET B 93 CG SD CE REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 LYS B 96 CG CD CE NZ REMARK 470 GLU B 97 CG CD OE1 OE2 REMARK 470 ASN B 98 CG OD1 ND2 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 SER B 139 OG REMARK 470 LEU B 146 CG CD1 CD2 REMARK 470 GLU B 149 CG CD OE1 OE2 REMARK 470 GLN B 153 CG CD OE1 NE2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 ASN B 177 CG OD1 ND2 REMARK 470 LYS B 187 CG CD CE NZ REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 HIS B 196 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 LYS B 199 CG CD CE NZ REMARK 470 GLN B 262 CG CD OE1 NE2 REMARK 470 ARG B 339 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 GLN B 342 CG CD OE1 NE2 REMARK 470 ASN B 344 CG OD1 ND2 REMARK 470 LYS B 345 CG CD CE NZ REMARK 470 LYS B 349 CG CD CE NZ REMARK 470 GLU B 354 CG CD OE1 OE2 REMARK 470 LYS B 393 CG CD CE NZ REMARK 470 LYS B 400 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 229 O HOH A 601 1.99 REMARK 500 OE1 GLN B 55 NZ LYS B 59 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 93 -24.31 85.68 REMARK 500 ALA A 184 55.63 -102.08 REMARK 500 LYS A 210 -62.28 79.75 REMARK 500 GLU B 97 1.57 -67.21 REMARK 500 ALA B 184 54.99 -103.19 REMARK 500 LYS B 210 -58.23 75.85 REMARK 500 ALA B 398 30.93 -84.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FIA RELATED DB: PDB DBREF1 5JG4 A 6 449 UNP A0A0C9P234_LEGPN DBREF2 5JG4 A A0A0C9P234 2 445 DBREF1 5JG4 B 6 449 UNP A0A0C9P234_LEGPN DBREF2 5JG4 B A0A0C9P234 2 445 SEQADV 5JG4 SER A 3 UNP A0A0C9P23 EXPRESSION TAG SEQADV 5JG4 ASN A 4 UNP A0A0C9P23 EXPRESSION TAG SEQADV 5JG4 ALA A 5 UNP A0A0C9P23 EXPRESSION TAG SEQADV 5JG4 SER B 3 UNP A0A0C9P23 EXPRESSION TAG SEQADV 5JG4 ASN B 4 UNP A0A0C9P23 EXPRESSION TAG SEQADV 5JG4 ALA B 5 UNP A0A0C9P23 EXPRESSION TAG SEQRES 1 A 447 SER ASN ALA THR PHE VAL LEU LYS GLU PHE ASP ALA LEU SEQRES 2 A 447 LYS SER HIS PHE ASN ASP THR VAL LYS ILE ILE LEU GLN SEQRES 3 A 447 ARG GLU LYS LYS ASP LYS ILE GLU ASP LEU PRO ASN PRO SEQRES 4 A 447 ARG LYS GLU GLU LEU GLN PHE LEU THR ALA VAL LEU ASN SEQRES 5 A 447 GLN LEU GLU ALA LYS ILE ASP GLU LEU LYS PRO ARG SER SEQRES 6 A 447 LEU ALA SER TYR VAL HIS VAL PHE TYR GLY ALA MET LEU SEQRES 7 A 447 LEU VAL CYS LYS ASP VAL GLU ASN ASN LEU ARG VAL MET SEQRES 8 A 447 GLU LYS LYS GLU ASN SER LEU LEU PHE THR ARG LEU MET SEQRES 9 A 447 ASP GLY MET GLY ILE SER ASP GLU ASN ILE PRO THR SER SEQRES 10 A 447 GLU GLN ASN ILE MET PHE TYR ARG GLY LEU ASN LYS PHE SEQRES 11 A 447 LEU ASN PHE ILE TYR GLU SER ASN ASP SER ARG LYS GLY SEQRES 12 A 447 LEU LYS LYS GLU HIS PHE LEU GLN VAL LEU SER LEU LYS SEQRES 13 A 447 LYS ILE TYR SER LEU ALA LYS LEU SER TYR GLU GLN GLU SEQRES 14 A 447 GLU ALA ALA GLU ASN ASN ALA LEU ALA LYS LEU THR ALA SEQRES 15 A 447 ASP GLY LYS THR LYS ALA ASN ALA ASN SER PHE HIS VAL SEQRES 16 A 447 GLU LYS PRO ILE ASP SER SER ILE VAL GLU GLN PHE LYS SEQRES 17 A 447 SER TRP ASP GLU MET LYS GLY ALA LEU HIS GLN LEU ILE SEQRES 18 A 447 LEU ASP GLU LEU SER ASP LYS ASN VAL ALA LYS ILE SER SEQRES 19 A 447 ALA LEU SER GLN ALA ARG SER ALA GLN LEU LYS PHE LEU SEQRES 20 A 447 GLN THR MET ALA GLU GLN LEU ASP LYS ILE PRO ASN GLN SEQRES 21 A 447 SER LEU GLU PRO SER GLU LYS MET ALA ILE LEU ALA GLY SEQRES 22 A 447 ALA MET TYR ILE VAL ARG GLY GLN ILE ALA GLN GLU TYR SEQRES 23 A 447 GLY LYS ASP PRO LEU SER ASN ASP LYS ILE SER ALA THR SEQRES 24 A 447 VAL ILE HIS THR GLY LEU SER THR ILE LEU HIS ALA ASN SEQRES 25 A 447 ALA ASP CYS CYS GLU ASP LYS GLU VAL LEU ILE ALA ALA SEQRES 26 A 447 ALA ASN LYS PHE ILE ARG HIS MET VAL ILE GLU ARG PRO SEQRES 27 A 447 GLU GLN SER ASN LYS LYS ILE THR LYS GLU SER VAL ARG SEQRES 28 A 447 GLU ASN ASN MET PHE SER ASP ILE ALA GLY PHE GLN LEU SEQRES 29 A 447 ILE SER VAL LEU THR LEU ILE GLN ASN MET ILE LYS THR SEQRES 30 A 447 CYS ARG THR ASP ALA ILE GLU ALA CYS VAL THR LYS ARG SEQRES 31 A 447 LYS GLU GLU LEU GLU ALA LEU LYS PRO LYS LYS GLU GLY SEQRES 32 A 447 TYR SER ILE ALA SER SER VAL THR GLY TYR VAL GLY SER SEQRES 33 A 447 TRP PHE LYS LYS ALA PRO SER MET SER GLU GLU ASP GLU SEQRES 34 A 447 GLU ASP ASP LEU LYS ASP GLN ASN THR ALA GLU GLU THR SEQRES 35 A 447 SER LYS PRO THR VAL SEQRES 1 B 447 SER ASN ALA THR PHE VAL LEU LYS GLU PHE ASP ALA LEU SEQRES 2 B 447 LYS SER HIS PHE ASN ASP THR VAL LYS ILE ILE LEU GLN SEQRES 3 B 447 ARG GLU LYS LYS ASP LYS ILE GLU ASP LEU PRO ASN PRO SEQRES 4 B 447 ARG LYS GLU GLU LEU GLN PHE LEU THR ALA VAL LEU ASN SEQRES 5 B 447 GLN LEU GLU ALA LYS ILE ASP GLU LEU LYS PRO ARG SER SEQRES 6 B 447 LEU ALA SER TYR VAL HIS VAL PHE TYR GLY ALA MET LEU SEQRES 7 B 447 LEU VAL CYS LYS ASP VAL GLU ASN ASN LEU ARG VAL MET SEQRES 8 B 447 GLU LYS LYS GLU ASN SER LEU LEU PHE THR ARG LEU MET SEQRES 9 B 447 ASP GLY MET GLY ILE SER ASP GLU ASN ILE PRO THR SER SEQRES 10 B 447 GLU GLN ASN ILE MET PHE TYR ARG GLY LEU ASN LYS PHE SEQRES 11 B 447 LEU ASN PHE ILE TYR GLU SER ASN ASP SER ARG LYS GLY SEQRES 12 B 447 LEU LYS LYS GLU HIS PHE LEU GLN VAL LEU SER LEU LYS SEQRES 13 B 447 LYS ILE TYR SER LEU ALA LYS LEU SER TYR GLU GLN GLU SEQRES 14 B 447 GLU ALA ALA GLU ASN ASN ALA LEU ALA LYS LEU THR ALA SEQRES 15 B 447 ASP GLY LYS THR LYS ALA ASN ALA ASN SER PHE HIS VAL SEQRES 16 B 447 GLU LYS PRO ILE ASP SER SER ILE VAL GLU GLN PHE LYS SEQRES 17 B 447 SER TRP ASP GLU MET LYS GLY ALA LEU HIS GLN LEU ILE SEQRES 18 B 447 LEU ASP GLU LEU SER ASP LYS ASN VAL ALA LYS ILE SER SEQRES 19 B 447 ALA LEU SER GLN ALA ARG SER ALA GLN LEU LYS PHE LEU SEQRES 20 B 447 GLN THR MET ALA GLU GLN LEU ASP LYS ILE PRO ASN GLN SEQRES 21 B 447 SER LEU GLU PRO SER GLU LYS MET ALA ILE LEU ALA GLY SEQRES 22 B 447 ALA MET TYR ILE VAL ARG GLY GLN ILE ALA GLN GLU TYR SEQRES 23 B 447 GLY LYS ASP PRO LEU SER ASN ASP LYS ILE SER ALA THR SEQRES 24 B 447 VAL ILE HIS THR GLY LEU SER THR ILE LEU HIS ALA ASN SEQRES 25 B 447 ALA ASP CYS CYS GLU ASP LYS GLU VAL LEU ILE ALA ALA SEQRES 26 B 447 ALA ASN LYS PHE ILE ARG HIS MET VAL ILE GLU ARG PRO SEQRES 27 B 447 GLU GLN SER ASN LYS LYS ILE THR LYS GLU SER VAL ARG SEQRES 28 B 447 GLU ASN ASN MET PHE SER ASP ILE ALA GLY PHE GLN LEU SEQRES 29 B 447 ILE SER VAL LEU THR LEU ILE GLN ASN MET ILE LYS THR SEQRES 30 B 447 CYS ARG THR ASP ALA ILE GLU ALA CYS VAL THR LYS ARG SEQRES 31 B 447 LYS GLU GLU LEU GLU ALA LEU LYS PRO LYS LYS GLU GLY SEQRES 32 B 447 TYR SER ILE ALA SER SER VAL THR GLY TYR VAL GLY SER SEQRES 33 B 447 TRP PHE LYS LYS ALA PRO SER MET SER GLU GLU ASP GLU SEQRES 34 B 447 GLU ASP ASP LEU LYS ASP GLN ASN THR ALA GLU GLU THR SEQRES 35 B 447 SER LYS PRO THR VAL HET PO4 A 501 5 HET PO4 A 502 5 HET FLC A 503 18 HET GOL A 504 14 HET PO4 B 501 5 HET FLC B 502 18 HET GOL B 503 14 HETNAM PO4 PHOSPHATE ION HETNAM FLC CITRATE ANION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PO4 3(O4 P 3-) FORMUL 5 FLC 2(C6 H5 O7 3-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 10 HOH *226(H2 O) HELIX 1 AA1 GLU A 11 LYS A 31 1 21 HELIX 2 AA2 LYS A 34 LEU A 38 5 5 HELIX 3 AA3 PRO A 41 LYS A 64 1 24 HELIX 4 AA4 LEU A 68 ASN A 89 1 22 HELIX 5 AA5 LYS A 95 ASN A 98 5 4 HELIX 6 AA6 SER A 99 GLY A 110 1 12 HELIX 7 AA7 THR A 118 LEU A 133 1 16 HELIX 8 AA8 ASN A 134 GLY A 145 5 12 HELIX 9 AA9 SER A 156 LYS A 181 1 26 HELIX 10 AB1 ASN A 191 PHE A 195 5 5 HELIX 11 AB2 ASP A 202 GLN A 208 1 7 HELIX 12 AB3 SER A 211 LYS A 230 1 20 HELIX 13 AB4 LYS A 234 LEU A 238 5 5 HELIX 14 AB5 SER A 239 ILE A 259 1 21 HELIX 15 AB6 GLU A 265 TYR A 288 1 24 HELIX 16 AB7 THR A 301 HIS A 312 1 12 HELIX 17 AB8 CYS A 317 VAL A 336 1 20 HELIX 18 AB9 GLN A 365 ALA A 398 1 34 HELIX 19 AC1 GLU B 11 LYS B 31 1 21 HELIX 20 AC2 LYS B 34 LEU B 38 5 5 HELIX 21 AC3 PRO B 41 LYS B 64 1 24 HELIX 22 AC4 LEU B 68 ASN B 89 1 22 HELIX 23 AC5 LYS B 95 ASN B 98 5 4 HELIX 24 AC6 SER B 99 GLY B 110 1 12 HELIX 25 AC7 THR B 118 LEU B 133 1 16 HELIX 26 AC8 ASN B 134 GLY B 145 5 12 HELIX 27 AC9 SER B 156 LYS B 181 1 26 HELIX 28 AD1 ASN B 191 PHE B 195 5 5 HELIX 29 AD2 ASP B 202 LYS B 210 5 9 HELIX 30 AD3 SER B 211 ASN B 231 1 21 HELIX 31 AD4 LYS B 234 LEU B 238 5 5 HELIX 32 AD5 SER B 239 ILE B 259 1 21 HELIX 33 AD6 GLU B 265 TYR B 288 1 24 HELIX 34 AD7 THR B 301 HIS B 312 1 12 HELIX 35 AD8 ALA B 313 ASP B 316 5 4 HELIX 36 AD9 CYS B 317 VAL B 336 1 20 HELIX 37 AE1 GLN B 365 ALA B 398 1 34 SHEET 1 AA1 2 ILE A 337 GLU A 338 0 SHEET 2 AA1 2 SER A 351 VAL A 352 -1 O SER A 351 N GLU A 338 SHEET 1 AA2 2 ILE B 337 GLU B 338 0 SHEET 2 AA2 2 SER B 351 VAL B 352 -1 O SER B 351 N GLU B 338 CISPEP 1 ASN A 40 PRO A 41 0 5.00 CISPEP 2 ASN B 40 PRO B 41 0 2.41 SITE 1 AC1 10 GLU A 226 LYS A 230 ARG A 242 ALA A 300 SITE 2 AC1 10 THR A 301 VAL A 302 ILE A 303 HOH A 606 SITE 3 AC1 10 HOH A 620 HOH A 671 SITE 1 AC2 5 GLU A 30 ARG A 42 SER A 99 LEU A 100 SITE 2 AC2 5 LEU A 101 SITE 1 AC3 5 PHE A 195 HIS A 196 LYS A 330 ARG A 333 SITE 2 AC3 5 HIS A 334 SITE 1 AC4 4 ASP A 21 ARG A 104 LEU B 227 GLN B 250 SITE 1 AC5 9 GLU B 226 LYS B 230 ARG B 242 THR B 301 SITE 2 AC5 9 VAL B 302 ILE B 303 HOH B 607 HOH B 622 SITE 3 AC5 9 HOH B 627 SITE 1 AC6 14 LYS A 216 LEU A 219 HIS A 220 ILE A 223 SITE 2 AC6 14 GLN A 250 ALA A 253 GLU A 254 ASP A 257 SITE 3 AC6 14 HOH A 602 HOH A 646 GLU B 207 GLN B 208 SITE 4 AC6 14 HIS B 312 ALA B 315 SITE 1 AC7 3 LYS B 216 HIS B 220 ASP B 257 CRYST1 83.840 96.240 151.450 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011927 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010391 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006603 0.00000