HEADER CELL CYCLE 19-APR-16 5JG6 TITLE APC11-UBV SHOWS ROLE OF NONCOVALENT RING-UBIQUITIN INTERACTIONS IN TITLE 2 PROCESSIVE MULTIUBIQUITINATION AND UBIQUITIN CHAIN ELONGATION BY TITLE 3 APC/C COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAPHASE-PROMOTING COMPLEX SUBUNIT 11; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: APC11,CYCLOSOME SUBUNIT 11,HEPATOCELLULAR CARCINOMA- COMPND 5 ASSOCIATED RING FINGER PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: POLYUBIQUITIN-B; COMPND 9 CHAIN: B, C; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANAPC11, HSPC214; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: UBB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RING UBIQUITIN CELL CYCLE ANAPHASE-PROMOTING COMPLEX-CYCLOSOME, CELL KEYWDS 2 CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR N.G.BROWN,W.ZHANG,S.YU,D.J.MILLER,S.S.SIDHU,B.A.SCHULMAN REVDAT 6 27-SEP-23 5JG6 1 REMARK REVDAT 5 08-JAN-20 5JG6 1 REMARK REVDAT 4 20-NOV-19 5JG6 1 REMARK REVDAT 3 27-SEP-17 5JG6 1 REMARK REVDAT 2 06-SEP-17 5JG6 1 REMARK REVDAT 1 15-JUN-16 5JG6 0 JRNL AUTH N.G.BROWN,R.VANDERLINDEN,E.R.WATSON,F.WEISSMANN,A.ORDUREAU, JRNL AUTH 2 K.P.WU,W.ZHANG,S.YU,P.Y.MERCREDI,J.S.HARRISON,I.F.DAVIDSON, JRNL AUTH 3 R.QIAO,Y.LU,P.DUBE,M.R.BRUNNER,C.R.GRACE,D.J.MILLER, JRNL AUTH 4 D.HASELBACH,M.A.JARVIS,M.YAMAGUCHI,D.YANISHEVSKI,G.PETZOLD, JRNL AUTH 5 S.S.SIDHU,B.KUHLMAN,M.W.KIRSCHNER,J.W.HARPER,J.M.PETERS, JRNL AUTH 6 H.STARK,B.A.SCHULMAN JRNL TITL DUAL RING E3 ARCHITECTURES REGULATE MULTIUBIQUITINATION AND JRNL TITL 2 UBIQUITIN CHAIN ELONGATION BY APC/C. JRNL REF CELL V. 165 1440 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27259151 JRNL DOI 10.1016/J.CELL.2016.05.037 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 19400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.3319 - 3.8271 0.99 2731 167 0.1708 0.1922 REMARK 3 2 3.8271 - 3.0382 1.00 2690 141 0.1737 0.2280 REMARK 3 3 3.0382 - 2.6543 1.00 2673 144 0.1930 0.2015 REMARK 3 4 2.6543 - 2.4117 1.00 2653 134 0.1974 0.2326 REMARK 3 5 2.4117 - 2.2388 1.00 2636 140 0.1991 0.2512 REMARK 3 6 2.2388 - 2.1068 0.99 2610 130 0.2039 0.2472 REMARK 3 7 2.1068 - 2.0013 0.91 2402 149 0.2243 0.2797 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2230 REMARK 3 ANGLE : 0.947 2989 REMARK 3 CHIRALITY : 0.041 329 REMARK 3 PLANARITY : 0.005 391 REMARK 3 DIHEDRAL : 13.591 819 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -15.0588 -0.9797 -3.0986 REMARK 3 T TENSOR REMARK 3 T11: 0.1214 T22: 0.1610 REMARK 3 T33: 0.1655 T12: -0.0272 REMARK 3 T13: -0.0336 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.6636 L22: 1.1702 REMARK 3 L33: 1.2695 L12: -0.7571 REMARK 3 L13: -0.8993 L23: 1.0423 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: -0.0223 S13: -0.0154 REMARK 3 S21: -0.0091 S22: -0.0151 S23: 0.0374 REMARK 3 S31: -0.0238 S32: 0.0120 S33: -0.0066 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JG6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19650 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 36.326 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4R2Y AND 1UBQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE PH 4.6, 33% PEG4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.53300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.59650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.53300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.59650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 VAL A 17 REMARK 465 ALA A 18 REMARK 465 ASN A 19 REMARK 465 LYS A 38 REMARK 465 VAL A 39 REMARK 465 PRO A 40 REMARK 465 GLY A 41 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 LYS B 76 REMARK 465 MET B 77 REMARK 465 LYS B 78 REMARK 465 GLY C -5 REMARK 465 SER C -4 REMARK 465 GLY C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 GLY C 0 REMARK 465 LYS C 76 REMARK 465 MET C 77 REMARK 465 LYS C 78 REMARK 465 GLY D 15 REMARK 465 SER D 16 REMARK 465 VAL D 17 REMARK 465 ALA D 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 20 CG OD1 OD2 REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 CYS A 33 SG REMARK 470 ASP A 42 CG OD1 OD2 REMARK 470 ASP A 43 CG OD1 OD2 REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 VAL A 69 CG1 CG2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 LYS C 11 CG CD CE NZ REMARK 470 GLU C 24 CG CD OE1 OE2 REMARK 470 LYS C 48 CG CD CE NZ REMARK 470 ARG C 54 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 20 CG OD1 OD2 REMARK 470 GLU D 21 CG CD OE1 OE2 REMARK 470 LYS D 38 CG CD CE NZ REMARK 470 VAL D 39 CG1 CG2 REMARK 470 LYS D 62 CG CD CE NZ REMARK 470 GLN D 68 CG CD OE1 NE2 REMARK 470 LYS D 83 CG CD CE NZ REMARK 470 GLU D 84 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 128 O HOH C 133 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 46 -113.72 54.57 REMARK 500 ALA C 46 -114.35 55.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 23 SG REMARK 620 2 CYS A 26 SG 109.4 REMARK 620 3 HIS A 56 ND1 103.9 96.2 REMARK 620 4 CYS A 59 SG 117.4 112.8 114.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 34 SG REMARK 620 2 CYS A 37 SG 113.6 REMARK 620 3 CYS A 44 SG 109.5 115.6 REMARK 620 4 HIS A 58 ND1 110.8 96.4 110.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 103 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 51 SG REMARK 620 2 HIS A 53 ND1 108.0 REMARK 620 3 CYS A 73 SG 109.7 113.1 REMARK 620 4 CYS A 76 SG 104.1 110.6 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 23 SG REMARK 620 2 CYS D 26 SG 112.0 REMARK 620 3 HIS D 56 ND1 106.1 96.9 REMARK 620 4 CYS D 59 SG 119.0 106.7 113.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 103 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 34 SG REMARK 620 2 CYS D 37 SG 116.4 REMARK 620 3 CYS D 44 SG 106.7 114.7 REMARK 620 4 HIS D 58 ND1 114.6 96.2 108.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 51 SG REMARK 620 2 HIS D 53 ND1 106.3 REMARK 620 3 CYS D 73 SG 108.2 107.4 REMARK 620 4 CYS D 76 SG 109.5 112.3 112.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 103 DBREF 5JG6 A 17 84 UNP Q9NYG5 APC11_HUMAN 17 84 DBREF 5JG6 B 0 78 UNP P0CG47 UBB_HUMAN 76 154 DBREF 5JG6 C 0 78 UNP P0CG47 UBB_HUMAN 76 154 DBREF 5JG6 D 17 84 UNP Q9NYG5 APC11_HUMAN 17 84 SEQADV 5JG6 GLY A 15 UNP Q9NYG5 EXPRESSION TAG SEQADV 5JG6 SER A 16 UNP Q9NYG5 EXPRESSION TAG SEQADV 5JG6 GLY B -5 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 SER B -4 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 GLY B -3 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 GLY B -2 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 SER B -1 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 LEU B 4 UNP P0CG47 PHE 80 CONFLICT SEQADV 5JG6 PRO B 8 UNP P0CG47 LEU 84 CONFLICT SEQADV 5JG6 ARG B 9 UNP P0CG47 THR 85 CONFLICT SEQADV 5JG6 ILE B 42 UNP P0CG47 ARG 118 CONFLICT SEQADV 5JG6 PHE B 44 UNP P0CG47 ILE 120 CONFLICT SEQADV 5JG6 VAL B 47 UNP P0CG47 GLY 123 CONFLICT SEQADV 5JG6 ARG B 49 UNP P0CG47 GLN 125 CONFLICT SEQADV 5JG6 LYS B 64 UNP P0CG47 GLU 140 CONFLICT SEQADV 5JG6 SER B 66 UNP P0CG47 THR 142 CONFLICT SEQADV 5JG6 LEU B 68 UNP P0CG47 HIS 144 CONFLICT SEQADV 5JG6 ALA B 70 UNP P0CG47 VAL 146 CONFLICT SEQADV 5JG6 MET B 71 UNP P0CG47 LEU 147 CONFLICT SEQADV 5JG6 VAL B 73 UNP P0CG47 LEU 149 CONFLICT SEQADV 5JG6 PRO B 74 UNP P0CG47 ARG 150 CONFLICT SEQADV 5JG6 LYS B 76 UNP P0CG47 GLY 152 CONFLICT SEQADV 5JG6 LYS B 78 UNP P0CG47 GLN 154 CONFLICT SEQADV 5JG6 GLY C -5 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 SER C -4 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 GLY C -3 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 GLY C -2 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 SER C -1 UNP P0CG47 EXPRESSION TAG SEQADV 5JG6 LEU C 4 UNP P0CG47 PHE 80 CONFLICT SEQADV 5JG6 PRO C 8 UNP P0CG47 LEU 84 CONFLICT SEQADV 5JG6 ARG C 9 UNP P0CG47 THR 85 CONFLICT SEQADV 5JG6 ILE C 42 UNP P0CG47 ARG 118 CONFLICT SEQADV 5JG6 PHE C 44 UNP P0CG47 ILE 120 CONFLICT SEQADV 5JG6 VAL C 47 UNP P0CG47 GLY 123 CONFLICT SEQADV 5JG6 ARG C 49 UNP P0CG47 GLN 125 CONFLICT SEQADV 5JG6 LYS C 64 UNP P0CG47 GLU 140 CONFLICT SEQADV 5JG6 SER C 66 UNP P0CG47 THR 142 CONFLICT SEQADV 5JG6 LEU C 68 UNP P0CG47 HIS 144 CONFLICT SEQADV 5JG6 ALA C 70 UNP P0CG47 VAL 146 CONFLICT SEQADV 5JG6 MET C 71 UNP P0CG47 LEU 147 CONFLICT SEQADV 5JG6 VAL C 73 UNP P0CG47 LEU 149 CONFLICT SEQADV 5JG6 PRO C 74 UNP P0CG47 ARG 150 CONFLICT SEQADV 5JG6 LYS C 76 UNP P0CG47 GLY 152 CONFLICT SEQADV 5JG6 LYS C 78 UNP P0CG47 GLN 154 CONFLICT SEQADV 5JG6 GLY D 15 UNP Q9NYG5 EXPRESSION TAG SEQADV 5JG6 SER D 16 UNP Q9NYG5 EXPRESSION TAG SEQRES 1 A 70 GLY SER VAL ALA ASN ASP GLU ASN CYS GLY ILE CYS ARG SEQRES 2 A 70 MET ALA PHE ASN GLY CYS CYS PRO ASP CYS LYS VAL PRO SEQRES 3 A 70 GLY ASP ASP CYS PRO LEU VAL TRP GLY GLN CYS SER HIS SEQRES 4 A 70 CYS PHE HIS MET HIS CYS ILE LEU LYS TRP LEU HIS ALA SEQRES 5 A 70 GLN GLN VAL GLN GLN HIS CYS PRO MET CYS ARG GLN GLU SEQRES 6 A 70 TRP LYS PHE LYS GLU SEQRES 1 B 84 GLY SER GLY GLY SER GLY MET GLN ILE LEU VAL LYS THR SEQRES 2 B 84 PRO ARG GLY LYS THR ILE THR LEU GLU VAL GLU PRO SER SEQRES 3 B 84 ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP LYS SEQRES 4 B 84 GLU GLY ILE PRO PRO ASP GLN GLN ILE LEU PHE PHE ALA SEQRES 5 B 84 VAL LYS ARG LEU GLU ASP GLY ARG THR LEU SER ASP TYR SEQRES 6 B 84 ASN ILE GLN LYS LYS SER SER LEU LEU LEU ALA MET ARG SEQRES 7 B 84 VAL PRO GLY LYS MET LYS SEQRES 1 C 84 GLY SER GLY GLY SER GLY MET GLN ILE LEU VAL LYS THR SEQRES 2 C 84 PRO ARG GLY LYS THR ILE THR LEU GLU VAL GLU PRO SER SEQRES 3 C 84 ASP THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP LYS SEQRES 4 C 84 GLU GLY ILE PRO PRO ASP GLN GLN ILE LEU PHE PHE ALA SEQRES 5 C 84 VAL LYS ARG LEU GLU ASP GLY ARG THR LEU SER ASP TYR SEQRES 6 C 84 ASN ILE GLN LYS LYS SER SER LEU LEU LEU ALA MET ARG SEQRES 7 C 84 VAL PRO GLY LYS MET LYS SEQRES 1 D 70 GLY SER VAL ALA ASN ASP GLU ASN CYS GLY ILE CYS ARG SEQRES 2 D 70 MET ALA PHE ASN GLY CYS CYS PRO ASP CYS LYS VAL PRO SEQRES 3 D 70 GLY ASP ASP CYS PRO LEU VAL TRP GLY GLN CYS SER HIS SEQRES 4 D 70 CYS PHE HIS MET HIS CYS ILE LEU LYS TRP LEU HIS ALA SEQRES 5 D 70 GLN GLN VAL GLN GLN HIS CYS PRO MET CYS ARG GLN GLU SEQRES 6 D 70 TRP LYS PHE LYS GLU HET ZN A 101 1 HET ZN A 102 1 HET ZN A 103 1 HET ZN D 101 1 HET ZN D 102 1 HET ZN D 103 1 HETNAM ZN ZINC ION FORMUL 5 ZN 6(ZN 2+) FORMUL 11 HOH *116(H2 O) HELIX 1 AA1 MET A 57 GLN A 67 1 11 HELIX 2 AA2 THR B 22 GLY B 35 1 14 HELIX 3 AA3 PRO B 37 ASP B 39 5 3 HELIX 4 AA4 LEU B 56 ASN B 60 5 5 HELIX 5 AA5 THR C 22 GLY C 35 1 14 HELIX 6 AA6 PRO C 37 ASP C 39 5 3 HELIX 7 AA7 LEU C 56 ASN C 60 5 5 HELIX 8 AA8 MET D 57 GLN D 67 1 11 SHEET 1 AA1 2 LEU A 46 TRP A 48 0 SHEET 2 AA1 2 CYS A 54 HIS A 56 -1 O PHE A 55 N VAL A 47 SHEET 1 AA2 5 THR B 12 VAL B 17 0 SHEET 2 AA2 5 MET B 1 LYS B 6 -1 N MET B 1 O VAL B 17 SHEET 3 AA2 5 SER B 66 MET B 71 1 O LEU B 69 N LYS B 6 SHEET 4 AA2 5 GLN B 41 PHE B 45 -1 N ILE B 42 O ALA B 70 SHEET 5 AA2 5 LYS B 48 ARG B 49 -1 O LYS B 48 N PHE B 45 SHEET 1 AA3 5 THR C 12 GLU C 16 0 SHEET 2 AA3 5 GLN C 2 LYS C 6 -1 N VAL C 5 O ILE C 13 SHEET 3 AA3 5 SER C 66 MET C 71 1 O LEU C 67 N LEU C 4 SHEET 4 AA3 5 GLN C 41 PHE C 45 -1 N ILE C 42 O ALA C 70 SHEET 5 AA3 5 LYS C 48 ARG C 49 -1 O LYS C 48 N PHE C 45 SHEET 1 AA4 2 LEU D 46 TRP D 48 0 SHEET 2 AA4 2 CYS D 54 HIS D 56 -1 O PHE D 55 N VAL D 47 LINK SG CYS A 23 ZN ZN A 101 1555 1555 2.29 LINK SG CYS A 26 ZN ZN A 101 1555 1555 2.39 LINK SG CYS A 34 ZN ZN A 102 1555 1555 2.30 LINK SG CYS A 37 ZN ZN A 102 1555 1555 2.45 LINK SG CYS A 44 ZN ZN A 102 1555 1555 2.30 LINK SG CYS A 51 ZN ZN A 103 1555 1555 2.26 LINK ND1 HIS A 53 ZN ZN A 103 1555 1555 2.03 LINK ND1 HIS A 56 ZN ZN A 101 1555 1555 2.03 LINK ND1 HIS A 58 ZN ZN A 102 1555 1555 2.03 LINK SG CYS A 59 ZN ZN A 101 1555 1555 2.24 LINK SG CYS A 73 ZN ZN A 103 1555 1555 2.37 LINK SG CYS A 76 ZN ZN A 103 1555 1555 2.33 LINK SG CYS D 23 ZN ZN D 101 1555 1555 2.37 LINK SG CYS D 26 ZN ZN D 101 1555 1555 2.31 LINK SG CYS D 34 ZN ZN D 103 1555 1555 2.26 LINK SG CYS D 37 ZN ZN D 103 1555 1555 2.34 LINK SG CYS D 44 ZN ZN D 103 1555 1555 2.35 LINK SG CYS D 51 ZN ZN D 102 1555 1555 2.34 LINK ND1 HIS D 53 ZN ZN D 102 1555 1555 2.05 LINK ND1 HIS D 56 ZN ZN D 101 1555 1555 2.15 LINK ND1 HIS D 58 ZN ZN D 103 1555 1555 2.04 LINK SG CYS D 59 ZN ZN D 101 1555 1555 2.28 LINK SG CYS D 73 ZN ZN D 102 1555 1555 2.26 LINK SG CYS D 76 ZN ZN D 102 1555 1555 2.32 SITE 1 AC1 4 CYS A 23 CYS A 26 HIS A 56 CYS A 59 SITE 1 AC2 4 CYS A 34 CYS A 37 CYS A 44 HIS A 58 SITE 1 AC3 4 CYS A 51 HIS A 53 CYS A 73 CYS A 76 SITE 1 AC4 4 CYS D 23 CYS D 26 HIS D 56 CYS D 59 SITE 1 AC5 4 CYS D 51 HIS D 53 CYS D 73 CYS D 76 SITE 1 AC6 4 CYS D 34 CYS D 37 CYS D 44 HIS D 58 CRYST1 131.066 35.193 72.768 90.00 120.42 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007630 0.000000 0.004481 0.00000 SCALE2 0.000000 0.028415 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015937 0.00000